{"text_format":"3","workbook":"xlsx","n_sheets":1,"sheets":["TSJs and TSTs"],"read":"whole","date_system":"1900"}

{"sheet":"TSJs and TSTs","index":0,"n_rows":32849,"n_cols":20,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["Junction","Transcript_loc","RjunBase_JunctionID","Gene.symbol","Gene.type","Tumor.associated.gene","Tumor.median","NT.median","Normal.median","Tumor.frequency","tumor_sample_number","NT.frequency","NT_sample_number","Normal.frequency.sample.number.","Tumor.specific.types","Annotation","Doner_TE_anno","Accepter_TE_anno","Doner_anno","Accepter_anno"]
["chr1:183613789|183616001:+","chr1:183613388|183613789:+_chr1:183616001|183616179:+_chr1:183618932|183619328:+","UN_RGL1_UP_LS24","RGL1","protein_coding","no",5.672,0,0,0.043,443,0,0,"0(0)","BLCA;COAD;ESCA;HNSC;LUSC;READ;STAD","no","TE_intersect_:183613648|chr1|183613648|183617077|HERVH-int:ERV1:LTR|102|+","TE_intersect_:183613648|chr1|183613648|183617077|HERVH-int:ERV1:LTR|102|+","NA","NA"]
["chr2:118863119|118969160:+","chr2:118850134|118850552:+_chr2:118860585|118860709:+_chr2:118863067|118863119:+_chr2:118969160|118969261:+_chr2:118970114|118970338:+_chr2:118971499|118971534:+_chr2:118974333|118974440:+_chr2:118974521|118974565:+_chr2:118977471|118977515:+_chr2:118977828|118977935:+_chr2:118981409|118981507:+_chr2:118981621|118981656:+_chr2:118982156|118982254:+_chr2:118982348|118982410:+_chr2:118990589|118990633:+_chr2:118991777|118991875:+_chr2:118992432|118992476:+_chr2:118993124|118993300:+_chr2:118994387|118994658:+","UN_RN7SL468P_UP_LS04","RN7SL468P","misc_RNA","no",5.667,0,0,0.005,47,0,0,"0(0)","BRCA;GBM","no","NA","NA","NA","exon_intersect_chr2:118969160|118969261"]
["chr2:118860709|118863067:+","chr2:118850134|118850552:+_chr2:118860585|118860709:+_chr2:118863067|118863119:+_chr2:118969160|118969261:+_chr2:118970114|118970338:+_chr2:118971499|118971534:+_chr2:118974333|118974440:+_chr2:118974521|118974565:+_chr2:118977471|118977515:+_chr2:118977828|118977935:+_chr2:118981409|118981507:+_chr2:118981621|118981656:+_chr2:118982156|118982254:+_chr2:118982348|118982410:+_chr2:118990589|118990633:+_chr2:118991777|118991875:+_chr2:118992432|118992476:+_chr2:118993124|118993300:+_chr2:118994387|118994658:+","UN_MARCO_UP_LS118","MARCO","protein_coding","no",4.803,0,0,0.006,63,0,0,"0(0)","BRCA;GBM","no","NA","NA","NA","NA"]
["chr2:118850552|118860585:+","chr2:118850462|118850552:+_chr2:118860585|118860709:+_chr2:118863067|118863119:+_chr2:118969160|118969261:+_chr2:118970114|118970338:+_chr2:118971499|118971534:+_chr2:118974333|118974440:+_chr2:118974521|118974565:+_chr2:118977471|118977515:+_chr2:118977828|118977935:+_chr2:118981409|118981507:+_chr2:118981621|118981656:+_chr2:118982156|118982254:+_chr2:118982348|118982410:+_chr2:118990589|118990633:+_chr2:118991777|118991875:+_chr2:118992432|118992476:+_chr2:118993124|118993300:+_chr2:118994387|118994658:+","UN_MARCO_UP_LS114","MARCO","protein_coding","no",3.203,0,0,0.005,56,0,0,"0(0)","BRCA;GBM","no","NA","NA","NA","NA"]
["chrX:87724212|87728444:-","chrX:87708337|87708380:-_chrX:87724079|87724212:-_chrX:87728444|87728755:-","UN_Z83818.2_LS08","Z83818.2","lincRNA","no",25.928,0.558,0,0.146,1504,0.014,0,"0(0)","BLCA;KIRP;LIHC;LUAD;LUSC;PCPG;READ;SARC;STAD;UCEC","no","TE_intersect_:87727773|chrX|87727773|87728475|MER61-int:ERV1:LTR|182|-","TE_intersect_:87724011|chrX|87724011|87727669|MER61-int:ERV1:LTR|93|-","NA","NA"]
["chr8:111027433|111040109:-","chr8:110968226|110969858:-_chr8:111003414|111003450:-_chr8:111004661|111004769:-_chr8:111005530|111005649:-_chr8:111014904|111015032:-_chr8:111027306|111027433:-_chr8:111040109|111040411:-","UN_LINC01608_UP_LS02","LINC01608","lincRNA","no",6.393,0,0,0.019,199,0,0,"0(0)","BLCA;LIHC","no","TE_intersect_:111040109|chr8|111040109|111041401|LTR12C:ERV1:LTR|80|-"," ","NA","NA"]
["chr3:147394630|147412518:+","chr3:147393895|147394630:+_chr3:147412518|147412681:+_chr3:147413354|147413680:+","UN_ZIC1_LS25","ZIC1","protein_coding","yes",6.684,0,0,0.051,528,0,0,"0(0)","BRCA;CHOL;ESCA;GBM;LIHC;SARC","no","NA","NA","intron_intersect_chr3:147393942|147395852","exon_intersect_chr3:147412518|147412681"]
["chr1:168379782|168580063:+","chr1:168354358|168354910:+_chr1:168379609|168379782:+_chr1:168580063|168580177:+_chr1:168581052|168582077:+","UN_LINC00626_UP_LS15","LINC00626","lincRNA","no",6.238,0,0,0.026,267,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;STAD","no","TE_intersect_:168379401|chr1|168379401|168379807|MLT1A:ERVL-MaLR:LTR|215|+","NA","NA","exon_intersect_chr1:168580063|168580177"]
["chr19:1740328|1745207:-","chr19:1734360|1737516:-_chr19:1738955|1739049:-_chr19:1740186|1740328:-_chr19:1745207|1745310:-_chr19:1745509|1745960:-","UN_TCF3_UP_LS28","TCF3","protein_coding","yes",4.304,0,0,0.009,91,0,0,"0(0)","ESCA;PAAD;STAD","no","NA","TE_intersect_:1740149|chr19|1740149|1740388|MLT1E1A:ERVL-MaLR:LTR|301|-","NA","NA"]
["chr4:49161357|49163488:+","chr4:49161281|49161357:+_chr4:49163488|49163546:+_chr4:49254538|49254660:+_chr4:49255668|49256620:+","UN_AC118282.4_UP_LS265","AC118282.4","TEC","yes",3.704,0,0,0.04,407,0,0,"0(0)","BLCA;LIHC;LUSC;PCPG;SARC","no","NA","NA","NA","NA"]
["chr16:86278681|86280831:+","chr16:86278087|86278681:+_chr16:86280831|86281028:+","UN_LINC01081_LS45","LINC01081","lincRNA","no",8.462,0,0,0.011,113,0,0,"0(0)","COAD;ESCA;READ;STAD","no","TE_intersect_:86278535|chr16|86278535|86279150|HERVH-int:ERV1:LTR|178|+","TE_intersect_:86280229|chr16|86280229|86280840|HERVH-int:ERV1:LTR|63|+","NA","NA"]
["chr1:100126764|100132750:-","chr1:100083546|100085434:-_chr1:100085536|100085630:-_chr1:100088139|100088236:-_chr1:100102955|100103083:-_chr1:100105767|100105903:-_chr1:100106912|100106993:-_chr1:100107374|100107553:-_chr1:100107628|100107717:-_chr1:100107810|100108004:-_chr1:100110292|100110483:-_chr1:100119018|100119137:-_chr1:100120394|100120459:-_chr1:100121378|100121549:-_chr1:100122380|100123289:-_chr1:100125882|100125942:-_chr1:100126652|100126764:-_chr1:100132750|100132995:-","UN_SASS6_LS0017","SASS6","protein coding gene","no",1.13,0,0,0.01,99,0,0,"0(0)","ESCA;STAD","no","NA","TE_intersect_:100126495|chr1|100126495|100126798|AluSz6:Alu:SINE|168|+","exon_intersect_chr1:100132750|100132955","intron_intersect_chr1:100125942|100132750"]
["chr1:100126768|100132750:-","chr1:100083555|100085434:-_chr1:100085536|100085630:-_chr1:100088139|100088236:-_chr1:100102955|100103083:-_chr1:100105767|100105903:-_chr1:100106912|100106993:-_chr1:100107374|100107553:-_chr1:100107628|100107717:-_chr1:100107810|100108004:-_chr1:100110292|100110483:-_chr1:100119018|100119137:-_chr1:100120394|100120459:-_chr1:100121378|100121549:-_chr1:100122380|100122484:-_chr1:100123210|100123289:-_chr1:100125882|100125942:-_chr1:100126652|100126768:-_chr1:100132750|100132967:-","UN_SASS6_LS0018","SASS6","protein coding gene","no",0.94,0,0,0.006,58,0,0,"0(0)","STAD","no","NA","TE_intersect_:100126495|chr1|100126495|100126798|AluSz6:Alu:SINE|168|+","exon_intersect_chr1:100132750|100132955","intron_intersect_chr1:100125942|100132750"]
["chr1:100287203|100287819:+","chr1:100266289|100266420:+_chr1:100266524|100266624:+_chr1:100267500|100267538:+_chr1:100268152|100268295:+_chr1:100270557|100270680:+_chr1:100273394|100273452:+_chr1:100274824|100274965:+_chr1:100275599|100275723:+_chr1:100277258|100277316:+_chr1:100285228|100285322:+_chr1:100287099|100287203:+_chr1:100287819|100292769:+","UN_RTCA_LS0023","RTCA","protein coding gene","no",3.85,0,0,0.004,35,0,0,"0(0)","OV","no","NA","TE_intersect_:100287791|chr1|100287791|100288093|AluSx:Alu:SINE|156|-","intron_intersect_chr1:100287203|100291403","intron_intersect_chr1:100287203|100291403"]
["chr1:100325771|100337025:+","chr1:100325695|100325771:+_chr1:100337025|100337317:+","UN_AC104457.2_UP_LS0001","AC104457.2","lncRNA gene","no",2.57,0,0,0.003,32,0,0,"0(0)","OV","no","NA","TE_intersect_:100336940|chr1|100336940|100337403|MER21C:ERVL:LTR|213|+","NA","NA"]
["chr1:100325853|100337025:+","chr1:100325680|100325853:+_chr1:100337025|100337317:+","UN_AC104457.2_UP_LS0002","AC104457.2","lncRNA gene","no",4.19,0,0,0.019,186,0,0,"0(0)","CESC;OV;UCEC","no","NA","TE_intersect_:100336940|chr1|100336940|100337403|MER21C:ERVL:LTR|213|+","NA","NA"]
["chr1:100363225|100377546:+","chr1:100363152|100363225:+_chr1:100377546|100377621:+_chr1:100390732|100390824:+_chr1:100424222|100424301:+_chr1:100439932|100439998:+_chr1:100442934|100442996:+_chr1:100455405|100455492:+_chr1:100462651|100462881:+_chr1:100467956|100468094:+_chr1:100484292|100484451:+_chr1:100494818|100494930:+_chr1:100496002|100496049:+_chr1:100498085|100498207:+_chr1:100498929|100499262:+_chr1:100518251|100520277:+","CDC14A_LS004","CDC14A","protein coding gene","no",2.31,0,0,0.013,121,0,0,"0(0)","ESCA;HNSC;TGCT","yes","TE_intersect_:100362798|chr1|100362798|100363434|LTR9:ERV1:LTR|169|-","NA","intron_intersect_chr1:100353852|100377546","exon_intersect_chr1:100377546|100377621"]
["chr1:100484451|100485826:+","chr1:100352600|100353003:+_chr1:100353762|100353852:+_chr1:100377546|100377621:+_chr1:100390732|100390824:+_chr1:100439932|100439998:+_chr1:100442934|100442996:+_chr1:100455405|100455492:+_chr1:100462651|100462881:+_chr1:100467956|100468094:+_chr1:100484292|100484451:+_chr1:100485826|100485901:+_chr1:100494818|100494930:+_chr1:100496002|100496049:+_chr1:100498085|100520277:+","CDC14A_LS020","CDC14A","protein coding gene","no",2.04,0.08,0,0.002,18,0.001,1,"0(0)","LAML","yes","NA","NA","exon_intersect_chr1:100484292|100484744","intron_intersect_chr1:100484744|100485916"]
["chr1:100485901|100494818:+","chr1:100420105|100424301:+_chr1:100439932|100439998:+_chr1:100442934|100442996:+_chr1:100455405|100455492:+_chr1:100462651|100462881:+_chr1:100467956|100468094:+_chr1:100484292|100485901:+_chr1:100494818|100494930:+_chr1:100496002|100496049:+_chr1:100498085|100498207:+_chr1:100498929|100520277:+","CDC14A_LS022","CDC14A","protein coding gene","no",2.25,0.05,0,0.004,41,0.001,1,"0(0)","LAML","yes","NA","NA","intron_intersect_chr1:100484744|100485916","exon_intersect_chr1:100494818|100494930"]
["chr1:100622874|100640533:+","chr1:100622640|100622874:+_chr1:100640533|100641862:+","UN_AC099670.2_UP_LS0002","AC099670.2","pseudogene","no",2.81,0,0,0.006,61,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:100640452|chr1|100640452|100640873|MLT1F:ERVL-MaLR:LTR|284|-","NA","exon_intersect_chr1:100640489|100640613"]
["chr1:100748114|100749491:+","chr1:100747875|100748114:+_chr1:100749491|100751931:+","UN_AC104506.1_UP_LS0003","AC104506.1","lncRNA gene","no",2.24,0,0,0.005,47,0,0,"0(0)","GBM;LGG","no","NA","NA","NA","NA"]
["chr1:100906669|100906852:+","chr1:100896082|100896342:+_chr1:100896570|100896671:+_chr1:100906553|100906669:+_chr1:100906852|100906965:+_chr1:100911063|100911150:+_chr1:100912112|100912238:+_chr1:100913663|100913806:+_chr1:100918077|100918127:+_chr1:100921706|100921841:+_chr1:100961828|100961918:+_chr1:100965769|100965918:+_chr1:100974810|100981753:+","UN_SLC30A7_LS0009","SLC30A7","protein coding gene","no",1,0,0,0.003,31,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:100896671|100906852","exon_intersect_chr1:100906852|100906965"]
["chr1:100973274|100974810:+","chr1:100961828|100961918:+_chr1:100965769|100965918:+_chr1:100973124|100973274:+_chr1:100974810|100974902:+_chr1:100975219|100981751:+","UN_SLC30A7_LS0025","SLC30A7","protein coding gene","no",1.44,0,0,0.003,31,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:100972658|100974810","exon_intersect_chr1:100974810|100974998"]
["chr1:100992754|100995110:-","chr1:100990358|100990631:-_chr1:100992637|100992754:-_chr1:100995110|100995149:-_chr1:101001467|101001587:-_chr1:101013710|101013818:-_chr1:101021641|101021765:-_chr1:101025309|101025466:-_chr1:101025683|101025753:-","UN_DPH5_LS0004","DPH5","protein coding gene","no",7.91,0,0,0.008,72,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:100995110|100995150","intron_intersect_chr1:100992740|100995110"]
["chr1:101075716|101086852:+","chr1:101075653|101075716:+_chr1:101086852|101087265:+","UN_AC093157.1_LS0023","AC093157.1","lncRNA gene","no",2.87,0,0,0.012,118,0,0,"0(0)","ESCA;GBM;OV;STAD","no","NA","NA","intron_intersect_chr1:101075716|101077363","exon_intersect_chr1:101086852|101087268"]
["chr1:10108459|10117459:+","chr1:10033274|10033694:+_chr1:10072028|10072214:+_chr1:10095461|10095596:+_chr1:10101108|10101195:+_chr1:10102948|10103092:+_chr1:10105516|10108459:+_chr1:10117459|10117600:+_chr1:10119513|10119613:+_chr1:10121962|10122076:+_chr1:10126794|10126877:+_chr1:10129392|10129448:+_chr1:10130500|10130616:+_chr1:10130715|10130813:+_chr1:10132369|10132482:+_chr1:10134988|10135186:+_chr1:10137067|10137205:+_chr1:10144940|10145039:+","UN_UBE4B_LS0026","UBE4B","protein coding gene","yes",1.63,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:10107374|10117459","exon_intersect_chr1:10117459|10117600"]
["chr1:101371523|101389670:+","chr1:101371420|101371523:+_chr1:101389670|101389792:+_chr1:101394263|101394415:+_chr1:101397347|101397462:+_chr1:101399793|101399898:+","UN_LINC01307_LS0004","LINC01307","lncRNA gene","no",2.9,0,0,0.002,20,0,0,"0(0)","DLBC;THYM","no","NA","TE_intersect_:101389657|chr1|101389657|101389777|THE1B:ERVL-MaLR:LTR|83|-","intron_intersect_chr1:101350185|101377258","exon_intersect_chr1:101389670|101390303"]
["chr1:101371523|101394263:+","chr1:101371390|101371523:+_chr1:101394263|101396768:+","UN_LINC01709_UP_LS0001","LINC01709","lncRNA gene","no",2.46,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","TE_intersect_:101394024|chr1|101394024|101394557|MLT1G3:ERVL-MaLR:LTR|246|+","intron_intersect_chr1:101350185|101377258","NA"]
["chr1:101394415|101397347:+","chr1:101371420|101371523:+_chr1:101389670|101389792:+_chr1:101394263|101394415:+_chr1:101397347|101397462:+_chr1:101399793|101399898:+","UN_LINC01709_UP_LS0003","LINC01709","lncRNA gene","no",6.58,0,0,0.003,29,0,0,"0(0)","THYM","no","TE_intersect_:101394024|chr1|101394024|101394557|MLT1G3:ERVL-MaLR:LTR|246|+","NA","NA","NA"]
["chr1:101397462|101399793:+","chr1:101371420|101371523:+_chr1:101389670|101389792:+_chr1:101394263|101394415:+_chr1:101397347|101397462:+_chr1:101399793|101399898:+","UN_LINC01709_UP_LS0004","LINC01709","lncRNA gene","no",10.45,0,0,0.003,28,0,0,"0(0)","THYM","no","NA","TE_intersect_:101399767|chr1|101399767|101399836|AluJo:Alu:SINE|159|-","NA","NA"]
["chr1:1014264|1014299:-","chr1:1014114|1014264:-_chr1:1014299|1014439:-_chr1:1032984|1032994:-","UN_ISG15_LS0038","ISG15","protein coding gene","yes",21.77,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1013984|1014541","exon_intersect_chr1:1013984|1014541"]
["chr1:1014298|1014404:-","chr1:1014177|1014298:-_chr1:1014404|1014540:-","UN_ISG15_LS0042","ISG15","protein coding gene","yes",4.63,0,0,0.01,93,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","exon_intersect_chr1:1013984|1014541","exon_intersect_chr1:1013984|1014541"]
["chr1:1014433|1041351:-","chr1:1014053|1014157:-_chr1:1014218|1014433:-_chr1:1041351|1041364:-","UN_AL645608.1_UP_LS0003","AL645608.1","lncRNA gene","no",9.34,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1041173|1041397","exon_intersect_chr1:1013984|1014541"]
["chr1:101786387|101786497:+","chr1:101786249|101786387:+_chr1:101786497|101786690:+","UN_RPSAP19_LS0004","RPSAP19","pseudogene","no",1.47,0.05,0,0.004,40,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:101786340|101787219","exon_intersect_chr1:101786340|101787219"]
["chr1:101786496|101786629:+","chr1:101786257|101786496:+_chr1:101786629|101786721:+","UN_RPSAP19_LS0024","RPSAP19","pseudogene","no",0.95,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:101786340|101787219","exon_intersect_chr1:101786340|101787219"]
["chr1:102389610|102393408:-","chr1:102199378|102199997:-_chr1:102310270|102310328:-_chr1:102387205|102387251:-_chr1:102387362|102387421:-_chr1:102388535|102388629:-_chr1:102389494|102389610:-_chr1:102393408|102393582:-","UN_OLFM3_UP_LS0008","OLFM3","protein coding gene","no",3.01,0,0,0.005,49,0,0,"0(0)","LIHC","no","TE_intersect_:102393081|chr1|102393081|102393427|L1MEf:L1:LINE|295|+","NA","NA","exon_intersect_chr1:102389494|102389630"]
["chr1:102933856|102945290:+","chr1:102933622|102933856:+_chr1:102945290|102945415:+","UN_COL11A1_LS0010","COL11A1","protein coding gene","no",3.11,0,0,0.008,79,0,0,"0(0)","OV;THYM","no","TE_intersect_:102928102|chr1|102928102|102934113|L1PA2:L1:LINE|28|-","TE_intersect_:102945287|chr1|102945287|102945462|MSTD:ERVL-MaLR:LTR|222|+","intron_intersect_chr1:102923389|102934449","intron_intersect_chr1:102940434|102946849"]
["chr1:102933856|102962163:+","chr1:102933654|102933856:+_chr1:102962163|102962350:+_chr1:102997816|102997973:+_chr1:103004113|103004196:+_chr1:103075426|103077462:+","UN_COL11A1_LS0011","COL11A1","protein coding gene","no",2.33,0,0,0.021,200,0,0,"0(0)","BLCA;ESCA;LUSC;OV;THYM","no","TE_intersect_:102928102|chr1|102928102|102934113|L1PA2:L1:LINE|28|-","NA","intron_intersect_chr1:102923389|102934449","intron_intersect_chr1:102961919|102962176"]
["chr1:102962350|103004113:+","chr1:102933643|102933856:+_chr1:102962163|102962350:+_chr1:103004113|103004196:+_chr1:103103962|103104007:+","UN_COL11A1_LS0014","COL11A1","protein coding gene","no",2.71,0,0,0.004,43,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:102962265|102962653","intron_intersect_chr1:103003268|103004444"]
["chr1:103004196|103075426:+","chr1:102933654|102933856:+_chr1:102962163|102962350:+_chr1:102997816|102997973:+_chr1:103004113|103004196:+_chr1:103075426|103077462:+","UN_COL11A1_LS0024","COL11A1","protein coding gene","no",2.71,0,0,0.013,126,0,0,"0(0)","BLCA;LUSC;THYM","no","NA","NA","intron_intersect_chr1:103003268|103004444","intron_intersect_chr1:103074780|103078658"]
["chr1:103004196|103103962:+","chr1:102933587|102933856:+_chr1:102962163|102962350:+_chr1:102997816|102997973:+_chr1:103004113|103004196:+_chr1:103103962|103104069:+_chr1:103108091|103108253:+_chr1:103108360|103108973:+","UN_COL11A1_LS0025","COL11A1","protein coding gene","no",2.99,0,0,0.005,48,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:103003268|103004444","intron_intersect_chr1:103100704|103108073"]
["chr1:103025952|103026216:-","chr1:102876468|102878165:-_chr1:102879683|102879916:-_chr1:102881697|102881765:-_chr1:102883199|102883311:-_chr1:102886807|102887056:-_chr1:102888577|102888630:-_chr1:102888723|102888758:-_chr1:102888866|102888919:-_chr1:102889455|102889562:-_chr1:102890451|102890504:-_chr1:102898125|102898178:-_chr1:102898666|102898773:-_chr1:102898941|102898994:-_chr1:102912159|102912212:-_chr1:102913637|102913690:-_chr1:102914352|102914405:-_chr1:102914704|102914811:-_chr1:102915631|102915684:-_chr1:102920311|102920364:-_chr1:102921518|102921571:-_chr1:102923336|102923389:-_chr1:102934449|102934556:-_chr1:102935060|102935113:-_chr1:102939035|102939088:-_chr1:102940327|102940434:-_chr1:102946849|102946956:-_chr1:102961866|102961919:-_chr1:102962176|102962265:-_chr1:102962653|102962760:-_chr1:102965487|102965540:-_chr1:102970219|102970272:-_chr1:102974830|102974883:-_chr1:102978708|102978752:-_chr1:102978860|102978913:-_chr1:102979060|102979104:-_chr1:102979382|102979435:-_chr1:102984138|102984191:-_chr1:102987633|102987740:-_chr1:102989518|102989571:-_chr1:102995864|102995908:-_chr1:102995989|102996042:-_chr1:102997080|102997124:-_chr1:102998310|102998363:-_chr1:103001925|103001969:-_chr1:103002428|103002481:-_chr1:103002747|103002791:-_chr1:103003215|103003268:-_chr1:103004444|103004488:-_chr1:103004608|103004661:-_chr1:103005838|103005891:-_chr1:103006068|103006121:-_chr1:103006262|103006315:-_chr1:103008463|103008516:-_chr1:103012413|103012469:-_chr1:103014511|103014594:-_chr1:103015668|103015742:-_chr1:103017820|103017882:-_chr1:103018818|103018859:-_chr1:103021707|103021769:-_chr1:103022742|103022996:-_chr1:103025521|103025613:-_chr1:103025800|103025952:-_chr1:103026216|103026332:-_chr1:103031116|103031244:-_chr1:103074618|103074780:-_chr1:103078658|103078871:-_chr1:103082805|103082972:-_chr1:103108073|103108491:-","COL11A1_LS072","COL11A1","protein coding gene","no",4.86,0,0,0.011,107,0,0,"0(0)","LGG;UCS","yes","NA","NA","exon_intersect_chr1:103026216|103026332","intron_intersect_chr1:103025952|103026216"]
["chr1:103104069|103108091:+","chr1:102933587|102933856:+_chr1:102962163|102962350:+_chr1:102997816|102997973:+_chr1:103004113|103004196:+_chr1:103103962|103104069:+_chr1:103108091|103108253:+_chr1:103108360|103108973:+","UN_COL11A1_LS0038","COL11A1","protein coding gene","no",2.62,0,0,0.006,54,0,0,"0(0)","ESCA;THYM","no","TE_intersect_:103104031|chr1|103104031|103104114|MIR3:MIR:SINE|291|+","NA","intron_intersect_chr1:103100704|103108073","exon_intersect_chr1:103108073|103108496"]
["chr1:10337203|10339769:+","chr1:10296895|10297077:+_chr1:10297174|10297246:+_chr1:10320043|10320136:+_chr1:10321709|10321857:+_chr1:10323884|10324062:+_chr1:10324758|10324895:+_chr1:10334520|10334638:+_chr1:10336657|10336742:+_chr1:10337074|10337203:+_chr1:10339769|10339859:+_chr1:10342050|10342168:+_chr1:10343232|10343287:+_chr1:10345845|10345953:+_chr1:10347761|10347827:+_chr1:10348649|10348733:+_chr1:10352631|10352736:+_chr1:10360929|10361043:+_chr1:10361692|10361825:+_chr1:10363283|10363344:+_chr1:10365100|10365245:+_chr1:10365409|10365648:+_chr1:10368467|10368538:+_chr1:10371141|10371262:+_chr1:10374316|10374465:+_chr1:10374854|10375046:+_chr1:10375255|10375373:+_chr1:10376545|10381603:+","UN_KIF1B_LS0026","KIF1B","protein coding gene","yes",0.7,0,0,0.005,51,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:10337203|10337371","exon_intersect_chr1:10339769|10339859"]
["chr1:103693530|103713743:-","chr1:103687427|103687638:-_chr1:103688958|103689083:-_chr1:103689194|103689312:-_chr1:103691294|103691393:-_chr1:103691488|103691610:-_chr1:103692427|103692560:-_chr1:103693300|103693530:-_chr1:103713743|103713953:-","UN_AC105272.1_UP_LS0007","AC105272.1","pseudogene","no",61.24,0,0,0.001,14,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:103713723|103713953","intron_intersect_chr1:103693530|103693979"]
["chr1:10380487|10384057:-","chr1:10380126|10380487:-_chr1:10384057|10384116:-","UN_AL590639.1_UP_LS0007","AL590639.1","pseudogene","no",2.4,0,0,0.005,51,0,0,"0(0)","GBM","no","TE_intersect_:10384024|chr1|10384024|10384278|AluSq:Alu:SINE|63|+","TE_intersect_:10380425|chr1|10380425|10380719|AluSx:Alu:SINE|99|+","NA","exon_intersect_chr1:10376545|10381603"]
["chr1:10399704|10403071:+","chr1:10399632|10399704:+_chr1:10403071|10403136:+_chr1:10404161|10404279:+_chr1:10408071|10408140:+_chr1:10411418|10411552:+_chr1:10413062|10413251:+_chr1:10416987|10417044:+","UN_PGD_LS0002","PGD","protein coding gene","no",4.09,0,0,0.004,40,0,0,"0(0)","UCEC","no","NA","NA","exon_intersect_chr1:10399498|10400008","exon_intersect_chr1:10403071|10403136"]
["chr1:1041613|1043938:-","chr1:1041484|1041613:-_chr1:1043938|1044020:-","UN_AGRN_LS0030","AGRN","protein coding gene","yes",2.72,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1043823|1044023","exon_intersect_chr1:1041478|1041702"]
["chr1:10419819|10419922:-","chr1:10419422|10419545:-_chr1:10419667|10419819:-_chr1:10419922|10420508:-","UN_PGD_LS0042","PGD","protein coding gene","no",16.7,0,0,0.004,43,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:10419417|10420144","exon_intersect_chr1:10419417|10420144"]
["chr1:10425850|10433842:+","chr1:10425489|10425850:+_chr1:10433842|10433965:+_chr1:10434657|10434690:+_chr1:10440347|10440413:+_chr1:10442265|10442657:+","UN_CORT_UP_LS0001","CORT","protein coding gene","no",5.06,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:10425655|chr1|10425655|10426924|LTR12C:ERV1:LTR|63|-","NA","NA","exon_intersect_chr1:10433842|10433965"]
["chr1:10425850|10440347:+","chr1:10425508|10425850:+_chr1:10440347|10440413:+_chr1:10442265|10442657:+","UN_CORT_UP_LS0002","CORT","protein coding gene","no",2.33,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:10425655|chr1|10425655|10426924|LTR12C:ERV1:LTR|63|-","NA","NA","exon_intersect_chr1:10440123|10440413"]
["chr1:10430568|10451377:+","chr1:10430512|10430568:+_chr1:10451377|10451659:+","UN_CENPS-CORT_LS0002","CENPS-CORT","protein coding gene","no",4.08,0,0,0.044,425,0,0,"0(0)","BLCA;CESC;ESCA;GBM;OV;SARC;THYM;UCEC;UCS","no","NA","NA","exon_intersect_chr1:10429881|10430677","exon_intersect_chr1:10451377|10452153"]
["chr1:104359442|104363852:-","chr1:104357617|104359442:-_chr1:104363852|104363928:-_chr1:104379806|104379876:-_chr1:104407426|104407975:-","UN_FTLP17_UP_LS0007","FTLP17","pseudogene","no",4.52,0,0,0.017,163,0,0,"0(0)","BRCA;LIHC;SKCM;UVM","no","TE_intersect_:104362891|chr1|104362891|104365382|L1MA10:L1:LINE|241|+","NA","NA","NA"]
["chr1:104359442|104407426:-","chr1:104357245|104359442:-_chr1:104407426|104408020:-","UN_FTLP17_UP_LS0009","FTLP17","pseudogene","no",5.2,0,0,0.004,35,0,0,"0(0)","UVM","no","TE_intersect_:104407086|chr1|104407086|104407427|L1MC3:L1:LINE|248|-","NA","NA","NA"]
["chr1:104363928|104379806:-","chr1:104357617|104359442:-_chr1:104363852|104363928:-_chr1:104379806|104379876:-_chr1:104407426|104407975:-","UN_FTLP17_UP_LS0010","FTLP17","pseudogene","no",3.71,0,0,0.011,105,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:104379024|chr1|104379024|104380122|L1MA3:L1:LINE|182|+","TE_intersect_:104362891|chr1|104362891|104365382|L1MA10:L1:LINE|241|+","NA","NA"]
["chr1:104363928|104407426:-","chr1:104357594|104359442:-_chr1:104363852|104363928:-_chr1:104407426|104408002:-","UN_FTLP17_UP_LS0011","FTLP17","pseudogene","no",9.1,0,0,0.01,94,0,0,"0(0)","BRCA;LIHC;SKCM;UVM","no","TE_intersect_:104407086|chr1|104407086|104407427|L1MC3:L1:LINE|248|-","TE_intersect_:104362891|chr1|104362891|104365382|L1MA10:L1:LINE|241|+","NA","NA"]
["chr1:104379876|104407426:-","chr1:104357617|104359442:-_chr1:104363852|104363928:-_chr1:104379806|104379876:-_chr1:104407426|104407975:-","UN_FTLP17_UP_LS0013","FTLP17","pseudogene","no",5.17,0,0,0.009,89,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:104407086|chr1|104407086|104407427|L1MC3:L1:LINE|248|-","TE_intersect_:104379024|chr1|104379024|104380122|L1MA3:L1:LINE|182|+","NA","NA"]
["chr1:10458767|10461143:-","chr1:10456522|10458767:-_chr1:10461143|10461702:-_chr1:10463058|10463209:-_chr1:10463431|10463620:-_chr1:10467190|10467332:-_chr1:10469177|10469338:-_chr1:10472323|10472479:-","UN_DFFA_LS0026","DFFA","protein coding gene","yes",3.1,0,0,0.006,60,0,0,"0(0)","OV","no","TE_intersect_:10460907|chr1|10460907|10461207|AluY:Alu:SINE|63|-","TE_intersect_:10458534|chr1|10458534|10458836|AluSx1:Alu:SINE|122|-","exon_intersect_chr1:10456522|10461702","exon_intersect_chr1:10456522|10461702"]
["chr1:1048327|1049711:-","chr1:1048119|1048327:-_chr1:1049711|1049796:-","UN_AGRN_LS0112","AGRN","protein coding gene","yes",1.39,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1049566|1049795","exon_intersect_chr1:1048012|1048365"]
["chr1:1048952|1049639:-","chr1:1048866|1048952:-_chr1:1049639|1049796:-","UN_AGRN_LS0121","AGRN","protein coding gene","yes",0.94,0,0,0.003,29,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:1049566|1049795","exon_intersect_chr1:1048529|1049059"]
["chr1:1049395|1049597:-","chr1:1049231|1049395:-_chr1:1049597|1049796:-","UN_AGRN_LS0131","AGRN","protein coding gene","yes",3.99,0,0,0.005,46,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr1:1049566|1049795","exon_intersect_chr1:1049236|1049451"]
["chr1:1049401|1049750:-","chr1:1049231|1049401:-_chr1:1049750|1049796:-","UN_AGRN_LS0136","AGRN","protein coding gene","yes",2.3,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1049566|1049795","exon_intersect_chr1:1049236|1049451"]
["chr1:1049413|1049581:-","chr1:1048794|1049021:-_chr1:1049402|1049413:-_chr1:1049581|1049796:-","UN_AGRN_LS0140","AGRN","protein coding gene","yes",3.24,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1049566|1049795","exon_intersect_chr1:1049236|1049451"]
["chr1:105287335|105304720:-","chr1:105282643|105287335:-_chr1:105304720|105304841:-_chr1:105309721|105309767:-_chr1:105311626|105311661:-_chr1:105324863|105325153:-_chr1:105360742|105360849:-_chr1:105372586|105373285:-","UN_AL591888.1_UP_LS0007","AL591888.1","lncRNA gene","no",6.17,0,0,0.003,28,0,0,"0(0)","PRAD","no","NA","TE_intersect_:105287060|chr1|105287060|105287415|MLT1A0:ERVL-MaLR:LTR|212|+","NA","NA"]
["chr1:105304841|105309721:-","chr1:105303142|105304841:-_chr1:105309721|105309767:-_chr1:105311626|105311661:-_chr1:105324863|105325153:-_chr1:105372586|105373176:-","UN_AL591888.1_UP_LS0009","AL591888.1","lncRNA gene","no",11.26,0,0,0.003,28,0,0,"0(0)","PRAD","no","NA","NA","NA","NA"]
["chr1:105309767|105311626:-","chr1:105303142|105304841:-_chr1:105309721|105309767:-_chr1:105311626|105311661:-_chr1:105324863|105325153:-_chr1:105372586|105373176:-","UN_AL591888.1_UP_LS0010","AL591888.1","lncRNA gene","no",8.39,0,0,0.003,31,0,0,"0(0)","PRAD","no","NA","NA","NA","NA"]
["chr1:10536297|10541052:+","chr1:10474982|10475002:+_chr1:10495274|10495321:+_chr1:10536213|10536297:+_chr1:10541052|10542558:+","UN_PEX14_LS0029","PEX14","protein coding gene","no",1.62,0,0,0.005,45,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:10536213|10536572","intron_intersect_chr1:10536572|10599238"]
["chr1:105397548|105398342:-","chr1:105397321|105397548:-_chr1:105398342|105398607:-_chr1:105399655|105399757:-","UN_AL591888.1_UP_LS0024","AL591888.1","lncRNA gene","no",3.73,0,0,0.004,37,0,0,"0(0)","PRAD","no","TE_intersect_:105398226|chr1|105398226|105398370|HUERS-P2-int:ERV1:LTR|200|-","TE_intersect_:105397507|chr1|105397507|105398229|HUERS-P2-int:ERV1:LTR|239|-","NA","NA"]
["chr1:105398607|105399655:-","chr1:105397321|105397548:-_chr1:105398342|105398607:-_chr1:105399655|105399757:-","UN_AL591888.1_UP_LS0025","AL591888.1","lncRNA gene","no",3.1,0,0,0.003,29,0,0,"0(0)","PRAD","no","TE_intersect_:105399484|chr1|105399484|105399853|L1MEd:L1:LINE|358|-","TE_intersect_:105398371|chr1|105398371|105398967|LTR1C1:ERV1:LTR|168|-","NA","NA"]
["chr1:1055055|1055231:-","chr1:1054890|1055055:-_chr1:1055231|1055336:-_chr1:1126849|1126858:-","UN_AGRN_LS0222","AGRN","protein coding gene","yes",2.25,0,0,0.004,39,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1054824|1056118","exon_intersect_chr1:1054824|1056118"]
["chr1:1055242|1055448:-","chr1:1055041|1055242:-_chr1:1055448|1055657:-_chr1:1055804|1055970:-","UN_AGRN_LS0262","AGRN","protein coding gene","yes",6.52,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1054824|1056118","exon_intersect_chr1:1054824|1056118"]
["chr1:1058526|1058955:+","chr1:1058427|1058526:+_chr1:1058955|1059128:+_chr1:1060280|1060393:+_chr1:1061020|1061117:+_chr1:1063079|1063201:+_chr1:1065830|1066274:+","UN_AL390719.1_UP_LS0002","AL390719.1","pseudogene","no",1.52,0,0,0.004,40,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:1058526|1060280:+","chr1:1058446|1058526:+_chr1:1060280|1060393:+_chr1:1063079|1063201:+_chr1:1065830|1066274:+","UN_AL390719.3_UP_LS0004","AL390719.3","lncRNA gene","no",1.9,0,0,0.011,103,0,0,"0(0)","LUAD","no","NA","TE_intersect_:1060086|chr1|1060086|1060375|AluSg:Alu:SINE|125|-","NA","exon_intersect_chr1:1060280|1060393"]
["chr1:1059128|1060277:+","chr1:1059024|1059128:+_chr1:1060277|1060393:+_chr1:1063079|1063201:+_chr1:1065830|1066441:+","UN_AL390719.3_UP_LS0005","AL390719.3","lncRNA gene","no",1.61,0,0,0.009,89,0.001,1,"0(0)","THYM","no","NA","TE_intersect_:1060086|chr1|1060086|1060375|AluSg:Alu:SINE|125|-","NA","intron_intersect_chr1:1059846|1060280"]
["chr1:1059128|1060280:+","chr1:1058427|1058526:+_chr1:1058955|1059128:+_chr1:1060280|1060393:+_chr1:1061020|1061117:+_chr1:1063079|1063201:+_chr1:1065830|1066274:+","UN_AL390719.3_UP_LS0006","AL390719.3","lncRNA gene","no",2.37,0,0,0.009,85,0,0,"0(0)","THYM","no","NA","TE_intersect_:1060086|chr1|1060086|1060375|AluSg:Alu:SINE|125|-","NA","exon_intersect_chr1:1060280|1060393"]
["chr1:1061957|1063079:+","chr1:1061020|1061117:+_chr1:1061849|1061957:+_chr1:1063079|1063201:+_chr1:1065830|1066274:+","UN_AL390719.1_LS0013","AL390719.1","pseudogene","no",2.24,0,0,0.008,73,0.001,1,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:1061117|1062208","exon_intersect_chr1:1063061|1063288"]
["chr1:1061974|1062215:-","chr1:1061119|1061974:-_chr1:1062215|1063288:-","UN_AL390719.1_LS0015","AL390719.1","pseudogene","no",2.12,0,0,0.012,117,0,0,"0(0)","CHOL;KIRP;LUAD","no","NA","NA","exon_intersect_chr1:1062208|1062808","intron_intersect_chr1:1061117|1062208"]
["chr1:1063317|1064206:+","chr1:1059029|1059128:+_chr1:1060277|1060393:+_chr1:1061020|1061117:+_chr1:1063079|1063317:+_chr1:1064206|1064401:+_chr1:1065830|1066274:+","UN_AL390719.1_LS0024","AL390719.1","pseudogene","no",1.04,0,0,0.003,27,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:1063288|1063480","intron_intersect_chr1:1063566|1064210"]
["chr1:1063317|1065830:+","chr1:1059734|1059782:+_chr1:1060277|1060393:+_chr1:1063079|1063317:+_chr1:1065830|1067302:+","UN_AL390719.1_LS0025","AL390719.1","pseudogene","no",1.66,0,0,0.008,80,0,0,"0(0)","OV","no","NA","TE_intersect_:1065544|chr1|1065544|1066494|LTR13A:ERVK:LTR|46|-","intron_intersect_chr1:1063288|1063480","exon_intersect_chr1:1065830|1066456"]
["chr1:1064374|1065830:+","chr1:1063079|1063201:+_chr1:1064206|1064374:+_chr1:1065830|1066441:+","UN_AL390719.1_LS0027","AL390719.1","pseudogene","no",3.34,0,0,0.004,37,0,0,"0(0)","THYM","no","NA","TE_intersect_:1065544|chr1|1065544|1066494|LTR13A:ERVK:LTR|46|-","exon_intersect_chr1:1064210|1064401","exon_intersect_chr1:1065830|1066456"]
["chr1:10665571|10705492:-","chr1:10649283|10649437:-_chr1:10650692|10650755:-_chr1:10650941|10651076:-_chr1:10653377|10654218:-_chr1:10654419|10654591:-_chr1:10655649|10655813:-_chr1:10656646|10656736:-_chr1:10658508|10658576:-_chr1:10659702|10660536:-_chr1:10665083|10665571:-_chr1:10705492|10705544:-_chr1:10760701|10760857:-_chr1:10796564|10796660:-","UN_CASZ1_LS0048","CASZ1","protein coding gene","no",1.5,0,0,0.004,41,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:10705492|10705575","intron_intersect_chr1:10665571|10693874"]
["chr1:1068963|1069307:-","chr1:1065519|1065833:-_chr1:1068561|1068963:-_chr1:1069307|1069322:-","UN_AL390719.1_LS0058","AL390719.1","pseudogene","no",1.2,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1069208|1069355","intron_intersect_chr1:1068724|1069208"]
["chr1:10728851|10731684:+","chr1:10728770|10728851:+_chr1:10731684|10731889:+","UN_CASZ1_LS0062","CASZ1","protein coding gene","no",1.93,0,0,0.002,15,0,0,"0(0)","GBM","no","NA","TE_intersect_:10731613|chr1|10731613|10732042|Charlie1a:hAT-Charlie:DNA|228|+","intron_intersect_chr1:10705575|10760701","intron_intersect_chr1:10705575|10760701"]
["chr1:107418645|107436665:+","chr1:107140015|107141140:+_chr1:107148069|107148839:+_chr1:107324282|107324922:+_chr1:107395154|107395326:+_chr1:107407682|107407708:+_chr1:107418580|107418645:+_chr1:107436665|107436799:+_chr1:107480611|107481828:+","UN_NTNG1_LS0019","NTNG1","protein coding gene","no",2.12,0,0,0.005,44,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:107418645|107421084","exon_intersect_chr1:107436665|107436799"]
["chr1:107601014|107609388:+","chr1:107600917|107601014:+_chr1:107609388|107609649:+","UN_VAV3_LS0010","VAV3","protein coding gene","yes",4.39,0,0,0.003,25,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:107596341|107602397","intron_intersect_chr1:107603163|107609424"]
["chr1:107607303|107609388:+","chr1:107606154|107607303:+_chr1:107609388|107609626:+","UN_VAV3_LS0013","VAV3","protein coding gene","yes",2.46,0,0,0.002,15,0,0,"0(0)","THYM","no","TE_intersect_:107607287|chr1|107607287|107607645|HAL1:L1:LINE|333|-","NA","intron_intersect_chr1:107603163|107609424","intron_intersect_chr1:107603163|107609424"]
["chr1:107964504|108040266:+","chr1:107964390|107964504:+_chr1:108040266|108040379:+_chr1:108041738|108041924:+_chr1:108042361|108042756:+","UN_AL359258.2_UP_LS0001","AL359258.2","lncRNA gene","no",1.73,0,0,0.003,30,0,0,"0(0)","DLBC","no","NA","TE_intersect_:108040166|chr1|108040166|108040478|L2c:L2:LINE|343|+","intron_intersect_chr1:107964504|107964666","NA"]
["chr1:108040379|108041710:+","chr1:108039469|108040379:+_chr1:108041710|108041924:+","UN_AL390036.1_LS0002","AL390036.1","lncRNA gene","no",3.39,0,0,0.004,39,0,0,"0(0)","DLBC","no","TE_intersect_:108040166|chr1|108040166|108040478|L2c:L2:LINE|343|+","NA","NA","NA"]
["chr1:108247681|108261531:-","chr1:108222401|108223746:-_chr1:108226679|108226893:-_chr1:108228920|108229156:-_chr1:108232256|108232428:-_chr1:108233160|108233211:-_chr1:108234242|108234411:-_chr1:108235236|108235287:-_chr1:108236270|108236409:-_chr1:108237287|108237338:-_chr1:108238748|108238959:-_chr1:108239828|108239906:-_chr1:108240950|108241164:-_chr1:108242074|108242173:-_chr1:108243584|108243796:-_chr1:108246602|108247681:-_chr1:108261531|108262790:-_chr1:108272804|108273689:-","UN_NBPF4_UP_LS0006","NBPF4","protein coding gene","no",2.88,0,0,0.01,98,0,0,"0(0)","BRCA","no","NA","NA","exon_intersect_chr1:108261196|108262790","NA"]
["chr1:108269167|108284240:+","chr1:108268577|108269167:+_chr1:108284240|108284351:+_chr1:108331171|108331278:+_chr1:108333657|108333824:+_chr1:108335977|108336127:+_chr1:108337203|108338080:+","UN_NBPF5P_UP_LS0001","NBPF5P","pseudogene","no",2.68,0,0,0.006,55,0,0,"0(0)","BRCA","no","TE_intersect_:108268736|chr1|108268736|108269553|L2b:L2:LINE|333|-","NA","intron_intersect_chr1:108262790|108272804","exon_intersect_chr1:108284240|108284351"]
["chr1:108312021|108316692:-","chr1:108311091|108312021:-_chr1:108316692|108316746:-_chr1:108410028|108410139:-_chr1:108424960|108425808:-","UN_SLC25A24P1_LS0006","SLC25A24P1","pseudogene","no",3.4,0,0,0.008,73,0,0,"0(0)","BRCA","no","NA","NA","intron_intersect_chr1:108314234|108331171","intron_intersect_chr1:108310643|108314082"]
["chr1:108316746|108410028:-","chr1:108311091|108312021:-_chr1:108316692|108316746:-_chr1:108410028|108410139:-_chr1:108424960|108425808:-","UN_AL359258.1_UP_LS0002","AL359258.1","lncRNA gene","no",5.45,0,0,0.007,69,0,0,"0(0)","BRCA","no","NA","NA","exon_intersect_chr1:108410028|108410139","intron_intersect_chr1:108314234|108331171"]
["chr1:108410139|108416624:-","chr1:108369593|108370411:-_chr1:108410028|108410139:-_chr1:108416624|108417646:-","UN_SLC25A24P2_LS0001","SLC25A24P2","pseudogene","no",3.83,0,0,0.005,49,0,0,"0(0)","BRCA","no","TE_intersect_:108416486|chr1|108416486|108416730|AluSz:Alu:SINE|115|+","NA","intron_intersect_chr1:108410814|108420689","intron_intersect_chr1:108410139|108410504"]
["chr1:108410139|108425211:-","chr1:108369596|108370411:-_chr1:108410028|108410139:-_chr1:108425211|108425365:-","UN_AL359258.1_UP_LS0008","AL359258.1","lncRNA gene","no",2.72,0,0,0.003,30,0,0,"0(0)","BRCA","no","TE_intersect_:108424824|chr1|108424824|108425641|L2b:L2:LINE|333|+","NA","intron_intersect_chr1:108421574|108431590","intron_intersect_chr1:108410139|108410504"]
["chr1:108432849|108446692:+","chr1:108420689|108421574:+_chr1:108431590|108432849:+_chr1:108446692|108447771:+_chr1:108450567|108450779:+_chr1:108452190|108452289:+_chr1:108453181|108453395:+_chr1:108454439|108454517:+_chr1:108455386|108455597:+_chr1:108457007|108457058:+_chr1:108457936|108458075:+_chr1:108459058|108459109:+_chr1:108459933|108460102:+_chr1:108461133|108461184:+_chr1:108461916|108462088:+_chr1:108465188|108465395:+","UN_NBPF6_UP_LS0004","NBPF6","protein coding gene","no",3.11,0,0,0.005,44,0,0,"0(0)","BRCA","no","NA","NA","exon_intersect_chr1:108431590|108433184","intron_intersect_chr1:108433184|108450282"]
["chr1:108531401|108536074:-","chr1:108530664|108531401:-_chr1:108536074|108536941:-","UN_AL392088.2_UP_LS0004","AL392088.2","pseudogene","no",3.03,0,0,0.008,76,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:108535475|chr1|108535475|108536858|SVA_D:SVA:Retroposon|60|-","TE_intersect_:108531271|chr1|108531271|108531466|L4_B_Mam:RTE-X:LINE|301|-","NA","NA"]
["chr1:108531401|108536209:-","chr1:108531263|108531401:-_chr1:108536209|108536951:-","UN_AL392088.2_UP_LS0007","AL392088.2","pseudogene","no",3.44,0,0,0.032,311,0,0,"0(0)","CESC;CHOL;COAD;ESCA;PRAD;READ;STAD;UCEC","no","TE_intersect_:108535475|chr1|108535475|108536858|SVA_D:SVA:Retroposon|60|-","TE_intersect_:108531271|chr1|108531271|108531466|L4_B_Mam:RTE-X:LINE|301|-","NA","NA"]
["chr1:108699466|108699571:+","chr1:108692341|108692867:+_chr1:108693590|108693642:+_chr1:108695702|108695780:+_chr1:108696043|108696194:+_chr1:108696277|108696351:+_chr1:108697810|108697863:+_chr1:108697947|108698017:+_chr1:108698604|108698827:+_chr1:108699162|108699466:+_chr1:108699571|108701803:+","UN_PRPF38B_LS0019","PRPF38B","protein coding gene","no",7.27,0,0,0.005,45,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:108699162|108701803","exon_intersect_chr1:108699162|108701803"]
["chr1:108817252|108823650:+","chr1:108817050|108817252:+_chr1:108823650|108823718:+_chr1:108834190|108834336:+_chr1:108836249|108836468:+_chr1:108836961|108837208:+_chr1:108858158|108858599:+","UN_AKNAD1_LS0002","AKNAD1","protein coding gene","no",1.34,0,0,0.004,42,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:108816874|108817454","exon_intersect_chr1:108823566|108823688"]
["chr1:108823718|108834190:+","chr1:108823683|108823718:+_chr1:108834190|108834336:+_chr1:108836249|108836468:+_chr1:108836961|108837208:+_chr1:108858158|108858722:+","UN_AKNAD1_LS0007","AKNAD1","protein coding gene","no",2.07,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","TE_intersect_:108834070|chr1|108834070|108834229|MER5A1:hAT-Charlie:DNA|176|+","intron_intersect_chr1:108823688|108827205","intron_intersect_chr1:108830734|108834447"]
["chr1:108824266|108834190:+","chr1:108824252|108824266:+_chr1:108834190|108834336:+_chr1:108836249|108836468:+_chr1:108836961|108837208:+_chr1:108858158|108858340:+","UN_AKNAD1_LS0008","AKNAD1","protein coding gene","no",1.9,0,0,0.003,29,0,0,"0(0)","GBM;KICH","no","NA","TE_intersect_:108834070|chr1|108834070|108834229|MER5A1:hAT-Charlie:DNA|176|+","intron_intersect_chr1:108823688|108827205","intron_intersect_chr1:108830734|108834447"]
["chr1:108834336|108836249:+","chr1:108834198|108834336:+_chr1:108836249|108836468:+_chr1:108836961|108837208:+_chr1:108858158|108858340:+","UN_AKNAD1_LS0011","AKNAD1","protein coding gene","no",3.22,0,0,0.012,118,0,0,"0(0)","GBM;KICH;LGG","no","NA","NA","intron_intersect_chr1:108830734|108834447","intron_intersect_chr1:108835056|108836724"]
["chr1:108849576|108858058:-","chr1:108815901|108816302:-_chr1:108817048|108817177:-_chr1:108823370|108823477:-_chr1:108823566|108823688:-_chr1:108827205|108827302:-_chr1:108830559|108830650:-_chr1:108834447|108834528:-_chr1:108834929|108835056:-_chr1:108837550|108837706:-_chr1:108843134|108843267:-_chr1:108848752|108848814:-_chr1:108848912|108849060:-_chr1:108849537|108849576:-_chr1:108858058|108858228:-","UN_AL449266.1_LS0001","AL449266.1","protein coding gene","no",2.69,0,0,0.005,49,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:108858058|108858228","intron_intersect_chr1:108849576|108851672"]
["chr1:108932148|109038554:-","chr1:108929980|108932148:-_chr1:109038554|109038573:-","UN_AKNAD1_UP_LS0003","AKNAD1","protein coding gene","no",3.05,0,0,0.005,52,0,0,"0(0)","KICH","no","TE_intersect_:109038397|chr1|109038397|109038692|AluJo:Alu:SINE|142|+","TE_intersect_:108931990|chr1|108931990|108932283|AluSz:Alu:SINE|113|+","intron_intersect_chr1:109030319|109041520","exon_intersect_chr1:108929508|108932501"]
["chr1:109027666|109063720:+","chr1:109027627|109027666:+_chr1:109063720|109063916:+","UN_TMEM167B_UP_LS0003","TMEM167B","protein coding gene","no",2.08,0,0,0.014,133,0,0,"0(0)","ESCA;OV","no","TE_intersect_:109027528|chr1|109027528|109027820|AluSg4:Alu:SINE|106|-","TE_intersect_:109063452|chr1|109063452|109063741|AluSz6:Alu:SINE|100|-","intron_intersect_chr1:109024992|109030067","intron_intersect_chr1:109063072|109064140"]
["chr1:109076092|109078471:-","chr1:109062486|109064693:-_chr1:109066135|109066232:-_chr1:109074987|109075065:-_chr1:109075921|109076092:-_chr1:109078471|109078650:-_chr1:109083215|109083327:-","UN_TAF13_UP_LS0001","TAF13","protein coding gene","no",0.75,0,0,0.003,26,0,0,"0(0)","STAD","no","TE_intersect_:109078303|chr1|109078303|109078781|MLT1F2:ERVL-MaLR:LTR|204|-","NA","NA","NA"]
["chr1:10913209|10913753:-","chr1:10912850|10913209:-_chr1:10913753|10913885:-_chr1:10916996|10918076:-","UN_CASZ1_UP_LS0009","CASZ1","protein coding gene","no",4.75,0,0,0.02,192,0,0,"0(0)","ESCA;LUSC;THYM","no","TE_intersect_:10913529|chr1|10913529|10914108|MLT1G1:ERVL-MaLR:LTR|236|-","TE_intersect_:10913099|chr1|10913099|10913529|L2c:L2:LINE|304|-","NA","NA"]
["chr1:10918672|10920209:-","chr1:10912803|10913209:-_chr1:10913829|10913885:-_chr1:10916996|10917250:-_chr1:10918513|10918672:-_chr1:10920209|10920393:-","UN_CASZ1_UP_LS0020","CASZ1","protein coding gene","no",1.78,0,0,0.011,103,0,0,"0(0)","ESCA;LUSC","no","NA","TE_intersect_:10918536|chr1|10918536|10918706|MER5A1:hAT-Charlie:DNA|173|-","NA","NA"]
["chr1:10918672|10942051:-","chr1:10912912|10913209:-_chr1:10913829|10913885:-_chr1:10916996|10917250:-_chr1:10918513|10918672:-_chr1:10942051|10942322:-","UN_CASZ1_UP_LS0024","CASZ1","protein coding gene","no",2.05,0,0,0.003,32,0,0,"0(0)","OV","no","NA","TE_intersect_:10918536|chr1|10918536|10918706|MER5A1:hAT-Charlie:DNA|173|-","NA","NA"]
["chr1:109206134|109206270:-","chr1:109205968|109206134:-_chr1:109206270|109206422:-","UN_KIAA1324_LS0060","KIAA1324","protein coding gene","no",1.24,0,0,0.002,19,0,0,"0(0)","ESCA","no","TE_intersect_:109206011|chr1|109206011|109206314|AluSz:Alu:SINE|119|-","TE_intersect_:109206011|chr1|109206011|109206314|AluSz:Alu:SINE|119|-","exon_intersect_chr1:109202913|109206781","exon_intersect_chr1:109202913|109206781"]
["chr1:109214128|109221087:+","chr1:109213982|109214128:+_chr1:109221087|109221203:+_chr1:109223978|109224048:+_chr1:109228352|109228432:+_chr1:109229414|109229572:+_chr1:109230878|109231021:+_chr1:109231631|109231786:+_chr1:109235210|109235431:+","SARS_LS004","SARS","protein coding gene","no",4.36,0,0,0.009,87,0,0,"0(0)","ESCA;GBM;OV","yes","NA","TE_intersect_:109221051|chr1|109221051|109221358|AluSc:Alu:SINE|91|-","intron_intersect_chr1:109214128|109214547","intron_intersect_chr1:109215153|109223978"]
["chr1:109221203|109223978:+","chr1:109213982|109214128:+_chr1:109221087|109221203:+_chr1:109223978|109224048:+_chr1:109228352|109228432:+_chr1:109229414|109229572:+_chr1:109230878|109231021:+_chr1:109231631|109231786:+_chr1:109235210|109235431:+","UN_SARS_LS0014","SARS","protein coding gene","no",4.08,0,0,0.008,74,0,0,"0(0)","ESCA;GBM;OV","no","TE_intersect_:109221051|chr1|109221051|109221358|AluSc:Alu:SINE|91|-","NA","intron_intersect_chr1:109215153|109223978","exon_intersect_chr1:109223978|109224048"]
["chr1:109275154|109275340:-","chr1:109274941|109275154:-_chr1:109275340|109275402:-","UN_CELSR2_LS0112","CELSR2","protein coding gene","no",1.43,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109273166|109275750","exon_intersect_chr1:109273166|109275750"]
["chr1:109282789|109283063:-","chr1:109281155|109281251:-_chr1:109281619|109282060:-_chr1:109282518|109282575:-_chr1:109282680|109282789:-_chr1:109283063|109283115:-","PSRC1_LS022","PSRC1","protein coding gene","no",2.31,0,0,0.015,148,0,0,"0(0)","ESCA;STAD;TGCT","yes","NA","NA","exon_intersect_chr1:109282518|109283186","exon_intersect_chr1:109282518|109283186"]
["chr1:109310889|109310980:+","chr1:109310701|109310889:+_chr1:109310980|109311195:+","UN_SORT1_LS0020","SORT1","protein coding gene","no",3.28,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109309568|109314057","exon_intersect_chr1:109309568|109314057"]
["chr1:109311941|109312228:+","chr1:109269727|109269820:+_chr1:109269933|109270133:+_chr1:109270426|109270600:+_chr1:109270927|109271039:+_chr1:109271217|109271296:+_chr1:109271386|109271512:+_chr1:109271600|109271722:+_chr1:109272278|109272405:+_chr1:109272640|109272728:+_chr1:109272833|109273027:+_chr1:109273166|109273336:+_chr1:109273436|109273670:+_chr1:109311689|109311941:+_chr1:109312228|109312418:+","UN_SORT1_LS0035","SORT1","protein coding gene","no",0.69,0,0,0.001,13,0,0,"0(0)","ESCA","no","TE_intersect_:109311914|chr1|109311914|109312014|MIRc:MIR:SINE|323|+","NA","exon_intersect_chr1:109309568|109314057","exon_intersect_chr1:109309568|109314057"]
["chr1:109337722|109499459:+","chr1:109337623|109337722:+_chr1:109499459|109500433:+","UN_GPR61_UP_LS0001","GPR61","protein coding gene","no",1.36,0,0,0.004,36,0,0,"0(0)","OV","no","TE_intersect_:109337637|chr1|109337637|109337923|AluSz:Alu:SINE|126|-","TE_intersect_:109499359|chr1|109499359|109499652|AluSc:Alu:SINE|82|-","intron_intersect_chr1:109336346|109340724","exon_intersect_chr1:109495679|109500440"]
["chr1:109421926|109426420:-","chr1:109401850|109402090:-_chr1:109409928|109410014:-_chr1:109411011|109411113:-_chr1:109411877|109411935:-_chr1:109412077|109412184:-_chr1:109413068|109413135:-_chr1:109415237|109415363:-_chr1:109421860|109421926:-_chr1:109426420|109426469:-","UN_PSMA5_LS0032","PSMA5","protein coding gene","no",2.47,0,0,0.01,92,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109426302|109426427","intron_intersect_chr1:109421926|109425326"]
["chr1:109491862|109492027:+","chr1:109489340|109490128:+_chr1:109490271|109490392:+_chr1:109490922|109491717:+_chr1:109491807|109491862:+_chr1:109492027|109492104:+_chr1:109492586|109492727:+","UN_ATXN7L2_LS0017","ATXN7L2","protein coding gene","no",2.74,0,0,0.008,73,0,0,"0(0)","ACC;UCS","no","NA","NA","exon_intersect_chr1:109490922|109492104","exon_intersect_chr1:109490922|109492104"]
["chr1:10957107|10957585:-","chr1:10946469|10946738:-_chr1:10947643|10948844:-_chr1:10949702|10949814:-_chr1:10954019|10954142:-_chr1:10954990|10955186:-_chr1:10957023|10957107:-_chr1:10957585|10957753:-_chr1:10958714|10958871:-","UN_C1orf127_LS0006","C1orf127","protein coding gene","no",1.45,0,0,0.002,19,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:10957585|10957753","intron_intersect_chr1:10957107|10957585"]
["chr1:109621266|109623979:+","chr1:109621115|109621266:+_chr1:109623979|109624089:+_chr1:109625303|109625433:+_chr1:109625662|109625792:+_chr1:109626160|109626228:+_chr1:109626319|109626417:+","UN_AMPD2_LS0006","AMPD2","protein coding gene","no",2.24,0.12,0,0.004,38,0.003,2,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:109621266|109621269","exon_intersect_chr1:109623814|109624089"]
["chr1:109666233|109667063:+","chr1:109656721|109656787:+_chr1:109657215|109657279:+_chr1:109657590|109657671:+_chr1:109657772|109657872:+_chr1:109658814|109658909:+_chr1:109659000|109659110:+_chr1:109665011|109665083:+_chr1:109666136|109666233:+_chr1:109667063|109667238:+","UN_GSTM4_LS0067","GSTM4","protein coding gene","no",3.5,0,0,0.006,58,0,0,"0(0)","PAAD","no","TE_intersect_:109666100|chr1|109666100|109666305|AluJb:Alu:SINE|156|-","TE_intersect_:109666948|chr1|109666948|109667160|MER20:hAT-Charlie:DNA|225|-","intron_intersect_chr1:109665496|109668022","intron_intersect_chr1:109665496|109668022"]
["chr1:109693225|109693376:-","chr1:109693117|109693225:-_chr1:109693376|109693742:-","UN_GSTM1_LS0012","GSTM1","protein coding gene","no",10.96,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109693117|109693466","exon_intersect_chr1:109693117|109693466"]
["chr1:109751351|109751460:-","chr1:109750046|109750402:-_chr1:109750660|109750792:-_chr1:109751278|109751351:-_chr1:109751460|109751529:-_chr1:109751654|109751782:-_chr1:109751995|109752150:-_chr1:109752686|109752720:-_chr1:109753117|109753198:-_chr1:109757017|109757165:-_chr1:109757481|109757555:-_chr1:109757802|109757863:-_chr1:109757944|109758058:-_chr1:109758316|109758431:-_chr1:109758524|109758663:-_chr1:109759062|109759117:-_chr1:109759238|109759387:-_chr1:109759678|109760079:-_chr1:109761495|109761559:-_chr1:109761719|109761773:-_chr1:109763822|109763987:-_chr1:109766166|109766203:-","UN_EPS8L3_LS0002","EPS8L3","protein coding gene","no",2.53,0,0,0.009,82,0,0,"0(0)","CHOL;PAAD;READ","no","NA","NA","exon_intersect_chr1:109751278|109751940","exon_intersect_chr1:109751278|109751940"]
["chr1:109751529|109751654:-","chr1:109751395|109751529:-_chr1:109751654|109751782:-_chr1:109751995|109752193:-_chr1:109752686|109752720:-_chr1:109753117|109753198:-_chr1:109757017|109757165:-_chr1:109757481|109757555:-_chr1:109757802|109757863:-_chr1:109757944|109758058:-_chr1:109758316|109758431:-_chr1:109758524|109758663:-_chr1:109759062|109759117:-_chr1:109759238|109759387:-_chr1:109759678|109759836:-_chr1:109761495|109761559:-_chr1:109761719|109761773:-_chr1:109763822|109763904:-","UN_EPS8L3_LS0003","EPS8L3","protein coding gene","no",4.84,0,0,0.007,71,0,0,"0(0)","PAAD;READ","no","NA","NA","exon_intersect_chr1:109751278|109751940","exon_intersect_chr1:109751278|109751940"]
["chr1:109789684|109792191:-","chr1:109787692|109788409:-_chr1:109789594|109789684:-_chr1:109792191|109792404:-","UN_EPS8L3_UP_LS0007","EPS8L3","protein coding gene","no",3.17,0,0,0.008,72,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:109793122|109812097:+","chr1:109792532|109793122:+_chr1:109812097|109813808:+","UN_LINC01768_UP_LS0011","LINC01768","lncRNA gene","no",6.88,0,0,0.004,36,0,0,"0(0)","OV","no","TE_intersect_:109793000|chr1|109793000|109793160|MIR:MIR:SINE|266|-","NA","NA","NA"]
["chr1:109853238|109875908:-","chr1:109850613|109853238:-_chr1:109875908|109875969:-_chr1:109876762|109876830:-_chr1:109892305|109892508:-","UN_NDUFA5P10_UP_LS0004","NDUFA5P10","pseudogene","no",1.19,0,0,0.006,58,0,0,"0(0)","OV","no","TE_intersect_:109875907|chr1|109875907|109876087|L1M5:L1:LINE|301|+","TE_intersect_:109852977|chr1|109852977|109853265|HERV17-int:ERV1:LTR|52|-","NA","intron_intersect_chr1:109833415|109871368"]
["chr1:109875969|109876762:-","chr1:109850613|109853238:-_chr1:109875908|109875969:-_chr1:109876762|109876830:-_chr1:109892305|109892508:-","UN_NDUFA5P10_UP_LS0005","NDUFA5P10","pseudogene","no",1.78,0,0,0.006,58,0,0,"0(0)","OV","no","TE_intersect_:109876634|chr1|109876634|109876820|L1ME4a:L1:LINE|350|-","TE_intersect_:109875907|chr1|109875907|109876087|L1M5:L1:LINE|301|+","NA","NA"]
["chr1:109876830|109892305:-","chr1:109850613|109853238:-_chr1:109875908|109875969:-_chr1:109876762|109876830:-_chr1:109892305|109892508:-","UN_NDUFA5P10_UP_LS0007","NDUFA5P10","pseudogene","no",2.15,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:109884585|109892305:-","chr1:109884164|109884585:-_chr1:109892305|109892625:-","UN_NDUFA5P10_UP_LS0009","NDUFA5P10","pseudogene","no",1.75,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","NA","intron_intersect_chr1:109884585|109886225"]
["chr1:109886386|109892305:-","chr1:109884164|109884585:-_chr1:109886225|109886386:-_chr1:109892305|109892625:-","UN_AL450468.1_UP_LS0002","AL450468.1","lncRNA gene","no",1.29,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:109886474|109892305:-","chr1:109884164|109884585:-_chr1:109886225|109886474:-_chr1:109892305|109892625:-","UN_AL450468.1_UP_LS0003","AL450468.1","lncRNA gene","no",1.76,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:109929800|109930206:-","chr1:109929164|109929354:-_chr1:109929453|109929800:-_chr1:109930206|109930498:-_chr1:109930536|109930729:-","UN_CSF1_LS0090","CSF1","protein coding gene","yes",1.81,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109928852|109930992","exon_intersect_chr1:109928852|109930992"]
["chr1:109930026|109930156:-","chr1:109928905|109929058:-_chr1:109929584|109929726:-_chr1:109929914|109930026:-_chr1:109930156|109930327:-_chr1:109930388|109930627:-","UN_CSF1_LS0097","CSF1","protein coding gene","yes",2.46,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109928852|109930992","exon_intersect_chr1:109928852|109930992"]
["chr1:109930078|109930156:-","chr1:109929901|109930078:-_chr1:109930156|109930327:-","UN_CSF1_LS0099","CSF1","protein coding gene","yes",2.17,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109928852|109930992","exon_intersect_chr1:109928852|109930992"]
["chr1:109930498|109930536:-","chr1:109929164|109929354:-_chr1:109929453|109929789:-_chr1:109930206|109930498:-_chr1:109930536|109930729:-","UN_CSF1_LS0124","CSF1","protein coding gene","yes",3.76,0,0,0.005,48,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:109928852|109930992","exon_intersect_chr1:109928852|109930992"]
["chr1:109941644|109979895:-","chr1:109937458|109941644:-_chr1:109979895|109980020:-","UN_AL450468.1_UP_LS0006","AL450468.1","lncRNA gene","no",1.25,0,0,0.002,19,0,0,"0(0)","OV","no","NA","TE_intersect_:109941628|chr1|109941628|109941706|MIR3:MIR:SINE|234|+","NA","NA"]
["chr1:109977971|109979895:-","chr1:109976408|109977971:-_chr1:109979895|109980020:-","UN_AL450468.1_UP_LS0010","AL450468.1","lncRNA gene","no",0.89,0,0,0.002,20,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:109979252|109979895:-","chr1:109979142|109979252:-_chr1:109979895|109980065:-","UN_AL450468.1_UP_LS0012","AL450468.1","lncRNA gene","no",4.07,0,0,0.014,138,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:110018650|110018875:+","chr1:109985015|109985172:+_chr1:110009034|110009145:+_chr1:110011214|110011357:+_chr1:110012362|110012462:+_chr1:110012897|110012999:+_chr1:110014763|110014857:+_chr1:110015425|110015531:+_chr1:110016344|110016460:+_chr1:110016667|110016730:+_chr1:110017495|110017583:+_chr1:110017946|110018016:+_chr1:110018373|110018467:+_chr1:110018552|110018650:+_chr1:110018875|110019119:+_chr1:110019548|110019626:+_chr1:110020731|110020851:+_chr1:110021674|110023735:+","UN_AHCYL1_LS0015","AHCYL1","protein coding gene","yes",4.43,0,0,0.01,93,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:110018552|110019119","exon_intersect_chr1:110018552|110019119"]
["chr1:110047869|110050343:+","chr1:110047770|110047869:+_chr1:110050343|110050409:+_chr1:110050956|110051060:+_chr1:110051683|110051887:+_chr1:110053665|110054641:+","UN_STRIP1_LS0015","STRIP1","protein coding gene","no",6.39,0,0,0.007,67,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:110047772|110048304","exon_intersect_chr1:110049112|110050409"]
["chr1:110070947|110072418:+","chr1:110070765|110070947:+_chr1:110072418|110072596:+_chr1:110074127|110074330:+_chr1:110084918|110085201:+","UN_STRIP1_LS0034","STRIP1","protein coding gene","no",1.77,0,0,0.005,52,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:110070700|110072455","intron_intersect_chr1:110070700|110072455"]
["chr1:110074330|110084918:+","chr1:110070765|110070947:+_chr1:110072418|110072596:+_chr1:110074127|110074330:+_chr1:110084918|110085201:+","UN_UBL4B_UP_LS0002","UBL4B","protein coding gene","no",3.12,0,0,0.004,38,0,0,"0(0)","GBM;UCS","no","NA","NA","exon_intersect_chr1:110074127|110074641","intron_intersect_chr1:110082852|110108845"]
["chr1:110083518|110084918:+","chr1:110082826|110082852:+_chr1:110083404|110083518:+_chr1:110084918|110085204:+","UN_LINC01397_LS0004","LINC01397","lncRNA gene","no",3.81,0,0,0.006,58,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:110082852|110108845","intron_intersect_chr1:110082852|110108845"]
["chr1:110130427|110132741:+","chr1:110130357|110130427:+_chr1:110132741|110134710:+","UN_SLC6A17_UP_LS0001","SLC6A17","protein coding gene","no",1.9,0,0,0.01,93,0,0,"0(0)","SKCM;UVM","no","NA","NA","NA","NA"]
["chr1:110130461|110132741:+","chr1:110130172|110130461:+_chr1:110132741|110134214:+","UN_SLC6A17_UP_LS0002","SLC6A17","protein coding gene","no",2.56,0,0,0.02,191,0,0,"0(0)","SKCM;UVM","no","NA","NA","NA","NA"]
["chr1:110132901|110135631:+","chr1:110130383|110130461:+_chr1:110132741|110132901:+_chr1:110135631|110135853:+_chr1:110137004|110137111:+_chr1:110137783|110138804:+","UN_SLC6A17_UP_LS0003","SLC6A17","protein coding gene","no",3.85,0,0,0.006,53,0,0,"0(0)","SKCM;UVM","no","NA","NA","NA","NA"]
["chr1:110134543|110135631:+","chr1:110129183|110130461:+_chr1:110132741|110134543:+_chr1:110135631|110135853:+_chr1:110137004|110137111:+_chr1:110137783|110138871:+","UN_SLC6A17_UP_LS0005","SLC6A17","protein coding gene","no",1.67,0,0,0.002,17,0,0,"0(0)","UVM","no","NA","NA","NA","NA"]
["chr1:110135853|110137004:+","chr1:110135406|110135535:+_chr1:110135631|110135853:+_chr1:110137004|110137111:+_chr1:110137783|110138873:+","UN_SLC6A17_UP_LS0008","SLC6A17","protein coding gene","no",6.36,0,0,0.015,142,0,0,"0(0)","PCPG;SKCM;UVM","no","NA","NA","NA","NA"]
["chr1:110137111|110137783:+","chr1:110135406|110135535:+_chr1:110135631|110135853:+_chr1:110137004|110137111:+_chr1:110137783|110138873:+","UN_SLC6A17_UP_LS0010","SLC6A17","protein coding gene","no",5.45,0,0,0.018,171,0,0,"0(0)","PCPG;SKCM;UVM","no","NA","TE_intersect_:110137688|chr1|110137688|110137804|MIRb:MIR:SINE|242|-","NA","NA"]
["chr1:110194771|110195633:+","chr1:110192568|110192698:+_chr1:110194579|110194771:+_chr1:110195633|110195745:+_chr1:110197437|110197599:+_chr1:110198076|110202202:+","UN_SLC6A17_LS0004","SLC6A17","protein coding gene","no",12.96,0,0,0.005,47,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:110194579|110194988","exon_intersect_chr1:110195586|110195745"]
["chr1:110208834|110208917:-","chr1:110208448|110208834:-_chr1:110208917|110209204:-_chr1:110212279|110212301:-","UN_LINC02586_LS0001","LINC02586","lncRNA gene","no",2.9,0,0,0.004,41,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr1:110208834|110209204","exon_intersect_chr1:110208834|110209204"]
["chr1:110215330|110222964:+","chr1:110215219|110215330:+_chr1:110222964|110223900:+_chr1:110225975|110226178:+_chr1:110232221|110234041:+","UN_KCNC4_LS0005","KCNC4","protein coding gene","no",2.19,0,0,0.002,18,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:110212177|110219716","exon_intersect_chr1:110219716|110226178"]
["chr1:11023173|11023618:-","chr1:11023146|11023173:-_chr1:11023618|11023878:-","UN_AL109811.4_LS0021","AL109811.4","protein coding gene","no",7.06,0,0,0.006,57,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:11022124|11026420","exon_intersect_chr1:11022124|11026420"]
["chr1:110369207|110369353:-","chr1:110361363|110369207:-_chr1:110369353|110370142:-","UN_SLC16A4_LS0013","SLC16A4","protein coding gene","no",2.46,0,0,0.005,45,0,0,"0(0)","ESCA;LAML","no","TE_intersect_:110369317|chr1|110369317|110369610|AluSz:Alu:SINE|119|+","TE_intersect_:110368956|chr1|110368956|110369252|AluSg:Alu:SINE|101|-","intron_intersect_chr1:110363913|110370154","intron_intersect_chr1:110363913|110370154"]
["chr1:110488044|110488523:+","chr1:110487948|110488044:+_chr1:110488523|110488634:+_chr1:110490172|110490270:+_chr1:110491034|110491278:+","UN_CYMP_LS0004","CYMP","pseudogene","no",1.96,0,0,0.007,64,0,0,"0(0)","PAAD;STAD","no","NA","NA","exon_intersect_chr1:110487680|110489907","exon_intersect_chr1:110487680|110489907"]
["chr1:110488746|110490172:+","chr1:110480660|110480827:+_chr1:110486886|110487085:+_chr1:110488579|110488746:+_chr1:110490172|110490270:+_chr1:110491034|110491270:+","UN_CYMP_LS0008","CYMP","pseudogene","no",2.75,0,0,0.006,59,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr1:110487680|110489907","exon_intersect_chr1:110490136|110490258"]
["chr1:11054779|11054826:+","chr1:11054598|11054779:+_chr1:11054826|11054872:+","UN_SRM_LS0010","SRM","protein coding gene","no",10.77,0.07,0,0.023,216,0.004,3,"0(0)","DLBC","no","NA","NA","exon_intersect_chr1:11054584|11055204","exon_intersect_chr1:11054584|11055204"]
["chr1:11055084|11056011:-","chr1:11054589|11054885:-_chr1:11054962|11055084:-_chr1:11056011|11056094:-_chr1:11056604|11056757:-_chr1:11058800|11058873:-","UN_SRM_LS0028","SRM","protein coding gene","no",28.27,0,0,0.004,34,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:11056011|11056094","exon_intersect_chr1:11054584|11055204"]
["chr1:110615744|110631369:-","chr1:110615403|110615744:-_chr1:110631369|110631435:-","UN_KCNA2_LS0011","KCNA2","protein coding gene","no",1.98,0,0,0.003,32,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:110607429|110631395","intron_intersect_chr1:110607429|110631395"]
["chr1:110750998|110752338:-","chr1:110748789|110750998:-_chr1:110752338|110752446:-_chr1:110763747|110763785:-_chr1:110764551|110764757:-_chr1:110764893|110765005:-","UN_KCNA3_UP_LS0001","KCNA3","protein coding gene","no",3.45,0,0,0.011,108,0,0,"0(0)","KIRC;PCPG;THCA","no","NA","NA","NA","NA"]
["chr1:110752446|110752988:-","chr1:110748793|110750998:-_chr1:110752338|110752446:-_chr1:110752988|110753104:-_chr1:110763747|110763785:-_chr1:110764551|110764757:-_chr1:110764893|110765036:-","UN_KCNA3_UP_LS0002","KCNA3","protein coding gene","no",2.61,0,0,0.006,54,0,0,"0(0)","PCPG","no","NA","TE_intersect_:110752347|chr1|110752347|110752458|L2c:L2:LINE|240|+","NA","NA"]
["chr1:110763785|110764551:-","chr1:110748789|110750998:-_chr1:110752338|110752446:-_chr1:110763747|110763785:-_chr1:110764551|110764757:-_chr1:110764893|110765005:-","UN_KCNA3_UP_LS0008","KCNA3","protein coding gene","no",3.46,0,0,0.007,66,0,0,"0(0)","DLBC;PCPG","no","TE_intersect_:110764506|chr1|110764506|110764814|HAL1:L1:LINE|293|+","TE_intersect_:110763130|chr1|110763130|110764410|HAL1:L1:LINE|293|+","NA","NA"]
["chr1:110764757|110764893:-","chr1:110748789|110750998:-_chr1:110752338|110752446:-_chr1:110763747|110763785:-_chr1:110764551|110764757:-_chr1:110764893|110765005:-","UN_RF00019_UP_LS0001","RF00019","small non-coding RNA gene","no",2.82,0,0,0.003,26,0,0,"0(0)","DLBC;PCPG","no","TE_intersect_:110764850|chr1|110764850|110765244|MER57B2:ERV1:LTR|183|-","TE_intersect_:110764506|chr1|110764506|110764814|HAL1:L1:LINE|293|+","NA","NA"]
["chr1:110877685|110890726:-","chr1:110877048|110877685:-_chr1:110890726|110890844:-_chr1:110927554|110927700:-","UN_CD53_LS0007","CD53","protein coding gene","no",2.53,0,0,0.012,117,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:110880332|110891392","intron_intersect_chr1:110873248|110880237"]
["chr1:110877685|110927554:-","chr1:110877068|110877685:-_chr1:110927554|110927662:-","UN_NRBF2P3_UP_LS0001","NRBF2P3","pseudogene","no",2.25,0,0,0.006,62,0,0,"0(0)","TGCT","no","TE_intersect_:110927198|chr1|110927198|110927818|MLT2F:ERVL:LTR|248|-","NA","NA","intron_intersect_chr1:110873248|110880237"]
["chr1:110890844|110927554:-","chr1:110877048|110877685:-_chr1:110890726|110890844:-_chr1:110927554|110927700:-","UN_NRBF2P3_UP_LS0003","NRBF2P3","pseudogene","no",4.25,0,0,0.008,73,0,0,"0(0)","TGCT","no","TE_intersect_:110927198|chr1|110927198|110927818|MLT2F:ERVL:LTR|248|-","TE_intersect_:110890749|chr1|110890749|110890883|L2c:L2:LINE|315|+","NA","intron_intersect_chr1:110880332|110891392"]
["chr1:111184343|111186129:-","chr1:111183584|111184343:-_chr1:111186129|111187681:-_chr1:111188131|111188370:-_chr1:111188702|111188786:-_chr1:111189212|111189253:-_chr1:111192140|111192317:-_chr1:111194578|111194726:-_chr1:111195916|111196056:-_chr1:111197176|111197253:-_chr1:111197920|111197989:-_chr1:111198630|111198742:-_chr1:111199623|111199798:-_chr1:111204296|111204556:-","UN_AL355816.1_UP_LS0001","AL355816.1","lncRNA gene","no",1.47,0.04,0,0.006,53,0.001,1,"0(0)","LAML","no","TE_intersect_:111186124|chr1|111186124|111186241|MER5B:hAT-Charlie:DNA|325|-","NA","NA","exon_intersect_chr1:111184191|111185102"]
["chr1:111234490|111234907:+","chr1:111234230|111234490:+_chr1:111234907|111235057:+_chr1:111235639|111235763:+_chr1:111236024|111236153:+_chr1:111238750|111238932:+_chr1:111241327|111241443:+_chr1:111242227|111242366:+_chr1:111243217|111243432:+","UN_CHI3L2_LS0007","CHI3L2","protein coding gene","no",4.53,0,0,0.007,70,0,0,"0(0)","TGCT","no","TE_intersect_:111234205|chr1|111234205|111234660|MER31B:ERV1:LTR|236|-","NA","intron_intersect_chr1:111231472|111234907","exon_intersect_chr1:111234907|111235057"]
["chr1:111250375|111251760:+","chr1:111250258|111250375:+_chr1:111251760|111251884:+_chr1:111252414|111252544:+_chr1:111256487|111256939:+","UN_CHIAP1_LS0001","CHIAP1","pseudogene","no",2.03,0,0,0.004,38,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:111250300|111251014","exon_intersect_chr1:111251760|111251884"]
["chr1:111251884|111252414:+","chr1:111251743|111251884:+_chr1:111252414|111252544:+_chr1:111256487|111256780:+","UN_CHIAP1_LS0002","CHIAP1","pseudogene","no",3,0,0,0.007,70,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:111251884|111252420","intron_intersect_chr1:111251884|111252420"]
["chr1:111252544|111256487:+","chr1:111251743|111251884:+_chr1:111252414|111252544:+_chr1:111256487|111256780:+","UN_CHIAP1_LS0005","CHIAP1","pseudogene","no",3.08,0,0,0.006,61,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:111252496|111253318","intron_intersect_chr1:111255444|111256552"]
["chr1:111361848|111363508:-","chr1:111356849|111357615:-_chr1:111361728|111361848:-_chr1:111363508|111363632:-_chr1:111370604|111371249:-","UN_CHIAP3_LS0004","CHIAP3","pseudogene","no",3.76,0,0,0.006,53,0,0,"0(0)","GBM;SARC","no","NA","TE_intersect_:111361415|chr1|111361415|111362383|LTR5B:ERVK:LTR|86|-","exon_intersect_chr1:111363508|111363632","intron_intersect_chr1:111360944|111363508"]
["chr1:111363632|111368464:-","chr1:111361519|111361848:-_chr1:111363508|111363632:-_chr1:111368464|111368493:-_chr1:111370604|111372456:-","UN_AL356387.1_UP_LS0001","AL356387.1","lncRNA gene","no",4.68,0,0,0.005,45,0,0,"0(0)","GBM;SARC","no","NA","NA","NA","intron_intersect_chr1:111363632|111365091"]
["chr1:111363632|111370604:-","chr1:111356849|111357615:-_chr1:111361728|111361848:-_chr1:111363508|111363632:-_chr1:111370604|111371249:-","UN_AL356387.1_UP_LS0002","AL356387.1","lncRNA gene","no",7.1,0,0,0.003,32,0,0,"0(0)","SARC","no","TE_intersect_:111370494|chr1|111370494|111370892|MLT1F:ERVL-MaLR:LTR|188|-","NA","NA","intron_intersect_chr1:111363632|111365091"]
["chr1:111368493|111370604:-","chr1:111361519|111361848:-_chr1:111363508|111363632:-_chr1:111368464|111368493:-_chr1:111370604|111372456:-","UN_CHIAP3_UP_LS0002","CHIAP3","pseudogene","no",3.85,0,0,0.004,43,0,0,"0(0)","GBM;SARC","no","TE_intersect_:111370494|chr1|111370494|111370892|MLT1F:ERVL-MaLR:LTR|188|-","NA","NA","NA"]
["chr1:111441267|111441338:+","chr1:111441177|111441267:+_chr1:111441338|111441472:+","UN_WDR77_LS0010","WDR77","protein coding gene","no",1.6,0,0,0.008,77,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:111439890|111441389","exon_intersect_chr1:111439890|111441389"]
["chr1:111542509|111565858:+","chr1:111542184|111542509:+_chr1:111565858|111566560:+","UN_RAP1A_LS0002","RAP1A","protein coding gene","yes",2.79,0,0,0.004,34,0,0,"0(0)","TGCT","no","NA","TE_intersect_:111565769|chr1|111565769|111565860|MER33:hAT-Charlie:DNA|100|+","intron_intersect_chr1:111542509|111563846","intron_intersect_chr1:111563962|111599655"]
["chr1:111604702|111608052:-","chr1:111604380|111604500:-_chr1:111604629|111604702:-_chr1:111608052|111608318:-","UN_RAP1A_LS0011","RAP1A","protein coding gene","yes",3.11,0,0,0.006,60,0,0,"0(0)","TGCT","no","TE_intersect_:111607038|chr1|111607038|111608899|SVA_D:SVA:Retroposon|71|-","NA","intron_intersect_chr1:111604702|111608136","intron_intersect_chr1:111604702|111608136"]
["chr1:111608212|111608253:-","chr1:111604380|111604500:-_chr1:111604629|111604702:-_chr1:111608136|111608212:-_chr1:111608253|111608318:-","UN_RAP1A_LS0017","RAP1A","protein coding gene","yes",4.41,0,0,0.007,64,0,0,"0(0)","TGCT","no","TE_intersect_:111607038|chr1|111607038|111608899|SVA_D:SVA:Retroposon|71|-","TE_intersect_:111607038|chr1|111607038|111608899|SVA_D:SVA:Retroposon|71|-","exon_intersect_chr1:111608136|111608723","exon_intersect_chr1:111608136|111608723"]
["chr1:111608212|111608369:-","chr1:111608110|111608212:-_chr1:111608369|111608527:-","UN_RAP1A_LS0018","RAP1A","protein coding gene","yes",2.86,0,0,0.004,37,0,0,"0(0)","STAD","no","TE_intersect_:111607038|chr1|111607038|111608899|SVA_D:SVA:Retroposon|71|-","TE_intersect_:111607038|chr1|111607038|111608899|SVA_D:SVA:Retroposon|71|-","exon_intersect_chr1:111608136|111608723","exon_intersect_chr1:111608136|111608723"]
["chr1:111740098|111744375:+","chr1:111739853|111740098:+_chr1:111744375|111744529:+_chr1:111746060|111747794:+","UN_AL049557.1_LS0009","AL049557.1","protein coding gene","no",2.31,0,0,0.008,80,0,0,"0(0)","GBM;LGG;UCS","no","TE_intersect_:111739964|chr1|111739964|111740156|L2a:L2:LINE|289|-","NA","intron_intersect_chr1:111740077|111744375","exon_intersect_chr1:111744375|111744529"]
["chr1:112294177|112294445:+","chr1:112292757|112293534:+_chr1:112294084|112294177:+_chr1:112294445|112295056:+","UN_AL445426.1_LS0025","AL445426.1","lncRNA gene","no",1.15,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:112293773|chr1|112293773|112295042|SVA_E:SVA:Retroposon|66|+","TE_intersect_:112293773|chr1|112293773|112295042|SVA_E:SVA:Retroposon|66|+","intron_intersect_chr1:112177613|112360362","intron_intersect_chr1:112177613|112360362"]
["chr1:112508495|112509028:+","chr1:112507392|112508495:+_chr1:112509028|112509444:+_chr1:112514874|112515094:+_chr1:112516140|112516417:+_chr1:112517121|112517385:+_chr1:112520280|112530164:+","UN_WNT2B_LS0010","WNT2B","protein coding gene","no",0.75,0,0,0.001,11,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:112491081|112508778","exon_intersect_chr1:112508778|112509444"]
["chr1:112509444|112509720:+","chr1:112508876|112509444:+_chr1:112509720|112509764:+_chr1:112514874|112515094:+_chr1:112516140|112516417:+","UN_WNT2B_LS0013","WNT2B","protein coding gene","no",2.16,0,0,0.003,26,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:112509444|112514752","intron_intersect_chr1:112509444|112514752"]
["chr1:112509764|112514874:+","chr1:112508876|112509444:+_chr1:112509720|112509764:+_chr1:112514874|112515094:+_chr1:112516140|112516417:+","UN_WNT2B_LS0014","WNT2B","protein coding gene","no",3.07,0,0,0.004,42,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:112509444|112514752","exon_intersect_chr1:112514752|112515094"]
["chr1:112653364|112653598:+","chr1:112619819|112619883:+_chr1:112647210|112647273:+_chr1:112649418|112653364:+_chr1:112653598|112653661:+_chr1:112654465|112654671:+_chr1:112659022|112659101:+_chr1:112659701|112659779:+_chr1:112667074|112667145:+_chr1:112669543|112669605:+_chr1:112669992|112671619:+","UN_CAPZA1_LS0005","CAPZA1","protein coding gene","no",44.82,0,0,0.005,47,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr1:112650013|112653598","exon_intersect_chr1:112653598|112653661"]
["chr1:112722118|112722233:+","chr1:112722046|112722118:+_chr1:112722233|112722433:+_chr1:112723016|112723165:+_chr1:112724013|112724137:+_chr1:112726629|112731628:+","UN_FAM19A3_LS0001","FAM19A3","protein coding gene","no",0.9,0,0,0.001,11,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:112720634|112722233","exon_intersect_chr1:112722233|112722348"]
["chr1:112722348|112723027:+","chr1:112718963|112719299:+_chr1:112720577|112720634:+_chr1:112722233|112722348:+_chr1:112723027|112723165:+_chr1:112723945|112724137:+_chr1:112726629|112727235:+","UN_FAM19A3_LS0002","FAM19A3","protein coding gene","no",14.55,0,0,0.003,28,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:112722348|112723016","exon_intersect_chr1:112723016|112723165"]
["chr1:112723165|112726629:+","chr1:112723121|112723165:+_chr1:112726629|112727229:+","UN_FAM19A3_LS0008","FAM19A3","protein coding gene","no",1.88,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:112723165|112723945","exon_intersect_chr1:112726629|112727235"]
["chr1:112773625|112773803:+","chr1:112773445|112773625:+_chr1:112773803|112773847:+_chr1:112774025|112774994:+","UN_AL390729.1_UP_LS0009","AL390729.1","lncRNA gene","no",2.05,0,0,0.008,72,0,0,"0(0)","ESCA","no","TE_intersect_:112773445|chr1|112773445|112773993|SVA_F:SVA:Retroposon|104|+","TE_intersect_:112773445|chr1|112773445|112773993|SVA_F:SVA:Retroposon|104|+","NA","NA"]
["chr1:112773625|112773979:+","chr1:112773446|112773625:+_chr1:112773979|112774024:+_chr1:112774380|112774988:+","UN_AL390729.1_UP_LS0010","AL390729.1","lncRNA gene","no",1.17,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:112773445|chr1|112773445|112773993|SVA_F:SVA:Retroposon|104|+","TE_intersect_:112773445|chr1|112773445|112773993|SVA_F:SVA:Retroposon|104|+","NA","NA"]
["chr1:112773625|112774333:+","chr1:112773449|112773625:+_chr1:112774333|112775042:+","UN_AL390729.1_UP_LS0011","AL390729.1","lncRNA gene","no",0.91,0,0,0.001,13,0,0,"0(0)","ESCA","no","TE_intersect_:112773445|chr1|112773445|112773993|SVA_F:SVA:Retroposon|104|+","TE_intersect_:112773993|chr1|112773993|112774980|SVA_F:SVA:Retroposon|47|+","NA","NA"]
["chr1:112773929|112774333:+","chr1:112773446|112773625:+_chr1:112773803|112773929:+_chr1:112774333|112774969:+","UN_AL390729.1_UP_LS0016","AL390729.1","lncRNA gene","no",1.62,0,0,0.002,18,0,0,"0(0)","ESCA","no","TE_intersect_:112773445|chr1|112773445|112773993|SVA_F:SVA:Retroposon|104|+","TE_intersect_:112773993|chr1|112773993|112774980|SVA_F:SVA:Retroposon|47|+","NA","NA"]
["chr1:112773978|112774333:+","chr1:112773449|112773978:+_chr1:112774333|112774954:+","UN_AL390729.1_UP_LS0018","AL390729.1","lncRNA gene","no",2.31,0,0,0.001,14,0,0,"0(0)","ESCA","no","TE_intersect_:112773445|chr1|112773445|112773993|SVA_F:SVA:Retroposon|104|+","TE_intersect_:112773993|chr1|112773993|112774980|SVA_F:SVA:Retroposon|47|+","NA","NA"]
["chr1:112774024|112774202:+","chr1:112773380|112773625:+_chr1:112773803|112774024:+_chr1:112774202|112774283:+_chr1:112774333|112774952:+","UN_AL390729.1_UP_LS0019","AL390729.1","lncRNA gene","no",1.65,0,0,0.004,34,0,0,"0(0)","ESCA","no","TE_intersect_:112773993|chr1|112773993|112774980|SVA_F:SVA:Retroposon|47|+","TE_intersect_:112773993|chr1|112773993|112774980|SVA_F:SVA:Retroposon|47|+","NA","NA"]
["chr1:112774283|112774333:+","chr1:112773380|112773625:+_chr1:112773803|112774024:+_chr1:112774202|112774283:+_chr1:112774333|112774952:+","UN_AL390729.1_UP_LS0022","AL390729.1","lncRNA gene","no",1.31,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:112773993|chr1|112773993|112774980|SVA_F:SVA:Retroposon|47|+","TE_intersect_:112773993|chr1|112773993|112774980|SVA_F:SVA:Retroposon|47|+","NA","NA"]
["chr1:112810228|112816345:+","chr1:112809817|112810228:+_chr1:112816345|112816446:+_chr1:112826350|112826648:+","UN_AL390729.1_UP_LS0032","AL390729.1","lncRNA gene","no",10.28,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:112810082|chr1|112810082|112810549|HERVH-int:ERV1:LTR|98|+","TE_intersect_:112816314|chr1|112816314|112816601|AluSp:Alu:SINE|104|-","NA","NA"]
["chr1:112819321|112830708:+","chr1:112819234|112819321:+_chr1:112830708|112832772:+","UN_AL390729.1_UP_LS0038","AL390729.1","lncRNA gene","no",1.93,0,0,0.002,21,0,0,"0(0)","UVM","no","TE_intersect_:112819285|chr1|112819285|112819421|Tigger19a:TcMar-Tigger:DNA|228|+","TE_intersect_:112827509|chr1|112827509|112831188|Harlequin-int:ERV1:LTR|72|+","NA","intron_intersect_chr1:112828511|112840488"]
["chr1:112823846|112825513:-","chr1:112820143|112823846:-_chr1:112825513|112826195:-","UN_LINC01356_LS0006","LINC01356","lncRNA gene","no",0.94,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:112823541|chr1|112823541|112825658|HERVH-int:ERV1:LTR|123|-","TE_intersect_:112823541|chr1|112823541|112825658|HERVH-int:ERV1:LTR|123|-","exon_intersect_chr1:112825513|112825672","intron_intersect_chr1:112823754|112825513"]
["chr1:112825672|112825823:-","chr1:112820290|112820541:-_chr1:112823653|112823754:-_chr1:112825513|112825672:-_chr1:112825823|112828668:-","UN_LINC01356_LS0007","LINC01356","lncRNA gene","no",3.77,0,0,0.004,34,0,0,"0(0)","TGCT","no","TE_intersect_:112825660|chr1|112825660|112826054|LTR7:ERV1:LTR|99|-","TE_intersect_:112825660|chr1|112825660|112826054|LTR7:ERV1:LTR|99|-","intron_intersect_chr1:112825672|112828477","intron_intersect_chr1:112825672|112828477"]
["chr1:112898398|112898624:-","chr1:112897609|112898398:-_chr1:112898624|112899857:-","UN_AL390729.2_UP_LS0008","AL390729.2","pseudogene","no",2.19,0,0,0.005,44,0,0,"0(0)","ESCA","no","TE_intersect_:112897624|chr1|112897624|112899310|SVA_F:SVA:Retroposon|70|-","TE_intersect_:112897624|chr1|112897624|112899310|SVA_F:SVA:Retroposon|70|-","NA","NA"]
["chr1:112956956|112957559:+","chr1:112956590|112956956:+_chr1:112957559|112957708:+","UN_SLC16A1-AS1_LS0003","SLC16A1-AS1","lncRNA gene","no",1.44,0,0,0.009,89,0,0,"0(0)","ESCA","no","NA","TE_intersect_:112957539|chr1|112957539|112957625|MIRb:MIR:SINE|314|-","exon_intersect_chr1:112956839|112957013","exon_intersect_chr1:112956415|112957722"]
["chr1:113006172|113006837:+","chr1:113005607|113006172:+_chr1:113006837|113008655:+","UN_SLC16A1-AS1_LS0028","SLC16A1-AS1","lncRNA gene","no",3.72,0,0,0.002,22,0,0,"0(0)","ESCA","no","TE_intersect_:113006166|chr1|113006166|113006457|AluSx:Alu:SINE|107|+","TE_intersect_:113006573|chr1|113006573|113006858|AluY:Alu:SINE|60|-","NA","NA"]
["chr1:113071932|113091318:+","chr1:113071826|113071932:+_chr1:113091318|113091383:+_chr1:113093206|113093280:+_chr1:113093430|113093564:+_chr1:113094339|113094482:+_chr1:113094612|113094755:+_chr1:113095874|113096017:+_chr1:113096222|113096365:+_chr1:113098705|113098785:+_chr1:113100211|113100282:+_chr1:113100420|113100488:+_chr1:113107594|113107757:+_chr1:113110242|113110562:+_chr1:113112479|113112760:+_chr1:113114427|113114876:+_chr1:113116287|113116436:+_chr1:113119233|113119523:+_chr1:113123875|113127200:+","UN_AL357055.1_UP_LS0001","AL357055.1","pseudogene","no",2.34,0,0,0.002,23,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:113048561|113072939","exon_intersect_chr1:113091318|113091383"]
["chr1:11312403|11319007:-","chr1:11304768|11306531:-_chr1:11312256|11312403:-_chr1:11319007|11319097:-","UN_AL031291.1_LS0003","AL031291.1","lncRNA gene","no",2.56,0,0,0.002,17,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:11339474|11363783:+","chr1:11339364|11339474:+_chr1:11363783|11363839:+_chr1:11364136|11365033:+","UN_DISP3_UP_LS0004","DISP3","protein coding gene","no",3.54,0,0,0.01,94,0,0,"0(0)","OV;THYM","no","NA","TE_intersect_:11363606|chr1|11363606|11363917|LTR16E1:ERVL:LTR|250|-","NA","NA"]
["chr1:113681336|113682184:+","chr1:113391261|113391349:+_chr1:113549515|113549631:+_chr1:113580542|113580738:+_chr1:113585387|113585596:+_chr1:113590484|113590658:+_chr1:113594481|113594560:+_chr1:113614601|113614658:+_chr1:113618532|113618606:+_chr1:113619736|113619830:+_chr1:113622806|113622994:+_chr1:113641911|113642516:+_chr1:113643743|113643774:+_chr1:113646486|113646642:+_chr1:113649237|113649328:+_chr1:113651014|113651206:+_chr1:113653830|113654018:+_chr1:113659080|113659265:+_chr1:113671734|113671836:+_chr1:113672615|113672741:+_chr1:113673322|113673465:+_chr1:113681198|113681336:+_chr1:113682184|113682302:+_chr1:113682897|113685923:+","UN_MAGI3_LS0056","MAGI3","protein coding gene","no",2.17,0,0,0.013,123,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:113681336|113682212","intron_intersect_chr1:113681336|113682212"]
["chr1:113738799|113739553:-","chr1:113738126|113738268:-_chr1:113738730|113738799:-_chr1:113739553|113749589:-_chr1:113757699|113757755:-_chr1:113758659|113758848:-_chr1:113759023|113759155:-","UN_PHTF1_LS0021","PHTF1","protein coding gene","no",2.74,0,0,0.003,24,0,0,"0(0)","LAML","no","TE_intersect_:113739452|chr1|113739452|113740746|L1MA5:L1:LINE|130|-","NA","intron_intersect_chr1:113738799|113749522","intron_intersect_chr1:113738799|113749522"]
["chr1:11388227|11398006:+","chr1:11387845|11388227:+_chr1:11398006|11398208:+","UN_DISP3_UP_LS0022","DISP3","protein coding gene","no",6.83,0,0,0.005,52,0,0,"0(0)","BRCA","no","NA","TE_intersect_:11397845|chr1|11397845|11398163|L2:L2:LINE|287|+","NA","NA"]
["chr1:113939483|113940382:+","chr1:113939461|113939483:+_chr1:113940382|113941459:+_chr1:113952766|113952889:+_chr1:113954651|113954770:+_chr1:113955563|113955649:+_chr1:113956627|113956811:+_chr1:113957124|113957286:+_chr1:113958066|113958291:+_chr1:113962317|113962438:+_chr1:113963387|113963521:+_chr1:113966130|113966272:+_chr1:113967766|113967948:+_chr1:113968442|113968648:+_chr1:113969956|113970197:+_chr1:113971824|113971954:+_chr1:113973024|113977843:+","UN_HIPK1_LS0008","HIPK1","protein coding gene","no",4.17,0,0,0.002,18,0,0,"0(0)","LAML","no","TE_intersect_:113939400|chr1|113939400|113939612|L2b:L2:LINE|306|-","NA","intron_intersect_chr1:113933234|113940382","exon_intersect_chr1:113940382|113941459"]
["chr1:11395377|11398006:+","chr1:11395118|11395377:+_chr1:11398006|11398213:+","UN_DISP3_UP_LS0025","DISP3","protein coding gene","no",5.71,0,0,0.007,64,0,0,"0(0)","THYM","no","TE_intersect_:11395050|chr1|11395050|11395448|L2c:L2:LINE|334|-","TE_intersect_:11397845|chr1|11397845|11398163|L2:L2:LINE|287|+","NA","NA"]
["chr1:113981224|113981284:-","chr1:113980993|113981224:-_chr1:113981284|113981636:-","UN_OLFML3_LS0009","OLFML3","protein coding gene","no",3.89,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:113980203|113982254","exon_intersect_chr1:113980203|113982254"]
["chr1:113981283|113981415:-","chr1:113981129|113981283:-_chr1:113981415|113981644:-","UN_OLFML3_LS0012","OLFML3","protein coding gene","no",1.69,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:113980203|113982254","exon_intersect_chr1:113980203|113982254"]
["chr1:114015169|114021929:-","chr1:114014923|114015169:-_chr1:114021929|114022042:-_chr1:114022680|114022780:-_chr1:114026726|114026775:-_chr1:114032219|114032303:-","UN_OLFML3_LS0026","OLFML3","protein coding gene","no",4.37,0,0,0.002,22,0,0,"0(0)","TGCT;UCS","no","TE_intersect_:114021839|chr1|114021839|114022391|PABL_A:ERV1:LTR|282|+","NA","NA","NA"]
["chr1:114022042|114022680:-","chr1:114014923|114015169:-_chr1:114021929|114022042:-_chr1:114022680|114022780:-_chr1:114026726|114026775:-_chr1:114032219|114032303:-","UN_OLFML3_LS0027","OLFML3","protein coding gene","no",4.61,0,0,0.002,22,0,0,"0(0)","TGCT;UCS","no","NA","TE_intersect_:114021839|chr1|114021839|114022391|PABL_A:ERV1:LTR|282|+","NA","NA"]
["chr1:114137065|114137495:-","chr1:114131926|114137065:-_chr1:114137495|114138053:-_chr1:114139615|114139880:-_chr1:114153610|114157223:-","UN_SYT6_LS0004","SYT6","protein coding gene","no",3.34,0,0,0.002,19,0,0,"0(0)","TGCT","no","NA","TE_intersect_:114136779|chr1|114136779|114137173|MLT1I:ERVL-MaLR:LTR|241|+","exon_intersect_chr1:114137495|114138053","intron_intersect_chr1:114103721|114137495"]
["chr1:114149852|114152766:-","chr1:114137669|114138053:-_chr1:114139615|114139963:-_chr1:114149667|114149852:-_chr1:114152766|114152917:-","UN_SYT6_LS0014","SYT6","protein coding gene","no",0.35,0,0,0.004,43,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr1:114152623|114152980","intron_intersect_chr1:114139963|114152218"]
["chr1:114331673|114368884:-","chr1:114328091|114331673:-_chr1:114368884|114369358:-","UN_MRPL57P1_UP_LS0001","MRPL57P1","pseudogene","no",3.47,0,0,0.004,43,0,0,"0(0)","TGCT","no","TE_intersect_:114367505|chr1|114367505|114369149|Harlequin-int:ERV1:LTR|158|-","TE_intersect_:114331475|chr1|114331475|114331770|Charlie1a:hAT-Charlie:DNA|239|+","NA","NA"]
["chr1:114366575|114368884:-","chr1:114363026|114366575:-_chr1:114368884|114369467:-","UN_MRPL57P1_UP_LS0002","MRPL57P1","pseudogene","no",1.81,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:114367505|chr1|114367505|114369149|Harlequin-int:ERV1:LTR|158|-","TE_intersect_:114365355|chr1|114365355|114367515|Harlequin-int:ERV1:LTR|49|-","NA","NA"]
["chr1:114582638|114586760:+","chr1:114581657|114582399:+_chr1:114582525|114582638:+_chr1:114586760|114586967:+","UN_RNY1P13_UP_LS0005","RNY1P13","small non-coding RNA gene","no",1.16,0,0,0.008,73,0,0,"0(0)","OV","no","NA","TE_intersect_:114586727|chr1|114586727|114586898|AluJr4:Alu:SINE|155|-","NA","exon_intersect_chr1:114586736|114587473"]
["chr1:114791389|114805256:+","chr1:114789853|114791389:+_chr1:114805256|114805366:+","UN_NR1H5P_UP_LS0002","NR1H5P","pseudogene","no",1.16,0,0,0.003,27,0,0,"0(0)","ESCA","no","TE_intersect_:114789980|chr1|114789980|114791516|SVA_D:SVA:Retroposon|29|-","TE_intersect_:114803829|chr1|114803829|114805378|SVA_C:SVA:Retroposon|33|-","NA","NA"]
["chr1:114802442|114804683:-","chr1:114802139|114802442:-_chr1:114804683|114805354:-","UN_SIKE1_UP_LS0004","SIKE1","protein coding gene","no",4.63,0,0,0.005,50,0,0,"0(0)","TGCT","no","TE_intersect_:114803829|chr1|114803829|114805378|SVA_C:SVA:Retroposon|33|-","TE_intersect_:114802171|chr1|114802171|114802443|AluSx3:Alu:SINE|125|-","NA","NA"]
["chr1:11483191|11500990:+","chr1:11481964|11483191:+_chr1:11500990|11502088:+_chr1:11502678|11502897:+_chr1:11514390|11514526:+_chr1:11515369|11515503:+_chr1:11516001|11516161:+_chr1:11517463|11517602:+_chr1:11519355|11519503:+_chr1:11519719|11519880:+_chr1:11520687|11520848:+_chr1:11523942|11524055:+_chr1:11525176|11525312:+_chr1:11526651|11526835:+_chr1:11529556|11529686:+_chr1:11529787|11529959:+_chr1:11530907|11531033:+_chr1:11531565|11531710:+_chr1:11534381|11534540:+_chr1:11535011|11535124:+_chr1:11535478|11535644:+_chr1:11536324|11537225:+","UN_DISP3_LS0004","DISP3","protein coding gene","no",0.68,0,0,0.004,40,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:11481960|11500990","exon_intersect_chr1:11500990|11502088"]
["chr1:11498575|11499387:-","chr1:11495956|11498575:-_chr1:11499387|11500114:-","UN_DISP3_LS0008","DISP3","protein coding gene","no",1.18,0,0,0.002,15,0,0,"0(0)","GBM","no","NA","TE_intersect_:11498139|chr1|11498139|11498672|MLT1G1:ERVL-MaLR:LTR|268|-","intron_intersect_chr1:11481960|11500990","intron_intersect_chr1:11481960|11500990"]
["chr1:11498694|11499387:-","chr1:11495969|11498694:-_chr1:11499387|11500100:-","UN_DISP3_LS0010","DISP3","protein coding gene","no",2.44,0,0,0.036,341,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:11481960|11500990","intron_intersect_chr1:11481960|11500990"]
["chr1:11520848|11523366:+","chr1:11500976|11502088:+_chr1:11502678|11502897:+_chr1:11514390|11514526:+_chr1:11515369|11515503:+_chr1:11516001|11516161:+_chr1:11517463|11517602:+_chr1:11519355|11519503:+_chr1:11519719|11519880:+_chr1:11520687|11520848:+_chr1:11523366|11523442:+_chr1:11523942|11524055:+_chr1:11525176|11525312:+_chr1:11526651|11526835:+_chr1:11529556|11529686:+_chr1:11529767|11529959:+_chr1:11530912|11531033:+_chr1:11531565|11531710:+_chr1:11534381|11534540:+_chr1:11535011|11535124:+_chr1:11535478|11535644:+_chr1:11536324|11537584:+","UN_DISP3_LS0021","DISP3","protein coding gene","no",4.33,0,0,0.017,165,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:11520848|11523942","intron_intersect_chr1:11520848|11523942"]
["chr1:11523442|11523942:+","chr1:11500976|11502088:+_chr1:11502678|11502897:+_chr1:11514390|11514526:+_chr1:11515369|11515503:+_chr1:11516001|11516161:+_chr1:11517463|11517602:+_chr1:11519355|11519503:+_chr1:11519719|11519880:+_chr1:11520687|11520848:+_chr1:11523366|11523442:+_chr1:11523942|11524055:+_chr1:11525176|11525312:+_chr1:11526651|11526835:+_chr1:11529556|11529686:+_chr1:11529767|11529959:+_chr1:11530912|11531033:+_chr1:11531565|11531710:+_chr1:11534381|11534540:+_chr1:11535011|11535124:+_chr1:11535478|11535644:+_chr1:11536324|11537584:+","UN_DISP3_LS0023","DISP3","protein coding gene","no",3.8,0,0,0.024,230,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:11520848|11523942","exon_intersect_chr1:11523942|11524055"]
["chr1:11527089|11529556:+","chr1:11500918|11502088:+_chr1:11502678|11502897:+_chr1:11514390|11514526:+_chr1:11515369|11515503:+_chr1:11516001|11516161:+_chr1:11517463|11517602:+_chr1:11519355|11519503:+_chr1:11519719|11519880:+_chr1:11520687|11520848:+_chr1:11523366|11523442:+_chr1:11523942|11524055:+_chr1:11525176|11525312:+_chr1:11526651|11526835:+_chr1:11526976|11527089:+_chr1:11529556|11529686:+_chr1:11529787|11531033:+_chr1:11531565|11531710:+_chr1:11534381|11534540:+_chr1:11535011|11535124:+_chr1:11535478|11535644:+_chr1:11536324|11537225:+","UN_DISP3_LS0028","DISP3","protein coding gene","no",1.32,0,0,0.005,45,0,0,"0(0)","LGG","no","TE_intersect_:11526944|chr1|11526944|11527234|AluSx:Alu:SINE|117|-","NA","intron_intersect_chr1:11526835|11529556","exon_intersect_chr1:11529556|11529686"]
["chr1:11529686|11529767:+","chr1:11500976|11502088:+_chr1:11502678|11502897:+_chr1:11514390|11514526:+_chr1:11515369|11515503:+_chr1:11516001|11516161:+_chr1:11517463|11517602:+_chr1:11519355|11519503:+_chr1:11519719|11519880:+_chr1:11520687|11520848:+_chr1:11523366|11523442:+_chr1:11523942|11524055:+_chr1:11525176|11525312:+_chr1:11526651|11526835:+_chr1:11529556|11529686:+_chr1:11529767|11529959:+_chr1:11530912|11531033:+_chr1:11531565|11531710:+_chr1:11534381|11534540:+_chr1:11535011|11535124:+_chr1:11535478|11535644:+_chr1:11536324|11537584:+","UN_DISP3_LS0030","DISP3","protein coding gene","no",2.79,0,0,0.008,80,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:11529686|11529787","intron_intersect_chr1:11529686|11529787"]
["chr1:11529959|11530912:+","chr1:11500976|11502088:+_chr1:11502678|11502897:+_chr1:11514390|11514526:+_chr1:11515369|11515503:+_chr1:11516001|11516161:+_chr1:11517463|11517602:+_chr1:11519355|11519503:+_chr1:11519719|11519880:+_chr1:11520687|11520848:+_chr1:11523366|11523442:+_chr1:11523942|11524055:+_chr1:11525176|11525312:+_chr1:11526651|11526835:+_chr1:11529556|11529686:+_chr1:11529767|11529959:+_chr1:11530912|11531033:+_chr1:11531565|11531710:+_chr1:11534381|11534540:+_chr1:11535011|11535124:+_chr1:11535478|11535644:+_chr1:11536324|11537584:+","UN_DISP3_LS0031","DISP3","protein coding gene","no",3.31,0,0,0.027,255,0,0,"0(0)","GBM;LGG;PCPG","no","NA","NA","intron_intersect_chr1:11529959|11530907","exon_intersect_chr1:11530907|11531033"]
["chr1:115505760|115532794:+","chr1:115505552|115505760:+_chr1:115532794|115532890:+_chr1:115534702|115534926:+","UN_ELOCP20_UP_LS0002","ELOCP20","pseudogene","no",3.56,0,0,0.011,107,0,0,"0(0)","THCA","no","NA","TE_intersect_:115532775|chr1|115532775|115533026|L3:CR1:LINE|350|-","NA","NA"]
["chr1:115505760|115533668:+","chr1:115505552|115505760:+_chr1:115533668|115533903:+_chr1:115534702|115534919:+","UN_ELOCP20_UP_LS0003","ELOCP20","pseudogene","no",2.29,0,0,0.005,48,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr1:115505760|115537107:+","chr1:115505552|115505760:+_chr1:115537107|115537171:+_chr1:115541131|115541185:+_chr1:115541397|115541702:+_chr1:115555563|115556571:+","UN_ELOCP20_UP_LS0006","ELOCP20","pseudogene","no",2.14,0,0,0.006,57,0,0,"0(0)","THCA","no","NA","TE_intersect_:115536537|chr1|115536537|115537219|MER50B:ERV1:LTR|163|+","NA","NA"]
["chr1:115505760|115555563:+","chr1:115505466|115505760:+_chr1:115555563|115556496:+","UN_ELOCP20_UP_LS0009","ELOCP20","pseudogene","no",3.23,0,0,0.012,119,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr1:115532890|115533668:+","chr1:115505552|115505760:+_chr1:115532794|115532890:+_chr1:115533668|115533931:+_chr1:115534702|115534926:+","UN_ELOCP20_UP_LS0016","ELOCP20","pseudogene","no",3.6,0,0,0.004,36,0,0,"0(0)","THCA","no","TE_intersect_:115532775|chr1|115532775|115533026|L3:CR1:LINE|350|-","NA","NA","NA"]
["chr1:115533931|115534702:+","chr1:115505510|115505760:+_chr1:115532794|115532890:+_chr1:115533715|115533931:+_chr1:115534702|115534984:+","UN_ELOCP20_UP_LS0021","ELOCP20","pseudogene","no",5.44,0,0,0.019,186,0,0,"0(0)","THCA","no","TE_intersect_:115533718|chr1|115533718|115534367|PABL_B:ERV1:LTR|92|-","TE_intersect_:115534523|chr1|115534523|115535306|LTR1E:ERV1:LTR|175|+","NA","NA"]
["chr1:115537171|115541131:+","chr1:115505552|115505760:+_chr1:115537107|115537171:+_chr1:115541131|115541185:+_chr1:115541397|115541702:+_chr1:115555563|115556571:+","UN_ELOCP20_UP_LS0022","ELOCP20","pseudogene","no",2.31,0,0,0.01,99,0,0,"0(0)","THCA","no","TE_intersect_:115536537|chr1|115536537|115537219|MER50B:ERV1:LTR|163|+","NA","NA","NA"]
["chr1:115539852|115541131:+","chr1:115539474|115539852:+_chr1:115541131|115541185:+_chr1:115541397|115541702:+_chr1:115543012|115544770:+","UN_ELOCP20_UP_LS0025","ELOCP20","pseudogene","no",3.54,0,0,0.014,133,0,0,"0(0)","ESCA;HNSC;SARC","no","NA","NA","NA","NA"]
["chr1:115541702|115555563:+","chr1:115505553|115505760:+_chr1:115541131|115541185:+_chr1:115541397|115541702:+_chr1:115555563|115557186:+","UN_ELOCP20_UP_LS0029","ELOCP20","pseudogene","no",3.69,0,0,0.041,391,0,0,"0(0)","THCA;UCS","no","TE_intersect_:115541665|chr1|115541665|115541813|MIRb:MIR:SINE|285|-","TE_intersect_:115555483|chr1|115555483|115555836|MLT1H2:ERVL-MaLR:LTR|252|-","NA","NA"]
["chr1:115545702|115555563:+","chr1:115545232|115545702:+_chr1:115555563|115556517:+","UN_ELOCP20_UP_LS0032","ELOCP20","pseudogene","no",1.53,0,0,0.009,82,0,0,"0(0)","THCA","no","NA","TE_intersect_:115555483|chr1|115555483|115555836|MLT1H2:ERVL-MaLR:LTR|252|-","NA","NA"]
["chr1:115614895|115651277:+","chr1:115505358|115505760:+_chr1:115614779|115614895:+_chr1:115651277|115651484:+_chr1:115659641|115659773:+_chr1:115663661|115664268:+_chr1:115682364|115682497:+_chr1:115683944|115684076:+_chr1:115685293|115685527:+_chr1:115691119|115698221:+","UN_AL357137.1_UP_LS0001","AL357137.1","pseudogene","no",4.9,0,0,0.008,73,0,0,"0(0)","THCA","no","TE_intersect_:115614766|chr1|115614766|115615028|AluJb:Alu:SINE|157|-","NA","NA","exon_intersect_chr1:115651277|115651484"]
["chr1:115671147|115682364:+","chr1:115671116|115671147:+_chr1:115682364|115682497:+_chr1:115683944|115684076:+_chr1:115685293|115685527:+_chr1:115691119|115695435:+","UN_VANGL1_LS0020","VANGL1","protein coding gene","no",2.21,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr1:115671045|115671337","exon_intersect_chr1:115682364|115682497"]
["chr1:115744912|115757484:-","chr1:115699488|115701426:-_chr1:115702921|115702995:-_chr1:115705192|115705292:-_chr1:115717840|115717894:-_chr1:115725508|115725553:-_chr1:115726992|115727122:-_chr1:115732901|115732974:-_chr1:115738224|115738335:-_chr1:115740728|115740828:-_chr1:115744828|115744912:-_chr1:115757484|115757651:-","UN_CASQ2_LS0006","CASQ2","protein coding gene","no",2.24,0,0,0.004,41,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:115744912|115768308","intron_intersect_chr1:115744912|115768308"]
["chr1:116037388|116066520:+","chr1:116032677|116035327:+_chr1:116037303|116037388:+_chr1:116066520|116066708:+_chr1:116067019|116070054:+","UN_SLC22A15_LS0033","SLC22A15","protein coding gene","no",3.15,0,0,0.002,23,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:116037303|116037527","exon_intersect_chr1:116066520|116066708"]
["chr1:116112209|116112407:+","chr1:116111947|116112209:+_chr1:116112407|116112663:+_chr1:116120932|116121072:+_chr1:116124066|116124357:+_chr1:116127466|116127644:+_chr1:116128145|116128339:+_chr1:116133132|116136956:+","UN_MAB21L3_LS0006","MAB21L3","protein coding gene","no",1.24,0,0,0.003,31,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:116111810|116112407","exon_intersect_chr1:116112407|116112663"]
["chr1:116393723|116396598:+","chr1:116388727|116388772:+_chr1:116388902|116389019:+_chr1:116389439|116389707:+_chr1:116390213|116390411:+_chr1:116390782|116390891:+_chr1:116392854|116392988:+_chr1:116393531|116393723:+_chr1:116396598|116396734:+_chr1:116397888|116398038:+_chr1:116398621|116398789:+_chr1:116398930|116399084:+_chr1:116399420|116399543:+_chr1:116400861|116401006:+_chr1:116401130|116401260:+_chr1:116401554|116401655:+_chr1:116403884|116403975:+_chr1:116404416|116404772:+","UN_ATP1A1_LS0088","ATP1A1","protein coding gene","no",55.42,0,0,0.003,33,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:116393723|116395110","exon_intersect_chr1:116396598|116396734"]
["chr1:116428494|116433086:-","chr1:116423800|116423915:-_chr1:116428382|116428494:-_chr1:116433086|116433368:-","UN_LINC01762_LS0004","LINC01762","lncRNA gene","no",3.08,0,0,0.004,38,0,0,"0(0)","SKCM","no","TE_intersect_:116432959|chr1|116432959|116433171|MIRb:MIR:SINE|273|-","NA","exon_intersect_chr1:116433086|116433368","intron_intersect_chr1:116428494|116429049"]
["chr1:116504421|116504980:-","chr1:116504371|116504421:-_chr1:116504980|116505139:-_chr1:116514617|116514822:-_chr1:116519231|116519267:-_chr1:116521906|116521983:-_chr1:116535965|116536228:-_chr1:116544311|116544604:-_chr1:116570903|116570984:-","UN_AL390066.1_UP_LS0001","AL390066.1","lncRNA gene","no",2.22,0,0,0.006,57,0,0,"0(0)","LAML","no","TE_intersect_:116504849|chr1|116504849|116505053|MIRb:MIR:SINE|242|+","TE_intersect_:116504246|chr1|116504246|116504444|MIRb:MIR:SINE|253|+","NA","NA"]
["chr1:116504510|116504980:-","chr1:116504043|116504510:-_chr1:116504980|116505139:-_chr1:116514617|116514822:-_chr1:116519231|116519267:-_chr1:116521906|116521983:-_chr1:116535965|116536228:-_chr1:116544311|116544590:-","UN_AL390066.1_UP_LS0002","AL390066.1","lncRNA gene","no",4.05,0,0,0.005,52,0,0,"0(0)","LAML","no","TE_intersect_:116504849|chr1|116504849|116505053|MIRb:MIR:SINE|242|+","NA","NA","NA"]
["chr1:116505139|116514617:-","chr1:116504371|116504421:-_chr1:116504980|116505139:-_chr1:116514617|116514822:-_chr1:116519231|116519267:-_chr1:116521906|116521983:-_chr1:116535965|116536228:-_chr1:116544311|116544604:-_chr1:116570903|116570984:-","UN_AL390066.1_UP_LS0003","AL390066.1","lncRNA gene","no",2.79,0,0,0.003,28,0,0,"0(0)","LAML","no","NA","TE_intersect_:116505054|chr1|116505054|116505162|FLAM_C:Alu:SINE|139|+","exon_intersect_chr1:116514535|116514822","NA"]
["chr1:116608331|116608765:-","chr1:116574409|116577562:-_chr1:116579392|116579877:-_chr1:116584645|116585052:-_chr1:116588694|116589104:-_chr1:116599941|116600345:-_chr1:116603624|116604025:-_chr1:116607942|116608331:-_chr1:116608765|116608947:-","UN_IGSF3_LS0020","IGSF3","protein coding gene","no",1.45,0,0,0.001,12,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:116608331|116613765","intron_intersect_chr1:116608331|116613765"]
["chr1:11661414|11661924:-","chr1:11661174|11661414:-_chr1:11661924|11662056:-","UN_FBXO44_LS0019","FBXO44","protein coding gene","no",0.99,0,0,0.002,20,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:11661130|11663327","exon_intersect_chr1:11661130|11663327"]
["chr1:116616457|116627051:-","chr1:116574409|116577562:-_chr1:116579392|116579877:-_chr1:116584645|116585052:-_chr1:116588694|116589104:-_chr1:116599941|116600345:-_chr1:116603624|116604025:-_chr1:116606492|116606551:-_chr1:116607942|116608331:-_chr1:116613765|116614175:-_chr1:116616080|116616457:-_chr1:116627051|116627236:-","UN_IGSF3_LS0029","IGSF3","protein coding gene","no",2.65,0,0,0.004,36,0,0,"0(0)","THCA","no","NA","NA","intron_intersect_chr1:116616457|116646872","intron_intersect_chr1:116616457|116646872"]
["chr1:116666956|116678583:-","chr1:116574409|116577562:-_chr1:116579392|116579877:-_chr1:116584645|116585052:-_chr1:116588694|116589104:-_chr1:116599941|116600345:-_chr1:116603624|116604025:-_chr1:116606492|116606551:-_chr1:116607942|116608331:-_chr1:116613765|116614175:-_chr1:116616080|116616457:-_chr1:116666284|116666956:-_chr1:116678583|116679090:-","UN_CD58_UP_LS0002","CD58","protein coding gene","no",2.84,0,0,0.005,47,0,0,"0(0)","SKCM;UVM","no","NA","NA","NA","intron_intersect_chr1:116666956|116667618"]
["chr1:11674566|11674614:+","chr1:11674483|11674566:+_chr1:11674614|11674777:+","UN_MAD2L2_LS0001","MAD2L2","protein coding gene","no",8.92,0,0,0.003,29,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr1:11674480|11674816","exon_intersect_chr1:11674480|11674816"]
["chr1:116910132|116910559:-","chr1:116909149|116910132:-_chr1:116910559|116912311:-","UN_PTGFRN_LS0001","PTGFRN","protein coding gene","no",1.23,0,0,0.004,36,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:116910252|116941715","exon_intersect_chr1:116910057|116910252"]
["chr1:11704924|11706249:+","chr1:11691752|11691853:+_chr1:11704798|11704924:+_chr1:11706249|11706709:+_chr1:11709275|11709465:+_chr1:11711851|11711965:+_chr1:11712340|11712429:+_chr1:11715119|11715208:+_chr1:11719584|11725857:+","UN_DRAXIN_LS0002","DRAXIN","protein coding gene","no",1.1,0,0,0.003,27,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:11691853|11706249","exon_intersect_chr1:11706249|11706709"]
["chr1:117050334|117056927:-","chr1:117025520|117026786:-_chr1:117050167|117050334:-_chr1:117056927|117057044:-_chr1:117059373|117059487:-","UN_AL445231.1_LS0007","AL445231.1","lncRNA gene","no",1.84,0,0,0.004,36,0,0,"0(0)","OV","no","TE_intersect_:117056751|chr1|117056751|117057078|AluJo:Alu:SINE|190|+","TE_intersect_:117050215|chr1|117050215|117050365|Plat_L3:CR1:LINE|327|+","intron_intersect_chr1:117050334|117059373","intron_intersect_chr1:117050334|117059373"]
["chr1:117057044|117059373:-","chr1:117025520|117026786:-_chr1:117050167|117050334:-_chr1:117056927|117057044:-_chr1:117059373|117059487:-","UN_AL445231.1_LS0010","AL445231.1","lncRNA gene","no",1.76,0,0,0.005,46,0,0,"0(0)","OV","no","NA","TE_intersect_:117056751|chr1|117056751|117057078|AluJo:Alu:SINE|190|+","exon_intersect_chr1:117059373|117059490","intron_intersect_chr1:117050334|117059373"]
["chr1:117143883|117147613:-","chr1:117143588|117143883:-_chr1:117147613|117147782:-_chr1:117153091|117153369:-_chr1:117156574|117156921:-_chr1:117170107|117170171:-_chr1:117210824|117210934:-","UN_VTCN1_LS0004","VTCN1","protein coding gene","no",7.9,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:117147613|117147782","exon_intersect_chr1:117143587|117145225"]
["chr1:117144697|117147657:-","chr1:117143588|117144697:-_chr1:117147657|117147782:-_chr1:117153091|117153369:-_chr1:117170107|117170171:-_chr1:117210824|117210927:-","UN_VTCN1_LS0014","VTCN1","protein coding gene","no",22.82,0,0,0.002,23,0,0,"0(0)","OV","no","NA","TE_intersect_:117144688|chr1|117144688|117144786|AmnSINE1:5S-Deu-L2:SINE|287|-","exon_intersect_chr1:117147613|117147782","exon_intersect_chr1:117143587|117145225"]
["chr1:117170171|117213097:-","chr1:117156645|117156921:-_chr1:117170107|117170171:-_chr1:117213097|117213175:-_chr1:117225107|117225256:-","UN_TRIM45_UP_LS0001","TRIM45","protein coding gene","no",8.76,0,0,0.004,43,0,0,"0(0)","BRCA","no","NA","NA","NA","intron_intersect_chr1:117170171|117173187"]
["chr1:117211618|117211749:+","chr1:117211230|117211618:+_chr1:117211749|117212092:+","UN_LINC01525_UP_LS0005","LINC01525","lncRNA gene","no",2.63,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:117213175|117225107:-","chr1:117156645|117156921:-_chr1:117170107|117170171:-_chr1:117213097|117213175:-_chr1:117225107|117225256:-","UN_VTCN1_UP_LS0001","VTCN1","protein coding gene","no",11.54,0,0,0.004,34,0,0,"0(0)","BRCA","no","NA","NA","NA","NA"]
["chr1:11725826|11726388:-","chr1:11725718|11725826:-_chr1:11726388|11726544:-_chr1:11731730|11731850:-","UN_MAD2L2_UP_LS0002","MAD2L2","protein coding gene","no",2.65,0,0,0.013,127,0,0,"0(0)","GBM;OV;THYM","no","TE_intersect_:11726088|chr1|11726088|11726393|AluSz:Alu:SINE|98|-","NA","NA","exon_intersect_chr1:11719584|11725857"]
["chr1:117272284|117321124:+","chr1:117272200|117272284:+_chr1:117321124|117321336:+","UN_MAN1A2_UP_LS0002","MAN1A2","protein coding gene","no",2.58,0,0,0.004,42,0,0,"0(0)","OV","no","TE_intersect_:117271704|chr1|117271704|117272359|LTR51:ERV1:LTR|162|-","TE_intersect_:117320801|chr1|117320801|117321483|MER39:ERV1:LTR|132|+","NA","exon_intersect_chr1:117321124|117321336"]
["chr1:11748563|11750108:-","chr1:11748414|11748563:-_chr1:11750108|11750215:-_chr1:11750338|11750474:-","UN_AGTRAP_LS0013","AGTRAP","protein coding gene","no",2.04,0,0,0.002,18,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:11750077|11750771","exon_intersect_chr1:11748415|11748610"]
["chr1:11750107|11750227:-","chr1:11749983|11750107:-_chr1:11750227|11750394:-_chr1:11750544|11750676:-","UN_AGTRAP_LS0019","AGTRAP","protein coding gene","no",1.58,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:11750077|11750771","exon_intersect_chr1:11750077|11750771"]
["chr1:11750146|11750227:-","chr1:11750076|11750146:-_chr1:11750227|11750459:-","UN_AGTRAP_LS0022","AGTRAP","protein coding gene","no",3.26,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:11750077|11750771","exon_intersect_chr1:11750077|11750771"]
["chr1:118277759|118279768:-","chr1:118276141|118277759:-_chr1:118279768|118279831:-_chr1:118281142|118281504:-","UN_RNA5SP56_UP_LS0001","RNA5SP56","no","no",2.27,0,0,0.007,65,0,0,"0(0)","OV","no","NA","TE_intersect_:118277523|chr1|118277523|118277815|LTR78:ERV1:LTR|282|-","NA","NA"]
["chr1:118279831|118281142:-","chr1:118276141|118277759:-_chr1:118279768|118279831:-_chr1:118281142|118281504:-","UN_RNA5SP56_UP_LS0004","RNA5SP56","no","no",1.75,0,0,0.009,83,0,0,"0(0)","OV","no","TE_intersect_:118280887|chr1|118280887|118286905|L1PA2:L1:LINE|25|+","NA","NA","NA"]
["chr1:118450720|118451759:-","chr1:118450347|118450720:-_chr1:118451759|118451836:-_chr1:118453862|118454010:-","UN_RNA5SP56_UP_LS0007","RNA5SP56","no","no",6.75,0,0,0.006,54,0,0,"0(0)","OV;UCS","no","TE_intersect_:118451519|chr1|118451519|118451893|L1ME3Cz:L1:LINE|268|+","TE_intersect_:118450715|chr1|118450715|118450979|L1MEg:L1:LINE|213|+","NA","NA"]
["chr1:118451836|118453862:-","chr1:118450347|118450720:-_chr1:118451759|118451836:-_chr1:118453862|118454010:-","UN_RNA5SP56_UP_LS0010","RNA5SP56","no","no",4.5,0,0,0.004,40,0,0,"0(0)","OV;UCS","no","TE_intersect_:118453785|chr1|118453785|118454146|THE1B:ERVL-MaLR:LTR|136|-","TE_intersect_:118451519|chr1|118451519|118451893|L1ME3Cz:L1:LINE|268|+","NA","NA"]
["chr1:11847630|11848012:-","chr1:11845879|11846014:-_chr1:11847113|11847439:-_chr1:11847562|11847630:-_chr1:11848012|11848345:-","UN_CLCN6_LS0058","CLCN6","protein coding gene","no",5,0,0,0.005,51,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:11847434|11848079","exon_intersect_chr1:11847562|11847783"]
["chr1:118852448|118859078:+","chr1:118852360|118852448:+_chr1:118859078|118859135:+_chr1:118859461|118859815:+","UN_WARS2-IT1_UP_LS0003","WARS2-IT1","lncRNA gene","no",3.17,0,0,0.024,233,0,0,"0(0)","ESCA;LUAD;LUSC;OV;STAD","no","TE_intersect_:118852351|chr1|118852351|118858380|L1HS:L1:LINE|5|+","NA","NA","NA"]
["chr1:118931832|119001269:-","chr1:118883047|118885516:-_chr1:118899028|118899125:-_chr1:118914115|118914179:-_chr1:118923436|118923603:-_chr1:118924646|118924817:-_chr1:118926510|118926611:-_chr1:118931619|118931832:-_chr1:119001269|119001392:-","UN_PSMC1P12_UP_LS0003","PSMC1P12","pseudogene","no",1.85,0,0,0.024,227,0,0,"0(0)","GBM;KIRP;LUAD","no","NA","NA","exon_intersect_chr1:119001269|119001405","intron_intersect_chr1:118931832|118987591"]
["chr1:118994031|119001269:-","chr1:118993640|118994031:-_chr1:119001269|119001392:-","UN_TBX15_UP_LS0001","TBX15","protein coding gene","no",2.62,0,0,0.009,90,0,0,"0(0)","LUAD;SARC","no","NA","NA","exon_intersect_chr1:119001269|119001405","NA"]
["chr1:119076607|119080005:-","chr1:119031094|119033359:-_chr1:119034095|119034213:-_chr1:119042264|119042349:-_chr1:119045582|119045662:-_chr1:119076350|119076607:-_chr1:119080005|119080056:-","UN_WARS2_LS0022","WARS2","protein coding gene","no",4.2,0,0,0.002,16,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr1:119076607|119082340","intron_intersect_chr1:119076607|119082340"]
["chr1:11919783|11919884:+","chr1:11919732|11919783:+_chr1:11919884|11920092:+","UN_KIAA2013_LS0001","KIAA2013","protein coding gene","no",1.82,0,0,0.002,19,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:11919591|11920332","exon_intersect_chr1:11919591|11920332"]
["chr1:11923121|11923230:+","chr1:11919784|11919829:+_chr1:11922697|11922806:+_chr1:11922843|11923121:+_chr1:11923230|11923440:+","UN_KIAA2013_LS0085","KIAA2013","protein coding gene","no",1.49,0,0,0.002,22,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:11922175|11923489","exon_intersect_chr1:11922175|11923489"]
["chr1:119295123|119299098:+","chr1:119294952|119295123:+_chr1:119299098|119299411:+","UN_AL359915.1_LS0006","AL359915.1","lncRNA gene","no",4.93,0,0,0.006,61,0,0,"0(0)","ACC","no","NA","TE_intersect_:119299008|chr1|119299008|119299452|MLT1G1:ERVL-MaLR:LTR|278|+","intron_intersect_chr1:119294167|119326963","intron_intersect_chr1:119294167|119326963"]
["chr1:119295123|119299145:+","chr1:119295004|119295123:+_chr1:119299145|119299424:+","UN_AL359915.1_LS0007","AL359915.1","lncRNA gene","no",10.08,0.11,0,0.036,341,0.001,1,"0(0)","ACC","no","NA","TE_intersect_:119299008|chr1|119299008|119299452|MLT1G1:ERVL-MaLR:LTR|278|+","intron_intersect_chr1:119294167|119326963","intron_intersect_chr1:119294167|119326963"]
["chr1:119471483|119571252:+","chr1:119471302|119471483:+_chr1:119571252|119572479:+","UN_HSD3BP5_UP_LS0001","HSD3BP5","pseudogene","no",2.21,0.02,0,0.003,24,0.001,1,"0(0)","MESO","no","TE_intersect_:119471399|chr1|119471399|119471561|MIRb:MIR:SINE|266|-","NA","intron_intersect_chr1:119471259|119473003","intron_intersect_chr1:119568053|119571256"]
["chr1:119527335|119527868:-","chr1:119527084|119527335:-_chr1:119527868|119527992:-_chr1:119623641|119624116:-_chr1:119625875|119626137:-_chr1:119648071|119648129:-","UN_GAPDHP58_UP_LS0002","GAPDHP58","pseudogene","no",2.19,0,0,0.005,48,0,0,"0(0)","MESO;SKCM","no","TE_intersect_:119527817|chr1|119527817|119528200|MLT1A1:ERVL-MaLR:LTR|282|-","NA","NA","NA"]
["chr1:119532180|119532208:-","chr1:119485029|119485608:-_chr1:119489988|119490112:-_chr1:119525856|119527335:-_chr1:119527868|119532180:-_chr1:119532208|119536321:-","UN_GAPDHP58_UP_LS0005","GAPDHP58","pseudogene","no",3.77,0,0,0.001,14,0,0,"0(0)","MESO","no","NA","NA","NA","NA"]
["chr1:119568053|119571252:+","chr1:119564066|119564210:+_chr1:119567891|119568053:+_chr1:119571252|119572067:+","UN_HSD3BP4_LS0001","HSD3BP4","pseudogene","no",4.5,0,0,0.004,35,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:119568053|119571256","intron_intersect_chr1:119568053|119571256"]
["chr1:119568275|119571252:+","chr1:119564066|119564210:+_chr1:119567891|119568275:+_chr1:119571252|119572477:+","UN_HSD3BP4_LS0002","HSD3BP4","pseudogene","no",12.16,0.55,0,0.007,63,0.004,3,"0(0)","MESO","no","TE_intersect_:119568192|chr1|119568192|119568337|MIRb:MIR:SINE|294|-","NA","intron_intersect_chr1:119568053|119571256","intron_intersect_chr1:119568053|119571256"]
["chr1:119727660|119730070:-","chr1:119727426|119727660:-_chr1:119730070|119730164:-_chr1:119732778|119732963:-","UN_PHGDH_LS0017","PHGDH","protein coding gene","no",3.01,0,0,0.003,29,0,0,"0(0)","SKCM;UVM","no","NA","TE_intersect_:119727548|chr1|119727548|119727857|AluY:Alu:SINE|62|+","exon_intersect_chr1:119729940|119730071","intron_intersect_chr1:119727102|119729509"]
["chr1:119727660|119732778:-","chr1:119727421|119727660:-_chr1:119732778|119732910:-","UN_PHGDH_LS0018","PHGDH","protein coding gene","no",3.19,0,0,0.012,117,0,0,"0(0)","SKCM;UVM","no","NA","TE_intersect_:119727548|chr1|119727548|119727857|AluY:Alu:SINE|62|+","intron_intersect_chr1:119730071|119734304","intron_intersect_chr1:119727102|119729509"]
["chr1:119727663|119730070:-","chr1:119727428|119727663:-_chr1:119730070|119730164:-_chr1:119732778|119732887:-","UN_PHGDH_LS0019","PHGDH","protein coding gene","no",4.25,0,0,0.018,175,0,0,"0(0)","SKCM;UVM","no","NA","TE_intersect_:119727548|chr1|119727548|119727857|AluY:Alu:SINE|62|+","exon_intersect_chr1:119729940|119730071","intron_intersect_chr1:119727102|119729509"]
["chr1:119730164|119732778:-","chr1:119727428|119727663:-_chr1:119730070|119730164:-_chr1:119732778|119732887:-","UN_PHGDH_LS0021","PHGDH","protein coding gene","no",4.5,0,0,0.018,175,0,0,"0(0)","SKCM;UVM","no","NA","NA","intron_intersect_chr1:119730071|119734304","intron_intersect_chr1:119730071|119734304"]
["chr1:119737266|119742807:+","chr1:119711906|119712160:+_chr1:119721170|119721321:+_chr1:119723376|119723441:+_chr1:119726851|119726905:+_chr1:119727004|119727102:+_chr1:119734634|119734766:+_chr1:119735295|119735443:+_chr1:119737114|119737266:+_chr1:119742807|119743044:+_chr1:119743886|119744213:+","PHGDH_LS020","PHGDH","protein coding gene","no",5.21,0,0,0.003,27,0,0,"0(0)","ESCA","yes","NA","NA","intron_intersect_chr1:119737266|119739462","exon_intersect_chr1:119742807|119743044"]
["chr1:119741819|119742861:-","chr1:119740863|119741819:-_chr1:119742861|119743032:-_chr1:119743985|119744215:-","UN_PHGDH_LS0039","PHGDH","protein coding gene","no",4.53,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:119742807|119743044","exon_intersect_chr1:119741767|119741897"]
["chr1:119743012|119744143:-","chr1:119741766|119741891:-_chr1:119742869|119743012:-_chr1:119744143|119744215:-","UN_PHGDH_LS0058","PHGDH","protein coding gene","no",4.28,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:119743886|119744215","exon_intersect_chr1:119742807|119743044"]
["chr1:119799862|119799957:-","chr1:119794087|119794685:-_chr1:119798497|119798602:-_chr1:119799725|119799862:-_chr1:119799957|119800034:-","UN_REG4_LS0026","REG4","protein coding gene","no",2.12,0,0,0.001,12,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:119799862|119801172","intron_intersect_chr1:119799862|119801172"]
["chr1:119844767|119862010:-","chr1:119844657|119844767:-_chr1:119862010|119862159:-","UN_NBPF7_UP_LS0001","NBPF7","pseudogene","no",2.39,0,0,0.003,24,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr1:120070011|120076268:+","chr1:120069657|120070011:+_chr1:120076268|120077089:+","UN_AC245008.1_UP_LS0001","AC245008.1","lncRNA gene","no",1.18,0,0,0.006,62,0,0,"0(0)","GBM;OV","no","NA","NA","NA","NA"]
["chr1:120341500|120341587:+","chr1:120341452|120341500:+_chr1:120341587|120341794:+","UN_AC244669.1_LS0019","AC244669.1","pseudogene","no",2.91,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:120341348|120341506","intron_intersect_chr1:120341506|120341717"]
["chr1:120393634|120396319:+","chr1:120393543|120393634:+_chr1:120396319|120396479:+_chr1:120397302|120397358:+_chr1:120397617|120397914:+","UN_NBPF8_UP_LS0001","NBPF8","pseudogene","no",2.87,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:120396479|120397302:+","chr1:120393543|120393634:+_chr1:120396319|120396479:+_chr1:120397302|120397358:+_chr1:120397617|120397914:+","UN_NBPF8_UP_LS0004","NBPF8","pseudogene","no",3.37,0,0,0.004,43,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:120397358|120397617:+","chr1:120393543|120393634:+_chr1:120396319|120396479:+_chr1:120397302|120397358:+_chr1:120397617|120397914:+","UN_NBPF8_UP_LS0005","NBPF8","pseudogene","no",2.65,0,0,0.004,39,0,0,"0(0)","OV","no","NA","TE_intersect_:120397576|chr1|120397576|120397871|AluSq2:Alu:SINE|98|-","NA","NA"]
["chr1:1204236|1205370:-","chr1:1203511|1204236:-_chr1:1205370|1205492:-_chr1:1206385|1206571:-","TNFRSF18_LS007","TNFRSF18","protein coding gene","yes",5.6,0,0,0.003,28,0,0,"0(0)","UCS","yes","NA","NA","exon_intersect_chr1:1205370|1205680","intron_intersect_chr1:1204236|1204399"]
["chr1:120425845|120427466:+","chr1:120414546|120415304:+_chr1:120417175|120417292:+_chr1:120417622|120417811:+_chr1:120419850|120420118:+_chr1:120425747|120425845:+_chr1:120427466|120431333:+","UN_NBPF8_UP_LS0042","NBPF8","pseudogene","no",2.32,0.02,0,0.003,26,0.001,1,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr1:120436697|120445829:+","chr1:120434085|120436390:+_chr1:120436488|120436697:+_chr1:120445829|120446043:+_chr1:120447094|120447166:+_chr1:120447630|120447841:+_chr1:120449193|120449402:+_chr1:120451180|120451282:+_chr1:120452117|120452331:+_chr1:120453372|120453444:+_chr1:120453909|120454114:+_chr1:120455409|120455460:+_chr1:120459367|120459530:+_chr1:120460573|120460624:+_chr1:120461254|120461426:+_chr1:120462146|120462197:+_chr1:120462794|120462966:+_chr1:120463676|120463727:+_chr1:120464376|120464548:+_chr1:120465263|120465371:+_chr1:120465978|120467739:+","UN_NBPF8_LS0009","NBPF8","pseudogene","no",1.84,0,0,0.004,40,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:120436697|120438544","exon_intersect_chr1:120445829|120446043"]
["chr1:120505962|120512470:-","chr1:120488863|120489916:-_chr1:120491582|120491628:-_chr1:120491935|120492073:-_chr1:120493158|120493301:-_chr1:120494234|120494460:-_chr1:120495030|120495146:-_chr1:120497182|120497421:-_chr1:120501110|120501234:-_chr1:120501928|120502117:-_chr1:120503600|120503719:-_chr1:120504382|120504513:-_chr1:120505711|120505962:-_chr1:120512470|120512693:-_chr1:120513766|120513817:-_chr1:120514825|120515060:-_chr1:120516824|120517352:-_chr1:120518530|120518649:-_chr1:120519218|120519410:-_chr1:120520234|120520669:-_chr1:120523894|120524126:-_chr1:120530296|120530571:-","UN_AC241952.1_LS0027","AC241952.1","pseudogene","no",1.96,0,0,0.004,37,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:120512470|120512693","intron_intersect_chr1:120505962|120509485"]
["chr1:120637227|120639477:+","chr1:120637154|120637227:+_chr1:120639477|120639584:+_chr1:120642137|120642245:+_chr1:120643746|120644745:+","UN_AC241952.1_LS0084","AC241952.1","pseudogene","no",0.53,0,0,0.002,18,0,0,"0(0)","GBM","no","TE_intersect_:120637107|chr1|120637107|120637808|L1PA7:L1:LINE|71|-","NA","NA","NA"]
["chr1:120639584|120643746:+","chr1:120630469|120630610:+_chr1:120639477|120639584:+_chr1:120643746|120644708:+","UN_AC241952.1_LS0087","AC241952.1","pseudogene","no",1.37,0,0,0.008,75,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr1:12064276|12084464:+","chr1:12063950|12064276:+_chr1:12084464|12084551:+_chr1:12097101|12097217:+_chr1:12104379|12104531:+_chr1:12109566|12109656:+_chr1:12110041|12110204:+_chr1:12111898|12112014:+_chr1:12115577|12115729:+_chr1:12123284|12123377:+_chr1:12123715|12123827:+_chr1:12125951|12126052:+_chr1:12126183|12126236:+_chr1:12135588|12135613:+_chr1:12138229|12138436:+_chr1:12142287|12144205:+","UN_TNFRSF8_LS0003","TNFRSF8","protein coding gene","no",1.71,0,0,0.007,65,0,0,"0(0)","MESO;OV;TGCT","no","NA","NA","intron_intersect_chr1:12063661|12065002","exon_intersect_chr1:12084464|12084551"]
["chr1:120700487|120701057:-","chr1:120696742|120700487:-_chr1:120701057|120701458:-","UN_AC241952.1_LS0098","AC241952.1","pseudogene","no",1.82,0,0,0.006,53,0,0,"0(0)","LGG","no","NA","NA","NA","NA"]
["chr1:120717305|120723565:-","chr1:120716486|120717305:-_chr1:120723565|120723761:-","UN_AC241952.1_UP_LS0001","AC241952.1","pseudogene","no",1.34,0,0,0.008,78,0,0,"0(0)","GBM;OV","no","NA","NA","NA","NA"]
["chr1:120824053|120825594:+","chr1:120813906|120813993:+_chr1:120814829|120815043:+_chr1:120816085|120816157:+_chr1:120816622|120816827:+_chr1:120818123|120818174:+_chr1:120822104|120822267:+_chr1:120823309|120823360:+_chr1:120823974|120824053:+_chr1:120825594|120825686:+_chr1:120826406|120826457:+_chr1:120827054|120827226:+_chr1:120829764|120829815:+_chr1:120830416|120830588:+_chr1:120831298|120831349:+_chr1:120831988|120832160:+_chr1:120832875|120832983:+_chr1:120833603|120833775:+_chr1:120834495|120834546:+_chr1:120837169|120837341:+_chr1:120838051|120838102:+_chr1:120838745|120838917:+_chr1:120839632|120839740:+_chr1:120840350|120840619:+","UN_NBPF26_LS0028","NBPF26","protein coding gene","no",11.92,0,0,0.002,16,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:120823974|120824146","intron_intersect_chr1:120824917|120829764"]
["chr1:120828152|120829971:+","chr1:120813906|120813993:+_chr1:120814829|120815043:+_chr1:120816085|120816157:+_chr1:120816622|120816827:+_chr1:120818123|120818174:+_chr1:120822104|120822267:+_chr1:120823309|120823360:+_chr1:120823974|120824146:+_chr1:120824866|120824917:+_chr1:120825514|120825686:+_chr1:120826406|120826457:+_chr1:120827054|120827226:+_chr1:120827946|120828152:+_chr1:120829971|120830495:+_chr1:120833683|120833775:+_chr1:120834495|120834546:+_chr1:120837169|120837341:+_chr1:120838051|120838102:+_chr1:120838745|120838917:+_chr1:120839632|120839740:+_chr1:120840350|120840619:+","UN_NBPF26_LS0053","NBPF26","protein coding gene","no",1.15,0,0,0.003,25,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:120824917|120829764","intron_intersect_chr1:120829815|120830416"]
["chr1:120912324|120948977:+","chr1:120912154|120912324:+_chr1:120948977|120949038:+_chr1:120952439|120952904:+_chr1:120953223|120953449:+","UN_AC241377.4_UP_LS0002","AC241377.4","pseudogene","no",0.45,0,0,0.002,16,0,0,"0(0)","DLBC","no","NA","TE_intersect_:120948802|chr1|120948802|120949174|MLT1H:ERVL-MaLR:LTR|257|-","NA","intron_intersect_chr1:120942763|120952439"]
["chr1:120913450|120914358:+","chr1:120913379|120913450:+_chr1:120914358|120914412:+_chr1:120952439|120953449:+","UN_LINC00623_LS0001","LINC00623","lncRNA gene","no",2.73,0,0,0.008,79,0,0,"0(0)","ESCA;GBM;OV","no","NA","NA","exon_intersect_chr1:120913151|120914238","intron_intersect_chr1:120914238|120942600"]
["chr1:120913450|121013384:+","chr1:120913379|120913450:+_chr1:121013384|121013764:+","UN_FCGR1B_UP_LS0001","FCGR1B","protein coding gene","no",3.67,0,0,0.004,34,0,0,"0(0)","OV","no","NA","TE_intersect_:121013334|chr1|121013334|121013949|MER49:ERV1:LTR|187|+","exon_intersect_chr1:120913151|120914238","intron_intersect_chr1:121009291|121037562"]
["chr1:120913521|120913667:-","chr1:120911215|120913521:-_chr1:120913667|120914238:-","UN_AC241377.3_LS0004","AC241377.3","lncRNA gene","no",0.39,0.01,0,0.005,49,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:120913151|120914238","exon_intersect_chr1:120913151|120914238"]
["chr1:120969354|120972786:+","chr1:120913379|120913450:+_chr1:120969119|120969354:+_chr1:120972786|120982969:+","AC241377.4_LS002","AC241377.4","pseudogene","no",2.35,0,0,0.005,44,0,0,"0(0)","LAML","yes","NA","NA","intron_intersect_chr1:120953463|120985692","intron_intersect_chr1:120953463|120985692"]
["chr1:121060926|121116866:-","chr1:121059754|121060926:-_chr1:121116866|121117242:-","UN_AC241377.1_UP_LS0001","AC241377.1","pseudogene","no",2.89,0.01,0,0.003,26,0.001,1,"0(0)","ACC","no","NA","NA","exon_intersect_chr1:121116862|121117257","NA"]
["chr1:121098172|121107524:+","chr1:121097656|121098172:+_chr1:121107524|121107565:+_chr1:121146650|121148242:+","UN_AC244453.3_LS0003","AC244453.3","lncRNA gene","no",1.7,0,0,0.004,40,0,0,"0(0)","THCA","no","NA","TE_intersect_:121107084|chr1|121107084|121107705|MLT2B3:ERVL:LTR|187|-","intron_intersect_chr1:121097655|121108210","intron_intersect_chr1:121097655|121108210"]
["chr1:121098172|121146650:+","chr1:121097662|121098172:+_chr1:121146650|121148334:+","UN_SRGAP2C_UP_LS0002","SRGAP2C","protein coding gene","no",3.66,0,0,0.003,31,0,0,"0(0)","THCA","no","NA","NA","intron_intersect_chr1:121097655|121108210","exon_intersect_chr1:121146650|121146826"]
["chr1:121175810|121177208:-","chr1:121175345|121175810:-_chr1:121177208|121177293:-_chr1:121181271|121181348:-_chr1:121183338|121184292:-","UN_FAM72B_LS0001","FAM72B","protein coding gene","no",0.18,0,0,0.002,21,0,0,"0(0)","ESCA","no","NA","TE_intersect_:121174946|chr1|121174946|121176171|Tigger1:TcMar-Tigger:DNA|114|+","exon_intersect_chr1:121177208|121177332","intron_intersect_chr1:121168835|121177208"]
["chr1:1214184|1215484:-","chr1:1211327|1211625:-_chr1:1211704|1211832:-_chr1:1211942|1212138:-_chr1:1212638|1212704:-_chr1:1212992|1213093:-_chr1:1213663|1213785:-_chr1:1213983|1214184:-_chr1:1215484|1215562:-","UN_TNFRSF4_UP_LS0001","TNFRSF4","protein coding gene","no",0.7,0,0,0.006,59,0,0,"0(0)","STAD","no","NA","NA","NA","NA"]
["chr1:121528671|121538164:-","chr1:121527654|121528671:-_chr1:121538164|121538308:-","UN_EMBP1_LS0005","EMBP1","pseudogene","no",1.85,0,0,0.012,115,0,0,"0(0)","ESCA;OV","no","TE_intersect_:121532230|chr1|121532230|121538261|L1HS:L1:LINE|7|-","NA","intron_intersect_chr1:121519459|121538323","intron_intersect_chr1:121519459|121538323"]
["chr1:121538001|121538323:+","chr1:121537919|121538001:+_chr1:121538323|121538420:+_chr1:121539658|121539843:+","UN_EMBP1_LS0008","EMBP1","pseudogene","no",2.94,0,0,0.036,342,0,0,"0(0)","BLCA;ESCA;LUSC;OV;STAD;TGCT;THYM","no","TE_intersect_:121532230|chr1|121532230|121538261|L1HS:L1:LINE|7|-","NA","intron_intersect_chr1:121519459|121538323","exon_intersect_chr1:121538323|121538420"]
["chr1:1217276|1217423:+","chr1:1217076|1217276:+_chr1:1217423|1217644:+","UN_SDF4_LS0007","SDF4","protein coding gene","no",2.18,0,0,0.004,39,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:1216908|1217804","exon_intersect_chr1:1216908|1217804"]
["chr1:12183720|12183786:-","chr1:12167190|12183720:-_chr1:12183786|12190956:-","UN_TNFRSF1B_LS0008","TNFRSF1B","protein coding gene","yes",5.15,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:12167169|12188796","intron_intersect_chr1:12167169|12188796"]
["chr1:1228535|1228783:+","chr1:1228069|1228535:+_chr1:1228783|1238906:+","UN_SDF4_LS0077","SDF4","protein coding gene","no",3.33,0,0,0.005,52,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1228468|1228946","exon_intersect_chr1:1228468|1228946"]
["chr1:1234769|1234866:-","chr1:1234543|1234769:-_chr1:1234866|1234939:-","UN_B3GALT6_LS0028","B3GALT6","protein coding gene","no",2.11,0,0,0.009,89,0,0,"0(0)","OV","no","TE_intersect_:1234760|chr1|1234760|1234867|MIRb:MIR:SINE|291|-","TE_intersect_:1234760|chr1|1234760|1234867|MIRb:MIR:SINE|291|-","exon_intersect_chr1:1232265|1235041","exon_intersect_chr1:1232265|1235041"]
["chr1:1234978|1235074:-","chr1:1234961|1234978:-_chr1:1235074|1235383:-","UN_SDF4_UP_LS0001","SDF4","protein coding gene","no",3.09,0,0,0.009,84,0,0,"0(0)","OV","no","NA","NA","NA","exon_intersect_chr1:1232265|1235041"]
["chr1:1244497|1247168:-","chr1:1242453|1242646:-_chr1:1242835|1242913:-_chr1:1243062|1243152:-_chr1:1243444|1243552:-_chr1:1243954|1244105:-_chr1:1244191|1244275:-_chr1:1244381|1244497:-_chr1:1247168|1247261:-","UN_SDF4_UP_LS0007","SDF4","protein coding gene","no",2.48,0,0,0.015,143,0,0,"0(0)","TGCT","no","NA","NA","NA","exon_intersect_chr1:1244381|1244724"]
["chr1:125110705|125110750:-","chr1:125110576|125110705:-_chr1:125110750|125110878:-","UN_LINC01691_UP_LS0007","LINC01691","lncRNA gene","no",1.19,0,0,0.004,36,0,0,"0(0)","ESCA","no","TE_intersect_:125110562|chr1|125110562|125111196|L1HS:L1:LINE|8|-","TE_intersect_:125110562|chr1|125110562|125111196|L1HS:L1:LINE|8|-","NA","NA"]
["chr1:12580666|12600361:-","chr1:12578718|12578956:-_chr1:12579293|12579412:-_chr1:12580523|12580666:-_chr1:12600361|12600506:-","UN_DHRS3_LS0027","DHRS3","protein coding gene","no",12.03,0,0,0.003,26,0,0,"0(0)","ACC;KICH","no","NA","NA","intron_intersect_chr1:12596308|12616560","intron_intersect_chr1:12580666|12595986"]
["chr1:1266240|1267862:-","chr1:1255268|1255487:-_chr1:1256045|1256125:-_chr1:1256992|1257130:-_chr1:1257208|1257310:-_chr1:1263346|1263386:-_chr1:1266098|1266240:-_chr1:1267862|1267992:-_chr1:1273666|1273726:-","UBE2J2_LS025","UBE2J2","protein coding gene","no",1.04,0,0,0.007,63,0.001,1,"0(0)","TGCT","yes","NA","NA","exon_intersect_chr1:1267733|1267992","exon_intersect_chr1:1266098|1266290"]
["chr1:12703965|12713015:-","chr1:12702807|12703965:-_chr1:12713015|12713290:-","UN_AC254633.1_UP_LS0006","AC254633.1","lncRNA gene","no",2.77,0,0,0.002,21,0,0,"0(0)","TGCT","no","TE_intersect_:12708145|chr1|12708145|12713280|HERVIP10F-int:ERV1:LTR|68|-","TE_intersect_:12703943|chr1|12703943|12704434|LTR10F:ERV1:LTR|98|-","NA","NA"]
["chr1:12773816|12774858:+","chr1:12773755|12773816:+_chr1:12774858|12775154:+_chr1:12775543|12776118:+_chr1:12777011|12777906:+","UN_PRAMEF1_UP_LS0001","PRAMEF1","protein coding gene","no",4.9,0,0,0.003,28,0,0,"0(0)","TGCT","no","NA","NA","NA","exon_intersect_chr1:12774841|12775154"]
["chr1:1279389|1280437:-","chr1:1279220|1279389:-_chr1:1280437|1280577:-","UN_UBE2J2_UP_LS0002","UBE2J2","protein coding gene","no",1.9,0,0,0.003,29,0,0,"0(0)","LAML","no","TE_intersect_:1280182|chr1|1280182|1280482|AluYe5:Alu:SINE|53|+","TE_intersect_:1279193|chr1|1279193|1279400|MER4B-int:ERV1:LTR|159|-","exon_intersect_chr1:1280436|1281610","exon_intersect_chr1:1279068|1279393"]
["chr1:12939236|12940984:-","chr1:12938797|12939236:-_chr1:12940984|12941354:-","PRAMEF6_LS001","PRAMEF6","protein coding gene","no",2.47,0,0,0.008,73,0,0,"0(0)","TGCT","yes","NA","NA","exon_intersect_chr1:12940984|12941565","intron_intersect_chr1:12939236|12940984"]
["chr1:12942540|12947517:-","chr1:12938472|12939236:-_chr1:12940984|12941565:-_chr1:12942232|12942540:-_chr1:12947517|12947580:-","PRAMEF6_LS004","PRAMEF6","protein coding gene","no",0.66,0,0,0.005,52,0,0,"0(0)","TGCT","yes","NA","NA","exon_intersect_chr1:12947517|12947580","intron_intersect_chr1:12942540|12945353"]
["chr1:13050369|13052118:-","chr1:13049476|13050369:-_chr1:13052118|13052699:-_chr1:13053367|13053675:-_chr1:13056414|13056491:-","PRAMEF27_LS001","PRAMEF27","protein coding gene","no",1.44,0,0,0.009,89,0,0,"0(0)","LIHC","yes","NA","NA","exon_intersect_chr1:13052118|13052699","intron_intersect_chr1:13050369|13052118"]
["chr1:13053675|13155884:-","chr1:13049626|13050369:-_chr1:13052118|13052699:-_chr1:13053367|13053675:-_chr1:13155884|13155947:-","UN_PRAMEF6_UP_LS0001","PRAMEF6","protein coding gene","no",0.33,0,0,0.005,44,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:13155884|13155961","intron_intersect_chr1:13053675|13056397"]
["chr1:13073986|13074659:+","chr1:13060799|13060897:+_chr1:13068722|13068754:+_chr1:13073678|13073986:+_chr1:13074659|13075240:+_chr1:13076991|13077886:+","PRAMEF25_LS003","PRAMEF25","protein coding gene","no",0.66,0,0,0.009,90,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chr1:13073986|13074659","exon_intersect_chr1:13074659|13075240"]
["chr1:13075240|13076991:+","chr1:13060799|13060897:+_chr1:13068722|13068754:+_chr1:13073678|13073986:+_chr1:13074659|13075240:+_chr1:13076991|13077886:+","PRAMEF25_LS004","PRAMEF25","protein coding gene","no",1.35,0,0,0.01,94,0,0,"0(0)","LIHC;TGCT","yes","NA","NA","intron_intersect_chr1:13075240|13076991","exon_intersect_chr1:13076991|13077884"]
["chr1:1308566|1312198:+","chr1:1308282|1308566:+_chr1:1312198|1312220:+","UN_CPTP_UP_LS0004","CPTP","protein coding gene","no",14.2,0,0,0.003,30,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:1308018|1308567","intron_intersect_chr1:1312147|1312226"]
["chr1:1312501|1312636:-","chr1:1312080|1312147:-_chr1:1312226|1312368:-_chr1:1312440|1312501:-_chr1:1312636|1312700:-_chr1:1312787|1312949:-_chr1:1313035|1313124:-_chr1:1313509|1313592:-_chr1:1313732|1313765:-","UN_INTS11_LS0033","INTS11","protein coding gene","no",35.16,2.07,0,0.025,241,0.007,5,"0(0)","UCS","no","NA","NA","exon_intersect_chr1:1312226|1313592","exon_intersect_chr1:1312226|1313592"]
["chr1:13149798|13151549:-","chr1:13148903|13149798:-_chr1:13151549|13152130:-_chr1:13152803|13153111:-_chr1:13158038|13158070:-_chr1:13165895|13165961:-","PRAMEF26_LS001","PRAMEF26","protein coding gene","no",0.93,0,0,0.008,80,0,0,"0(0)","LIHC;TGCT","yes","NA","NA","exon_intersect_chr1:13151549|13152130","intron_intersect_chr1:13149798|13151549"]
["chr1:13176822|13178571:+","chr1:13170237|13170380:+_chr1:13172442|13172532:+_chr1:13175265|13175573:+_chr1:13176241|13176822:+_chr1:13178571|13179466:+","PRAMEF9_LS003","PRAMEF9","protein coding gene","no",1.47,0,0,0.01,97,0,0,"0(0)","LIHC;OV;TGCT","yes","NA","NA","intron_intersect_chr1:13176822|13178571","exon_intersect_chr1:13178571|13179464"]
["chr1:13260803|13262550:+","chr1:13259247|13259555:+_chr1:13260222|13260803:+_chr1:13262550|13263314:+","PRAMEF5_LS003","PRAMEF5","protein coding gene","no",0.93,0,0,0.017,163,0,0,"0(0)","LIHC;OV;TGCT;UCS","yes","NA","NA","intron_intersect_chr1:13260803|13262550","exon_intersect_chr1:13262550|13263435"]
["chr1:13328668|13329244:+","chr1:13327676|13328668:+_chr1:13329244|13329312:+","UN_PRAMEF17_UP_LS0008","PRAMEF17","protein coding gene","no",4.69,0,0,0.002,19,0,0,"0(0)","TGCT","no","TE_intersect_:13327612|chr1|13327612|13328921|SVA_E:SVA:Retroposon|54|+","TE_intersect_:13328938|chr1|13328938|13330093|SVA_E:SVA:Retroposon|70|+","NA","NA"]
["chr1:1335833|1335910:+","chr1:1335395|1335567:+_chr1:1335681|1335833:+_chr1:1335910|1336190:+","UN_DVL1_LS0026","DVL1","protein coding gene","no",2.54,0,0,0.004,41,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1335276|1336515","exon_intersect_chr1:1335276|1336515"]
["chr1:1335833|1335984:+","chr1:1335395|1335567:+_chr1:1335681|1335833:+_chr1:1335984|1336190:+","UN_DVL1_LS0028","DVL1","protein coding gene","no",0.93,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1335276|1336515","exon_intersect_chr1:1335276|1336515"]
["chr1:1353385|1353478:+","chr1:1352860|1353159:+_chr1:1353270|1353385:+_chr1:1353478|1353621:+","UN_MXRA8_LS0066","MXRA8","protein coding gene","no",8.49,0,0,0.004,43,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1352689|1353946","exon_intersect_chr1:1352689|1353946"]
["chr1:135351|138203:+","chr1:134939|135351:+_chr1:138203|139699:+","UN_AL627309.4_UP_LS0004","AL627309.4","lncRNA gene","no",3.43,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:135141|135895","NA"]
["chr1:13563426|13570450:+","chr1:13561086|13563426:+_chr1:13570450|13573624:+","UN_PDPN_UP_LS0004","PDPN","protein coding gene","no",6.83,0,0,0.006,56,0,0,"0(0)","TGCT","no","TE_intersect_:13561714|chr1|13561714|13564107|HERVH-int:ERV1:LTR|200|+","TE_intersect_:13568810|chr1|13568810|13572722|HERVIP10FH-int:ERV1:LTR|78|+","NA","NA"]
["chr1:13585714|13590963:+","chr1:13585470|13585714:+_chr1:13590963|13591271:+","UN_PDPN_LS0012","PDPN","protein coding gene","no",3.31,0,0,0.006,54,0,0,"0(0)","DLBC;OV","no","NA","TE_intersect_:13590941|chr1|13590941|13591229|AluSg:Alu:SINE|80|-","intron_intersect_chr1:13585639|13595827","intron_intersect_chr1:13585639|13595827"]
["chr1:136102|137432:+","chr1:135881|136102:+_chr1:137432|137684:+","UN_AL627309.4_UP_LS0008","AL627309.4","lncRNA gene","no",2.49,0,0,0.004,38,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:136221|136709:-","chr1:135141|136221:-_chr1:136709|136756:-_chr1:136953|137001:-_chr1:137099|137147:-_chr1:137245|139696:-","UN_AL627309.6_UP_LS0006","AL627309.6","pseudogene","no",5.51,0,0,0.008,80,0,0,"0(0)","STAD","no","NA","NA","NA","NA"]
["chr1:13658179|13658434:+","chr1:13657371|13658179:+_chr1:13658434|13659574:+","UN_AL359771.1_LS0002","AL359771.1","lncRNA gene","no",3.34,0,0,0.002,18,0,0,"0(0)","ESCA","no","TE_intersect_:13657370|chr1|13657370|13659077|SVA_D:SVA:Retroposon|65|+","TE_intersect_:13657370|chr1|13657370|13659077|SVA_D:SVA:Retroposon|65|+","intron_intersect_chr1:13657355|13659577","intron_intersect_chr1:13657355|13659577"]
["chr1:13658224|13658479:+","chr1:13657352|13658224:+_chr1:13658479|13659577:+","UN_AL359771.1_LS0004","AL359771.1","lncRNA gene","no",4.98,0,0,0.001,12,0,0,"0(0)","ESCA","no","TE_intersect_:13657370|chr1|13657370|13659077|SVA_D:SVA:Retroposon|65|+","TE_intersect_:13657370|chr1|13657370|13659077|SVA_D:SVA:Retroposon|65|+","intron_intersect_chr1:13657355|13659577","intron_intersect_chr1:13657355|13659577"]
["chr1:13658224|13670473:+","chr1:13657401|13658224:+_chr1:13670473|13671716:+_chr1:13674241|13674771:+","UN_PRDM2_UP_LS0006","PRDM2","protein coding gene","yes",1.87,0,0,0.013,124,0,0,"0(0)","ESCA;HNSC","no","TE_intersect_:13657370|chr1|13657370|13659077|SVA_D:SVA:Retroposon|65|+","TE_intersect_:13670273|chr1|13670273|13670582|MLT1K:ERVL-MaLR:LTR|256|-","intron_intersect_chr1:13657355|13659577","NA"]
["chr1:13658306|13658434:+","chr1:13658157|13658306:+_chr1:13658434|13659075:+","UN_AL359771.1_LS0005","AL359771.1","lncRNA gene","no",1.56,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:13657370|chr1|13657370|13659077|SVA_D:SVA:Retroposon|65|+","TE_intersect_:13657370|chr1|13657370|13659077|SVA_D:SVA:Retroposon|65|+","intron_intersect_chr1:13657355|13659577","intron_intersect_chr1:13657355|13659577"]
["chr1:13671716|13674241:+","chr1:13657401|13658224:+_chr1:13670473|13671716:+_chr1:13674241|13674771:+","UN_PRDM2_UP_LS0008","PRDM2","protein coding gene","yes",7.14,0,0,0.025,235,0,0,"0(0)","CESC;ESCA;HNSC;LUSC","no","TE_intersect_:13671456|chr1|13671456|13671813|Charlie25:hAT-Charlie:DNA|275|-","NA","NA","NA"]
["chr1:137329|492191:+","chr1:137168|137329:+_chr1:492191|492244:+","UN_AC114498.1_UP_LS0001","AC114498.1","lncRNA gene","no",4.76,0,0,0.003,28,0,0,"0(0)","ESCA","no","NA","NA","NA","intron_intersect_chr1:491989|492768"]
["chr1:13778420|13780932:-","chr1:13778301|13778420:-_chr1:13780932|13781135:-","UN_PRDM2_LS0047","PRDM2","protein coding gene","yes",3.71,0,0,0.009,90,0,0,"0(0)","ESCA;LUSC","no","NA","NA","exon_intersect_chr1:13778418|13782831","exon_intersect_chr1:13778418|13782831"]
["chr1:139847|497105:-","chr1:137682|139847:-_chr1:497105|497299:-_chr1:498399|498976:-","UN_AL627309.7_UP_LS0009","AL627309.7","pseudogene","no",4.31,0.01,0,0.007,68,0.001,1,"0(0)","LAML","no","TE_intersect_:497037|chr1|497037|497139|MER8:TcMar-Tigger:DNA|216|-","TE_intersect_:139707|chr1|139707|140127|MER1A:hAT-Charlie:DNA|143|-","intron_intersect_chr1:496665|497109","intron_intersect_chr1:139847|140075"]
["chr1:14138643|14180435:+","chr1:14138457|14138643:+_chr1:14180435|14180593:+","UN_KAZN_LS0009","KAZN","protein coding gene","no",2.31,0,0,0.016,153,0,0,"0(0)","CESC;ESCA;HNSC","no","TE_intersect_:14138123|chr1|14138123|14138651|MLT1L:ERVL-MaLR:LTR|278|-","NA","NA","NA"]
["chr1:14221260|14254751:+","chr1:14175217|14175438:+_chr1:14180435|14180592:+_chr1:14216381|14216486:+_chr1:14219498|14219550:+_chr1:14221188|14221260:+_chr1:14254751|14256055:+","UN_KAZN_LS0057","KAZN","protein coding gene","no",1.01,0,0,0.002,23,0,0,"0(0)","THYM","no","NA","TE_intersect_:14254660|chr1|14254660|14254840|MSTA:ERVL-MaLR:LTR|168|-","NA","NA"]
["chr1:14222107|14222214:-","chr1:14221891|14222107:-_chr1:14222214|14222290:-_chr1:14223054|14223239:-_chr1:14282636|14282884:-_chr1:14304385|14304489:-","UN_KAZN_LS0062","KAZN","protein coding gene","no",2.47,0,0,0.003,29,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:14222107|14223054","intron_intersect_chr1:14222107|14223054"]
["chr1:14222290|14223054:-","chr1:14221891|14222107:-_chr1:14222214|14222290:-_chr1:14223054|14223239:-_chr1:14282636|14282884:-_chr1:14304385|14304489:-","UN_KAZN_LS0063","KAZN","protein coding gene","no",2.73,0,0,0.003,32,0,0,"0(0)","SARC","no","TE_intersect_:14222946|chr1|14222946|14223218|LTR41B:ERVL:LTR|215|-","NA","exon_intersect_chr1:14223054|14223118","intron_intersect_chr1:14222107|14223054"]
["chr1:14282884|14304385:-","chr1:14276346|14278142:-_chr1:14282636|14282884:-_chr1:14304385|14304664:-","UN_KAZN_LS0085","KAZN","protein coding gene","no",2.62,0,0,0.009,83,0,0,"0(0)","SARC","no","NA","NA","NA","NA"]
["chr1:14304663|14304809:+","chr1:14180434|14180592:+_chr1:14304590|14304663:+_chr1:14304809|14304864:+","UN_KAZN_LS0088","KAZN","protein coding gene","no",2.14,0,0,0.004,40,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr1:143415411|143420073:-","chr1:143401433|143401780:-_chr1:143415311|143415411:-_chr1:143420073|143420207:-","UN_LINC01691_UP_LS0080","LINC01691","lncRNA gene","no",2.33,0,0,0.004,39,0,0,"0(0)","PCPG","no","NA","TE_intersect_:143414994|chr1|143414994|143416258|L1MEc:L1:LINE|197|-","exon_intersect_chr1:143420073|143420207","NA"]
["chr1:143487413|143497000:-","chr1:143486293|143487413:-_chr1:143497000|143497099:-","UN_AC239859.5_LS0006","AC239859.5","pseudogene","no",8.72,0,0,0.008,80,0,0,"0(0)","GBM","no","NA","TE_intersect_:143487085|chr1|143487085|143487495|MER92A:ERV1:LTR|307|-","intron_intersect_chr1:143488353|143498744","intron_intersect_chr1:143479551|143487772"]
["chr1:1435821|1439081:+","chr1:1435671|1435821:+_chr1:1439081|1440765:+","UN_VWA1_LS0006","VWA1","protein coding gene","no",4.67,0,0,0.008,77,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:1435821|1436807","exon_intersect_chr1:1439081|1442882"]
["chr1:143631171|143635509:-","chr1:143629826|143631171:-_chr1:143635509|143635780:-_chr1:143644174|143644350:-","UN_NBPF17P_LS0004","NBPF17P","pseudogene","no",7.08,0,0,0.006,53,0,0,"0(0)","TGCT","no","NA","TE_intersect_:143630930|chr1|143630930|143631226|AluSx1:Alu:SINE|152|+","exon_intersect_chr1:143635509|143635641","intron_intersect_chr1:143620527|143635509"]
["chr1:143848069|143904227:-","chr1:143846897|143848069:-_chr1:143904227|143904650:-","UN_AC239798.3_UP_LS0001","AC239798.3","pseudogene","no",4.51,0,0,0.002,21,0,0,"0(0)","ACC","no","NA","NA","exon_intersect_chr1:143904223|143904650","NA"]
["chr1:1440274|1440420:-","chr1:1440039|1440149:-_chr1:1440215|1440274:-_chr1:1440420|1440643:-","UN_VWA1_LS0128","VWA1","protein coding gene","no",3.69,0,0,0.004,37,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:1439081|1442882","exon_intersect_chr1:1439081|1442882"]
["chr1:1440532|1440595:-","chr1:1440240|1440532:-_chr1:1440595|1440767:-","UN_VWA1_LS0161","VWA1","protein coding gene","no",5.34,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1439081|1442882","exon_intersect_chr1:1439081|1442882"]
["chr1:1442852|1497046:+","chr1:1435735|1435821:+_chr1:1436927|1437484:+_chr1:1439081|1442852:+_chr1:1497046|1497848:+","UN_AL645728.2_UP_LS0001","AL645728.2","pseudogene","no",1.49,0,0,0.006,58,0,0,"0(0)","CHOL;OV","no","NA","NA","exon_intersect_chr1:1439081|1442882","exon_intersect_chr1:1495485|1497848"]
["chr1:144552658|144560048:+","chr1:144552309|144552658:+_chr1:144560048|144560695:+","UN_PPIAL4F_UP_LS0011","PPIAL4F","protein coding gene","no",2.09,0,0,0.005,45,0,0,"0(0)","LGG","no","NA","TE_intersect_:144559989|chr1|144559989|144560154|LTR75:ERVL:LTR|256|-","NA","NA"]
["chr1:144716141|144718517:-","chr1:144716033|144716141:-_chr1:144718517|144718656:-","UN_FP700111.1_LS0006","FP700111.1","lncRNA gene","no",2.06,0,0,0.002,19,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:144701159|144754572","intron_intersect_chr1:144701159|144754572"]
["chr1:144955601|144957548:-","chr1:144897236|144897340:-_chr1:144905091|144905219:-_chr1:144905859|144906074:-_chr1:144914692|144914754:-_chr1:144955439|144955601:-_chr1:144957548|144957595:-_chr1:144960338|144960398:-_chr1:144995008|144995200:-_chr1:145092835|145093443:-_chr1:145094895|145094975:-","UN_SRGAP2B_LS0009","SRGAP2B","protein coding gene","no",1.4,0,0,0.003,29,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:144955601|144965025","intron_intersect_chr1:144955601|144965025"]
["chr1:1450924|1452046:+","chr1:1450909|1450924:+_chr1:1452046|1452122:+_chr1:1452365|1452434:+_chr1:1454345|1454500:+_chr1:1455460|1455519:+_chr1:1455791|1455916:+_chr1:1456225|1456349:+_chr1:1457129|1457180:+_chr1:1459161|1459231:+_chr1:1460750|1460917:+_chr1:1462600|1462708:+_chr1:1468384|1470161:+","UN_ATAD3C_LS0003","ATAD3C","protein coding gene","no",0.9,0,0,0.004,36,0,0,"0(0)","THYM;UCS","no","NA","NA","intron_intersect_chr1:1450758|1452046","exon_intersect_chr1:1452046|1452122"]
["chr1:145164638|145170942:-","chr1:145164100|145164638:-_chr1:145170942|145181367:-","UN_LINC01145_LS0005","LINC01145","pseudogene","no",8.51,0,0,0.006,59,0,0,"0(0)","OV","no","NA","TE_intersect_:145164072|chr1|145164072|145164687|MER49:ERV1:LTR|188|-","exon_intersect_chr1:145170942|145171185","exon_intersect_chr1:145164099|145169086"]
["chr1:145201301|145214725:-","chr1:145193764|145201301:-_chr1:145214725|145214731:-_chr1:145215639|145215746:-","UN_LINC01145_LS0035","LINC01145","pseudogene","no",0.43,0,0,0.005,50,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:145214677|145214731","intron_intersect_chr1:145201301|145214677"]
["chr1:145413130|145414751:-","chr1:145411779|145413130:-_chr1:145414751|145414849:-_chr1:145420488|145420756:-_chr1:145422796|145422984:-_chr1:145423314|145423431:-_chr1:145424780|145425640:-","UN_NBPF20_UP_LS0012","NBPF20","protein coding gene","no",1.11,0,0,0.002,21,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr1:145420756|145433255:-","chr1:145413394|145420756:-_chr1:145433255|145434093:-","UN_NBPF20_UP_LS0021","NBPF20","protein coding gene","no",2.31,0,0,0.002,21,0,0,"0(0)","THYM","no","TE_intersect_:145432971|chr1|145432971|145433754|L1MEc:L1:LINE|210|-","TE_intersect_:145420733|chr1|145420733|145420874|L2a:L2:LINE|277|-","NA","NA"]
["chr1:145432384|145433287:+","chr1:145431700|145432384:+_chr1:145433287|145433384:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0005","AC239860.2","pseudogene","no",1.59,0,0,0.005,46,0,0,"0(0)","THYM","no","NA","TE_intersect_:145432971|chr1|145432971|145433754|L1MEc:L1:LINE|210|-","NA","NA"]
["chr1:145432908|145433255:-","chr1:145413419|145416128:-_chr1:145420488|145420756:-_chr1:145422796|145422984:-_chr1:145423314|145423431:-_chr1:145424780|145425150:-_chr1:145425323|145432908:-_chr1:145433255|145434302:-","UN_RF00003_UP_LS0011","RF00003","small non-coding RNA gene","no",1.11,0,0,0.001,13,0,0,"0(0)","THYM","no","TE_intersect_:145432971|chr1|145432971|145433754|L1MEc:L1:LINE|210|-","NA","NA","NA"]
["chr1:145433384|145434172:+","chr1:145431700|145432384:+_chr1:145433287|145433384:+_chr1:145434172|145434293:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0006","AC239860.2","pseudogene","no",3.5,0,0,0.001,12,0,0,"0(0)","THYM","no","TE_intersect_:145432971|chr1|145432971|145433754|L1MEc:L1:LINE|210|-","TE_intersect_:145434139|chr1|145434139|145434450|AluSc8:Alu:SINE|90|-","NA","NA"]
["chr1:145433384|145437017:+","chr1:145431700|145432384:+_chr1:145433287|145433384:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0007","AC239860.2","pseudogene","no",4.64,0,0,0.005,46,0,0,"0(0)","THYM","no","TE_intersect_:145432971|chr1|145432971|145433754|L1MEc:L1:LINE|210|-","NA","NA","NA"]
["chr1:145433582|145437017:+","chr1:145431830|145432384:+_chr1:145433287|145433582:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441937|145442152:+_chr1:145443200|145443355:+","UN_AC239860.2_UP_LS0011","AC239860.2","pseudogene","no",1.8,0,0,0.001,12,0,0,"0(0)","THYM","no","TE_intersect_:145432971|chr1|145432971|145433754|L1MEc:L1:LINE|210|-","NA","NA","NA"]
["chr1:145434293|145437017:+","chr1:145431700|145432384:+_chr1:145433287|145433384:+_chr1:145434172|145434293:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0014","AC239860.2","pseudogene","no",2.91,0,0,0.002,22,0,0,"0(0)","THYM","no","TE_intersect_:145434139|chr1|145434139|145434450|AluSc8:Alu:SINE|90|-","NA","NA","NA"]
["chr1:145437332|145437852:+","chr1:145434172|145434293:+_chr1:145437017|145437332:+_chr1:145437852|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0016","AC239860.2","pseudogene","no",2.82,0,0,0.002,17,0,0,"0(0)","THYM","no","NA","TE_intersect_:145437792|chr1|145437792|145438100|AluSx:Alu:SINE|136|-","NA","NA"]
["chr1:145437332|145439032:+","chr1:145431700|145432384:+_chr1:145433287|145433384:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0019","AC239860.2","pseudogene","no",5.27,0,0,0.008,78,0,0,"0(0)","THYM","no","NA","TE_intersect_:145438844|chr1|145438844|145439271|L1MEh:L1:LINE|304|-","NA","NA"]
["chr1:145438249|145439032:+","chr1:145431691|145432384:+_chr1:145433287|145433384:+_chr1:145437017|145437332:+_chr1:145437852|145438249:+_chr1:145439032|145439116:+_chr1:145441937|145442215:+","UN_AC239860.2_UP_LS0022","AC239860.2","pseudogene","no",6.79,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","TE_intersect_:145438844|chr1|145438844|145439271|L1MEh:L1:LINE|304|-","NA","NA"]
["chr1:145439116|145441937:+","chr1:145433254|145433384:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441937|145442152:+","UN_AC239860.2_UP_LS0023","AC239860.2","pseudogene","no",6.87,0,0,0.005,45,0,0,"0(0)","THYM","no","TE_intersect_:145438844|chr1|145438844|145439271|L1MEh:L1:LINE|304|-","NA","NA","NA"]
["chr1:145439116|145441966:+","chr1:145431700|145432384:+_chr1:145433287|145433384:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0025","AC239860.2","pseudogene","no",11.45,0,0,0.005,44,0,0,"0(0)","THYM","no","TE_intersect_:145438844|chr1|145438844|145439271|L1MEh:L1:LINE|304|-","NA","NA","NA"]
["chr1:145439116|145443200:+","chr1:145436880|145437332:+_chr1:145439032|145439116:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0026","AC239860.2","pseudogene","no",5.67,0,0,0.001,14,0,0,"0(0)","THYM","no","TE_intersect_:145438844|chr1|145438844|145439271|L1MEh:L1:LINE|304|-","TE_intersect_:145443002|chr1|145443002|145443397|MLT1B:ERVL-MaLR:LTR|224|+","NA","NA"]
["chr1:145442152|145443200:+","chr1:145431700|145432384:+_chr1:145433287|145433384:+_chr1:145437017|145437332:+_chr1:145439032|145439116:+_chr1:145441966|145442152:+_chr1:145443200|145443357:+","UN_AC239860.2_UP_LS0030","AC239860.2","pseudogene","no",27.96,0,0,0.002,19,0,0,"0(0)","THYM","no","NA","TE_intersect_:145443002|chr1|145443002|145443397|MLT1B:ERVL-MaLR:LTR|224|+","NA","NA"]
["chr1:145509236|145513138:+","chr1:145507444|145507599:+_chr1:145508494|145508607:+_chr1:145509047|145509236:+_chr1:145513138|145513376:+_chr1:145515329|145515445:+_chr1:145517170|145517313:+_chr1:145518400|145518538:+_chr1:145518845|145519840:+_chr1:145520553|145520649:+_chr1:145565939|145566088:+_chr1:145566185|145568699:+","UN_AC239860.1_LS0001","AC239860.1","pseudogene","no",2.13,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:145509236|145509926","exon_intersect_chr1:145513138|145513376"]
["chr1:145515445|145517170:+","chr1:145507444|145507599:+_chr1:145508494|145508607:+_chr1:145509047|145509236:+_chr1:145513138|145513376:+_chr1:145515329|145515445:+_chr1:145517170|145517313:+_chr1:145518400|145518538:+_chr1:145518845|145519840:+_chr1:145520553|145520649:+_chr1:145565939|145566088:+_chr1:145566185|145568699:+","UN_AC239860.1_LS0006","AC239860.1","pseudogene","no",1.89,0,0,0.003,26,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:145515445|145516012","exon_intersect_chr1:145517170|145517313"]
["chr1:145519840|145520553:+","chr1:145507444|145507599:+_chr1:145508494|145508607:+_chr1:145509047|145509236:+_chr1:145513138|145513376:+_chr1:145515329|145515445:+_chr1:145517170|145517313:+_chr1:145518400|145518538:+_chr1:145518845|145519840:+_chr1:145520553|145520649:+_chr1:145565939|145566088:+_chr1:145566185|145568699:+","UN_AC239860.1_LS0009","AC239860.1","pseudogene","no",1.61,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:145518891|145520553","exon_intersect_chr1:145520553|145520594"]
["chr1:145520649|145565939:+","chr1:145507444|145507599:+_chr1:145508494|145508607:+_chr1:145509047|145509236:+_chr1:145513138|145513376:+_chr1:145515329|145515445:+_chr1:145517170|145517313:+_chr1:145518400|145518538:+_chr1:145518845|145519840:+_chr1:145520553|145520649:+_chr1:145565939|145566088:+_chr1:145566185|145568699:+","UN_GPR89A_UP_LS0003","GPR89A","protein coding gene","no",1.52,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:145590866|145604205:+","chr1:145588100|145588606:+_chr1:145590778|145590866:+_chr1:145604205|145604963:+","UN_NBPF25P_LS0012","NBPF25P","pseudogene","no",8.46,0,0,0.003,27,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:145589039|145590886","intron_intersect_chr1:145602039|145607821"]
["chr1:1456349|1487195:+","chr1:1448079|1450041:+_chr1:1450681|1450758:+_chr1:1452046|1452122:+_chr1:1452365|1452434:+_chr1:1454345|1454500:+_chr1:1455460|1455519:+_chr1:1455791|1455916:+_chr1:1456225|1456349:+_chr1:1487195|1487305:+_chr1:1487863|1487914:+_chr1:1489204|1489274:+_chr1:1490257|1490424:+_chr1:1490563|1490671:+_chr1:1495485|1496201:+","UN_AL645728.2_UP_LS0013","AL645728.2","pseudogene","no",3.94,0,0,0.007,68,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:1456349|1457129","intron_intersect_chr1:1486668|1487863"]
["chr1:145665651|145669834:+","chr1:145608019|145608175:+_chr1:145616234|145616293:+_chr1:145618320|145618423:+_chr1:145623054|145623160:+_chr1:145623613|145623714:+_chr1:145630687|145630807:+_chr1:145631664|145631744:+_chr1:145643869|145643978:+_chr1:145645647|145646272:+_chr1:145647175|145647267:+_chr1:145663329|145663424:+_chr1:145665562|145665651:+_chr1:145669834|145670067:+_chr1:145670192|145670463:+","UN_GPR89A_LS0018","GPR89A","protein coding gene","no",3.16,0,0,0.004,37,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:145665651|145669625","exon_intersect_chr1:145669834|145670648"]
["chr1:145688023|145690217:-","chr1:145670987|145671489:-_chr1:145672730|145673020:-_chr1:145673657|145678645:-_chr1:145680912|145681107:-_chr1:145682500|145682636:-_chr1:145686477|145686726:-_chr1:145687812|145688023:-_chr1:145690217|145691802:-_chr1:145707317|145707580:-","UN_PDZK1_LS0016","PDZK1","protein coding gene","no",2.78,0,0,0.002,21,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr1:145688023|145691732","intron_intersect_chr1:145688023|145691732"]
["chr1:145688023|145721493:-","chr1:145670986|145671489:-_chr1:145672730|145673020:-_chr1:145673657|145673881:-_chr1:145678449|145678645:-_chr1:145680912|145681107:-_chr1:145682500|145682636:-_chr1:145686477|145686726:-_chr1:145687812|145688023:-_chr1:145721493|145721626:-","UN_NBPF25P_UP_LS0002","NBPF25P","pseudogene","no",4.47,0,0,0.005,47,0,0,"0(0)","ACC;GBM","no","NA","NA","intron_intersect_chr1:145719559|145724801","intron_intersect_chr1:145688023|145691732"]
["chr1:145745587|145746124:+","chr1:145745452|145745587:+_chr1:145746124|145746203:+","UN_RNF115_LS0012","RNF115","protein coding gene","no",1.58,0,0,0.008,72,0,0,"0(0)","ESCA","no","TE_intersect_:145745459|chr1|145745459|145745753|AluSq:Alu:SINE|99|-","TE_intersect_:145745944|chr1|145745944|145746246|AluSc8:Alu:SINE|99|+","exon_intersect_chr1:145738868|145746997","exon_intersect_chr1:145738868|145746997"]
["chr1:145753049|145768040:-","chr1:145746389|145746997:-_chr1:145747995|145748110:-_chr1:145750407|145750500:-_chr1:145751438|145751510:-_chr1:145752978|145753049:-_chr1:145768040|145768151:-","UN_RNF115_LS0027","RNF115","protein coding gene","no",9.91,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:145768031|chr1|145768031|145768184|MIRb:MIR:SINE|326|-","NA","intron_intersect_chr1:145753049|145771711","intron_intersect_chr1:145753049|145771711"]
["chr1:145766810|145962636:-","chr1:145766623|145766810:-_chr1:145962636|145962884:-","UN_PDZK1_UP_LS0003","PDZK1","protein coding gene","no",1621.66,0,0,0.003,33,0,0,"0(0)","LAML","no","NA","TE_intersect_:145765997|chr1|145765997|145768022|SVA_D:SVA:Retroposon|28|-","exon_intersect_chr1:145962421|145962968","intron_intersect_chr1:145753049|145771711"]
["chr1:145844822|145848675:+","chr1:145824014|145824369:+_chr1:145825757|145825923:+_chr1:145826454|145826709:+_chr1:145826820|145827005:+_chr1:145828749|145828837:+_chr1:145833260|145833364:+_chr1:145833490|145833582:+_chr1:145836494|145836574:+_chr1:145836815|145836866:+_chr1:145837536|145837596:+_chr1:145838056|145838206:+_chr1:145839890|145839991:+_chr1:145840116|145840165:+_chr1:145840922|145841071:+_chr1:145842339|145844822:+_chr1:145848675|145848954:+","UN_AC243547.1_UP_LS0002","AC243547.1","lncRNA gene","no",1.46,0,0,0.004,36,0,0,"0(0)","ESCA","no","TE_intersect_:145844638|chr1|145844638|145844899|AluSz:Alu:SINE|138|+","NA","NA","exon_intersect_chr1:145848522|145850269"]
["chr1:145878834|145879258:-","chr1:145866560|145866765:-_chr1:145867287|145867392:-_chr1:145867991|145868056:-_chr1:145868311|145868400:-_chr1:145871982|145873985:-_chr1:145874155|145876246:-_chr1:145876569|145876639:-_chr1:145876816|145876873:-_chr1:145877968|145878032:-_chr1:145878391|145878479:-_chr1:145878747|145878834:-_chr1:145879258|145879388:-_chr1:145885720|145885842:-","UN_ANKRD35_LS0015","ANKRD35","protein coding gene","no",1.23,0,0,0.006,56,0,0,"0(0)","CESC","no","NA","NA","exon_intersect_chr1:145879258|145879388","intron_intersect_chr1:145878479|145879258"]
["chr1:14602094|14615149:+","chr1:14602037|14602094:+_chr1:14615149|14617831:+","UN_KAZN_LS0127","KAZN","protein coding gene","no",1.43,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","TE_intersect_:14615144|chr1|14615144|14615206|L2c:L2:LINE|271|-","intron_intersect_chr1:14599223|14607334","intron_intersect_chr1:14607436|14692129"]
["chr1:14603154|14615149:+","chr1:14602805|14603154:+_chr1:14615149|14617826:+","UN_KAZN_LS0130","KAZN","protein coding gene","no",1.48,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","TE_intersect_:14615144|chr1|14615144|14615206|L2c:L2:LINE|271|-","intron_intersect_chr1:14599223|14607334","intron_intersect_chr1:14607436|14692129"]
["chr1:146044632|146049067:+","chr1:146044082|146044632:+_chr1:146049067|146051263:+","UN_LINC01719_UP_LS0002","LINC01719","lncRNA gene","no",1.96,0,0,0.003,30,0,0,"0(0)","LIHC","no","TE_intersect_:146044581|chr1|146044581|146045045|LTR2:ERV1:LTR|195|-","NA","NA","NA"]
["chr1:14607630|14615149:+","chr1:14603134|14603154:+_chr1:14607557|14607630:+_chr1:14615149|14617826:+","UN_KAZN_LS0131","KAZN","protein coding gene","no",1.42,0,0,0.001,12,0,0,"0(0)","TGCT","no","NA","TE_intersect_:14615144|chr1|14615144|14615206|L2c:L2:LINE|271|-","intron_intersect_chr1:14607436|14692129","intron_intersect_chr1:14607436|14692129"]
["chr1:146089347|146090062:-","chr1:146066293|146066561:-_chr1:146067180|146067288:-_chr1:146068003|146068175:-_chr1:146068772|146068823:-_chr1:146069543|146069715:-_chr1:146070324|146070432:-_chr1:146071147|146071319:-_chr1:146071968|146072019:-_chr1:146072729|146072901:-_chr1:146073500|146073551:-_chr1:146074271|146074443:-_chr1:146075046|146075154:-_chr1:146075869|146076041:-_chr1:146076706|146076757:-_chr1:146077467|146077639:-_chr1:146078236|146078287:-_chr1:146079007|146079179:-_chr1:146079782|146079890:-_chr1:146080605|146080777:-_chr1:146081436|146081487:-_chr1:146082197|146082369:-_chr1:146082966|146083017:-_chr1:146083737|146083909:-_chr1:146084518|146084626:-_chr1:146085341|146085513:-_chr1:146086164|146087096:-_chr1:146087693|146087744:-_chr1:146088464|146088636:-_chr1:146089239|146089347:-_chr1:146090062|146090234:-_chr1:146090881|146090932:-_chr1:146091642|146091814:-_chr1:146092411|146092462:-_chr1:146093182|146093354:-_chr1:146093957|146094065:-_chr1:146094780|146094952:-_chr1:146095603|146096536:-_chr1:146097133|146097184:-_chr1:146097904|146098076:-_chr1:146098679|146098787:-_chr1:146099502|146099674:-_chr1:146100325|146101258:-_chr1:146101855|146101906:-_chr1:146102626|146102798:-_chr1:146103401|146103509:-_chr1:146104224|146104396:-_chr1:146105043|146105094:-_chr1:146105804|146105976:-_chr1:146106573|146106624:-_chr1:146107344|146107516:-_chr1:146108119|146108227:-_chr1:146108942|146109114:-_chr1:146109751|146109802:-_chr1:146110512|146110684:-_chr1:146111281|146111332:-_chr1:146112054|146112226:-_chr1:146112829|146112937:-_chr1:146113652|146113824:-_chr1:146114469|146114520:-_chr1:146115230|146115402:-_chr1:146115999|146116050:-_chr1:146116772|146116944:-_chr1:146117547|146117655:-_chr1:146118370|146118542:-_chr1:146119195|146119246:-_chr1:146119956|146120128:-_chr1:146120725|146120776:-_chr1:146123106|146123278:-_chr1:146123927|146123978:-_chr1:146124688|146124860:-_chr1:146125465|146125516:-_chr1:146126236|146126402:-_chr1:146127028|146127079:-_chr1:146128119|146128282:-_chr1:146132186|146132237:-_chr1:146133523|146133728:-_chr1:146134193|146134265:-_chr1:146135307|146135521:-_chr1:146136353|146136455:-_chr1:146138236|146138445:-_chr1:146139809|146140020:-_chr1:146140484|146140556:-_chr1:146141604|146144804:-_chr1:146144907|146146497:-_chr1:146147665|146156229:-_chr1:146156480|146156815:-_chr1:146164751|146165010:-_chr1:146189300|146189381:-_chr1:146228709|146229014:-","NBPF10_LS031","NBPF10","protein coding gene","no",0.32,0,0,0.002,19,0,0,"0(0)","LAML","yes","NA","NA","exon_intersect_chr1:146090062|146090234","intron_intersect_chr1:146089347|146090062"]
["chr1:146108227|146108942:-","chr1:146107786|146108227:-_chr1:146108942|146109114:-_chr1:146109751|146109802:-_chr1:146110512|146111332:-_chr1:146112054|146112226:-_chr1:146112829|146112937:-_chr1:146113652|146113824:-_chr1:146114469|146114520:-_chr1:146115230|146115402:-_chr1:146115999|146116050:-_chr1:146116772|146116944:-_chr1:146117547|146117655:-_chr1:146118370|146118542:-_chr1:146119195|146119246:-_chr1:146119956|146120128:-_chr1:146120725|146120776:-_chr1:146121498|146122391:-_chr1:146123106|146123978:-_chr1:146124688|146124860:-_chr1:146125465|146125516:-_chr1:146126236|146126402:-_chr1:146127028|146127079:-_chr1:146128119|146128282:-_chr1:146132186|146132237:-_chr1:146133523|146133728:-_chr1:146134193|146134265:-_chr1:146135307|146135521:-_chr1:146136353|146136455:-_chr1:146138236|146138445:-_chr1:146139809|146140020:-_chr1:146140484|146140556:-_chr1:146141604|146141818:-_chr1:146142650|146142752:-_chr1:146144595|146144804:-_chr1:146144907|146156229:-_chr1:146156480|146156815:-_chr1:146164751|146165010:-_chr1:146189300|146189381:-_chr1:146228709|146229000:-","NBPF10_LS049","NBPF10","protein coding gene","no",0.12,0,0,0.003,26,0,0,"0(0)","LAML","yes","NA","NA","exon_intersect_chr1:146108942|146109114","intron_intersect_chr1:146108227|146108942"]
["chr1:146146497|146147665:-","chr1:146123355|146123978:-_chr1:146124688|146125516:-_chr1:146126236|146126408:-_chr1:146127028|146127079:-_chr1:146128119|146128282:-_chr1:146132186|146132237:-_chr1:146133523|146133728:-_chr1:146134193|146134265:-_chr1:146135307|146135521:-_chr1:146136353|146136455:-_chr1:146138236|146138445:-_chr1:146139809|146140020:-_chr1:146140484|146140556:-_chr1:146141604|146141818:-_chr1:146142650|146142752:-_chr1:146144595|146144804:-_chr1:146144907|146146497:-_chr1:146147665|146156229:-_chr1:146156480|146156815:-_chr1:146164751|146165010:-_chr1:146189300|146189381:-_chr1:146228709|146229000:-","UN_AC239799.1_LS0025","AC239799.1","protein coding gene","no",2,0.07,0,0.003,28,0.001,1,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:146147665|146147754","intron_intersect_chr1:146146320|146146521"]
["chr1:146229385|146235624:+","chr1:146229101|146229385:+_chr1:146235624|146237789:+","UN_AC239799.2_UP_LS0004","AC239799.2","lncRNA gene","no",0.89,0,0,0.018,168,0,0,"0(0)","BRCA;GBM;OV;THYM","no","NA","NA","NA","NA"]
["chr1:146376421|146376815:-","chr1:146316641|146321996:-_chr1:146325224|146325370:-_chr1:146328051|146328211:-_chr1:146369971|146370026:-_chr1:146374742|146376421:-_chr1:146376815|146376841:-","UN_SEC22B4P_LS0026","SEC22B4P","pseudogene","no",0.57,0,0,0.003,26,0,0,"0(0)","OV","no","TE_intersect_:146376806|chr1|146376806|146376970|U1:snRNA:snRNA|0|+","NA","exon_intersect_chr1:146376807|146376970","NA"]
["chr1:146377587|146377851:-","chr1:146376890|146377587:-_chr1:146377851|146378180:-","UN_SEC22B4P_LS0031","SEC22B4P","pseudogene","no",1.24,0,0,0.006,54,0,0,"0(0)","OV","no","NA","TE_intersect_:146377480|chr1|146377480|146377645|LTR75:ERVL:LTR|256|+","NA","NA"]
["chr1:146377587|146383357:-","chr1:146376974|146377587:-_chr1:146383357|146383617:-","UN_SEC22B4P_LS0034","SEC22B4P","pseudogene","no",1.09,0,0,0.002,19,0,0,"0(0)","TGCT","no","NA","TE_intersect_:146377480|chr1|146377480|146377645|LTR75:ERVL:LTR|256|+","NA","NA"]
["chr1:146448536|146451214:+","chr1:146448352|146448536:+_chr1:146451214|146451374:+_chr1:146452197|146452253:+_chr1:146452513|146452841:+","UN_AC245407.1_UP_LS0002","AC245407.1","pseudogene","no",2.8,0,0,0.005,48,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:146451374|146452197:+","chr1:146448352|146448536:+_chr1:146451214|146451374:+_chr1:146452197|146452253:+_chr1:146452513|146452841:+","UN_AC245407.1_UP_LS0004","AC245407.1","pseudogene","no",3.4,0,0,0.009,88,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:146505412|146506585:+","chr1:146486052|146487520:+_chr1:146504741|146504862:+_chr1:146505331|146505412:+_chr1:146506585|146507282:+_chr1:146516253|146516446:+_chr1:146524728|146525289:+","UN_HYDIN2_LS0022","HYDIN2","pseudogene","no",1.79,0,0,0.003,28,0,0,"0(0)","OV","no","TE_intersect_:146505283|chr1|146505283|146505571|L1ME3G:L1:LINE|273|-","NA","NA","NA"]
["chr1:146505412|146506762:+","chr1:146487417|146487520:+_chr1:146504741|146504862:+_chr1:146505331|146505412:+_chr1:146506762|146508746:+","UN_HYDIN2_LS0023","HYDIN2","pseudogene","no",1.52,0,0,0.004,42,0,0,"0(0)","GBM;OV","no","TE_intersect_:146505283|chr1|146505283|146505571|L1ME3G:L1:LINE|273|-","NA","NA","NA"]
["chr1:146509|153354:-","chr1:137682|139696:-_chr1:139790|139847:-_chr1:140075|143011:-_chr1:146386|146509:-_chr1:153354|153543:-_chr1:155767|155831:-_chr1:164263|164791:-_chr1:165884|165942:-_chr1:168100|168165:-_chr1:169049|169264:-_chr1:172557|172688:-_chr1:173753|173862:-","UN_AL627309.5_LS0010","AL627309.5","lncRNA gene","no",0.86,0,0,0.004,35,0,0,"0(0)","ESCA","no","TE_intersect_:153119|chr1|153119|153429|MER21C:ERVL:LTR|217|+","TE_intersect_:146228|chr1|146228|146522|AluJr:Alu:SINE|235|+","intron_intersect_chr1:149707|155767","exon_intersect_chr1:146386|149707"]
["chr1:146530492|146531892:-","chr1:146528728|146530492:-_chr1:146531892|146532056:-","UN_HYDIN2_LS0033","HYDIN2","pseudogene","no",6.66,0,0,0.009,85,0,0,"0(0)","TGCT","no","TE_intersect_:146531809|chr1|146531809|146532189|MSTA:ERVL-MaLR:LTR|133|-","TE_intersect_:146530329|chr1|146530329|146531809|MSTA-int:ERVL-MaLR:LTR|130|-","NA","NA"]
["chr1:146612740|146620596:-","chr1:146612403|146612740:-_chr1:146620596|146620831:-","UN_HYDIN2_LS0044","HYDIN2","pseudogene","no",1.62,0,0,0.007,67,0,0,"0(0)","OV","no","TE_intersect_:146620501|chr1|146620501|146620740|MIR:MIR:SINE|217|-","TE_intersect_:146612461|chr1|146612461|146612766|AluY:Alu:SINE|46|+","intron_intersect_chr1:146617147|146622443","intron_intersect_chr1:146595171|146617029"]
["chr1:146620788|146621033:-","chr1:146606777|146612740:-_chr1:146620596|146620788:-_chr1:146621033|146621379:-","UN_HYDIN2_LS0047","HYDIN2","pseudogene","no",3.41,0,0,0.005,46,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:146617147|146622443","intron_intersect_chr1:146617147|146622443"]
["chr1:146933871|146934254:-","chr1:146924952|146933871:-_chr1:146934254|146934567:-","UN_RF00619_UP_LS0001","RF00619","small non-coding RNA gene","no",3.73,0,0,0.003,32,0,0,"0(0)","DLBC;LAML;TGCT","no","NA","NA","NA","NA"]
["chr1:146984949|146989702:+","chr1:146938314|146939012:+_chr1:146943291|146943562:+_chr1:146949324|146949422:+_chr1:146951348|146951489:+_chr1:146959859|146960006:+_chr1:146960109|146960318:+_chr1:146962161|146962263:+_chr1:146963095|146963309:+_chr1:146964357|146964429:+_chr1:146964893|146965104:+_chr1:146966464|146966673:+_chr1:146968448|146968550:+_chr1:146969382|146969596:+_chr1:146970647|146970719:+_chr1:146971183|146971394:+_chr1:146972751|146972960:+_chr1:146974739|146974841:+_chr1:146975677|146975891:+_chr1:146976929|146977001:+_chr1:146977466|146977671:+_chr1:146978959|146979010:+_chr1:146982928|146983091:+_chr1:146984134|146984185:+_chr1:146984813|146984949:+_chr1:146989702|146989746:+_chr1:146990466|146990517:+_chr1:146991113|146991285:+_chr1:146991995|146992046:+_chr1:146992712|146992884:+_chr1:146993599|146993707:+_chr1:146994332|146994913:+_chr1:146995995|146996585:+","UN_NBPF12_LS0051","NBPF12","protein coding gene","yes",1.4,0,0,0.004,36,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr1:146984813|146984985","exon_intersect_chr1:146989574|146989746"]
["chr1:147414857|147514338:-","chr1:147414457|147414857:-_chr1:147514338|147514448:-_chr1:147515521|147515676:-_chr1:147517443|147517875:-","UN_LINC00624_LS0008","LINC00624","lncRNA gene","no",12.68,0,0,0.004,36,0,0,"0(0)","TGCT","no","NA","TE_intersect_:147414436|chr1|147414436|147415029|MLT1E2:ERVL-MaLR:LTR|265|-","exon_intersect_chr1:147514338|147514448","intron_intersect_chr1:147408689|147419050"]
["chr1:147515676|147517259:-","chr1:147414457|147414857:-_chr1:147514338|147514448:-_chr1:147515521|147515676:-_chr1:147517259|147517325:-_chr1:147517443|147517875:-","UN_LINC00624_LS0016","LINC00624","lncRNA gene","no",3.94,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:147517148|chr1|147517148|147517316|MIRb:MIR:SINE|303|-","NA","intron_intersect_chr1:147515676|147517443","intron_intersect_chr1:147515676|147517443"]
["chr1:147624663|147624847:-","chr1:147624633|147624663:-_chr1:147624847|147625111:-","UN_BCL9_LS0035","BCL9","protein coding gene","yes",2.47,0,0,0.006,57,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:147623842|147626216","exon_intersect_chr1:147623842|147626216"]
["chr1:147643619|147648246:-","chr1:147642235|147643619:-_chr1:147648246|147648411:-_chr1:147650143|147650238:-_chr1:147652449|147652549:-_chr1:147654194|147654326:-_chr1:147655161|147655248:-_chr1:147658960|147659039:-_chr1:147659396|147659526:-_chr1:147659647|147659775:-_chr1:147669830|147670048:-","UN_ACP6_LS0004","ACP6","protein coding gene","no",2.21,0,0,0.006,62,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:147642235|147648411","exon_intersect_chr1:147642235|147648411"]
["chr1:14770172|14774113:-","chr1:14767383|14770172:-_chr1:14774113|14774283:-_chr1:14777534|14777786:-","UN_KAZN_LS0154","KAZN","protein coding gene","no",4.57,0,0,0.008,78,0,0,"0(0)","LAML;TGCT","no","NA","TE_intersect_:14769734|chr1|14769734|14770517|L2b:L2:LINE|323|-","intron_intersect_chr1:14692613|14924130","intron_intersect_chr1:14692613|14924130"]
["chr1:14774283|14777534:-","chr1:14767383|14770172:-_chr1:14774113|14774283:-_chr1:14777534|14777786:-","UN_KAZN_LS0157","KAZN","protein coding gene","no",3.49,0,0,0.008,80,0,0,"0(0)","LAML;TGCT","no","TE_intersect_:14777444|chr1|14777444|14777701|L2a:L2:LINE|295|+","TE_intersect_:14774166|chr1|14774166|14774332|MIRb:MIR:SINE|325|+","intron_intersect_chr1:14692613|14924130","intron_intersect_chr1:14692613|14924130"]
["chr1:148011667|148016161:+","chr1:148011626|148011667:+_chr1:148016161|148016258:+_chr1:148019937|148020208:+_chr1:148021914|148021998:+_chr1:148024530|148024719:+_chr1:148025777|148025929:+","UN_AC239803.3_UP_LS0003","AC239803.3","lncRNA gene","no",2.55,0,0,0.016,155,0,0,"0(0)","CHOL;PRAD","no","NA","TE_intersect_:148015845|chr1|148015845|148016628|L1MEc:L1:LINE|211|-","exon_intersect_chr1:148010458|148012099","NA"]
["chr1:148015274|148016161:+","chr1:148014900|148015274:+_chr1:148016161|148016456:+_chr1:148019893|148020208:+_chr1:148021914|148021998:+_chr1:148024530|148024719:+_chr1:148025777|148025931:+","UN_AC239803.3_UP_LS0005","AC239803.3","lncRNA gene","no",0.88,0,0,0.005,46,0,0,"0(0)","THYM","no","NA","TE_intersect_:148015845|chr1|148015845|148016628|L1MEc:L1:LINE|211|-","NA","NA"]
["chr1:148016258|148019893:+","chr1:148014957|148015274:+_chr1:148016161|148016258:+_chr1:148019893|148020208:+_chr1:148021914|148021998:+_chr1:148024530|148024719:+_chr1:148025777|148025931:+","UN_AC239803.3_UP_LS0006","AC239803.3","lncRNA gene","no",3.15,0,0,0.004,39,0,0,"0(0)","THYM","no","TE_intersect_:148015845|chr1|148015845|148016628|L1MEc:L1:LINE|211|-","NA","NA","NA"]
["chr1:148016456|148019893:+","chr1:148014900|148015274:+_chr1:148016161|148016456:+_chr1:148019893|148020208:+_chr1:148021914|148021998:+_chr1:148024530|148024719:+_chr1:148025777|148025931:+","UN_AC239803.3_UP_LS0008","AC239803.3","lncRNA gene","no",2.63,0,0,0.001,13,0,0,"0(0)","THYM","no","TE_intersect_:148015845|chr1|148015845|148016628|L1MEc:L1:LINE|211|-","NA","NA","NA"]
["chr1:148020208|148020733:+","chr1:148014954|148015274:+_chr1:148016161|148016258:+_chr1:148019937|148020208:+_chr1:148020733|148021131:+_chr1:148021914|148021998:+_chr1:148024530|148024719:+_chr1:148025777|148025931:+","UN_AC239803.3_UP_LS0013","AC239803.3","lncRNA gene","no",3.03,0,0,0.002,17,0,0,"0(0)","THYM","no","NA","TE_intersect_:148020674|chr1|148020674|148020981|AluSx:Alu:SINE|153|-","NA","NA"]
["chr1:148021131|148021914:+","chr1:148013481|148013553:+_chr1:148016161|148016258:+_chr1:148020870|148021131:+_chr1:148021914|148021998:+_chr1:148024530|148024719:+_chr1:148025777|148025934:+","UN_PDE4DIPP1_UP_LS0005","PDE4DIPP1","pseudogene","no",3.69,0,0,0.002,23,0,0,"0(0)","THYM","no","NA","TE_intersect_:148021721|chr1|148021721|148022256|L1MEh:L1:LINE|304|-","NA","exon_intersect_chr1:148021850|148021998"]
["chr1:148156406|148156790:+","chr1:148156071|148156406:+_chr1:148156790|148158546:+","UN_AC239803.1_UP_LS0004","AC239803.1","lncRNA gene","no",2.74,0,0,0.013,126,0,0,"0(0)","DLBC;LAML;TGCT","no","NA","NA","NA","NA"]
["chr1:148160151|148161584:+","chr1:148159998|148160151:+_chr1:148161584|148161636:+_chr1:148162120|148162220:+_chr1:148162424|148162641:+_chr1:148162832|148162992:+_chr1:148163792|148166313:+","UN_AC239809.3_LS0001","AC239809.3","lncRNA gene","no",2.63,0,0,0.003,26,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:148159213|148162859","exon_intersect_chr1:148159213|148162859"]
["chr1:148161636|148162424:+","chr1:148160088|148160151:+_chr1:148161584|148161636:+_chr1:148162424|148166316:+","UN_AC239809.3_LS0004","AC239809.3","lncRNA gene","no",2.48,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:148159213|148162859","exon_intersect_chr1:148159213|148162859"]
["chr1:148201488|148202888:+","chr1:148201323|148201488:+_chr1:148202888|148204453:+","UN_AC239809.3_LS0008","AC239809.3","lncRNA gene","no",8.87,0,0,0.007,67,0,0,"0(0)","TGCT","no","TE_intersect_:148201189|chr1|148201189|148201570|MSTA:ERVL-MaLR:LTR|136|+","TE_intersect_:148201570|chr1|148201570|148203050|MSTA-int:ERVL-MaLR:LTR|130|+","intron_intersect_chr1:148201478|148205624","intron_intersect_chr1:148201478|148205624"]
["chr1:148217130|148226101:-","chr1:148217100|148217130:-_chr1:148226101|148226253:-_chr1:148226494|148226621:-_chr1:148226735|148226798:-_chr1:148227988|148228069:-_chr1:148228536|148228657:-_chr1:148245883|148245990:-","UN_AC239809.3_LS0010","AC239809.3","lncRNA gene","no",1.13,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:148226101|148226253","exon_intersect_chr1:148216937|148218888"]
["chr1:148228069|148245883:-","chr1:148208304|148208654:-_chr1:148216937|148217130:-_chr1:148226494|148226621:-_chr1:148227988|148228069:-_chr1:148245883|148246167:-","UN_AC239809.3_LS0014","AC239809.3","lncRNA gene","no",1.84,0,0,0.011,103,0,0,"0(0)","LGG","no","NA","TE_intersect_:148227826|chr1|148227826|148228116|L1ME3G:L1:LINE|267|+","intron_intersect_chr1:148234489|148246169","exon_intersect_chr1:148227988|148228070"]
["chr1:148253471|148254807:-","chr1:148252223|148253471:-_chr1:148254807|148255066:-","UN_AC239809.3_LS0019","AC239809.3","lncRNA gene","no",2.34,0,0,0.004,34,0,0,"0(0)","TGCT","no","NA","TE_intersect_:148253378|chr1|148253378|148254059|LTR51:ERV1:LTR|174|-","intron_intersect_chr1:148246685|148254929","intron_intersect_chr1:148246685|148254929"]
["chr1:148264358|148264709:+","chr1:148263476|148264358:+_chr1:148264709|148265462:+","UN_AC245100.6_UP_LS0003","AC245100.6","lncRNA gene","no",1.75,0,0,0.004,42,0,0,"0(0)","ESCA","no","TE_intersect_:148264230|chr1|148264230|148264517|L1ME2:L1:LINE|271|+","NA","NA","NA"]
["chr1:148273083|148274322:-","chr1:148271821|148272035:-_chr1:148272900|148273083:-_chr1:148274322|148274494:-","UN_LINC01731_LS0002","LINC01731","lncRNA gene","no",4.65,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:148273541|chr1|148273541|148274342|L1PA16:L1:LINE|136|+","NA","intron_intersect_chr1:148273083|148280666","intron_intersect_chr1:148273083|148280666"]
["chr1:148273083|148275238:-","chr1:148271879|148272035:-_chr1:148272900|148273083:-_chr1:148275238|148275374:-_chr1:148281038|148281263:-","UN_LINC01731_LS0004","LINC01731","lncRNA gene","no",2,0,0,0.002,21,0,0,"0(0)","UCS","no","TE_intersect_:148275128|chr1|148275128|148275392|AluSx:Alu:SINE|167|+","NA","intron_intersect_chr1:148273083|148280666","intron_intersect_chr1:148273083|148280666"]
["chr1:14833862|14836347:-","chr1:14828321|14833862:-_chr1:14836347|14836708:-","UN_KAZN_LS0179","KAZN","protein coding gene","no",3.58,0,0,0.007,70,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:14692613|14924130","intron_intersect_chr1:14692613|14924130"]
["chr1:148344381|148379236:-","chr1:148333485|148335919:-_chr1:148344213|148344381:-_chr1:148379236|148379554:-_chr1:148435146|148435354:-_chr1:148459602|148459757:-","UN_LINC01138_LS0012","LINC01138","lncRNA gene","no",0.92,0,0,0.004,34,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:148378056|148379554","exon_intersect_chr1:148344229|148344636"]
["chr1:148427958|148428751:+","chr1:148424610|148425664:+_chr1:148427836|148427958:+_chr1:148428751|148428847:+_chr1:148432095|148432536:+","UN_AC245100.4_LS0023","AC245100.4","pseudogene","no",3.53,0,0,0.011,105,0,0,"0(0)","GBM;OV","no","NA","NA","intron_intersect_chr1:148427943|148428729","exon_intersect_chr1:148428729|148429361"]
["chr1:148433543|148447104:+","chr1:148433507|148433543:+_chr1:148447104|148448623:+","UN_LINC01138_LS0051","LINC01138","lncRNA gene","no",2.6,0,0,0.003,31,0,0,"0(0)","GBM","no","TE_intersect_:148433382|chr1|148433382|148433731|MER66-int:ERV1:LTR|138|-","TE_intersect_:148446991|chr1|148446991|148447142|Kanga11a:TcMar-Tc2:DNA|349|+","exon_intersect_chr1:148432959|148433643","intron_intersect_chr1:148436926|148458501"]
["chr1:148440216|148445365:+","chr1:148439952|148440216:+_chr1:148445365|148445592:+","UN_LINC01138_LS0070","LINC01138","lncRNA gene","no",4.1,0,0,0.004,40,0,0,"0(0)","LIHC","no","TE_intersect_:148439975|chr1|148439975|148440300|THE1B:ERVL-MaLR:LTR|122|+","NA","intron_intersect_chr1:148436926|148458501","intron_intersect_chr1:148436926|148458501"]
["chr1:148538006|148574878:-","chr1:148532980|148533248:-_chr1:148533861|148533969:-_chr1:148534684|148534856:-_chr1:148535453|148535504:-_chr1:148536224|148536396:-_chr1:148537011|148537119:-_chr1:148537834|148538006:-_chr1:148574878|148574929:-_chr1:148575639|148575811:-_chr1:148576410|148576461:-_chr1:148577183|148577355:-_chr1:148577983|148578034:-_chr1:148579074|148579237:-_chr1:148583141|148583192:-_chr1:148584471|148584676:-_chr1:148585141|148585213:-_chr1:148586255|148586469:-_chr1:148587301|148587403:-_chr1:148589184|148589393:-_chr1:148590757|148590968:-_chr1:148591432|148591504:-_chr1:148592552|148592766:-_chr1:148593598|148593700:-_chr1:148595543|148595752:-_chr1:148595855|148598343:-_chr1:148598613|148607159:-_chr1:148607410|148607745:-_chr1:148615691|148615950:-_chr1:148640016|148640089:-_chr1:148679462|148679751:-","UN_NBPF14_LS0036","NBPF14","protein coding gene","no",0.18,0,0,0.005,44,0.001,1,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:148574878|148574929","intron_intersect_chr1:148538006|148538649"]
["chr1:148558136|148567598:+","chr1:148558027|148558136:+_chr1:148567598|148567778:+","UN_NBPF14_LS0053","NBPF14","protein coding gene","no",5.34,0,0,0.003,31,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:148557542|148558252","intron_intersect_chr1:148567003|148567713"]
["chr1:1487182|1524912:-","chr1:1486673|1487182:-_chr1:1524912|1525241:-","UN_LINC01770_UP_LS0015","LINC01770","lncRNA gene","no",1.72,0,0,0.004,37,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:1524397|1525240","intron_intersect_chr1:1486668|1487863"]
["chr1:148808737|148809307:+","chr1:148808485|148808737:+_chr1:148809307|148813301:+","UN_PDE4DIP_LS0001","PDE4DIP","protein coding gene","no",2.69,0,0,0.009,82,0,0,"0(0)","LGG;PCPG","no","NA","NA","intron_intersect_chr1:148808737|148839483","intron_intersect_chr1:148808737|148839483"]
["chr1:14890024|14890102:-","chr1:14888740|14888868:-_chr1:14889961|14890024:-_chr1:14890102|14890232:-","UN_KAZN_LS0192","KAZN","protein coding gene","no",2.73,0,0,0.004,43,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:14692613|14924130","intron_intersect_chr1:14692613|14924130"]
["chr1:148900985|148929197:+","chr1:148900611|148900985:+_chr1:148929197|148929273:+_chr1:148931800|148931923:+_chr1:148932113|148932437:+","UN_PDE4DIP_LS0025","PDE4DIP","protein coding gene","no",1.72,0,0,0.002,17,0,0,"0(0)","KIRP","no","NA","NA","intron_intersect_chr1:148889894|148915507","exon_intersect_chr1:148929137|148931923"]
["chr1:149176380|149176467:-","chr1:149176242|149176380:-_chr1:149176467|149176845:-_chr1:149177192|149177286:-","UN_AC245297.3_LS0013","AC245297.3","lncRNA gene","no",2.61,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:149176250|149177158","intron_intersect_chr1:149176250|149177158"]
["chr1:149177212|149646599:+","chr1:149176022|149177212:+_chr1:149646599|149647064:+_chr1:149647381|149647610:+","UN_FAM91A2P_UP_LS0003","FAM91A2P","pseudogene","no",3.81,0,0,0.006,57,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:149177212|149180296","exon_intersect_chr1:149646599|149648388"]
["chr1:149201090|149261640:-","chr1:149190671|149190791:-_chr1:149197996|149198171:-_chr1:149198361|149198484:-_chr1:149201014|149201090:-_chr1:149261640|149261791:-_chr1:149266969|149267026:-","UN_AC245297.1_LS0001","AC245297.1","pseudogene","no",2.77,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:149261640|149261791","intron_intersect_chr1:149201090|149240377"]
["chr1:14924572|14943266:+","chr1:14924467|14924572:+_chr1:14943266|14943587:+","UN_KAZN_LS0201","KAZN","protein coding gene","no",1.7,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:14924572|14929800","intron_intersect_chr1:14930044|14945919"]
["chr1:149250799|149259502:+","chr1:149176041|149176250:+_chr1:149250565|149250799:+_chr1:149259502|149259609:+_chr1:149262168|149262276:+_chr1:149263838|149264816:+","UN_AC245297.1_LS0005","AC245297.1","pseudogene","no",5.68,0.03,0,0.013,127,0.001,1,"0(0)","LGG","no","TE_intersect_:149250781|chr1|149250781|149251049|AluSp:Alu:SINE|112|+","NA","exon_intersect_chr1:149250565|149251013","intron_intersect_chr1:149251013|149261640"]
["chr1:149259609|149263838:+","chr1:149176183|149176250:+_chr1:149259502|149259609:+_chr1:149263838|149264797:+","UN_AC245297.1_LS0010","AC245297.1","pseudogene","no",1.24,0,0,0.007,68,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:149251013|149261640","intron_intersect_chr1:149261791|149264252"]
["chr1:149262276|149263768:+","chr1:149176183|149176250:+_chr1:149259502|149259609:+_chr1:149262168|149262276:+_chr1:149263768|149264784:+","UN_AC245297.1_LS0014","AC245297.1","pseudogene","no",2.21,0,0,0.008,72,0,0,"0(0)","LGG","no","TE_intersect_:149261995|chr1|149261995|149262424|MLT1H:ERVL-MaLR:LTR|264|+","NA","intron_intersect_chr1:149261791|149264252","intron_intersect_chr1:149261791|149264252"]
["chr1:149384000|149390255:-","chr1:149383027|149384000:-_chr1:149390255|149390618:-","UN_AC245297.1_UP_LS0001","AC245297.1","pseudogene","no",1.33,0,0,0.015,143,0,0,"0(0)","GBM;OV;TGCT","no","NA","NA","NA","NA"]
["chr1:149473037|149474205:+","chr1:149390623|149390922:+_chr1:149430934|149431015:+_chr1:149455318|149455577:+_chr1:149463491|149463826:+_chr1:149464077|149473037:+_chr1:149474205|149476107:+_chr1:149477945|149478047:+_chr1:149478880|149479094:+_chr1:149480142|149480214:+_chr1:149480679|149480884:+_chr1:149482175|149482226:+_chr1:149486130|149486293:+_chr1:149487332|149487383:+_chr1:149488013|149488185:+_chr1:149488905|149488956:+_chr1:149489561|149489733:+_chr1:149490443|149490494:+_chr1:149491139|149491311:+_chr1:149492026|149492134:+_chr1:149492768|149492940:+_chr1:149493660|149493711:+_chr1:149494318|149494490:+_chr1:149495200|149495251:+_chr1:149495902|149496074:+_chr1:149496789|149496897:+_chr1:149497525|149497697:+_chr1:149498417|149498468:+_chr1:149499073|149499245:+_chr1:149499955|149500006:+_chr1:149500657|149500829:+_chr1:149501544|149501652:+_chr1:149502286|149502458:+_chr1:149503178|149503229:+_chr1:149503834|149504006:+_chr1:149504716|149504767:+_chr1:149505418|149505590:+_chr1:149506305|149506413:+_chr1:149507047|149507219:+_chr1:149507939|149507990:+_chr1:149508595|149508767:+_chr1:149509477|149509528:+_chr1:149510179|149510351:+_chr1:149511066|149511174:+_chr1:149511808|149511980:+_chr1:149512700|149512751:+_chr1:149513356|149513528:+_chr1:149514238|149514289:+_chr1:149514936|149515108:+_chr1:149515822|149516736:+_chr1:149517456|149517507:+_chr1:149518110|149519860:+_chr1:149520575|149520683:+_chr1:149521319|149521491:+_chr1:149522211|149522262:+_chr1:149522865|149524617:+_chr1:149525332|149526242:+_chr1:149526962|149527013:+_chr1:149527614|149529346:+_chr1:149530061|149530971:+_chr1:149531691|149531742:+_chr1:149532345|149534097:+_chr1:149534812|149535726:+_chr1:149536446|149536497:+_chr1:149537100|149538848:+_chr1:149539563|149539671:+_chr1:149540301|149540473:+_chr1:149541193|149541244:+_chr1:149541853|149542025:+_chr1:149542735|149543585:+_chr1:149544300|149544408:+_chr1:149545038|149545210:+_chr1:149545930|149545981:+_chr1:149546590|149546762:+_chr1:149547472|149548322:+_chr1:149549037|149549145:+_chr1:149549775|149549947:+_chr1:149550667|149550718:+_chr1:149551327|149551499:+_chr1:149552209|149553059:+_chr1:149553774|149553882:+_chr1:149554495|149555644:+","UN_NBPF19_LS0014","NBPF19","protein coding gene","no",2.95,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:149468030|149475641","intron_intersect_chr1:149468030|149475641"]
["chr1:149558623|149559392:+","chr1:149175255|149176250:+_chr1:149177158|149177212:+_chr1:149558568|149558623:+_chr1:149559392|149559528:+","UN_PPIAL4C_UP_LS0006","PPIAL4C","protein coding gene","no",2.79,0,0,0.012,116,0,0,"0(0)","DLBC;OV;STAD","no","NA","NA","NA","NA"]
["chr1:149756276|149811947:-","chr1:149755104|149756276:-_chr1:149811947|149812338:-","UN_AC243772.1_UP_LS0001","AC243772.1","pseudogene","no",2.65,0,0,0.009,87,0,0,"0(0)","ACC;GBM","no","NA","NA","exon_intersect_chr1:149810406|149812373","NA"]
["chr1:149834704|149834816:+","chr1:149832665|149833114:+_chr1:149834135|149834704:+_chr1:149834816|149835098:+_chr1:149835572|149835981:+_chr1:150070578|150070677:+","UN_HIST2H4A_LS0005","HIST2H4A","protein coding gene","no",2.1,0,0,0.009,82,0,0,"0(0)","LIHC;PAAD;STAD","no","NA","NA","intron_intersect_chr1:149834631|149839538","intron_intersect_chr1:149834631|149839538"]
["chr1:149835098|149835572:+","chr1:149832620|149833864:+_chr1:149834135|149835098:+_chr1:149835572|149836179:+","UN_HIST2H4A_LS0009","HIST2H4A","protein coding gene","no",1.7,0,0,0.006,60,0,0,"0(0)","LAML;STAD","no","NA","TE_intersect_:149835555|chr1|149835555|149835659|MIRc:MIR:SINE|317|+","intron_intersect_chr1:149834631|149839538","intron_intersect_chr1:149834631|149839538"]
["chr1:149835098|149839595:+","chr1:149832620|149833864:+_chr1:149834135|149835098:+_chr1:149839595|149839932:+","UN_HIST2H4A_LS0012","HIST2H4A","protein coding gene","no",0.75,0,0,0.004,38,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:149834631|149839538","exon_intersect_chr1:149839538|149841193"]
["chr1:149839202|149839595:+","chr1:149832670|149833864:+_chr1:149834135|149835098:+_chr1:149835572|149839202:+_chr1:149839595|149839935:+","UN_HIST2H4A_LS0015","HIST2H4A","protein coding gene","no",1.28,0,0,0.005,52,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr1:149834631|149839538","exon_intersect_chr1:149839538|149841193"]
["chr1:149854217|149854610:-","chr1:149854041|149854217:-_chr1:149854610|149859681:-_chr1:149859952|149861148:-","UN_HIST2H4B_LS0001","HIST2H4B","protein coding gene","no",0.66,0,0,0.006,54,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr1:149854274|149859185","exon_intersect_chr1:149852619|149854274"]
["chr1:149854217|149858718:-","chr1:149854045|149854217:-_chr1:149858718|149859681:-_chr1:149859952|149861138:-","UN_HIST2H4B_LS0003","HIST2H4B","protein coding gene","no",0.95,0,0,0.003,33,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:149854274|149859185","exon_intersect_chr1:149852619|149854274"]
["chr1:149858248|149858718:-","chr1:149834650|149839760:-_chr1:149854343|149858248:-_chr1:149858718|149861138:-","UN_HIST2H4B_LS0012","HIST2H4B","protein coding gene","no",1.99,0,0,0.005,51,0,0,"0(0)","STAD","no","NA","TE_intersect_:149858160|chr1|149858160|149858264|MIRc:MIR:SINE|317|-","intron_intersect_chr1:149854274|149859185","intron_intersect_chr1:149854274|149859185"]
["chr1:149859000|149859112:-","chr1:149854061|149854217:-_chr1:149858175|149858248:-_chr1:149858718|149859000:-_chr1:149859112|149859681:-_chr1:149859952|149861185:-","UN_HIST2H4B_LS0014","HIST2H4B","protein coding gene","no",1.46,0,0,0.008,74,0,0,"0(0)","PAAD;STAD","no","NA","NA","intron_intersect_chr1:149854274|149859185","intron_intersect_chr1:149854274|149859185"]
["chr1:149886961|149887887:-","chr1:149882337|149886961:-_chr1:149887887|149887916:-","UN_HIST2H2BE_UP_LS0001","HIST2H2BE","protein coding gene","no",3.12,0,0,0.001,12,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:149887524|149887916","NA"]
["chr1:149895721|149899478:-","chr1:149895359|149895721:-_chr1:149899478|149899586:-","UN_BOLA1_LS0004","BOLA1","protein coding gene","no",1.13,0,0,0.004,34,0,0,"0(0)","OV","no","NA","TE_intersect_:149895340|chr1|149895340|149895856|MLT2B4:ERVL:LTR|172|-","exon_intersect_chr1:149899460|149899730","intron_intersect_chr1:149888123|149899460"]
["chr1:149933530|149934191:-","chr1:149930077|149930965:-_chr1:149931260|149931379:-_chr1:149931944|149932014:-_chr1:149932264|149932330:-_chr1:149933406|149933530:-_chr1:149934191|149934326:-_chr1:149934448|149934526:-_chr1:149934986|149935128:-_chr1:149935299|149935486:-","MTMR11_LS018","MTMR11","protein coding gene","no",4.29,0.01,0,0.008,72,0.001,1,"0(0)","READ;STAD","yes","NA","NA","exon_intersect_chr1:149934183|149934326","intron_intersect_chr1:149933530|149933610"]
["chr1:150046529|150074097:-","chr1:150045626|150046529:-_chr1:150074097|150074283:-","UN_OTUD7B_UP_LS0007","OTUD7B","protein coding gene","no",1.04,0,0,0.002,22,0,0,"0(0)","GBM","no","TE_intersect_:150074010|chr1|150074010|150074317|AluSx:Alu:SINE|117|-","TE_intersect_:150046444|chr1|150046444|150046748|AluSc8:Alu:SINE|92|-","intron_intersect_chr1:150072226|150076233","NA"]
["chr1:150054634|150067483:-","chr1:150004333|150004355:-_chr1:150046866|150047945:-_chr1:150048455|150048551:-_chr1:150050482|150050579:-_chr1:150054509|150054634:-_chr1:150067483|150067603:-","UN_AC244033.2_LS0019","AC244033.2","no","no",0.95,0,0,0.005,47,0,0,"0(0)","GBM","no","NA","TE_intersect_:150054525|chr1|150054525|150054829|AluSq2:Alu:SINE|115|+","exon_intersect_chr1:150067293|150067950","intron_intersect_chr1:150054518|150054820"]
["chr1:150054643|150066958:-","chr1:150045558|150047945:-_chr1:150048455|150048551:-_chr1:150050482|150050540:-_chr1:150054509|150054643:-_chr1:150066958|150067279:-","UN_AC244033.2_LS0022","AC244033.2","no","no",1.45,0,0,0.003,30,0,0,"0(0)","GBM","no","NA","TE_intersect_:150054525|chr1|150054525|150054829|AluSq2:Alu:SINE|115|+","NA","intron_intersect_chr1:150054518|150054820"]
["chr1:150175106|150182242:-","chr1:150173176|150175106:-_chr1:150182242|150182907:-","UN_AC244033.2_UP_LS0002","AC244033.2","no","no",2.47,0,0,0.003,27,0,0,"0(0)","GBM","no","NA","TE_intersect_:150175001|chr1|150175001|150175220|MIRc:MIR:SINE|344|+","NA","NA"]
["chr1:150257328|150258080:+","chr1:150257208|150257328:+_chr1:150258080|150258183:+_chr1:150260151|150260171:+_chr1:150261459|150261638:+_chr1:150262158|150262300:+_chr1:150262525|150262620:+_chr1:150262804|150262870:+_chr1:150263042|150263199:+_chr1:150263299|150263419:+_chr1:150263659|150263679:+_chr1:150263794|150263878:+_chr1:150264593|150264891:+","CA14_LS001","CA14","protein coding gene","no",1.55,0,0,0.011,110,0,0,"0(0)","SKCM;UVM","yes","NA","NA","exon_intersect_chr1:150257159|150258183","exon_intersect_chr1:150257159|150258183"]
["chr1:150257458|150258080:+","chr1:150257222|150257458:+_chr1:150258080|150258183:+_chr1:150260151|150260171:+_chr1:150261459|150261638:+_chr1:150262158|150262300:+_chr1:150262525|150262620:+_chr1:150262804|150262870:+_chr1:150263042|150263199:+_chr1:150263299|150263419:+_chr1:150263659|150263679:+_chr1:150263794|150263878:+_chr1:150264593|150264891:+","UN_CA14_LS0001","CA14","protein coding gene","no",1.35,0,0,0.003,28,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:150257159|150258183","exon_intersect_chr1:150257159|150258183"]
["chr1:150262620|150263299:+","chr1:150257875|150258183:+_chr1:150260151|150260171:+_chr1:150261459|150261638:+_chr1:150262158|150262300:+_chr1:150262525|150262620:+_chr1:150263299|150263419:+_chr1:150263662|150263679:+_chr1:150263794|150263878:+_chr1:150264593|150264891:+","CA14_LS017","CA14","protein coding gene","no",2.68,0,0,0.002,17,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chr1:150262620|150262804","exon_intersect_chr1:150262804|150263419"]
["chr1:150268882|150268984:+","chr1:150268697|150268882:+_chr1:150268984|150269001:+","UN_C1orf54_LS0030","C1orf54","protein coding gene","no",2.73,0,0,0.002,22,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:150268698|150269303","exon_intersect_chr1:150268698|150269303"]
["chr1:150309143|150309449:-","chr1:150308981|150309143:-_chr1:150309449|150309782:-","UN_APH1A_UP_LS0007","APH1A","protein coding gene","no",1.63,0,0,0.003,33,0,0,"0(0)","OV","no","TE_intersect_:150309302|chr1|150309302|150309599|AluYj4:Alu:SINE|91|-","TE_intersect_:150308995|chr1|150308995|150309295|AluSq2:Alu:SINE|93|-","NA","NA"]
["chr1:15032|185317:-","chr1:14379|14829:-_chr1:14970|15032:-_chr1:185317|185350:-_chr1:185491|185559:-_chr1:186317|186469:-_chr1:187129|187287:-_chr1:187380|187577:-_chr1:187755|187958:-","UN_WASH7P_UP_LS0059","WASH7P","pseudogene","no",21.33,0,0,0.001,11,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:184923|185350","exon_intersect_chr1:15005|15038"]
["chr1:150472689|150473117:+","chr1:150364711|150364919:+_chr1:150417596|150417725:+_chr1:150440923|150441023:+_chr1:150443231|150443283:+_chr1:150444251|150444377:+_chr1:150446226|150446401:+_chr1:150457288|150457570:+_chr1:150460060|150460317:+_chr1:150464527|150464727:+_chr1:150470561|150471742:+_chr1:150471883|150472689:+_chr1:150473117|150476566:+","UN_RPRD2_LS0068","RPRD2","protein coding gene","no",6.18,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:150470561|150476566","exon_intersect_chr1:150470561|150476566"]
["chr1:1505191|1533926:+","chr1:1505073|1505191:+_chr1:1533926|1534685:+","UN_AL645728.1_UP_LS0575","AL645728.1","lncRNA gene","no",4.14,0,0,0.006,57,0,0,"0(0)","GBM","no","TE_intersect_:1504965|chr1|1504965|1505957|LTR13:ERVK:LTR|52|-","NA","NA","exon_intersect_chr1:1533926|1534687"]
["chr1:150537169|150538146:+","chr1:150532460|150532786:+_chr1:150535667|150537169:+_chr1:150538146|150538156:+","UN_ADAMTSL4_UP_LS0018","ADAMTSL4","protein coding gene","no",0.97,0,0,0.004,38,0,0,"0(0)","CHOL","no","NA","NA","NA","NA"]
["chr1:150641720|150642030:+","chr1:150641659|150641720:+_chr1:150642030|150642086:+_chr1:150649046|150652874:+","UN_RNU6-1042P_UP_LS0018","RNU6-1042P","small non-coding RNA gene","no",1.96,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:150641375|chr1|150641375|150641787|LTR7:ERV1:LTR|81|+","NA","NA","NA"]
["chr1:150641789|150642030:+","chr1:150641659|150641789:+_chr1:150642030|150642086:+_chr1:150642993|150643086:+_chr1:150646258|150646499:+","UN_RNU6-1042P_UP_LS0019","RNU6-1042P","small non-coding RNA gene","no",4.4,0,0,0.003,26,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:150641794|150642030:+","chr1:150641557|150641794:+_chr1:150642030|150642086:+_chr1:150642993|150643086:+_chr1:150646258|150646544:+","UN_RNU6-1042P_UP_LS0020","RNU6-1042P","small non-coding RNA gene","no",3.51,0,0,0.005,45,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:150642086|150642993:+","chr1:150641557|150641794:+_chr1:150642030|150642086:+_chr1:150642993|150643086:+_chr1:150646258|150646544:+","UN_RNU6-1042P_UP_LS0021","RNU6-1042P","small non-coding RNA gene","no",3.9,0.24,0,0.007,65,0.003,2,"0(0)","TGCT","no","NA","TE_intersect_:150642983|chr1|150642983|150643106|AluJr:Alu:SINE|130|-","NA","NA"]
["chr1:150643086|150646258:+","chr1:150641557|150641794:+_chr1:150642030|150642086:+_chr1:150642993|150643086:+_chr1:150646258|150646544:+","UN_RNU6-1042P_UP_LS0024","RNU6-1042P","small non-coding RNA gene","no",7,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:150642983|chr1|150642983|150643106|AluJr:Alu:SINE|130|-","NA","NA","exon_intersect_chr1:150646225|150648748"]
["chr1:150643086|150649046:+","chr1:150641533|150641789:+_chr1:150642030|150642086:+_chr1:150642993|150643086:+_chr1:150649046|150653142:+","UN_RNU6-1042P_UP_LS0025","RNU6-1042P","small non-coding RNA gene","no",3.46,0,0,0.002,17,0,0,"0(0)","TGCT","no","TE_intersect_:150642983|chr1|150642983|150643106|AluJr:Alu:SINE|130|-","NA","NA","intron_intersect_chr1:150648748|150661814"]
["chr1:15066865|15067229:-","chr1:15066713|15066865:-_chr1:15067229|15067448:-","UN_KAZN_LS0232","KAZN","protein coding gene","no",1.06,0,0,0.005,48,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:15065630|15068155","exon_intersect_chr1:15065630|15068155"]
["chr1:150719538|150729182:-","chr1:150698554|150698734:-_chr1:150700112|150700183:-_chr1:150703310|150703393:-_chr1:150704118|150704194:-_chr1:150704277|150704343:-_chr1:150706553|150706809:-_chr1:150708256|150708407:-_chr1:150708894|150708961:-_chr1:150711545|150711571:-_chr1:150711833|150711853:-_chr1:150714085|150714121:-_chr1:150714615|150714678:-_chr1:150717138|150717282:-_chr1:150719473|150719538:-_chr1:150729182|150729978:-","UN_GOLPH3L_UP_LS0011","GOLPH3L","protein coding gene","no",2.89,0,0,0.003,26,0,0,"0(0)","TGCT","no","TE_intersect_:150727944|chr1|150727944|150729963|SVA_F:SVA:Retroposon|71|-","NA","NA","intron_intersect_chr1:150719538|150720804"]
["chr1:150732721|151109784:-","chr1:150730196|150732721:-_chr1:151109784|151109842:-","UN_HORMAD1_UP_LS0019","HORMAD1","protein coding gene","no",56.28,0,0,0.005,44,0,0,"0(0)","ESCA","no","TE_intersect_:151109663|chr1|151109663|151109836|AluJb:Alu:SINE|170|-","TE_intersect_:150732606|chr1|150732606|150732908|AluSz6:Alu:SINE|136|-","intron_intersect_chr1:151107222|151111912","exon_intersect_chr1:150730196|150733145"]
["chr1:150813420|150820387:+","chr1:150813239|150813420:+_chr1:150820387|150822161:+","UN_ARNT_LS0005","ARNT","protein coding gene","no",1,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","TE_intersect_:150820380|chr1|150820380|150820655|AluJb:Alu:SINE|167|+","intron_intersect_chr1:150813338|150814077","intron_intersect_chr1:150818441|150823194"]
["chr1:15088597|15089887:-","chr1:15088089|15088597:-_chr1:15089887|15090624:-","UN_KAZN_LS0243","KAZN","protein coding gene","no",2.75,0,0,0.003,28,0,0,"0(0)","OV","no","TE_intersect_:15089578|chr1|15089578|15090059|MER65D:ERV1:LTR|108|-","NA","intron_intersect_chr1:15068155|15094180","intron_intersect_chr1:15068155|15094180"]
["chr1:150965599|150965657:+","chr1:150965249|150965599:+_chr1:150965657|150965963:+","UN_CERS2_LS0024","CERS2","protein coding gene","no",15.92,0.18,0,0.009,84,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:150965173|150966288","exon_intersect_chr1:150965173|150966288"]
["chr1:150966288|150966756:-","chr1:150965173|150966288:-_chr1:150966756|150966862:-_chr1:150967074|150967202:-_chr1:150967392|150967484:-_chr1:150967664|150967714:-_chr1:150967820|150967877:-_chr1:150968083|150968172:-","UN_CERS2_LS0057","CERS2","protein coding gene","no",4.09,0,0,0.009,85,0.001,1,"0(0)","HNSC;TGCT","no","NA","NA","exon_intersect_chr1:150966756|150967202","intron_intersect_chr1:150966288|150966476"]
["chr1:151088297|151093192:+","chr1:151088167|151088297:+_chr1:151093192|151093386:+_chr1:151097852|151098002:+_chr1:151103562|151103665:+","GABPB2_LS012","GABPB2","protein coding gene","no",1.43,0,0,0.004,35,0.001,1,"0(0)","STAD","yes","NA","NA","intron_intersect_chr1:151088297|151088470","exon_intersect_chr1:151093192|151093386"]
["chr1:151147254|151149965:-","chr1:151130105|151133517:-_chr1:151134401|151134445:-_chr1:151134620|151134675:-_chr1:151134798|151134875:-_chr1:151135163|151135309:-_chr1:151135591|151135764:-_chr1:151136011|151136163:-_chr1:151136448|151136579:-_chr1:151136857|151137074:-_chr1:151137711|151137799:-_chr1:151137986|151138105:-_chr1:151138316|151138406:-_chr1:151138630|151138731:-_chr1:151139425|151139481:-_chr1:151139638|151139701:-_chr1:151139976|151140090:-_chr1:151142504|151142675:-_chr1:151144385|151144434:-_chr1:151146433|151147254:-_chr1:151149965|151150201:-","UN_SEMA6C_UP_LS0002","SEMA6C","protein coding gene","no",2.87,0,0,0.007,70,0,0,"0(0)","LIHC;STAD","no","TE_intersect_:151149797|chr1|151149797|151150137|L2b:L2:LINE|321|+","NA","NA","NA"]
["chr1:151150104|151160815:-","chr1:151129828|151133517:-_chr1:151134401|151134445:-_chr1:151134620|151134675:-_chr1:151134798|151134875:-_chr1:151135163|151135309:-_chr1:151135591|151135764:-_chr1:151136011|151136163:-_chr1:151136448|151136579:-_chr1:151136857|151137074:-_chr1:151137711|151137799:-_chr1:151137986|151138105:-_chr1:151138316|151138406:-_chr1:151138630|151138731:-_chr1:151139425|151139481:-_chr1:151139638|151139701:-_chr1:151139976|151140090:-_chr1:151142504|151142675:-_chr1:151144385|151147254:-_chr1:151149965|151150104:-_chr1:151160815|151161020:-_chr1:151161736|151162100:-_chr1:151165079|151165964:-","UN_SEMA6C_UP_LS0007","SEMA6C","protein coding gene","no",3.53,0,0,0.006,56,0,0,"0(0)","ESCA","no","NA","TE_intersect_:151149797|chr1|151149797|151150137|L2b:L2:LINE|321|+","exon_intersect_chr1:151159748|151161020","NA"]
["chr1:15124373|15124461:-","chr1:15115952|15117807:-_chr1:15118327|15121059:-_chr1:15124228|15124373:-_chr1:15124461|15124528:-","UN_TMEM51-AS1_LS0018","TMEM51-AS1","lncRNA gene","no",1.79,0,0,0.003,32,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:15124373|15152291","intron_intersect_chr1:15124373|15152291"]
["chr1:15124373|15136400:-","chr1:15111815|15117807:-_chr1:15118327|15118904:-_chr1:15120972|15121059:-_chr1:15124228|15124373:-_chr1:15136400|15136434:-","UN_TMEM51-AS1_LS0019","TMEM51-AS1","lncRNA gene","no",1.66,0,0,0.001,14,0,0,"0(0)","TGCT","no","TE_intersect_:15136303|chr1|15136303|15136437|MIR3:MIR:SINE|284|+","NA","intron_intersect_chr1:15124373|15152291","intron_intersect_chr1:15124373|15152291"]
["chr1:151265605|151266376:-","chr1:151265449|151265605:-_chr1:151266376|151266433:-","UN_PSMD4_LS0020","PSMD4","protein coding gene","no",0.83,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:151266004|151266439","exon_intersect_chr1:151265244|151265609"]
["chr1:151266439|151266522:+","chr1:151254769|151254808:+_chr1:151262161|151262301:+_chr1:151263914|151264028:+_chr1:151264832|151264918:+_chr1:151265166|151265234:+_chr1:151265394|151265609:+_chr1:151266004|151266112:+_chr1:151266308|151266439:+_chr1:151266522|151266587:+_chr1:151267173|151267459:+","UN_PSMD4_LS0022","PSMD4","protein coding gene","no",52.99,0,0,0.007,68,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:151266439|151266520","exon_intersect_chr1:151266520|151266725"]
["chr1:151267339|151279356:+","chr1:151254769|151254808:+_chr1:151262161|151262301:+_chr1:151263914|151264028:+_chr1:151264832|151264918:+_chr1:151265166|151265234:+_chr1:151265394|151265609:+_chr1:151266004|151266112:+_chr1:151266308|151266439:+_chr1:151266520|151266587:+_chr1:151267173|151267339:+_chr1:151279356|151279464:+","UN_ZNF687_UP_LS0006","ZNF687","protein coding gene","no",1.4,0,0,0.004,34,0,0,"0(0)","DLBC","no","NA","TE_intersect_:151279355|chr1|151279355|151279429|L2a:L2:LINE|243|+","exon_intersect_chr1:151267173|151267479","NA"]
["chr1:151290906|151291002:-","chr1:151290798|151290906:-_chr1:151291002|151291165:-","UN_ZNF687_LS0099","ZNF687","protein coding gene","no",1.21,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:151290695|151292180","exon_intersect_chr1:151290695|151292180"]
["chr1:151540426|151563904:+","chr1:151540334|151540426:+_chr1:151563904|151563990:+_chr1:151564525|151564614:+_chr1:151566163|151566228:+_chr1:151569657|151569770:+_chr1:151574270|151574398:+_chr1:151574911|151575005:+_chr1:151578721|151578826:+_chr1:151579649|151579732:+_chr1:151580942|151581042:+_chr1:151581644|151583583:+","UN_TUFT1_LS0006","TUFT1","protein coding gene","no",3.12,0,0,0.007,71,0,0,"0(0)","STAD;TGCT","no","NA","NA","intron_intersect_chr1:151540426|151540516","exon_intersect_chr1:151563904|151563990"]
["chr1:15155145|15210490:+","chr1:15154921|15155145:+_chr1:15210490|15210562:+_chr1:15214895|15220339:+","UN_TMEM51_LS0009","TMEM51","protein coding gene","no",2.93,0,0,0.001,12,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:15153954|15164344","exon_intersect_chr1:15210490|15210562"]
["chr1:151600452|151601764:+","chr1:151599560|151600452:+_chr1:151601764|151602095:+","UN_SNX27_UP_LS0006","SNX27","protein coding gene","no",2.97,0,0,0.006,56,0,0,"0(0)","ESCA;TGCT","no","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","TE_intersect_:151601718|chr1|151601718|151601934|MLT1L:ERVL-MaLR:LTR|261|+","NA","NA"]
["chr1:151600496|151600799:+","chr1:151599555|151600496:+_chr1:151600799|151602079:+_chr1:151605027|151605086:+_chr1:151607291|151607909:+","UN_SNX27_UP_LS0010","SNX27","protein coding gene","no",2.57,0,0,0.002,16,0,0,"0(0)","ESCA","no","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","NA","NA"]
["chr1:151600542|151600746:+","chr1:151599561|151600179:+_chr1:151600296|151600542:+_chr1:151600746|151601363:+","UN_SNX27_UP_LS0013","SNX27","protein coding gene","no",1.12,0,0,0.001,14,0,0,"0(0)","ESCA","no","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","NA","NA"]
["chr1:151600668|151600894:+","chr1:151599548|151600668:+_chr1:151600894|151601408:+","UN_SNX27_UP_LS0020","SNX27","protein coding gene","no",2.04,0,0,0.005,46,0,0,"0(0)","ESCA;OV","no","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","NA","NA"]
["chr1:151600749|151600799:+","chr1:151599559|151600749:+_chr1:151600799|151601710:+","UN_SNX27_UP_LS0022","SNX27","protein coding gene","no",3.39,0,0,0.003,25,0,0,"0(0)","TGCT","no","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","NA","NA"]
["chr1:151600893|151601065:+","chr1:151599597|151600496:+_chr1:151600799|151600893:+_chr1:151601065|151601399:+","UN_SNX27_UP_LS0029","SNX27","protein coding gene","no",3.23,0,0,0.002,15,0,0,"0(0)","ESCA","no","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","TE_intersect_:151599609|chr1|151599609|151601739|SVA_E:SVA:Retroposon|82|+","NA","NA"]
["chr1:151602079|151605027:+","chr1:151599555|151600496:+_chr1:151600799|151602079:+_chr1:151605027|151605086:+_chr1:151607291|151607909:+","UN_SNX27_UP_LS0031","SNX27","protein coding gene","no",1.75,0,0,0.006,60,0,0,"0(0)","ESCA;TGCT","no","TE_intersect_:151601934|chr1|151601934|151602231|AluJo:Alu:SINE|141|+","TE_intersect_:151605021|chr1|151605021|151605103|MIR1_Amn:MIR:SINE|257|+","NA","NA"]
["chr1:151605086|151607291:+","chr1:151599555|151600496:+_chr1:151600799|151602079:+_chr1:151605027|151605086:+_chr1:151607291|151607909:+","UN_SNX27_UP_LS0033","SNX27","protein coding gene","no",1.66,0,0,0.005,45,0,0,"0(0)","ESCA;TGCT","no","TE_intersect_:151605021|chr1|151605021|151605103|MIR1_Amn:MIR:SINE|257|+","TE_intersect_:151607227|chr1|151607227|151607942|L2c:L2:LINE|354|+","NA","NA"]
["chr1:151651582|151658235:+","chr1:151649869|151651582:+_chr1:151658235|151658427:+_chr1:151660798|151660862:+_chr1:151662166|151662270:+_chr1:151665933|151666011:+_chr1:151668472|151668635:+_chr1:151683356|151683445:+_chr1:151692435|151692584:+_chr1:151692911|151693039:+_chr1:151693424|151693483:+_chr1:151694370|151699074:+","UN_SNX27_LS0023","SNX27","protein coding gene","no",1.97,0,0,0.003,30,0,0,"0(0)","TGCT","no","TE_intersect_:151650595|chr1|151650595|151652242|SVA_F:SVA:Retroposon|30|-","NA","intron_intersect_chr1:151639119|151658235","exon_intersect_chr1:151658235|151658427"]
["chr1:151703448|151704130:-","chr1:151702613|151703448:-_chr1:151704130|151705168:-_chr1:151705822|151705965:-_chr1:151706224|151706358:-_chr1:151706669|151706734:-_chr1:151707145|151707294:-_chr1:151707507|151707648:-_chr1:151707792|151707935:-_chr1:151708998|151709077:-_chr1:151709220|151709348:-_chr1:151709743|151709791:-_chr1:151714594|151714676:-_chr1:151715876|151716052:-","UN_CELF3_LS0002","CELF3","protein coding gene","no",10.14,0,0,0.012,114,0,0,"0(0)","PAAD;PCPG","no","NA","NA","intron_intersect_chr1:151703448|151705031","intron_intersect_chr1:151703448|151705031"]
["chr1:151704191|151705031:-","chr1:151702613|151703448:-_chr1:151704130|151704191:-_chr1:151705031|151705168:-_chr1:151705822|151705965:-_chr1:151706224|151706358:-_chr1:151706669|151706734:-_chr1:151707507|151707648:-_chr1:151707792|151707935:-_chr1:151708998|151709077:-_chr1:151709220|151709345:-_chr1:151709743|151709791:-_chr1:151714594|151714676:-_chr1:151715619|151715981:-_chr1:151716755|151716783:-","UN_CELF3_LS0003","CELF3","protein coding gene","no",12.08,0,0,0.006,53,0,0,"0(0)","PAAD;PCPG","no","NA","NA","exon_intersect_chr1:151705031|151705168","intron_intersect_chr1:151703448|151705031"]
["chr1:151716310|151719596:+","chr1:151716152|151716310:+_chr1:151719596|151719688:+_chr1:151722086|151722162:+_chr1:151727575|151727621:+_chr1:151728766|151728893:+_chr1:151729488|151729616:+","UN_RIIAD1_LS0007","RIIAD1","protein coding gene","no",3.36,0,0,0.014,132,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:151715619|151716814","exon_intersect_chr1:151719596|151719688"]
["chr1:151716583|151716755:-","chr1:151707509|151707648:-_chr1:151707792|151707935:-_chr1:151708998|151709077:-_chr1:151709220|151709348:-_chr1:151709743|151709791:-_chr1:151710696|151710881:-_chr1:151714594|151714676:-_chr1:151715876|151716583:-_chr1:151716755|151716783:-","UN_RIIAD1_LS0008","RIIAD1","protein coding gene","no",4.79,0,0,0.007,70,0,0,"0(0)","LGG;PCPG","no","NA","NA","exon_intersect_chr1:151715619|151716814","exon_intersect_chr1:151715619|151716814"]
["chr1:151761548|151761962:-","chr1:151759884|151760181:-_chr1:151760816|151760899:-_chr1:151761451|151761548:-_chr1:151761962|151762010:-_chr1:151762105|151762155:-_chr1:151762376|151762500:-_chr1:151762990|151763146:-_chr1:151763327|151763484:-","UN_MRPL9_LS0010","MRPL9","protein coding gene","no",7.67,0,0,0.002,23,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:151761962|151762025","exon_intersect_chr1:151761451|151761552"]
["chr1:151769523|151770172:+","chr1:151769383|151769523:+_chr1:151770172|151770257:+_chr1:151771077|151771321:+","UN_OAZ3_LS0014","OAZ3","protein coding gene","no",3.47,0,0,0.015,145,0,0,"0(0)","CESC;TGCT;THCA","no","TE_intersect_:151768666|chr1|151768666|151770134|SVA_C:SVA:Retroposon|44|-","NA","intron_intersect_chr1:151769501|151770107","exon_intersect_chr1:151770107|151770562"]
["chr1:151791245|151793205:+","chr1:151790842|151791245:+_chr1:151793205|151793322:+_chr1:151793815|151794402:+","UN_TDRKH-AS1_LS0004","TDRKH-AS1","lncRNA gene","no",1.7,0,0,0.009,86,0,0,"0(0)","GBM;OV","no","NA","TE_intersect_:151793178|chr1|151793178|151793483|AluSz6:Alu:SINE|131|-","exon_intersect_chr1:151790810|151791416","intron_intersect_chr1:151791545|151793815"]
["chr1:151793322|151793815:+","chr1:151790842|151791245:+_chr1:151793205|151793322:+_chr1:151793815|151794402:+","UN_TDRKH-AS1_LS0007","TDRKH-AS1","lncRNA gene","no",2.5,0,0,0.006,58,0,0,"0(0)","GBM;OV","no","TE_intersect_:151793178|chr1|151793178|151793483|AluSz6:Alu:SINE|131|-","TE_intersect_:151793793|chr1|151793793|151794092|AluSc8:Alu:SINE|63|-","intron_intersect_chr1:151791545|151793815","exon_intersect_chr1:151793815|151794402"]
["chr1:151848292|151848387:-","chr1:151847282|151847414:-_chr1:151847738|151847862:-_chr1:151848182|151848292:-_chr1:151848387|151848511:-","UN_THEM5_LS0004","THEM5","protein coding gene","no",2.16,0,0,0.002,19,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:151848292|151850233","intron_intersect_chr1:151848292|151850233"]
["chr1:151850492|151856140:+","chr1:151841877|151842031:+_chr1:151844045|151844242:+_chr1:151850233|151850492:+_chr1:151856140|151856355:+","UN_AL450992.3_UP_LS0014","AL450992.3","lncRNA gene","no",4.32,0,0,0.005,50,0,0,"0(0)","CESC","no","TE_intersect_:151850396|chr1|151850396|151850544|MIRc:MIR:SINE|304|+","TE_intersect_:151855802|chr1|151855802|151856389|LTR61:ERV1:LTR|104|+","intron_intersect_chr1:151850385|151851053","NA"]
["chr1:151908253|151953482:+","chr1:151908091|151908253:+_chr1:151953482|151954103:+","UN_AL450992.1_UP_LS0001","AL450992.1","lncRNA gene","no",2.15,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:151907954|chr1|151907954|151908832|MER61-int:ERV1:LTR|137|+","TE_intersect_:151953298|chr1|151953298|151953918|LTR66:ERVL:LTR|61|-","intron_intersect_chr1:151895194|151909360","NA"]
["chr1:151946887|152032602:+","chr1:151946876|151946887:+_chr1:152032602|152032820:+_chr1:152033645|152033799:+","UN_SPTLC1P4_UP_LS0002","SPTLC1P4","pseudogene","no",22.39,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","NA","exon_intersect_chr1:152032506|152032823"]
["chr1:151982988|151983138:+","chr1:151982915|151982988:+_chr1:151983138|151983319:+","UN_S100A10_LS0004","S100A10","protein coding gene","no",4.62,0,0,0.003,24,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:151982915|151983324","exon_intersect_chr1:151982915|151983324"]
["chr1:151983222|151983283:+","chr1:151983055|151983222:+_chr1:151983283|151984076:+","UN_S100A10_LS0017","S100A10","protein coding gene","no",5.88,0,0,0.002,19,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:151982915|151983324","exon_intersect_chr1:151982915|151983324"]
["chr1:151986261|151993752:+","chr1:151983083|151983282:+_chr1:151986141|151986261:+_chr1:151993752|151993844:+","UN_S100A10_LS0032","S100A10","protein coding gene","no",7.15,0,0,0.005,49,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:151986251|151992523","exon_intersect_chr1:151993752|151994390"]
["chr1:151993791|152016046:-","chr1:151982918|151983324:-_chr1:151986099|151986251:-_chr1:151993752|151993791:-_chr1:152016046|152016070:-","UN_KRT8P28_UP_LS0005","KRT8P28","pseudogene","no",8.93,0,0,0.004,34,0,0,"0(0)","READ","no","NA","NA","exon_intersect_chr1:152016006|152016075","exon_intersect_chr1:151993752|151994390"]
["chr1:152032548|152032624:+","chr1:152032499|152032548:+_chr1:152032624|152032820:+_chr1:152033645|152033809:+","UN_S100A11_LS0004","S100A11","protein coding gene","yes",7.79,0,0,0.003,32,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:152032506|152032823","exon_intersect_chr1:152032506|152032823"]
["chr1:152032643|152033682:+","chr1:152032532|152032643:+_chr1:152033682|152033781:+","UN_S100A11_LS0030","S100A11","protein coding gene","yes",12.37,0,0,0.006,57,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:152032506|152032823","exon_intersect_chr1:152033648|152033800"]
["chr1:152624083|152626623:-","chr1:152622605|152623124:-_chr1:152623753|152624083:-_chr1:152626623|152626835:-","UN_LCE3A_UP_LS0003","LCE3A","protein coding gene","no",4.39,0,0,0.011,108,0,0,"0(0)","ESCA;HNSC;LUSC","no","NA","NA","NA","NA"]
["chr1:152933514|152935476:+","chr1:152933294|152933514:+_chr1:152935476|152935612:+_chr1:152935718|152936382:+_chr1:152948537|152948988:+","UN_LINC01527_LS0006","LINC01527","lncRNA gene","no",1.49,0,0,0.003,31,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:152931811|152948986","intron_intersect_chr1:152931811|152948986"]
["chr1:15297785|15305316:-","chr1:15297619|15297785:-_chr1:15305316|15305581:-","UN_FHAD1_LS0019","FHAD1","protein coding gene","no",2.68,0,0,0.007,64,0,0,"0(0)","SARC","no","TE_intersect_:15305161|chr1|15305161|15305389|MIR:MIR:SINE|263|-","TE_intersect_:15297577|chr1|15297577|15297791|MLT1H:ERVL-MaLR:LTR|220|-","intron_intersect_chr1:15301441|15305761","intron_intersect_chr1:15296793|15301205"]
["chr1:152985290|153032406:+","chr1:152984063|152984125:+_chr1:152985212|152985290:+_chr1:153032406|153032901:+","UN_AL161636.1_UP_LS0004","AL161636.1","lncRNA gene","no",53.97,0,0,0.003,29,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:152985231|152985500","exon_intersect_chr1:153032327|153032900"]
["chr1:153040059|153112447:+","chr1:153039705|153040059:+_chr1:153112447|153112594:+_chr1:153140571|153140712:+_chr1:153150035|153150138:+","UN_AL161636.1_UP_LS0067","AL161636.1","lncRNA gene","no",173.32,0,0,0.002,16,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:153039725|153040365","exon_intersect_chr1:153112114|153112752"]
["chr1:153040365|153087762:-","chr1:153040065|153040365:-_chr1:153087762|153087943:-","UN_RF00322_UP_LS0018","RF00322","small non-coding RNA gene","no",2.11,0,0,0.002,15,0,0,"0(0)","MESO","no","TE_intersect_:153087299|chr1|153087299|153088293|L1PA13:L1:LINE|139|+","NA","NA","intron_intersect_chr1:153040365|153040667"]
["chr1:153056754|153087762:-","chr1:153056120|153056754:-_chr1:153087762|153087923:-","UN_SPRR2D_UP_LS0012","SPRR2D","protein coding gene","no",1.91,0,0,0.003,28,0,0,"0(0)","ACC;MESO","no","TE_intersect_:153087299|chr1|153087299|153088293|L1PA13:L1:LINE|139|+","NA","NA","intron_intersect_chr1:153056754|153057471"]
["chr1:153070826|153093613:+","chr1:153039722|153039784:+_chr1:153039806|153040287:+_chr1:153056449|153056623:+_chr1:153070701|153070826:+_chr1:153093613|153093740:+_chr1:153094494|153094512:+_chr1:153112637|153112742:+_chr1:153141418|153141531:+","UN_AL161636.1_UP_LS0247","AL161636.1","lncRNA gene","no",60.92,0,0,0.001,11,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:153070224|153070840","exon_intersect_chr1:153093135|153093770"]
["chr1:153093567|153112465:+","chr1:153093192|153093567:+_chr1:153112465|153112594:+_chr1:153140571|153140670:+","UN_AL161636.1_UP_LS0254","AL161636.1","lncRNA gene","no",13.9,0,0,0.005,45,0,0,"0(0)","HNSC","no","NA","NA","exon_intersect_chr1:153093135|153093770","exon_intersect_chr1:153112114|153112752"]
["chr1:153093708|153140667:+","chr1:153039709|153039805:+_chr1:153056144|153056448:+_chr1:153070553|153070664:+_chr1:153093577|153093708:+_chr1:153140667|153140766:+","UN_AL161636.1_UP_LS0288","AL161636.1","lncRNA gene","no",118.44,0,0,0.002,18,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:153093135|153093770","exon_intersect_chr1:153140491|153140709"]
["chr1:153164444|153169206:-","chr1:153149647|153150131:-_chr1:153164345|153164444:-_chr1:153169206|153169239:-","UN_SPRR2G_UP_LS0002","SPRR2G","protein coding gene","no",1.39,0,0,0.003,33,0,0,"0(0)","LUSC","no","TE_intersect_:153168975|chr1|153168975|153169282|MER72:ERV1:LTR|169|+","NA","NA","NA"]
["chr1:153164444|153193879:-","chr1:153149532|153150131:-_chr1:153164345|153164444:-_chr1:153193879|153194178:-","UN_SPRR2G_UP_LS0007","SPRR2G","protein coding gene","no",3.27,0,0,0.001,11,0,0,"0(0)","MESO","no","NA","NA","NA","NA"]
["chr1:153360688|153360842:-","chr1:153357756|153357890:-_chr1:153358267|153358427:-_chr1:153360638|153360688:-_chr1:153360842|153361027:-","UN_S100A9_LS0019","S100A9","protein coding gene","no",20.11,0,0,0.001,12,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:153360644|153361027","exon_intersect_chr1:153360644|153361027"]
["chr1:153418233|153458877:+","chr1:153416524|153416563:+_chr1:153418066|153418233:+_chr1:153458877|153459820:+","UN_BX470102.1_UP_LS0004","BX470102.1","lncRNA gene","no",2.58,0,0,0.003,26,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:153418223|153419145","exon_intersect_chr1:153458873|153459030"]
["chr1:153459030|153474290:-","chr1:153457744|153457970:-_chr1:153458873|153459030:-_chr1:153474290|153474404:-","UN_S100A7L2_UP_LS0004","S100A7L2","protein coding gene","no",11.52,0,0,0.002,17,0,0,"0(0)","ACC","no","NA","NA","NA","intron_intersect_chr1:153459030|153459818"]
["chr1:153535375|153535789:-","chr1:153534714|153534830:-_chr1:153535202|153535375:-_chr1:153535789|153535933:-_chr1:153536117|153536215:-","UN_S100A6_LS0044","S100A6","protein coding gene","no",18.09,0,0,0.001,13,0,0,"0(0)","KICH","no","NA","NA","exon_intersect_chr1:153535789|153536244","intron_intersect_chr1:153535375|153535789"]
["chr1:153537436|153538613:-","chr1:153534575|153534830:-_chr1:153535202|153535360:-_chr1:153535949|153537436:-_chr1:153538613|153539394:-","UN_S100A5_LS0001","S100A5","protein coding gene","no",1.25,0.01,0,0.002,23,0.001,1,"0(0)","OV","no","NA","NA","intron_intersect_chr1:153537436|153540054","intron_intersect_chr1:153537436|153540054"]
["chr1:153543406|153561425:+","chr1:153543390|153543406:+_chr1:153561425|153563416:+","UN_S100A1_UP_LS0025","S100A1","protein coding gene","no",8.79,0,0,0.005,51,0,0,"0(0)","HNSC","no","NA","NA","NA","exon_intersect_chr1:153561108|153561591"]
["chr1:153548490|153549367:-","chr1:153547329|153547846:-_chr1:153548345|153548490:-_chr1:153549367|153549413:-","UN_S100A3_LS0002","S100A3","protein coding gene","no",2,0,0,0.013,121,0,0,"0(0)","GBM;STAD","no","NA","NA","exon_intersect_chr1:153549181|153549372","intron_intersect_chr1:153548490|153549028"]
["chr1:15355767|15385395:-","chr1:15355428|15355767:-_chr1:15385395|15385604:-_chr1:15388362|15388569:-","UN_FHAD1_LS0064","FHAD1","protein coding gene","no",3.24,0,0,0.003,26,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr1:153575296|153628427:+","chr1:153574665|153575296:+_chr1:153628427|153628496:+_chr1:153630509|153630662:+_chr1:153631698|153631804:+","UN_CHTOP_UP_LS0004","CHTOP","protein coding gene","no",4.18,0,0,0.009,85,0,0,"0(0)","HNSC","no","TE_intersect_:153574459|chr1|153574459|153575981|SVA_C:SVA:Retroposon|39|+","NA","NA","exon_intersect_chr1:153628384|153630662"]
["chr1:153583057|153588705:+","chr1:153582224|153583057:+_chr1:153588705|153589510:+","UN_S100A1_UP_LS0045","S100A1","protein coding gene","no",4.01,0,0,0.012,112,0,0,"0(0)","OV;TGCT","no","TE_intersect_:153582338|chr1|153582338|153583909|SVA_A:SVA:Retroposon|62|+","NA","NA","NA"]
["chr1:153607024|153607207:+","chr1:153606320|153607024:+_chr1:153607207|153607414:+_chr1:153607516|153607687:+","UN_S100A16_LS0007","S100A16","protein coding gene","no",2.68,0.04,0,0.003,33,0.001,1,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:153606886|153607718","exon_intersect_chr1:153606886|153607718"]
["chr1:153607148|153607207:+","chr1:153606944|153607148:+_chr1:153607207|153607326:+","UN_S100A16_LS0016","S100A16","protein coding gene","no",7.97,0,0,0.007,68,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:153606886|153607718","exon_intersect_chr1:153606886|153607718"]
["chr1:153662325|153662347:+","chr1:153658699|153658886:+_chr1:153659138|153659184:+_chr1:153659448|153659566:+_chr1:153661200|153662325:+_chr1:153662347|153662700:+","UN_ILF2_LS0009","ILF2","protein coding gene","no",1.92,0,0,0.002,19,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:153661788|153662556","exon_intersect_chr1:153661788|153662556"]
["chr1:153693666|153693785:-","chr1:153693338|153693666:-_chr1:153693785|153693992:-","UN_NPR1_LS0032","NPR1","protein coding gene","no",3.43,0,0,0.002,19,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153693106|153693992","exon_intersect_chr1:153693106|153693992"]
["chr1:153693666|153693859:-","chr1:153693350|153693666:-_chr1:153693859|153693991:-","UN_NPR1_LS0033","NPR1","protein coding gene","no",3.82,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153693106|153693992","exon_intersect_chr1:153693106|153693992"]
["chr1:153778885|153779096:+","chr1:153776600|153776727:+_chr1:153777062|153777220:+_chr1:153777761|153777885:+_chr1:153778161|153778355:+_chr1:153778463|153778553:+_chr1:153778687|153778885:+_chr1:153779096|153779211:+_chr1:153779343|153779473:+_chr1:153779826|153780124:+","UN_SLC27A3_LS0028","SLC27A3","protein coding gene","no",4,0.01,0,0.003,32,0.001,1,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:153777062|153780157","exon_intersect_chr1:153777062|153780157"]
["chr1:153928770|153934749:+","chr1:153923379|153923962:+_chr1:153928635|153928770:+_chr1:153934749|153935832:+","AL358472.5_LS003","AL358472.5","lncRNA gene","no",1.29,0,0,0.009,82,0,0,"0(0)","OV","yes","NA","NA","NA","intron_intersect_chr1:153934302|153934760"]
["chr1:153945283|153946297:-","chr1:153929421|153930442:-_chr1:153930539|153930603:-_chr1:153930692|153930857:-_chr1:153930947|153931064:-_chr1:153932204|153932440:-_chr1:153932642|153932777:-_chr1:153932861|153933030:-_chr1:153933197|153933319:-_chr1:153933483|153933871:-_chr1:153934135|153934302:-_chr1:153934760|153934964:-_chr1:153936060|153936188:-_chr1:153936542|153936748:-_chr1:153937488|153937614:-_chr1:153937724|153937863:-_chr1:153938900|153939045:-_chr1:153939589|153939804:-_chr1:153940156|153940256:-_chr1:153940431|153940606:-_chr1:153940904|153941048:-_chr1:153941231|153941289:-_chr1:153941374|153941440:-_chr1:153941869|153942113:-_chr1:153942187|153942356:-_chr1:153942556|153942625:-_chr1:153942878|153943130:-_chr1:153944058|153944397:-_chr1:153945135|153945283:-_chr1:153946297|153946527:-","UN_DENND4B_LS0044","DENND4B","protein coding gene","no",0.36,0,0,0.003,29,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:153945269|153946301","intron_intersect_chr1:153945269|153946301"]
["chr1:153955166|153957764:-","chr1:153952156|153952262:-_chr1:153952397|153952446:-_chr1:153952571|153952650:-_chr1:153952805|153952834:-_chr1:153953266|153953369:-_chr1:153953538|153953606:-_chr1:153954255|153954316:-_chr1:153954873|153954989:-_chr1:153955065|153955166:-_chr1:153957764|153958123:-","UN_CRTC2_LS0063","CRTC2","protein coding gene","no",1.05,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:153955166|153958061","intron_intersect_chr1:153955166|153958061"]
["chr1:153959596|153959645:+","chr1:153959238|153959596:+_chr1:153959645|153960001:+","UN_AL358472.7_LS0023","AL358472.7","protein coding gene","no",10.29,0,0,0.005,46,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153959099|153960754","exon_intersect_chr1:153959099|153960754"]
["chr1:153959724|153959826:+","chr1:153959682|153959724:+_chr1:153959826|153960118:+_chr1:153960200|153960410:+","UN_AL358472.7_LS0032","AL358472.7","protein coding gene","no",2.59,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153959099|153960754","exon_intersect_chr1:153959099|153960754"]
["chr1:153959832|153959945:+","chr1:153959410|153959596:+_chr1:153959645|153959832:+_chr1:153959945|153960118:+_chr1:153960200|153960386:+","UN_AL358472.7_LS0042","AL358472.7","protein coding gene","no",1.61,0,0,0.008,73,0,0,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chr1:153959099|153960754","exon_intersect_chr1:153959099|153960754"]
["chr1:153960542|153962233:+","chr1:153960059|153960118:+_chr1:153960200|153960542:+_chr1:153962233|153962336:+","UN_AL358472.7_LS0077","AL358472.7","protein coding gene","no",3.08,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153959099|153960754","exon_intersect_chr1:153962220|153962350"]
["chr1:153975905|153976976:-","chr1:153974512|153974835:-_chr1:153975826|153975905:-_chr1:153976976|153977013:-_chr1:153977170|153977626:-","UN_AL358472.6_LS0001","AL358472.6","protein coding gene","no",33.81,0,0,0.005,52,0,0,"0(0)","READ","no","NA","NA","exon_intersect_chr1:153976693|153977013","intron_intersect_chr1:153975905|153976693"]
["chr1:153977313|153977364:+","chr1:153977170|153977313:+_chr1:153977364|153977569:+","UN_AL358472.6_LS0034","AL358472.6","protein coding gene","no",3.23,0.08,0,0.004,36,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153977170|153977688","exon_intersect_chr1:153977170|153977688"]
["chr1:153977313|153977379:+","chr1:153977176|153977313:+_chr1:153977379|153977530:+","UN_AL358472.6_LS0035","AL358472.6","protein coding gene","no",3.46,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153977170|153977688","exon_intersect_chr1:153977170|153977688"]
["chr1:153977327|153977404:+","chr1:153960513|153960651:+_chr1:153977208|153977327:+_chr1:153977404|153977532:+","UN_AL358472.6_LS0037","AL358472.6","protein coding gene","no",3.46,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:153977170|153977688","exon_intersect_chr1:153977170|153977688"]
["chr1:154157151|154157588:+","chr1:154156943|154157151:+_chr1:154157588|154157630:+","UN_TPM3_LS0035","TPM3","protein coding gene","no",8.78,0,0,0.006,53,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:154155304|154157721","exon_intersect_chr1:154155304|154157721"]
["chr1:154157430|154183030:+","chr1:154156646|154156859:+_chr1:154157189|154157430:+_chr1:154183030|154183205:+","UN_TPM3_LS0061","TPM3","protein coding gene","no",3.38,0,0,0.006,53,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr1:154155304|154157721","exon_intersect_chr1:154182988|154183249"]
["chr1:154157653|154170407:+","chr1:154157426|154157653:+_chr1:154170407|154170462:+","UN_TPM3_LS0083","TPM3","protein coding gene","no",5.69,0,0,0.01,93,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr1:154155304|154157721","exon_intersect_chr1:154169652|154170469"]
["chr1:154221125|154225084:+","chr1:154220967|154221125:+_chr1:154225084|154225213:+_chr1:154227282|154227359:+_chr1:154228615|154228725:+_chr1:154234591|154234759:+_chr1:154235196|154235291:+_chr1:154236566|154236611:+_chr1:154237024|154237136:+_chr1:154241513|154241565:+_chr1:154243217|154243302:+_chr1:154246204|154246375:+_chr1:154249239|154249437:+_chr1:154251041|154251318:+_chr1:154251481|154251653:+_chr1:154253900|154254089:+_chr1:154254836|154254890:+_chr1:154255152|154255326:+_chr1:154255683|154255755:+_chr1:154257063|154257258:+_chr1:154257346|154257434:+_chr1:154258977|154259030:+_chr1:154259948|154260029:+_chr1:154260892|154261020:+","UN_UBAP2L_LS0009","UBAP2L","protein coding gene","no",5.62,0,0,0.008,81,0,0,"0(0)","ESCA;OV","no","NA","NA","intron_intersect_chr1:154221040|154221328","exon_intersect_chr1:154225082|154225213"]
["chr1:15426018|15428593:+","chr1:15410110|15410279:+_chr1:15425871|15426018:+_chr1:15428593|15430343:+","UN_EFHD2_LS0008","EFHD2","protein coding gene","no",19.94,0.09,0,0.019,178,0.001,1,"0(0)","ESCA;OV","no","NA","NA","intron_intersect_chr1:15426018|15427150","exon_intersect_chr1:15428593|15430343"]
["chr1:154269412|154270683:+","chr1:154257071|154257258:+_chr1:154257346|154257434:+_chr1:154258977|154259030:+_chr1:154259948|154260029:+_chr1:154260892|154261109:+_chr1:154261592|154261697:+_chr1:154266501|154266568:+_chr1:154268760|154268954:+_chr1:154269362|154269412:+_chr1:154270683|154270852:+","UN_UBAP2L_LS0099","UBAP2L","protein coding gene","no",3.83,0,0,0.002,21,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:154268757|154269695","exon_intersect_chr1:154270200|154270853"]
["chr1:154273933|154274496:-","chr1:154273780|154273933:-_chr1:154274496|154274626:-","UN_HAX1_LS0025","HAX1","protein coding gene","yes",0.14,0,0,0.004,37,0,0,"0(0)","ESCA","no","TE_intersect_:154274262|chr1|154274262|154274546|AluSx1:Alu:SINE|130|-","NA","intron_intersect_chr1:154273961|154274950","exon_intersect_chr1:154272868|154273961"]
["chr1:154287702|154288138:+","chr1:154286753|154287702:+_chr1:154288138|154289284:+","UN_RF00273_UP_LS0006","RF00273","small non-coding RNA gene","no",5.4,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:154286899|chr1|154286899|154288428|SVA_D:SVA:Retroposon|34|+","TE_intersect_:154286899|chr1|154286899|154288428|SVA_D:SVA:Retroposon|34|+","NA","NA"]
["chr1:154287830|154288138:+","chr1:154286753|154287830:+_chr1:154288138|154288601:+","UN_RF00273_UP_LS0007","RF00273","small non-coding RNA gene","no",0.98,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:154286899|chr1|154286899|154288428|SVA_D:SVA:Retroposon|34|+","TE_intersect_:154286899|chr1|154286899|154288428|SVA_D:SVA:Retroposon|34|+","NA","NA"]
["chr1:154287867|154288138:+","chr1:154286883|154287867:+_chr1:154288138|154288410:+","UN_RF00273_UP_LS0008","RF00273","small non-coding RNA gene","no",1.14,0,0,0.003,29,0,0,"0(0)","TGCT","no","TE_intersect_:154286899|chr1|154286899|154288428|SVA_D:SVA:Retroposon|34|+","TE_intersect_:154286899|chr1|154286899|154288428|SVA_D:SVA:Retroposon|34|+","NA","NA"]
["chr1:154334265|154334483:+","chr1:154325636|154325702:+_chr1:154328105|154328172:+_chr1:154330396|154330454:+_chr1:154330815|154330928:+_chr1:154331048|154331146:+_chr1:154331444|154331505:+_chr1:154331606|154331678:+_chr1:154331954|154332024:+_chr1:154332618|154332697:+_chr1:154334107|154334265:+_chr1:154334483|154334591:+_chr1:154337348|154337544:+_chr1:154340854|154341062:+_chr1:154342480|154342523:+_chr1:154342796|154342961:+_chr1:154343113|154343301:+_chr1:154343453|154343568:+_chr1:154343893|154344057:+_chr1:154344143|154344254:+_chr1:154344395|154344500:+_chr1:154344641|154344785:+_chr1:154344971|154345154:+_chr1:154345322|154345545:+_chr1:154345800|154345883:+_chr1:154346231|154346476:+_chr1:154346620|154346758:+_chr1:154348408|154348538:+_chr1:154348840|154351307:+","UN_ATP8B2_LS0015","ATP8B2","protein coding gene","no",5.58,0,0,0.002,16,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr1:154334265|154334503","intron_intersect_chr1:154334265|154334503"]
["chr1:1545002|1561940:-","chr1:1541674|1542167:-_chr1:1543869|1543987:-_chr1:1544863|1545002:-_chr1:1561940|1562189:-","SSU72_LS003","SSU72","protein coding gene","no",54.69,0,0,0.004,37,0,0,"0(0)","UVM","yes","NA","NA","exon_intersect_chr1:1560848|1564916","exon_intersect_chr1:1544638|1546487"]
["chr1:1545002|1561959:-","chr1:1541674|1542167:-_chr1:1543869|1543987:-_chr1:1544863|1545002:-_chr1:1561959|1564916:-_chr1:1574478|1574584:-","SSU72_LS004","SSU72","protein coding gene","no",38.48,0,0,0.002,21,0,0,"0(0)","UVM","yes","NA","NA","exon_intersect_chr1:1560848|1564916","exon_intersect_chr1:1544638|1546487"]
["chr1:154566182|154567424:-","chr1:154562867|154566182:-_chr1:154567424|154567729:-","UN_UBE2Q1_UP_LS0002","UBE2Q1","protein coding gene","no",2.66,0,0,0.006,61,0,0,"0(0)","LGG;PCPG","no","NA","NA","NA","NA"]
["chr1:154566182|154567550:-","chr1:154566002|154566182:-_chr1:154567550|154567730:-","UN_UBE2Q1_UP_LS0003","UBE2Q1","protein coding gene","no",4.06,0,0,0.036,349,0,0,"0(0)","GBM;LGG;PCPG","no","NA","NA","NA","NA"]
["chr1:154566182|154567559:-","chr1:154562882|154566182:-_chr1:154567559|154567724:-","UN_UBE2Q1_UP_LS0004","UBE2Q1","protein coding gene","no",3.28,0,0,0.005,50,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr1:154570367|154571325:+","chr1:154569501|154569607:+_chr1:154569792|154569836:+_chr1:154570258|154570367:+_chr1:154571325|154572161:+_chr1:154575762|154579857:+","UN_CHRNB2_LS0002","CHRNB2","protein coding gene","no",2.22,0,0,0.004,35,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:154570367|154571189","exon_intersect_chr1:154571189|154572161"]
["chr1:15461658|15482265:+","chr1:15456627|15456793:+_chr1:15457086|15457174:+_chr1:15461561|15461658:+_chr1:15482265|15482382:+_chr1:15483264|15483400:+_chr1:15485901|15486046:+_chr1:15487285|15487437:+_chr1:15491295|15491400:+","UN_DNAJC16_UP_LS0001","DNAJC16","protein coding gene","no",26.32,0.7,0,0.001,11,0.001,1,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:15461658|15462733","exon_intersect_chr1:15482265|15482393"]
["chr1:15462772|15482305:-","chr1:15462673|15462772:-_chr1:15482305|15482404:-","UN_AL031283.1_UP_LS0004","AL031283.1","lncRNA gene","no",68.49,0,0,0.001,13,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:15482265|15482393","exon_intersect_chr1:15462733|15463011"]
["chr1:15463448|15483295:-","chr1:15463308|15463448:-_chr1:15483295|15483426:-","UN_AL031283.1_UP_LS0005","AL031283.1","lncRNA gene","no",106.71,0,0,0.002,17,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:15483264|15483400","exon_intersect_chr1:15463386|15463522"]
["chr1:15466059|15485962:-","chr1:15465999|15466059:-_chr1:15485962|15486120:-","UN_CELA2B_LS0001","CELA2B","protein coding gene","no",134.79,0,0,0.001,11,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:15485861|15486046","exon_intersect_chr1:15465909|15466144"]
["chr1:154670889|154678177:-","chr1:154670794|154670889:-_chr1:154678177|154679830:-","UN_ADAR_UP_LS0001","ADAR","protein coding gene","no",8.43,0,0,0.003,33,0,0,"0(0)","GBM","no","TE_intersect_:154677854|chr1|154677854|154679312|LTR12C:ERV1:LTR|74|+","TE_intersect_:154670567|chr1|154670567|154671998|LTR12C:ERV1:LTR|74|+","NA","NA"]
["chr1:154747688|154748009:-","chr1:154747503|154747688:-_chr1:154748009|154748190:-","UN_KCNN3_LS0024","KCNN3","protein coding gene","no",2.94,0,0,0.013,123,0,0,"0(0)","GBM;PCPG;THYM","no","NA","TE_intersect_:154747462|chr1|154747462|154747689|Chap1_Mam:hAT-Charlie:DNA|304|+","intron_intersect_chr1:154737088|154771975","intron_intersect_chr1:154737088|154771975"]
["chr1:154789261|154822089:-","chr1:154788765|154789261:-_chr1:154822089|154822184:-_chr1:154859695|154859843:-","UN_KCNN3_LS0032","KCNN3","protein coding gene","no",6.23,0,0,0.004,36,0,0,"0(0)","DLBC;TGCT","no","NA","TE_intersect_:154788980|chr1|154788980|154789412|MLT1D:ERVL-MaLR:LTR|193|-","exon_intersect_chr1:154822089|154822184","intron_intersect_chr1:154772393|154822089"]
["chr1:15481195|15483264:+","chr1:15456694|15456793:+_chr1:15457086|15457174:+_chr1:15461561|15461658:+_chr1:15462733|15462861:+_chr1:15463386|15463522:+_chr1:15465999|15466144:+_chr1:15467386|15467538:+_chr1:15476457|15476545:+_chr1:15481098|15481195:+_chr1:15483264|15483400:+_chr1:15485901|15486046:+_chr1:15487285|15487437:+_chr1:15491295|15491405:+","UN_CELA2B_LS0002","CELA2B","protein coding gene","no",25.7,0,0,0.002,21,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:15481195|15481645","exon_intersect_chr1:15483264|15483400"]
["chr1:154822184|154846244:-","chr1:154707952|154708272:-_chr1:154713464|154713533:-_chr1:154714876|154715003:-_chr1:154725916|154726026:-_chr1:154733003|154733144:-_chr1:154771975|154772393:-_chr1:154822089|154822184:-_chr1:154846244|154846398:-","UN_KCNN3_LS0034","KCNN3","protein coding gene","no",1.62,0,0,0.001,12,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:154822184|154859695","intron_intersect_chr1:154822184|154859695"]
["chr1:154822184|154897067:-","chr1:154707952|154708272:-_chr1:154713464|154713533:-_chr1:154714876|154715003:-_chr1:154725916|154726026:-_chr1:154733003|154733144:-_chr1:154771975|154772393:-_chr1:154822089|154822184:-_chr1:154897067|154897190:-","UN_ADAR_UP_LS0007","ADAR","protein coding gene","no",4.3,0,0,0.006,56,0,0,"0(0)","OV","no","NA","NA","NA","intron_intersect_chr1:154822184|154859695"]
["chr1:154868252|154870958:+","chr1:154868080|154868252:+_chr1:154870958|154872645:+","UN_AL451085.1_UP_LS0011","AL451085.1","lncRNA gene","no",2.77,0,0,0.004,36,0,0,"0(0)","GBM","no","NA","TE_intersect_:154870853|chr1|154870853|154870967|MIRb:MIR:SINE|316|-","exon_intersect_chr1:154867949|154868319","NA"]
["chr1:154932415|154942576:-","chr1:154924734|154925265:-_chr1:154926354|154926483:-_chr1:154929024|154929176:-_chr1:154932352|154932415:-_chr1:154942576|154942633:-","UN_KCNN3_UP_LS0008","KCNN3","protein coding gene","no",23.65,0,0,0.001,13,0,0,"0(0)","DLBC","no","NA","NA","NA","intron_intersect_chr1:154932415|154936591"]
["chr1:154957248|154957351:+","chr1:154957068|154957248:+_chr1:154957351|154957563:+_chr1:154957672|154957864:+","UN_PYGO2_LS0001","PYGO2","protein coding gene","no",1.79,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:154957026|154959846","exon_intersect_chr1:154957026|154959846"]
["chr1:154957326|154959492:+","chr1:154957152|154957326:+_chr1:154959492|154959658:+","UN_PYGO2_LS0017","PYGO2","protein coding gene","no",1.61,0,0,0.002,21,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:154957026|154959846","exon_intersect_chr1:154957026|154959846"]
["chr1:154957373|154957427:+","chr1:154957180|154957373:+_chr1:154957427|154957563:+_chr1:154957672|154957857:+","UN_PYGO2_LS0019","PYGO2","protein coding gene","no",3.8,0,0,0.005,46,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:154957026|154959846","exon_intersect_chr1:154957026|154959846"]
["chr1:154957411|154957511:+","chr1:154957180|154957411:+_chr1:154957511|154957563:+_chr1:154957672|154957857:+","UN_PYGO2_LS0022","PYGO2","protein coding gene","no",1.7,0,0,0.007,67,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:154957026|154959846","exon_intersect_chr1:154957026|154959846"]
["chr1:154976168|154977987:+","chr1:154975539|154975608:+_chr1:154976034|154976168:+_chr1:154977987|154978114:+_chr1:154978725|154981133:+","UN_CKS1B_LS0010","CKS1B","protein coding gene","yes",1.42,0,0,0.011,103,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:154975783|154977299","exon_intersect_chr1:154977299|154978684"]
["chr1:154988698|154989580:+","chr1:154988585|154988698:+_chr1:154989580|154989707:+_chr1:154990159|154990257:+_chr1:154990339|154990528:+_chr1:154992713|154992786:+_chr1:154992902|154993111:+","FLAD1_LS011","FLAD1","protein coding gene","no",9.38,0,0,0.011,105,0,0,"0(0)","ESCA;UCEC","yes","NA","NA","exon_intersect_chr1:154987466|154989012","exon_intersect_chr1:154989560|154989707"]
["chr1:155024602|155024683:-","chr1:155018513|155018760:-_chr1:155023117|155023257:-_chr1:155023364|155023457:-_chr1:155023832|155023959:-_chr1:155024472|155024602:-_chr1:155024683|155024789:-","UN_DCST2_LS0004","DCST2","protein coding gene","no",2.01,0.02,0,0.014,133,0.001,1,"0(0)","TGCT","no","TE_intersect_:155024640|chr1|155024640|155024866|L2c:L2:LINE|325|+","NA","intron_intersect_chr1:155024602|155026302","intron_intersect_chr1:155024602|155026302"]
["chr1:155045449|155045676:-","chr1:155045191|155045449:-_chr1:155045676|155045853:-_chr1:155049269|155049361:-_chr1:155050607|155050853:-","UN_DCST1_LS0009","DCST1","protein coding gene","no",2.72,0,0,0.01,96,0,0,"0(0)","ESCA;OV;STAD","no","TE_intersect_:155045520|chr1|155045520|155045807|L2b:L2:LINE|319|+","NA","exon_intersect_chr1:155045191|155045853","exon_intersect_chr1:155045191|155045853"]
["chr1:155061646|155061904:+","chr1:155060266|155060343:+_chr1:155060763|155060832:+_chr1:155061415|155061646:+_chr1:155061904|155061975:+_chr1:155062245|155062369:+_chr1:155062460|155062704:+","UN_ADAM15_LS0076","ADAM15","protein coding gene","no",8.06,0,0,0.012,115,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr1:155061415|155061758","exon_intersect_chr1:155061904|155062117"]
["chr1:155067440|155085091:+","chr1:155063761|155063936:+_chr1:155064442|155064928:+_chr1:155066730|155067016:+_chr1:155067372|155067440:+_chr1:155085091|155085404:+_chr1:155085877|155085942:+_chr1:155086128|155086205:+_chr1:155086413|155086807:+","UN_AL691442.1_LS0011","AL691442.1","protein coding gene","no",1.67,0.01,0,0.009,86,0.001,1,"0(0)","ACC;CHOL","no","NA","NA","intron_intersect_chr1:155067440|155068853","exon_intersect_chr1:155085091|155085404"]
["chr1:155134082|155134276:-","chr1:155133702|155133804:-_chr1:155133948|155134082:-_chr1:155134276|155134467:-","UN_EFNA1_LS0033","EFNA1","protein coding gene","no",1.87,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155133955|155134857","exon_intersect_chr1:155133955|155134857"]
["chr1:155134198|155134276:-","chr1:155134024|155134198:-_chr1:155134276|155134449:-","UN_EFNA1_LS0042","EFNA1","protein coding gene","no",2.46,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155133955|155134857","exon_intersect_chr1:155133955|155134857"]
["chr1:155134198|155134282:-","chr1:155134017|155134198:-_chr1:155134282|155134466:-","UN_EFNA1_LS0043","EFNA1","protein coding gene","no",2.65,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155133955|155134857","exon_intersect_chr1:155133955|155134857"]
["chr1:155134275|155134324:-","chr1:155134144|155134275:-_chr1:155134324|155134493:-","UN_EFNA1_LS0054","EFNA1","protein coding gene","no",5.86,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155133955|155134857","exon_intersect_chr1:155133955|155134857"]
["chr1:155134513|155134602:+","chr1:155127839|155128069:+_chr1:155131339|155131634:+_chr1:155133503|155133568:+_chr1:155133730|155133780:+_chr1:155133955|155134119:+_chr1:155134185|155134513:+_chr1:155134602|155134906:+","UN_EFNA1_LS0061","EFNA1","protein coding gene","no",30.59,0,0,0.004,38,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:155133955|155134857","exon_intersect_chr1:155133955|155134857"]
["chr1:155138269|155138353:-","chr1:155138193|155138269:-_chr1:155138353|155138564:-_chr1:155138699|155139063:-","UN_SLC50A1_LS0020","SLC50A1","protein coding gene","no",2.26,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155138162|155138857","exon_intersect_chr1:155138162|155138857"]
["chr1:155138277|155138319:-","chr1:155138184|155138277:-_chr1:155138319|155138564:-_chr1:155138699|155138853:-","UN_SLC50A1_LS0022","SLC50A1","protein coding gene","no",6.66,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155138162|155138857","exon_intersect_chr1:155138162|155138857"]
["chr1:155138336|155138402:-","chr1:155138276|155138336:-_chr1:155138402|155138564:-_chr1:155138699|155138852:-","UN_SLC50A1_LS0028","SLC50A1","protein coding gene","no",1.87,0,0,0.007,63,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155138162|155138857","exon_intersect_chr1:155138162|155138857"]
["chr1:155138564|155138699:-","chr1:155138184|155138277:-_chr1:155138319|155138564:-_chr1:155138699|155138853:-","UN_SLC50A1_LS0033","SLC50A1","protein coding gene","no",2.52,0,0,0.018,171,0,0,"0(0)","OV","no","TE_intersect_:155138542|chr1|155138542|155138787|AluSx:Alu:SINE|90|+","TE_intersect_:155138542|chr1|155138542|155138787|AluSx:Alu:SINE|90|+","exon_intersect_chr1:155138162|155138857","exon_intersect_chr1:155138162|155138857"]
["chr1:155170152|155172565:-","chr1:155169470|155169560:-_chr1:155169791|155170152:-_chr1:155172565|155172628:-_chr1:155172738|155172892:-_chr1:155173221|155173238:-","UN_AL713999.1_LS0016","AL713999.1","protein coding gene","no",26.96,0,0,0.004,38,0,0,"0(0)","CHOL","no","NA","TE_intersect_:155170038|chr1|155170038|155170364|AluJo:Alu:SINE|153|+","exon_intersect_chr1:155172565|155173475","exon_intersect_chr1:155169787|155172489"]
["chr1:155179413|155179632:+","chr1:155174754|155179413:+_chr1:155179632|155179934:+_chr1:155181852|155182149:+_chr1:155183797|155184968:+","UN_AL713999.1_LS0054","AL713999.1","protein coding gene","no",2.35,0,0,0.004,35,0,0,"0(0)","LAML","no","TE_intersect_:155179267|chr1|155179267|155179457|MIR3:MIR:SINE|275|-","NA","intron_intersect_chr1:155178846|155179632","exon_intersect_chr1:155179632|155179935"]
["chr1:155180679|155181852:+","chr1:155173967|155174641:+_chr1:155175386|155176231:+_chr1:155176932|155177075:+_chr1:155177195|155177290:+_chr1:155178002|155178613:+_chr1:155178809|155178846:+_chr1:155179632|155179934:+_chr1:155180435|155180679:+_chr1:155181852|155184971:+","UN_AL713999.1_LS0055","AL713999.1","protein coding gene","no",0.8,0,0,0.003,28,0,0,"0(0)","OV","no","TE_intersect_:155180628|chr1|155180628|155180940|AluSp:Alu:SINE|103|+","NA","intron_intersect_chr1:155180621|155181852","exon_intersect_chr1:155181852|155182862"]
["chr1:155188694|155191668:-","chr1:155186123|155186209:-_chr1:155187225|155187374:-_chr1:155187455|155187576:-_chr1:155187722|155187858:-_chr1:155188008|155188063:-_chr1:155188163|155188694:-_chr1:155191668|155192283:-_chr1:155192786|155192867:-","UN_MUC1_LS0158","MUC1","protein coding gene","yes",25.47,1.59,0,0.005,50,0.003,2,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155191459|155192310","exon_intersect_chr1:155188163|155188987"]
["chr1:155189180|155189600:-","chr1:155185948|155186209:-_chr1:155187225|155187374:-_chr1:155187455|155187576:-_chr1:155187722|155187858:-_chr1:155188008|155188063:-_chr1:155188163|155189180:-_chr1:155189600|155189659:-_chr1:155190140|155190199:-_chr1:155191668|155192283:-_chr1:155192786|155192867:-","UN_MUC1_LS0292","MUC1","protein coding gene","yes",14.06,0.29,0,0.006,55,0.001,1,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:155189230|155190079","intron_intersect_chr1:155188987|155189214"]
["chr1:155189917|155190038:+","chr1:155187928|155188027:+_chr1:155188224|155188460:+_chr1:155188515|155188712:+_chr1:155189498|155189557:+_chr1:155189858|155189917:+_chr1:155190038|155190157:+_chr1:155191806|155191865:+_chr1:155191926|155192274:+_chr1:155192786|155192824:+","UN_MUC1_LS0370","MUC1","protein coding gene","yes",5.53,0,0,0.004,34,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:155189230|155190079","exon_intersect_chr1:155189230|155190079"]
["chr1:155190217|155191085:+","chr1:155188515|155188574:+_chr1:155188635|155188712:+_chr1:155189498|155189557:+_chr1:155190158|155190217:+_chr1:155191085|155191144:+_chr1:155191566|155191635:+","UN_MUC1_LS0433","MUC1","protein coding gene","yes",14.22,0.29,0,0.006,57,0.001,1,"0(0)","READ","no","NA","NA","intron_intersect_chr1:155190157|155190498","exon_intersect_chr1:155190955|155191337"]
["chr1:155190436|155191728:-","chr1:155185783|155186209:-_chr1:155187225|155187374:-_chr1:155187455|155187576:-_chr1:155187722|155187858:-_chr1:155188008|155188063:-_chr1:155188163|155188987:-_chr1:155189230|155190436:-_chr1:155191728|155192283:-_chr1:155192786|155192929:-","UN_MUC1_LS0457","MUC1","protein coding gene","yes",7.28,0,0,0.006,55,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:155191459|155192310","intron_intersect_chr1:155190157|155190498"]
["chr1:155190575|155190636:+","chr1:155187866|155188237:+_chr1:155188311|155188634:+_chr1:155188713|155188772:+_chr1:155188893|155189013:+_chr1:155189498|155189557:+_chr1:155190158|155190217:+_chr1:155190516|155190575:+_chr1:155190636|155190740:+_chr1:155190950|155191024:+_chr1:155191085|155191324:+_chr1:155191506|155191625:+_chr1:155191926|155192274:+_chr1:155192786|155195372:+_chr1:155196851|155197086:+","UN_MUC1_LS0480","MUC1","protein coding gene","yes",7.85,0,0,0.005,46,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr1:155190498|155190805","exon_intersect_chr1:155190498|155190805"]
["chr1:155190797|155191728:-","chr1:155185823|155186209:-_chr1:155187225|155187374:-_chr1:155187455|155187576:-_chr1:155187722|155187858:-_chr1:155188008|155188063:-_chr1:155188163|155188995:-_chr1:155189961|155190797:-_chr1:155191728|155192310:-_chr1:155192786|155192915:-","UN_MUC1_LS0509","MUC1","protein coding gene","yes",13.62,0.13,0,0.004,34,0.001,1,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:155191459|155192310","exon_intersect_chr1:155190498|155190805"]
["chr1:155191359|155192021:+","chr1:155187866|155188237:+_chr1:155188311|155188634:+_chr1:155188713|155189013:+_chr1:155189498|155189617:+_chr1:155190098|155190202:+_chr1:155190950|155191024:+_chr1:155191085|155191359:+_chr1:155192021|155192274:+_chr1:155192786|155195372:+_chr1:155196851|155197086:+","UN_MUC1_LS0576","MUC1","protein coding gene","yes",3.16,0,0,0.008,80,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","intron_intersect_chr1:155191339|155191459","exon_intersect_chr1:155191459|155192310"]
["chr1:155195368|155196899:+","chr1:155194997|155195368:+_chr1:155196899|155197017:+_chr1:155198403|155198618:+_chr1:155200172|155200311:+_chr1:155200700|155200826:+_chr1:155202033|155202102:+_chr1:155202331|155202426:+_chr1:155203123|155203271:+_chr1:155205035|155205306:+","UN_AC234582.1_LS0002","AC234582.1","lncRNA gene","no",0.85,0,0,0.004,37,0,0,"0(0)","GBM","no","NA","NA","NA","exon_intersect_chr1:155196868|155197017"]
["chr1:155195372|155196851:+","chr1:155194920|155195372:+_chr1:155196851|155197017:+_chr1:155198403|155198618:+_chr1:155200172|155200311:+_chr1:155200700|155200826:+_chr1:155203123|155203271:+_chr1:155205035|155205306:+","UN_AC234582.1_LS0005","AC234582.1","lncRNA gene","no",2.1,0,0,0.023,222,0,0,"0(0)","GBM;LGG;PAAD","no","NA","TE_intersect_:155196804|chr1|155196804|155196895|MIR3:MIR:SINE|253|-","NA","intron_intersect_chr1:155196442|155196868"]
["chr1:155195372|155196899:+","chr1:155195003|155195372:+_chr1:155196899|155197017:+_chr1:155198344|155198618:+_chr1:155200172|155200311:+_chr1:155200700|155200826:+_chr1:155205035|155205306:+","UN_AC234582.1_LS0006","AC234582.1","lncRNA gene","no",1.26,0,0,0.008,72,0,0,"0(0)","GBM;LGG","no","NA","NA","NA","exon_intersect_chr1:155196868|155197017"]
["chr1:155200826|155202033:+","chr1:155198427|155198618:+_chr1:155200172|155200311:+_chr1:155200700|155200826:+_chr1:155202033|155202102:+_chr1:155203123|155203271:+_chr1:155205035|155205306:+","UN_THBS3_LS0032","THBS3","protein coding gene","no",1.18,0.03,0,0.015,148,0.001,1,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr1:155200617|155201004","exon_intersect_chr1:155201957|155202254"]
["chr1:155218942|155244506:-","chr1:155213826|155214473:-_chr1:155214568|155214684:-_chr1:155215054|155215162:-_chr1:155215563|155215787:-_chr1:155216384|155216621:-_chr1:155216857|155217029:-_chr1:155217240|155217373:-_chr1:155217964|155218049:-_chr1:155218388|155218479:-_chr1:155218848|155218942:-_chr1:155244506|155244606:-","UN_AC234582.2_UP_LS0165","AC234582.2","lncRNA gene","no",1.63,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:155244506|155244699","exon_intersect_chr1:155218848|155219023"]
["chr1:155247780|155248152:+","chr1:155247647|155247780:+_chr1:155248152|155248235:+_chr1:155254856|155254939:+_chr1:155255314|155255453:+","UN_FAM189B_LS0008","FAM189B","protein coding gene","yes",1.36,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155247205|155247955","exon_intersect_chr1:155248050|155248303"]
["chr1:155247814|155250655:+","chr1:155247533|155247814:+_chr1:155250655|155250822:+","UN_FAM189B_LS0015","FAM189B","protein coding gene","yes",1.77,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155247205|155247955","exon_intersect_chr1:155250276|155250929"]
["chr1:155250611|155250661:+","chr1:155250272|155250611:+_chr1:155250661|155250822:+","UN_FAM189B_LS0055","FAM189B","protein coding gene","yes",1.85,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155250276|155250929","exon_intersect_chr1:155250276|155250929"]
["chr1:155302467|155314050:-","chr1:155302328|155302467:-_chr1:155314050|155318396:-_chr1:155319803|155320659:-","UN_PKLR_UP_LS0001","PKLR","protein coding gene","no",2.21,0,0,0.011,101,0,0,"0(0)","ESCA;GBM;OV;STAD","no","TE_intersect_:155313826|chr1|155313826|155314125|AluSg:Alu:SINE|107|-","TE_intersect_:155302224|chr1|155302224|155302536|AluSx:Alu:SINE|93|-","intron_intersect_chr1:155312979|155316863","NA"]
["chr1:155304889|155306176:+","chr1:155304804|155304889:+_chr1:155306176|155309076:+_chr1:155310043|155310205:+_chr1:155312255|155312395:+_chr1:155317941|155318021:+_chr1:155318169|155318753:+_chr1:155318856|155318928:+_chr1:155319611|155319688:+_chr1:155319794|155319928:+_chr1:155320409|155320665:+","UN_FDPS_UP_LS0002","FDPS","protein coding gene","yes",2.52,0,0,0.01,97,0,0,"0(0)","COAD;LIHC","no","TE_intersect_:155304792|chr1|155304792|155304940|MIRb:MIR:SINE|333|-","NA","NA","NA"]
["chr1:155320655|155357124:+","chr1:155308742|155309076:+_chr1:155310043|155310205:+_chr1:155312255|155312395:+_chr1:155317941|155318021:+_chr1:155318169|155318291:+_chr1:155318665|155318753:+_chr1:155318856|155318928:+_chr1:155319611|155319688:+_chr1:155319794|155319928:+_chr1:155320409|155320655:+_chr1:155357124|155357159:+","UN_RNU6-1297P_UP_LS0001","RNU6-1297P","small non-coding RNA gene","no",2.74,0,0,0.006,57,0,0,"0(0)","STAD","no","NA","TE_intersect_:155357119|chr1|155357119|155357159|AluJo:Alu:SINE|159|+","exon_intersect_chr1:155320159|155321695","intron_intersect_chr1:155354630|155357316"]
["chr1:155326868|155327062:-","chr1:155326719|155326868:-_chr1:155327062|155327114:-","UN_RUSC1_LS0035","RUSC1","protein coding gene","no",0.91,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:155325864|155327132","exon_intersect_chr1:155325864|155327132"]
["chr1:155482449|155512932:-","chr1:155364944|155370650:-_chr1:155370777|155370983:-_chr1:155378281|155378389:-_chr1:155378503|155378548:-_chr1:155380043|155380116:-_chr1:155395459|155395553:-_chr1:155415744|155415923:-_chr1:155438327|155439068:-_chr1:155459797|155459898:-_chr1:155477886|155482449:-_chr1:155512932|155513034:-_chr1:155521100|155521618:-_chr1:155562779|155562840:-","UN_ASH1L_LS0070","ASH1L","protein coding gene","no",1.98,0.04,0,0.004,41,0.001,1,"0(0)","LAML","no","TE_intersect_:155512781|chr1|155512781|155513071|AluJb:Alu:SINE|172|+","NA","intron_intersect_chr1:155482449|155520225","intron_intersect_chr1:155482449|155520225"]
["chr1:155513034|155521100:-","chr1:155364944|155370650:-_chr1:155370777|155370983:-_chr1:155378281|155378389:-_chr1:155378503|155378548:-_chr1:155380043|155380116:-_chr1:155395459|155395553:-_chr1:155415744|155415923:-_chr1:155438327|155439068:-_chr1:155459797|155459898:-_chr1:155477886|155482449:-_chr1:155512932|155513034:-_chr1:155521100|155521618:-_chr1:155562779|155562840:-","UN_ASH1L_LS0075","ASH1L","protein coding gene","no",3.4,0.04,0,0.005,44,0.001,1,"0(0)","LAML","no","NA","TE_intersect_:155512781|chr1|155512781|155513071|AluJb:Alu:SINE|172|+","exon_intersect_chr1:155521100|155521618","intron_intersect_chr1:155482449|155520225"]
["chr1:155622636|155627305:-","chr1:155622190|155622636:-_chr1:155627305|155627727:-_chr1:155634770|155634846:-_chr1:155637394|155637605:-","UN_AL353807.3_LS0019","AL353807.3","pseudogene","no",1.85,0,0,0.011,105,0,0,"0(0)","LAML;OV;STAD","no","TE_intersect_:155626665|chr1|155626665|155627633|LTR5_Hs:ERVK:LTR|10|-","TE_intersect_:155622389|chr1|155622389|155623035|HERV17-int:ERV1:LTR|241|-","intron_intersect_chr1:155619028|155646493","intron_intersect_chr1:155619028|155646493"]
["chr1:155629469|155634770:-","chr1:155626730|155629469:-_chr1:155634770|155634846:-_chr1:155637394|155637492:-_chr1:155648406|155648592:-","UN_AL353807.3_LS0032","AL353807.3","pseudogene","no",4.17,0,0,0.003,29,0,0,"0(0)","TGCT","no","TE_intersect_:155629343|chr1|155629343|155634877|HERVK-int:ERVK:LTR|8|-","TE_intersect_:155629343|chr1|155629343|155634877|HERVK-int:ERVK:LTR|8|-","intron_intersect_chr1:155619028|155646493","intron_intersect_chr1:155619028|155646493"]
["chr1:15572019|15573134:-","chr1:15571730|15572019:-_chr1:15573134|15573724:-_chr1:15574757|15574841:-_chr1:15577685|15577864:-_chr1:15578859|15579054:-_chr1:15580094|15580142:-_chr1:15583193|15583395:-_chr1:15584696|15585067:-","UN_DNAJC16_LS0029","DNAJC16","protein coding gene","no",3.31,0,0,0.007,63,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:15572975|chr1|15572975|15573268|AluSq2:Alu:SINE|85|+","TE_intersect_:15571946|chr1|15571946|15572166|AluSx:Alu:SINE|77|+","exon_intersect_chr1:15572353|15573724","intron_intersect_chr1:15571733|15572353"]
["chr1:155832950|155834282:-","chr1:155832829|155832950:-_chr1:155834282|155834621:-","UN_GON4L_LS0064","GON4L","protein coding gene","no",2.52,0,0,0.03,291,0,0,"0(0)","DLBC;GBM;LUAD;OV;SKCM;TGCT","no","NA","NA","intron_intersect_chr1:155832950|155845367","intron_intersect_chr1:155832950|155845367"]
["chr1:155859795|155866635:+","chr1:155859514|155859795:+_chr1:155866635|155866737:+_chr1:155867965|155868791:+_chr1:155880500|155880620:+_chr1:155881198|155885199:+","UN_SYT11_LS0002","SYT11","protein coding gene","no",0.97,0,0,0.01,98,0,0,"0(0)","GBM;LGG;PCPG","no","NA","TE_intersect_:155866431|chr1|155866431|155866784|L2a:L2:LINE|239|-","intron_intersect_chr1:155859795|155867965","intron_intersect_chr1:155859795|155867965"]
["chr1:155866737|155867965:+","chr1:155859514|155859795:+_chr1:155866635|155866737:+_chr1:155867965|155868791:+_chr1:155880500|155880620:+_chr1:155881198|155885199:+","UN_SYT11_LS0006","SYT11","protein coding gene","no",0.96,0,0,0.01,100,0,0,"0(0)","GBM;LGG;PCPG","no","TE_intersect_:155866431|chr1|155866431|155866784|L2a:L2:LINE|239|-","NA","intron_intersect_chr1:155859795|155867965","exon_intersect_chr1:155867965|155868791"]
["chr1:155881842|155900898:-","chr1:155881495|155881842:-_chr1:155900898|155900912:-","UN_GON4L_UP_LS0001","GON4L","protein coding gene","no",4.35,0,0,0.005,52,0,0,"0(0)","LGG","no","TE_intersect_:155900825|chr1|155900825|155901114|AluSp:Alu:SINE|107|-","TE_intersect_:155881722|chr1|155881722|155882028|AluSq2:Alu:SINE|105|-","intron_intersect_chr1:155900618|155904311","exon_intersect_chr1:155881198|155885199"]
["chr1:155934549|155935248:+","chr1:155934472|155934549:+_chr1:155935248|155935642:+","UN_RXFP4_UP_LS0001","RXFP4","protein coding gene","no",1.76,0,0,0.009,86,0,0,"0(0)","GBM;OV","no","NA","TE_intersect_:155935212|chr1|155935212|155935533|AluSx1:Alu:SINE|87|-","NA","NA"]
["chr1:155979455|155980867:+","chr1:155979228|155979455:+_chr1:155980867|155982988:+","UN_ARHGEF2_LS0058","ARHGEF2","protein coding gene","yes",2.05,0,0,0.004,42,0,0,"0(0)","DLBC;OV;UCS","no","NA","NA","intron_intersect_chr1:155979113|155980867","exon_intersect_chr1:155980867|155982986"]
["chr1:155984433|155984515:-","chr1:155952732|155952828:-_chr1:155954902|155954969:-_chr1:155957713|155957882:-_chr1:155958320|155958396:-_chr1:155961661|155961909:-_chr1:155962105|155962222:-_chr1:155962593|155962718:-_chr1:155962933|155963183:-_chr1:155964988|155965128:-_chr1:155965303|155965412:-_chr1:155965631|155965760:-_chr1:155966416|155966479:-_chr1:155966820|155966887:-_chr1:155969156|155969300:-_chr1:155983107|155983200:-_chr1:155984394|155984433:-_chr1:155984515|155984566:-","UN_ARHGEF2_LS0073","ARHGEF2","protein coding gene","yes",1,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:155984433|155985332","intron_intersect_chr1:155984433|155985332"]
["chr1:156009526|156015042:+","chr1:156009048|156009295:+_chr1:156009371|156009526:+_chr1:156015042|156015065:+","UN_SSR2_LS0060","SSR2","protein coding gene","no",0.55,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156009048|156009650","exon_intersect_chr1:156010221|156015073"]
["chr1:156009621|156014988:+","chr1:156009048|156009176:+_chr1:156009200|156009621:+_chr1:156014988|156015061:+","UN_SSR2_LS0068","SSR2","protein coding gene","no",1.14,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156009048|156009650","exon_intersect_chr1:156010221|156015073"]
["chr1:156011868|156014988:+","chr1:156011811|156011868:+_chr1:156014988|156015232:+","UN_SSR2_LS0073","SSR2","protein coding gene","no",4.03,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156010221|156015073","exon_intersect_chr1:156010221|156015073"]
["chr1:156042377|156042774:-","chr1:156035301|156037130:-_chr1:156041485|156041671:-_chr1:156041872|156041987:-_chr1:156042153|156042377:-_chr1:156042774|156042913:-_chr1:156048501|156048661:-","UN_UBQLN4_LS0019","UBQLN4","protein coding gene","no",3.53,0,0,0.006,56,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:156042774|156042913","exon_intersect_chr1:156042153|156042538"]
["chr1:156051857|156077068:-","chr1:156041872|156041987:-_chr1:156042153|156042236:-_chr1:156042774|156042913:-_chr1:156043998|156044223:-_chr1:156048501|156048659:-_chr1:156050291|156050553:-_chr1:156051110|156051327:-_chr1:156051706|156051857:-_chr1:156077068|156077354:-_chr1:156077468|156077682:-_chr1:156081545|156081704:-","UN_SSR2_UP_LS0008","SSR2","protein coding gene","no",3.59,0,0,0.002,21,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156072013|156077682","intron_intersect_chr1:156051857|156053594"]
["chr1:156068414|156070355:-","chr1:156068270|156068414:-_chr1:156070355|156070496:-","UN_RAB25_LS0026","RAB25","protein coding gene","yes",4,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156070160|156070514","exon_intersect_chr1:156068212|156068463"]
["chr1:156077122|156077178:+","chr1:156076920|156077122:+_chr1:156077178|156077443:+","UN_MEX3A_LS0022","MEX3A","protein coding gene","no",1.42,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156072013|156077682","exon_intersect_chr1:156072013|156077682"]
["chr1:156081375|156082948:+","chr1:156081281|156081375:+_chr1:156082948|156083184:+_chr1:156090471|156090582:+_chr1:156114670|156115274:+_chr1:156130617|156130773:+_chr1:156134403|156134528:+_chr1:156134805|156135312:+_chr1:156135901|156136121:+_chr1:156136214|156136436:+_chr1:156136921|156137028:+_chr1:156137113|156137232:+_chr1:156137654|156137743:+_chr1:156138488|156138757:+_chr1:156139080|156140134:+","UN_SEMA4A_UP_LS0001","SEMA4A","protein coding gene","no",2.65,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:156077682|156081545","exon_intersect_chr1:156082948|156083184"]
["chr1:156083184|156084381:+","chr1:156082565|156083184:+_chr1:156084381|156092044:+_chr1:156113191|156114284:+_chr1:156114670|156115274:+_chr1:156130617|156130773:+_chr1:156134403|156134528:+_chr1:156134805|156134975:+_chr1:156135187|156135312:+_chr1:156135901|156136121:+_chr1:156136214|156136436:+_chr1:156136921|156137028:+_chr1:156137113|156137232:+_chr1:156137654|156138607:+_chr1:156139377|156139449:+_chr1:156139531|156140086:+","UN_LMNA_LS0002","LMNA","protein coding gene","no",2.57,0,0,0.007,68,0,0,"0(0)","LGG;UCS","no","NA","NA","intron_intersect_chr1:156083184|156083521","intron_intersect_chr1:156083613|156090471"]
["chr1:156136088|156136221:-","chr1:156135243|156135279:-_chr1:156135909|156136088:-_chr1:156136221|156136427:-","UN_LMNA_LS0095","LMNA","protein coding gene","no",16.19,0,0,0.004,38,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:156136214|156137292","exon_intersect_chr1:156135733|156136121"]
["chr1:156138558|156138618:-","chr1:156138395|156138558:-_chr1:156138618|156139114:-_chr1:156139497|156139894:-","UN_LMNA_LS0141","LMNA","protein coding gene","no",4.12,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156137462|156138757","exon_intersect_chr1:156137462|156138757"]
["chr1:156139114|156139497:-","chr1:156138395|156138558:-_chr1:156138618|156139114:-_chr1:156139497|156139894:-","UN_LMNA_LS0162","LMNA","protein coding gene","no",1.32,0,0,0.005,51,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156139080|156140089","exon_intersect_chr1:156139080|156140089"]
["chr1:156139392|156139462:-","chr1:156139253|156139392:-_chr1:156139462|156139650:-","UN_LMNA_LS0177","LMNA","protein coding gene","no",12.77,0,0,0.004,35,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:156139080|156140089","exon_intersect_chr1:156139080|156140089"]
["chr1:156147430|156156414:+","chr1:156147366|156147430:+_chr1:156156414|156156574:+_chr1:156158070|156158132:+_chr1:156158388|156158486:+_chr1:156158719|156158824:+_chr1:156160443|156160559:+_chr1:156160905|156161029:+_chr1:156161346|156161493:+","UN_SEMA4A_LS0002","SEMA4A","protein coding gene","no",4.77,0,0,0.009,82,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:156147430|156149723","exon_intersect_chr1:156154371|156156574"]
["chr1:156244281|156244313:+","chr1:156243982|156244281:+_chr1:156244313|156244390:+","UN_PAQR6_LS0005","PAQR6","protein coding gene","no",4.02,0,0,0.003,25,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:156243321|156244403","exon_intersect_chr1:156243321|156244403"]
["chr1:156244911|156245535:-","chr1:156244774|156244911:-_chr1:156245535|156245661:-_chr1:156245782|156245987:-_chr1:156246123|156246250:-_chr1:156246681|156246756:-_chr1:156247957|156248014:-","PAQR6_LS007","PAQR6","protein coding gene","no",5.23,0.04,0,0.017,165,0.003,2,"0(0)","GBM","yes","NA","NA","exon_intersect_chr1:156245535|156245661","intron_intersect_chr1:156244911|156245142"]
["chr1:156245852|156246123:-","chr1:156245154|156245238:-_chr1:156245535|156245661:-_chr1:156245782|156245852:-_chr1:156246123|156246250:-_chr1:156246681|156246756:-_chr1:156247957|156248014:-","UN_PAQR6_LS0010","PAQR6","protein coding gene","no",3.55,0,0,0.003,27,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:156245782|156246250","exon_intersect_chr1:156245782|156246250"]
["chr1:156246756|156247345:-","chr1:156243423|156244403:-_chr1:156244690|156244911:-_chr1:156245142|156245238:-_chr1:156245535|156245661:-_chr1:156245782|156246250:-_chr1:156246681|156246756:-_chr1:156247345|156248014:-","UN_PAQR6_LS0011","PAQR6","protein coding gene","no",1.91,0.07,0,0.004,41,0.001,1,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:156246756|156247510","intron_intersect_chr1:156246756|156247510"]
["chr1:156246756|156249569:-","chr1:156245154|156245238:-_chr1:156245535|156245661:-_chr1:156245782|156245987:-_chr1:156246123|156246250:-_chr1:156246681|156246756:-_chr1:156249569|156250670:-_chr1:156250858|156250996:-_chr1:156251403|156251477:-_chr1:156252414|156252504:-_chr1:156252919|156253078:-_chr1:156253449|156253508:-_chr1:156259005|156259163:-_chr1:156260451|156260626:-_chr1:156261333|156261408:-_chr1:156263395|156263570:-_chr1:156265781|156266380:-_chr1:156266541|156266678:-_chr1:156267470|156267588:-","UN_RF00568_UP_LS0009","RF00568","small non-coding RNA gene","no",12.39,0,0,0.028,269,0,0,"0(0)","CHOL;LAML;MESO;PCPG;PRAD;THYM;UCEC","no","NA","NA","exon_intersect_chr1:156249224|156250670","intron_intersect_chr1:156246756|156247510"]
["chr1:156249474|156250327:+","chr1:156248764|156249474:+_chr1:156250327|156250653:+_chr1:156259113|156259251:+","UN_SMG5_LS0009","SMG5","protein coding gene","no",1.64,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156249224|156250670","exon_intersect_chr1:156249224|156250670"]
["chr1:156279034|156282424:-","chr1:156250033|156250670:-_chr1:156250858|156250996:-_chr1:156251403|156251477:-_chr1:156252414|156252504:-_chr1:156252919|156253078:-_chr1:156253449|156253508:-_chr1:156259005|156259163:-_chr1:156260451|156260626:-_chr1:156261333|156261408:-_chr1:156263395|156263570:-_chr1:156265781|156266380:-_chr1:156266541|156266678:-_chr1:156267470|156267678:-_chr1:156268115|156268183:-_chr1:156268290|156268415:-_chr1:156272320|156272398:-_chr1:156273361|156273450:-_chr1:156274597|156274686:-_chr1:156277085|156277241:-_chr1:156277925|156278048:-_chr1:156278936|156279034:-_chr1:156282424|156282825:-","SMG5_LS023","SMG5","protein coding gene","no",2.87,0,0,0.002,23,0,0,"0(0)","LAML","yes","NA","NA","intron_intersect_chr1:156279034|156282607","intron_intersect_chr1:156279034|156282607"]
["chr1:156279036|156284329:+","chr1:156279006|156279036:+_chr1:156284329|156284406:+_chr1:156285184|156285983:+_chr1:156286260|156286473:+_chr1:156291385|156291525:+","UN_TSACC_UP_LS0002","TSACC","protein coding gene","no",0.75,0,0,0.003,33,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:156279034|156282607","exon_intersect_chr1:156284279|156284406"]
["chr1:156294077|156294372:+","chr1:156294031|156294077:+_chr1:156294372|156294524:+","UN_GLMP_LS0014","GLMP","protein coding gene","no",1.35,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156293320|156294236","exon_intersect_chr1:156294365|156295016"]
["chr1:156311112|156312071:+","chr1:156310587|156310660:+_chr1:156311001|156311112:+_chr1:156312071|156312224:+","UN_CCT3_LS0017","CCT3","protein coding gene","no",3.72,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156310950|156311195","exon_intersect_chr1:156312041|156312221"]
["chr1:156338605|156344580:+","chr1:156338524|156338605:+_chr1:156344580|156344708:+_chr1:156346779|156346990:+","UN_CCT3_LS0042","CCT3","protein coding gene","no",2.07,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:156338605|156338628","exon_intersect_chr1:156344580|156344708"]
["chr1:156405017|156407751:+","chr1:156404898|156405017:+_chr1:156407751|156407917:+","UN_C1orf61_LS0011","C1orf61","protein coding gene","no",1.9,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:156404250|156409030","exon_intersect_chr1:156404250|156409030"]
["chr1:156418034|156426798:-","chr1:156404412|156404601:-_chr1:156414654|156414753:-_chr1:156416769|156416864:-_chr1:156417912|156418034:-_chr1:156426798|156426872:-","UN_C1orf61_LS0028","C1orf61","protein coding gene","no",5.34,0.01,0,0.004,39,0.003,2,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:156425637|156426872","intron_intersect_chr1:156418034|156420171"]
["chr1:156430119|156456353:-","chr1:156404508|156404601:-_chr1:156414654|156414753:-_chr1:156426798|156426872:-_chr1:156429376|156429548:-_chr1:156430030|156430119:-_chr1:156456353|156456577:-","UN_MIR9-1_UP_LS0002","MIR9-1","small non-coding RNA gene","yes",4.36,0,0,0.004,42,0,0,"0(0)","GBM","no","TE_intersect_:156456173|chr1|156456173|156456368|MIRc:MIR:SINE|348|+","NA","exon_intersect_chr1:156456353|156456577","intron_intersect_chr1:156430119|156430497"]
["chr1:156467656|156468780:-","chr1:156466210|156467656:-_chr1:156468780|156469020:-_chr1:156475108|156475237:-_chr1:156477012|156477202:-_chr1:156479290|156479346:-_chr1:156479586|156479780:-","MEF2D_LS004","MEF2D","protein coding gene","no",3.34,0,0,0.006,54,0,0,"0(0)","OV","yes","NA","NA","exon_intersect_chr1:156468780|156469020","intron_intersect_chr1:156467656|156467993"]
["chr1:156469367|156469809:-","chr1:156463727|156467656:-_chr1:156467993|156468299:-_chr1:156468780|156469367:-_chr1:156469809|156475237:-_chr1:156477012|156477202:-_chr1:156479290|156479780:-","UN_MEF2D_LS0071","MEF2D","protein coding gene","no",25.99,0,0,0.003,30,0,0,"0(0)","LAML","no","TE_intersect_:156469608|chr1|156469608|156469891|AluJo:Alu:SINE|170|+","TE_intersect_:156469252|chr1|156469252|156469557|AluSz:Alu:SINE|125|-","intron_intersect_chr1:156469020|156475108","intron_intersect_chr1:156469020|156475108"]
["chr1:15646984|15649720:+","chr1:15646218|15646984:+_chr1:15649720|15649823:+_chr1:15651706|15651895:+_chr1:15659837|15669044:+","UN_DDI2_LS0011","DDI2","protein coding gene","no",2.76,0,0,0.003,25,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:15643650|15649720","exon_intersect_chr1:15649720|15649823"]
["chr1:156483430|156486230:-","chr1:156466210|156467656:-_chr1:156467993|156468299:-_chr1:156468780|156469020:-_chr1:156475108|156475237:-_chr1:156477012|156477202:-_chr1:156479290|156479346:-_chr1:156479586|156479796:-_chr1:156480834|156480971:-_chr1:156482437|156482640:-_chr1:156483239|156483430:-_chr1:156486230|156495266:-_chr1:156495927|156500753:-","UN_MEF2D_LS0085","MEF2D","protein coding gene","no",3.41,0,0,0.002,20,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:156484210|156490512","intron_intersect_chr1:156483430|156484098"]
["chr1:156483430|156495153:-","chr1:156483261|156483430:-_chr1:156495153|156495266:-_chr1:156500486|156500753:-","UN_MEF2D_LS0089","MEF2D","protein coding gene","no",2.3,0.1,0,0.007,63,0.004,3,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:156490599|156499432","intron_intersect_chr1:156483430|156484098"]
["chr1:156564691|156565336:-","chr1:156525403|156526599:-_chr1:156527952|156528060:-_chr1:156528509|156528610:-_chr1:156528916|156529082:-_chr1:156530105|156530317:-_chr1:156531160|156531247:-_chr1:156532980|156533106:-_chr1:156533773|156533875:-_chr1:156534009|156534141:-_chr1:156534501|156534733:-_chr1:156535163|156535247:-_chr1:156537181|156537321:-_chr1:156538809|156539033:-_chr1:156539374|156539537:-_chr1:156539838|156539990:-_chr1:156540708|156540916:-_chr1:156543981|156544050:-_chr1:156544152|156544223:-_chr1:156544389|156544472:-_chr1:156548073|156548243:-_chr1:156548348|156548487:-_chr1:156548581|156548748:-_chr1:156550261|156550351:-_chr1:156551705|156551868:-_chr1:156551974|156552095:-_chr1:156554235|156554392:-_chr1:156556533|156556693:-_chr1:156560934|156561021:-_chr1:156561838|156563312:-_chr1:156563553|156563666:-_chr1:156563757|156563824:-_chr1:156564615|156564691:-_chr1:156565336|156565432:-_chr1:156566027|156566104:-_chr1:156566390|156566546:-_chr1:156569376|156569463:-_chr1:156572493|156572553:-","UN_IQGAP3_LS0069","IQGAP3","protein coding gene","no",2,0,0,0.013,124,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:156564691|156566027","intron_intersect_chr1:156564691|156566027"]
["chr1:156583170|156583322:+","chr1:156582293|156582434:+_chr1:156583042|156583170:+_chr1:156583322|156583450:+_chr1:156583797|156583895:+_chr1:156584877|156584974:+_chr1:156585125|156587719:+","UN_TTC24_LS0001","TTC24","protein coding gene","no",3.97,0,0,0.001,12,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:156583170|156583338","intron_intersect_chr1:156583170|156583338"]
["chr1:156585231|156585949:+","chr1:156582293|156582434:+_chr1:156583042|156583170:+_chr1:156583338|156583450:+_chr1:156583797|156583895:+_chr1:156584877|156584974:+_chr1:156585125|156585231:+_chr1:156585949|156587732:+","TTC24_LS012","TTC24","protein coding gene","no",2.33,0,0,0.004,34,0,0,"0(0)","DLBC;THYM","yes","NA","NA","exon_intersect_chr1:156585125|156585841","exon_intersect_chr1:156585949|156586045"]
["chr1:156586366|156586469:+","chr1:156582293|156582434:+_chr1:156583042|156583170:+_chr1:156583338|156583450:+_chr1:156583797|156583895:+_chr1:156584877|156584974:+_chr1:156585125|156585231:+_chr1:156585713|156586366:+_chr1:156586469|156587149:+_chr1:156587210|156587724:+","UN_TTC24_LS0005","TTC24","protein coding gene","no",3.97,0,0,0.007,71,0,0,"0(0)","DLBC;LAML;THYM","no","NA","NA","intron_intersect_chr1:156586045|156586469","exon_intersect_chr1:156586469|156586770"]
["chr1:156587119|156587180:+","chr1:156582293|156582434:+_chr1:156583042|156583170:+_chr1:156583338|156583450:+_chr1:156583797|156583895:+_chr1:156584877|156584974:+_chr1:156585125|156585826:+_chr1:156585949|156586045:+_chr1:156586469|156587119:+_chr1:156587180|156587843:+","UN_NAXE_UP_LS0002","NAXE","protein coding gene","no",10.74,0.1,0,0.01,98,0.001,1,"0(0)","LAML;THYM","no","NA","NA","NA","NA"]
["chr1:156587119|156587210:+","chr1:156581365|156582070:+_chr1:156582231|156582434:+_chr1:156583042|156583170:+_chr1:156583338|156583450:+_chr1:156583797|156583895:+_chr1:156584877|156584974:+_chr1:156585125|156586045:+_chr1:156586469|156587119:+_chr1:156587210|156587724:+","UN_NAXE_UP_LS0003","NAXE","protein coding gene","no",13.56,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","TE_intersect_:156587206|chr1|156587206|156587397|MIR:MIR:SINE|242|-","NA","NA"]
["chr1:156587149|156587210:+","chr1:156582293|156582434:+_chr1:156583042|156583170:+_chr1:156583338|156583450:+_chr1:156583797|156583895:+_chr1:156584877|156584974:+_chr1:156585125|156587149:+_chr1:156587210|156587723:+","UN_NAXE_UP_LS0005","NAXE","protein coding gene","no",9.49,0,0,0.011,104,0,0,"0(0)","DLBC;LAML;THYM","no","NA","TE_intersect_:156587206|chr1|156587206|156587397|MIR:MIR:SINE|242|-","NA","NA"]
["chr1:156619535|156620059:+","chr1:156591892|156591986:+_chr1:156592101|156592209:+_chr1:156592365|156592475:+_chr1:156592557|156592670:+_chr1:156593408|156593555:+_chr1:156593882|156594090:+_chr1:156619461|156619535:+_chr1:156620059|156620106:+","HAPLN2_LS007","HAPLN2","protein coding gene","no",1.87,0,0,0.002,22,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chr1:156619535|156619969","exon_intersect_chr1:156619969|156620158"]
["chr1:156623575|156623916:+","chr1:156619446|156619535:+_chr1:156619969|156620158:+_chr1:156623467|156623575:+_chr1:156623916|156624467:+_chr1:156624601|156624783:+_chr1:156624994|156625535:+","UN_HAPLN2_LS0019","HAPLN2","protein coding gene","no",2.53,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:156623467|156624467","exon_intersect_chr1:156623467|156624467"]
["chr1:156624160|156624376:+","chr1:156619446|156619535:+_chr1:156620018|156620158:+_chr1:156623467|156623575:+_chr1:156623807|156624160:+_chr1:156624376|156625535:+","UN_HAPLN2_LS0021","HAPLN2","protein coding gene","no",7.52,0.06,0,0.009,83,0.001,1,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:156623467|156624467","exon_intersect_chr1:156623467|156624467"]
["chr1:156642275|156646034:-","chr1:156642088|156642275:-_chr1:156646034|156647159:-","UN_BCAN_LS0002","BCAN","protein coding gene","no",6.7,0,0,0.006,53,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:156644887|156646047","exon_intersect_chr1:156641666|156644887"]
["chr1:156646126|156646893:-","chr1:156637782|156646126:-_chr1:156646893|156647155:-","UN_BCAN_LS0009","BCAN","protein coding gene","no",10.49,0,0,0.012,116,0,0,"0(0)","COAD;STAD","no","NA","NA","exon_intersect_chr1:156646507|156647154","exon_intersect_chr1:156646047|156646145"]
["chr1:156646145|156646975:+","chr1:156642132|156642275:+_chr1:156646047|156646145:+_chr1:156646975|156647175:+_chr1:156647508|156647682:+_chr1:156647983|156648110:+_chr1:156648568|156648861:+_chr1:156651456|156651689:+_chr1:156652248|156652892:+_chr1:156656282|156656389:+_chr1:156656938|156657096:+_chr1:156657675|156657757:+_chr1:156658127|156658271:+_chr1:156658543|156658733:+_chr1:156659027|156659528:+","UN_BCAN_LS0012","BCAN","protein coding gene","no",175.8,0,0,0.008,80,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:156646145|156646507","exon_intersect_chr1:156646507|156647154"]
["chr1:156648676|156648705:-","chr1:156648569|156648676:-_chr1:156648705|156648862:-","UN_BCAN_LS0024","BCAN","protein coding gene","no",36.8,0,0,0.009,90,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr1:156648568|156648861","exon_intersect_chr1:156648568|156648861"]
["chr1:156652664|156652819:-","chr1:156648592|156651467:-_chr1:156651499|156652664:-_chr1:156652819|156652918:-","UN_BCAN_LS0035","BCAN","protein coding gene","no",17.07,0,0,0.003,33,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:156652248|156653472","exon_intersect_chr1:156652248|156653472"]
["chr1:156670261|156670288:+","chr1:156669941|156670261:+_chr1:156670288|156670658:+","UN_NES_LS0029","NES","protein coding gene","no",4.52,0,0,0.003,25,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:156668763|156673205","exon_intersect_chr1:156668763|156673205"]
["chr1:156670603|156712291:+","chr1:156670302|156670603:+_chr1:156712291|156712303:+","UN_RRNAD1_UP_LS0002","RRNAD1","protein coding gene","no",3.01,0,0,0.003,26,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:156668763|156673205","exon_intersect_chr1:156712212|156712347"]
["chr1:156671795|156672183:+","chr1:156671775|156671795:+_chr1:156672183|156672491:+","UN_NES_LS0066","NES","protein coding gene","no",1.65,0,0,0.003,29,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:156668763|156673205","exon_intersect_chr1:156668763|156673205"]
["chr1:156673527|156673702:-","chr1:156668763|156673205:-_chr1:156673454|156673527:-_chr1:156673702|156675340:-_chr1:156676482|156677397:-","UN_NES_LS0078","NES","protein coding gene","no",2.99,0,0,0.003,26,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:156673527|156675216","intron_intersect_chr1:156673527|156675216"]
["chr1:156677198|156677533:+","chr1:156677002|156677198:+_chr1:156677533|156677743:+","UN_AL590666.4_UP_LS0002","AL590666.4","lncRNA gene","no",1.2,0,0,0.003,27,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:156676482|156677397","NA"]
["chr1:156705546|156707872:-","chr1:156699596|156700076:-_chr1:156700542|156700658:-_chr1:156700874|156701052:-_chr1:156705377|156705546:-_chr1:156707872|156708008:-","UN_AL590666.3_UP_LS0005","AL590666.3","lncRNA gene","no",2.63,0,0,0.008,75,0,0,"0(0)","PAAD;SARC","no","NA","NA","NA","exon_intersect_chr1:156705377|156705601"]
["chr1:156742586|156742748:+","chr1:156742164|156742586:+_chr1:156742748|156742980:+_chr1:156743143|156743187:+_chr1:156743268|156743376:+","UN_HDGF_LS0041","HDGF","protein coding gene","no",3.81,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156742107|156743878","exon_intersect_chr1:156742107|156743878"]
["chr1:156742964|156743374:+","chr1:156741132|156741147:+_chr1:156742667|156742964:+_chr1:156743374|156743455:+","UN_HDGF_LS0102","HDGF","protein coding gene","no",6.71,0,0,0.002,23,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:156742107|156743878","exon_intersect_chr1:156742107|156743878"]
["chr1:156743267|156743817:+","chr1:156742565|156742747:+_chr1:156743016|156743267:+_chr1:156743817|156743880:+","UN_HDGF_LS0165","HDGF","protein coding gene","no",4.45,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156742107|156743878","exon_intersect_chr1:156742107|156743878"]
["chr1:156743420|156743817:+","chr1:156742582|156742778:+_chr1:156743016|156743187:+_chr1:156743268|156743420:+_chr1:156743817|156744243:+","UN_HDGF_LS0179","HDGF","protein coding gene","no",1.96,0,0,0.006,54,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156742107|156743878","exon_intersect_chr1:156742107|156743878"]
["chr1:156767925|156768007:-","chr1:156767785|156767925:-_chr1:156768007|156768160:-","UN_PRCC_LS0026","PRCC","protein coding gene","no",2.39,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156767500|156768239","exon_intersect_chr1:156767500|156768239"]
["chr1:156809342|156809661:-","chr1:156806243|156806573:-_chr1:156807175|156807345:-_chr1:156809203|156809342:-_chr1:156809661|156809807:-_chr1:156814205|156814294:-_chr1:156815037|156815221:-_chr1:156816006|156816094:-_chr1:156816675|156816760:-","UN_SH2D2A_LS0005","SH2D2A","protein coding gene","no",3.19,0,0,0.007,70,0,0,"0(0)","PCPG;THYM","no","NA","NA","exon_intersect_chr1:156809661|156809807","exon_intersect_chr1:156809203|156809490"]
["chr1:15681699|15716237:+","chr1:15681482|15681699:+_chr1:15716237|15716343:+_chr1:15716707|15716816:+_chr1:15717893|15717992:+_chr1:15718538|15718625:+_chr1:15719734|15719869:+","UN_SLC25A34_UP_LS0002","SLC25A34","protein coding gene","no",9.06,0,0,0.01,92,0,0,"0(0)","SKCM;UVM","no","NA","NA","NA","exon_intersect_chr1:15716237|15716343"]
["chr1:156844278|156844462:-","chr1:156840063|156841104:-_chr1:156841394|156841794:-_chr1:156842112|156842271:-_chr1:156842398|156844278:-_chr1:156844462|156844624:-_chr1:156844707|156845413:-_chr1:156845619|156845814:-_chr1:156845952|156846119:-_chr1:156846519|156847671:-","UN_INSRR_LS0008","INSRR","protein coding gene","no",3.92,0,0,0.001,13,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:156844462|156844624","exon_intersect_chr1:156844175|156844280"]
["chr1:156849485|156851290:-","chr1:156840063|156841104:-_chr1:156841394|156841528:-_chr1:156841665|156841794:-_chr1:156842112|156842271:-_chr1:156842398|156842508:-_chr1:156843004|156844280:-_chr1:156844462|156844624:-_chr1:156844707|156845296:-_chr1:156845372|156845413:-_chr1:156845619|156845814:-_chr1:156845952|156846119:-_chr1:156846519|156846757:-_chr1:156848921|156849047:-_chr1:156849246|156849485:-_chr1:156851290|156851788:-_chr1:156851888|156852191:-_chr1:156853752|156854303:-_chr1:156858537|156859018:-","UN_INSRR_LS0014","INSRR","protein coding gene","no",3.49,0,0,0.002,15,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:156851290|156851434","intron_intersect_chr1:156849460|156851290"]
["chr1:156858693|156859367:-","chr1:156840063|156841104:-_chr1:156841394|156841528:-_chr1:156841665|156841794:-_chr1:156842112|156842271:-_chr1:156842398|156843479:-_chr1:156844175|156844280:-_chr1:156844462|156844624:-_chr1:156844707|156844843:-_chr1:156845076|156845296:-_chr1:156845372|156845413:-_chr1:156845619|156845814:-_chr1:156845952|156846119:-_chr1:156846519|156846757:-_chr1:156848921|156849047:-_chr1:156849246|156849460:-_chr1:156851290|156851788:-_chr1:156851888|156852191:-_chr1:156853752|156854303:-_chr1:156858537|156858693:-_chr1:156859367|156860779:-","UN_NTRK1_LS0005","NTRK1","protein coding gene","yes",3.74,0,0,0.01,97,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:156859018|156860815","exon_intersect_chr1:156858537|156859018"]
["chr1:156879360|156879999:+","chr1:156860913|156861146:+_chr1:156864354|156864428:+_chr1:156864728|156864799:+_chr1:156866910|156866978:+_chr1:156868104|156868249:+_chr1:156868505|156868647:+_chr1:156871623|156871755:+_chr1:156873633|156873959:+_chr1:156874571|156874626:+_chr1:156874906|156875008:+_chr1:156875520|156875666:+_chr1:156876080|156876210:+_chr1:156876400|156876572:+_chr1:156879122|156879360:+_chr1:156879999|156880157:+_chr1:156881457|156881642:+","UN_NTRK1_LS0008","NTRK1","protein coding gene","yes",22.9,0.31,0,0.003,32,0.001,1,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:156879122|156879362","exon_intersect_chr1:156879999|156880157"]
["chr1:156935296|156935380:+","chr1:156935181|156935296:+_chr1:156935380|156935525:+","UN_ARHGEF11_LS0007","ARHGEF11","protein coding gene","no",2.83,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:156934840|156936058","exon_intersect_chr1:156934840|156936058"]
["chr1:156957846|156958742:-","chr1:156935524|156936058:-_chr1:156936816|156937005:-_chr1:156937249|156937496:-_chr1:156938418|156938513:-_chr1:156939548|156939910:-_chr1:156940207|156940425:-_chr1:156941372|156941433:-_chr1:156941864|156941989:-_chr1:156942690|156942780:-_chr1:156943935|156944102:-_chr1:156944358|156944433:-_chr1:156945019|156945197:-_chr1:156946045|156946162:-_chr1:156946662|156946787:-_chr1:156946936|156947015:-_chr1:156947304|156947450:-_chr1:156947769|156947956:-_chr1:156948181|156948228:-_chr1:156948319|156948498:-_chr1:156951573|156951699:-_chr1:156954892|156954921:-_chr1:156955703|156955799:-_chr1:156956420|156956564:-_chr1:156957792|156957846:-_chr1:156958742|156958864:-_chr1:156959046|156959142:-_chr1:156960418|156960460:-_chr1:156961677|156961775:-_chr1:156963203|156963304:-_chr1:156963520|156963594:-_chr1:156967987|156968124:-_chr1:156969282|156969358:-_chr1:156969998|156970043:-_chr1:156971697|156971816:-_chr1:156976983|156977054:-_chr1:156978204|156978382:-_chr1:156979229|156979286:-_chr1:156980437|156980486:-_chr1:156984339|156984437:-_chr1:156986082|156986173:-_chr1:157044299|157044846:-_chr1:157045133|157045620:-","UN_ARHGEF11_LS0053","ARHGEF11","protein coding gene","no",2.52,0,0,0.007,66,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:156958742|156958864","intron_intersect_chr1:156957815|156958742"]
["chr1:15731257|15732350:+","chr1:15684472|15684618:+_chr1:15716237|15716343:+_chr1:15716707|15716816:+_chr1:15717893|15717992:+_chr1:15718538|15718625:+_chr1:15719734|15719920:+_chr1:15721329|15721388:+_chr1:15725317|15725545:+_chr1:15727014|15727832:+_chr1:15728079|15728148:+_chr1:15728267|15728357:+_chr1:15728669|15728733:+_chr1:15729102|15729190:+_chr1:15729797|15729929:+_chr1:15730532|15730722:+_chr1:15731192|15731257:+_chr1:15732350|15732529:+_chr1:15732612|15732728:+_chr1:15733797|15734769:+","UN_PLEKHM2_LS0025","PLEKHM2","protein coding gene","no",9.32,0,0,0.009,86,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:15731257|15731889","exon_intersect_chr1:15732350|15732529"]
["chr1:157400582|157400901:+","chr1:157400046|157400582:+_chr1:157400901|157416539:+_chr1:157416738|157416829:+_chr1:157417117|157419495:+","UN_AL356276.1_UP_LS0017","AL356276.1","lncRNA gene","no",7.61,0,0,0.005,50,0,0,"0(0)","LAML;OV","no","NA","NA","NA","NA"]
["chr1:157414789|157416407:+","chr1:157400156|157400977:+_chr1:157414493|157414789:+_chr1:157416407|157416829:+_chr1:157417117|157419516:+","UN_AL356276.1_UP_LS0025","AL356276.1","lncRNA gene","no",4.95,0,0,0.003,31,0,0,"0(0)","LAML;OV","no","NA","NA","NA","NA"]
["chr1:157414789|157416738:+","chr1:157399788|157400582:+_chr1:157414493|157414789:+_chr1:157416738|157416829:+_chr1:157417117|157419533:+","UN_AL356276.1_UP_LS0026","AL356276.1","lncRNA gene","no",3.3,0,0,0.005,49,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:157416539|157416738:+","chr1:157400046|157400582:+_chr1:157400901|157416539:+_chr1:157416738|157416829:+_chr1:157417117|157419495:+","UN_AL356276.1_UP_LS0027","AL356276.1","lncRNA gene","no",4.56,0,0,0.003,28,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr1:157416829|157417117:+","chr1:157400083|157416829:+_chr1:157417117|157419480:+","UN_AL356276.1_UP_LS0028","AL356276.1","lncRNA gene","no",3.92,0,0,0.015,140,0,0,"0(0)","LAML;MESO;OV;TGCT","no","NA","NA","NA","NA"]
["chr1:157539364|157540341:-","chr1:157513378|157515764:-_chr1:157515842|157515873:-_chr1:157518429|157518497:-_chr1:157518700|157518782:-_chr1:157519743|157519770:-_chr1:157520431|157520547:-_chr1:157521017|157521292:-_chr1:157523239|157524557:-_chr1:157527617|157527895:-_chr1:157534614|157534892:-_chr1:157539086|157539364:-_chr1:157540341|157540463:-","UN_FCRL5_LS0011","FCRL5","protein coding gene","no",11.74,0,0,0.001,13,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:157539364|157541825","intron_intersect_chr1:157539364|157541825"]
["chr1:157767311|157768414:-","chr1:157745735|157746774:-_chr1:157746871|157746899:-_chr1:157748553|157748618:-_chr1:157748875|157748960:-_chr1:157749650|157749677:-_chr1:157766855|157766971:-_chr1:157767231|157767311:-_chr1:157768414|157770150:-_chr1:157770409|157770666:-_chr1:157775775|157775795:-_chr1:157777043|157777122:-","UN_FCRL2_LS0005","FCRL2","protein coding gene","no",6.17,0,0,0.001,11,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chr1:157767231|157770310","exon_intersect_chr1:157767231|157770310"]
["chr1:157767509|157768271:-","chr1:157745735|157746774:-_chr1:157746871|157746899:-_chr1:157748553|157748618:-_chr1:157748875|157748960:-_chr1:157749650|157749677:-_chr1:157766855|157766971:-_chr1:157767231|157767509:-_chr1:157768271|157770150:-_chr1:157770409|157770666:-_chr1:157775775|157775795:-_chr1:157777043|157777120:-","UN_FCRL2_LS0006","FCRL2","protein coding gene","no",4.73,0,0,0.002,17,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chr1:157767231|157770310","exon_intersect_chr1:157767231|157770310"]
["chr1:157768701|157770409:-","chr1:157745735|157746774:-_chr1:157746871|157746899:-_chr1:157748553|157748618:-_chr1:157748875|157748960:-_chr1:157749650|157749677:-_chr1:157766855|157766971:-_chr1:157767231|157767478:-_chr1:157768414|157768701:-_chr1:157770409|157770666:-_chr1:157775775|157775795:-_chr1:157777043|157777122:-","FCRL2_LS015","FCRL2","protein coding gene","no",6.24,0,0,0.001,12,0,0,"0(0)","DLBC","yes","NA","NA","exon_intersect_chr1:157770409|157770666","exon_intersect_chr1:157767231|157770310"]
["chr1:158086746|158087278:+","chr1:157993610|157993728:+_chr1:158073807|158074003:+_chr1:158076113|158076262:+_chr1:158077991|158078140:+_chr1:158084422|158084579:+_chr1:158086596|158086746:+_chr1:158087278|158087385:+_chr1:158087755|158087860:+_chr1:158088006|158088154:+_chr1:158088327|158088454:+_chr1:158089502|158089628:+_chr1:158089718|158089818:+_chr1:158091358|158091556:+_chr1:158093339|158093446:+_chr1:158093623|158093762:+_chr1:158094313|158094390:+_chr1:158094644|158100262:+","UN_KIRREL1_LS0023","KIRREL1","protein coding gene","no",1.93,0,0,0.004,41,0,0,"0(0)","TGCT","no","NA","TE_intersect_:158087094|chr1|158087094|158087311|MER46C:TcMar-Tigger:DNA|195|+","intron_intersect_chr1:158086746|158087755","intron_intersect_chr1:158086746|158087755"]
["chr1:158102664|158102696:-","chr1:158102579|158102664:-_chr1:158102696|158102845:-","UN_CD5L_UP_LS0003","CD5L","protein coding gene","no",5.1,0,0,0.006,53,0,0,"0(0)","OV","no","TE_intersect_:158102431|chr1|158102431|158102891|LTR7B:ERV1:LTR|54|-","TE_intersect_:158102431|chr1|158102431|158102891|LTR7B:ERV1:LTR|54|-","NA","NA"]
["chr1:158164125|158173221:+","chr1:158163918|158164125:+_chr1:158173221|158173443:+_chr1:158180819|158181162:+_chr1:158181455|158181721:+_chr1:158182032|158182310:+_chr1:158182878|158183156:+_chr1:158183936|158184035:+_chr1:158184129|158184896:+","UN_CD1D_UP_LS0005","CD1D","protein coding gene","no",1.46,0,0,0.004,34,0,0,"0(0)","DLBC","no","TE_intersect_:158164013|chr1|158164013|158164389|L3:CR1:LINE|367|-","NA","NA","NA"]
["chr1:158181909|158182032:+","chr1:158177774|158178068:+_chr1:158180819|158181909:+_chr1:158182032|158183156:+_chr1:158183931|158184035:+_chr1:158184129|158184896:+","UN_CD1D_LS0013","CD1D","protein coding gene","no",3.03,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:158181721|158182032","exon_intersect_chr1:158182032|158182310"]
["chr1:158182177|158182878:+","chr1:158177938|158178068:+_chr1:158180819|158181050:+_chr1:158181455|158181721:+_chr1:158182032|158182177:+_chr1:158182878|158184035:+_chr1:158184129|158184896:+","UN_CD1D_LS0014","CD1D","protein coding gene","no",1.21,0,0,0.002,17,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr1:158182032|158182310","exon_intersect_chr1:158182878|158183156"]
["chr1:158198584|158199713:-","chr1:158190948|158198584:-_chr1:158199713|158199835:-_chr1:158203793|158203877:-","UN_AL138899.1_LS0002","AL138899.1","lncRNA gene","no",4.23,0,0,0.003,31,0,0,"0(0)","THYM","no","TE_intersect_:158199557|chr1|158199557|158199866|AluSq2:Alu:SINE|94|+","TE_intersect_:158198574|chr1|158198574|158198656|LTR81A:Gypsy:LTR|134|+","exon_intersect_chr1:158197922|158199835","exon_intersect_chr1:158197922|158199835"]
["chr1:158283172|158283700:-","chr1:158277323|158283172:-_chr1:158283700|158284071:-","UN_HMGN1P5_UP_LS0001","HMGN1P5","pseudogene","no",2.63,0,0,0.002,16,0,0,"0(0)","THYM","no","TE_intersect_:158283430|chr1|158283430|158284473|Tigger6a:TcMar-Tigger:DNA|214|-","TE_intersect_:158282906|chr1|158282906|158283430|Zaphod2:hAT-Tip100:DNA|258|+","NA","NA"]
["chr1:158483175|158494402:-","chr1:158474456|158474667:-_chr1:158479905|158481802:-_chr1:158483133|158483175:-_chr1:158494402|158494554:-_chr1:158494655|158494717:-","UN_AL365440.2_LS0004","AL365440.2","lncRNA gene","no",3.43,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr1:158494402|158494886","intron_intersect_chr1:158481802|158491219"]
["chr1:158494554|158494781:-","chr1:158474456|158474667:-_chr1:158494402|158494554:-_chr1:158494781|158494960:-","UN_AL365440.2_LS0005","AL365440.2","lncRNA gene","no",9.67,0,0,0.002,21,0,0,"0(0)","THYM","no","TE_intersect_:158494649|chr1|158494649|158494855|Charlie10:hAT-Charlie:DNA|316|-","TE_intersect_:158494536|chr1|158494536|158494642|MER5C1:hAT-Charlie:DNA|208|-","exon_intersect_chr1:158494402|158494886","exon_intersect_chr1:158494402|158494886"]
["chr1:158550424|158558329:+","chr1:158504432|158504446:+_chr1:158550372|158550424:+_chr1:158558329|158559402:+","UN_OR10Z1_UP_LS0003","OR10Z1","protein coding gene","no",2.25,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","TE_intersect_:158558209|chr1|158558209|158558499|HSMAR1:TcMar-Mariner:DNA|84|-","NA","NA"]
["chr1:158686537|158686655:-","chr1:158610706|158611389:-_chr1:158612817|158612961:-_chr1:158613721|158613867:-_chr1:158614253|158614306:-_chr1:158615216|158615403:-_chr1:158617537|158617588:-_chr1:158618039|158618056:-_chr1:158619222|158619334:-_chr1:158620170|158623192:-_chr1:158626146|158626222:-_chr1:158626839|158627007:-_chr1:158627625|158627723:-_chr1:158634543|158634675:-_chr1:158635913|158636034:-_chr1:158636641|158636761:-_chr1:158638033|158638241:-_chr1:158639582|158639686:-_chr1:158639870|158640007:-_chr1:158642411|158642542:-_chr1:158642814|158642976:-_chr1:158643322|158643425:-_chr1:158644253|158644396:-_chr1:158645188|158645385:-_chr1:158645495|158645594:-_chr1:158647539|158647720:-_chr1:158648509|158648653:-_chr1:158649856|158649947:-_chr1:158651367|158651468:-_chr1:158652467|158652653:-_chr1:158653274|158653425:-_chr1:158654611|158654748:-_chr1:158656564|158656656:-_chr1:158657477|158657694:-_chr1:158661287|158661409:-_chr1:158662702|158662945:-_chr1:158666316|158666497:-_chr1:158667858|158668062:-_chr1:158669408|158669563:-_chr1:158669709|158669786:-_chr1:158671343|158671453:-_chr1:158672059|158672196:-_chr1:158674329|158674430:-_chr1:158674540|158674675:-_chr1:158676141|158676295:-_chr1:158677690|158677834:-_chr1:158678401|158678534:-_chr1:158680583|158680729:-_chr1:158681527|158681667:-_chr1:158683371|158683496:-_chr1:158685108|158685347:-_chr1:158686494|158686537:-_chr1:158686655|158686698:-","UN_SPTA1_LS0008","SPTA1","protein coding gene","no",6.62,0,0,0.004,38,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:158686494|158686698","exon_intersect_chr1:158686494|158686698"]
["chr1:15876|185542:-","chr1:14373|14829:-_chr1:14970|15038:-_chr1:15796|15876:-_chr1:185542|185559:-_chr1:186317|186469:-_chr1:187129|187287:-_chr1:187380|187577:-_chr1:187755|188266:-_chr1:188439|188584:-_chr1:188791|188902:-_chr1:195263|195414:-","UN_WASH7P_UP_LS0109","WASH7P","pseudogene","no",6.51,0,0,0.001,14,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:185491|185559","exon_intersect_chr1:15796|15947"]
["chr1:158973771|158973990:+","chr1:158941977|158942399:+_chr1:158943790|158943978:+_chr1:158944875|158973771:+_chr1:158973990|158982190:+","UN_PYHIN1_LS0007","PYHIN1","protein coding gene","yes",5.22,0,0,0.002,20,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:158973771|158976701","intron_intersect_chr1:158973771|158976701"]
["chr1:159013480|159013567:-","chr1:159013341|159013480:-_chr1:159013567|159013646:-","UN_IFI16_LS0008","IFI16","protein coding gene","yes",2.92,0,0,0.019,183,0,0,"0(0)","DLBC;SKCM;STAD","no","NA","NA","intron_intersect_chr1:159010161|159014661","intron_intersect_chr1:159010161|159014661"]
["chr1:159050570|159051246:+","chr1:159010010|159010161:+_chr1:159014661|159014945:+_chr1:159015872|159015987:+_chr1:159016533|159016700:+_chr1:159018229|159018651:+_chr1:159020341|159020529:+_chr1:159032524|159032691:+_chr1:159049432|159050570:+_chr1:159051246|159052098:+_chr1:159053533|159055124:+","UN_IFI16_LS0040","IFI16","protein coding gene","yes",9.22,0,0,0.004,36,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:159049599|159051679","intron_intersect_chr1:159049599|159051679"]
["chr1:15911301|15915956:+","chr1:15873502|15874395:+_chr1:15876202|15876678:+_chr1:15909321|15909481:+_chr1:15911101|15911301:+_chr1:15915956|15916006:+_chr1:15916128|15916279:+_chr1:15918926|15919051:+_chr1:15919404|15919517:+_chr1:15920870|15920983:+_chr1:15922249|15922349:+_chr1:15928091|15936266:+_chr1:15937163|15937645:+_chr1:15937812|15940460:+","UN_SPEN_LS0016","SPEN","protein coding gene","no",6.89,0.06,0,0.002,20,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:15911301|15916128","intron_intersect_chr1:15911301|15916128"]
["chr1:159132356|159187811:-","chr1:159132243|159132356:-_chr1:159187811|159188267:-","UN_RAD1P2_UP_LS0003","RAD1P2","pseudogene","no",2.72,0,0,0.01,95,0,0,"0(0)","DLBC;LGG","no","NA","TE_intersect_:159132066|chr1|159132066|159132397|AluSq2:Alu:SINE|97|+","intron_intersect_chr1:159178559|159189771","intron_intersect_chr1:159132356|159140431"]
["chr1:15916006|15916128:+","chr1:15873502|15874395:+_chr1:15876202|15876678:+_chr1:15909321|15909481:+_chr1:15911101|15911301:+_chr1:15915956|15916006:+_chr1:15916128|15916279:+_chr1:15918926|15919051:+_chr1:15919404|15919517:+_chr1:15920870|15920983:+_chr1:15922249|15922349:+_chr1:15928091|15936266:+_chr1:15937163|15937645:+_chr1:15937812|15940460:+","UN_SPEN_LS0019","SPEN","protein coding gene","no",1.7,0,0,0.002,17,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:15911301|15916128","exon_intersect_chr1:15916128|15916279"]
["chr1:159189872|159190670:+","chr1:159171609|159171853:+_chr1:159176129|159176250:+_chr1:159189771|159189872:+_chr1:159190670|159190761:+_chr1:159191534|159191588:+_chr1:159191936|159192076:+_chr1:159192578|159192730:+_chr1:159193423|159193560:+_chr1:159193870|159194040:+_chr1:159196364|159196454:+_chr1:159196891|159197060:+_chr1:159199751|159199876:+_chr1:159200804|159204980:+_chr1:159205461|159206498:+","UN_CADM3_LS0007","CADM3","protein coding gene","yes",2.65,0,0,0.005,46,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:159189872|159191936","intron_intersect_chr1:159189872|159191936"]
["chr1:159190761|159191534:+","chr1:159171609|159171853:+_chr1:159176129|159176250:+_chr1:159189771|159189872:+_chr1:159190670|159190761:+_chr1:159191534|159191588:+_chr1:159191936|159192076:+_chr1:159192578|159192730:+_chr1:159193423|159193560:+_chr1:159193870|159194040:+_chr1:159196364|159196454:+_chr1:159196891|159197060:+_chr1:159199751|159199876:+_chr1:159200804|159204980:+_chr1:159205461|159206498:+","UN_CADM3_LS0009","CADM3","protein coding gene","yes",4.61,0,0,0.006,55,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:159189872|159191936","intron_intersect_chr1:159189872|159191936"]
["chr1:159191588|159191936:+","chr1:159171609|159171853:+_chr1:159176129|159176250:+_chr1:159189771|159189872:+_chr1:159190670|159190761:+_chr1:159191534|159191588:+_chr1:159191936|159192076:+_chr1:159192578|159192730:+_chr1:159193423|159193560:+_chr1:159193870|159194040:+_chr1:159196364|159196454:+_chr1:159196891|159197060:+_chr1:159199751|159199876:+_chr1:159200804|159204980:+_chr1:159205461|159206498:+","UN_CADM3_LS0010","CADM3","protein coding gene","yes",3.39,0,0,0.008,77,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:159189872|159191936","exon_intersect_chr1:159191936|159192076"]
["chr1:159193560|159196364:+","chr1:159171609|159171853:+_chr1:159191940|159192076:+_chr1:159192578|159192730:+_chr1:159193423|159193560:+_chr1:159196364|159196454:+_chr1:159196891|159197060:+_chr1:159199751|159199876:+_chr1:159200804|159202012:+","UN_CADM3_LS0013","CADM3","protein coding gene","yes",3.82,0,0,0.002,20,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:159193560|159193870","exon_intersect_chr1:159194325|159198221"]
["chr1:159283896|159289716:+","chr1:159283503|159283896:+_chr1:159289716|159289753:+_chr1:159302306|159302419:+_chr1:159302854|159302874:+_chr1:159303928|159304182:+_chr1:159305988|159306245:+_chr1:159307748|159308212:+","UN_OR10J7P_UP_LS0001","OR10J7P","pseudogene","no",4.64,0.04,0,0.006,54,0.003,2,"0(0)","ACC","no","NA","NA","NA","exon_intersect_chr1:159289714|159289753"]
["chr1:159468156|159473568:+","chr1:159465576|159466623:+_chr1:159468080|159468156:+_chr1:159473568|159474113:+","UN_AL663023.1_LS0002","AL663023.1","lncRNA gene","no",3.35,0,0,0.002,23,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr1:159468156|159468842","intron_intersect_chr1:159469068|159482904"]
["chr1:159468156|159481380:+","chr1:159465461|159465494:+_chr1:159468080|159468156:+_chr1:159481380|159481565:+","UN_AL663023.1_LS0003","AL663023.1","lncRNA gene","no",2.13,0,0,0.002,23,0,0,"0(0)","LIHC","no","NA","TE_intersect_:159481205|chr1|159481205|159481615|MLT1C:ERVL-MaLR:LTR|241|+","intron_intersect_chr1:159468156|159468842","intron_intersect_chr1:159469068|159482904"]
["chr1:159600420|159603594:+","chr1:159598298|159598774:+_chr1:159600355|159600420:+_chr1:159603594|159610130:+","UN_AL445528.2_UP_LS0004","AL445528.2","pseudogene","no",2.99,0.13,0,0.003,25,0.001,1,"0(0)","CHOL","no","NA","TE_intersect_:159603446|chr1|159603446|159603723|MIRc:MIR:SINE|329|-","NA","NA"]
["chr1:159712794|159714003:-","chr1:159712284|159712794:-_chr1:159714003|159714138:-_chr1:159714425|159714683:-","CRP_LS007","CRP","protein coding gene","no",58.15,0,0,0.002,16,0,0,"0(0)","CHOL","yes","NA","NA","exon_intersect_chr1:159712289|159714138","exon_intersect_chr1:159712289|159714138"]
["chr1:159713640|159714003:-","chr1:159712410|159713640:-_chr1:159714003|159714080:-","CRP_LS013","CRP","protein coding gene","no",63.13,0,0,0.001,7,0,0,"0(0)","CHOL","yes","NA","NA","exon_intersect_chr1:159712289|159714138","exon_intersect_chr1:159712289|159714138"]
["chr1:159781126|159781200:-","chr1:159781001|159781126:-_chr1:159781200|159781312:-","UN_DUSP23_LS0002","DUSP23","protein coding gene","no",1.46,0,0,0.002,21,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:159781003|159781367","exon_intersect_chr1:159781003|159781367"]
["chr1:159823011|159826250:-","chr1:159820668|159823011:-_chr1:159826250|159826379:-","UN_CRP_UP_LS0011","CRP","protein coding gene","no",1.18,0,0,0.005,49,0,0,"0(0)","DLBC;TGCT","no","TE_intersect_:159826067|chr1|159826067|159826436|L2c:L2:LINE|307|-","NA","NA","NA"]
["chr1:159833369|159836630:+","chr1:159833005|159833181:+_chr1:159833262|159833369:+_chr1:159836630|159837249:+","SLAMF8_LS010","SLAMF8","protein coding gene","no",7.67,0.05,0,0.005,47,0.001,1,"0(0)","DLBC","yes","NA","NA","intron_intersect_chr1:159833369|159834474","exon_intersect_chr1:159835184|159837249"]
["chr1:1598435|1598575:+","chr1:1598285|1598435:+_chr1:1598575|1598750:+_chr1:1599303|1599353:+","UN_FNDC10_LS0026","FNDC10","protein coding gene","no",2.37,0,0,0.004,39,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1598012|1600096","exon_intersect_chr1:1598012|1600096"]
["chr1:159858912|159866005:-","chr1:159854420|159856081:-_chr1:159856524|159856643:-_chr1:159857745|159857966:-_chr1:159858090|159858291:-_chr1:159858734|159858912:-_chr1:159866005|159866948:-","UN_SNHG28_LS0033","SNHG28","lncRNA gene","no",2.63,0,0,0.003,33,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:159862657|159866954","intron_intersect_chr1:159858912|159862473"]
["chr1:159860844|159861079:+","chr1:159854870|159854968:+_chr1:159855910|159856103:+_chr1:159860646|159860844:+_chr1:159861079|159862454:+","AL590560.1_LS003","AL590560.1","lncRNA gene","no",2.03,0,0,0.003,32,0,0,"0(0)","OV","yes","NA","NA","intron_intersect_chr1:159858912|159862473","intron_intersect_chr1:159858912|159862473"]
["chr1:159866382|159889613:+","chr1:159862659|159866382:+_chr1:159889613|159889793:+_chr1:159892347|159894139:+","UN_LINC01133_UP_LS0003","LINC01133","lncRNA gene","no",3.83,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:159862657|159866954","intron_intersect_chr1:159888496|159890480"]
["chr1:159918177|159918513:+","chr1:159918132|159918177:+_chr1:159918513|159918922:+","UN_TAGLN2_LS0024","TAGLN2","protein coding gene","no",4.6,0,0,0.009,84,0,0,"0(0)","BLCA","no","NA","NA","exon_intersect_chr1:159918107|159919376","exon_intersect_chr1:159918107|159919376"]
["chr1:159918315|159918422:+","chr1:159918107|159918315:+_chr1:159918422|159918657:+_chr1:159918806|159918946:+","UN_TAGLN2_LS0065","TAGLN2","protein coding gene","no",79,0,0,0.008,76,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","exon_intersect_chr1:159918107|159919376","exon_intersect_chr1:159918107|159919376"]
["chr1:159918331|159918367:+","chr1:159918147|159918331:+_chr1:159918367|159918602:+","UN_TAGLN2_LS0067","TAGLN2","protein coding gene","no",54.67,0,0,0.014,138,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:159918107|159919376","exon_intersect_chr1:159918107|159919376"]
["chr1:159918415|159918499:+","chr1:159918193|159918415:+_chr1:159918499|159918793:+_chr1:159919671|159920465:+","UN_TAGLN2_LS0101","TAGLN2","protein coding gene","no",26.82,0,0,0.005,51,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:159918107|159919376","exon_intersect_chr1:159918107|159919376"]
["chr1:159918573|159918658:+","chr1:159918109|159918173:+_chr1:159918416|159918573:+_chr1:159918658|159918816:+","UN_TAGLN2_LS0147","TAGLN2","protein coding gene","no",20.3,0,0,0.005,51,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:159918107|159919376","exon_intersect_chr1:159918107|159919376"]
["chr1:1599213|1599303:+","chr1:1597968|1598266:+_chr1:1598468|1598626:+_chr1:1598705|1598787:+_chr1:1598922|1599213:+_chr1:1599303|1599409:+_chr1:1599617|1599935:+","UN_FNDC10_LS0042","FNDC10","protein coding gene","no",2.95,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1598012|1600096","exon_intersect_chr1:1598012|1600096"]
["chr1:159943628|159944058:-","chr1:159927039|159927526:-_chr1:159927760|159927887:-_chr1:159928158|159929018:-_chr1:159929351|159929393:-_chr1:159929638|159929814:-_chr1:159929891|159929975:-_chr1:159930189|159930439:-_chr1:159930692|159930867:-_chr1:159931138|159931261:-_chr1:159931453|159931603:-_chr1:159931812|159931928:-_chr1:159932512|159932652:-_chr1:159934190|159934284:-_chr1:159934425|159934570:-_chr1:159934681|159934822:-_chr1:159936399|159936516:-_chr1:159936754|159936908:-_chr1:159937686|159937838:-_chr1:159942963|159943151:-_chr1:159943397|159943628:-_chr1:159944058|159944114:-","UN_IGSF9_LS0053","IGSF9","protein coding gene","no",2.44,0,0,0.005,48,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:159943628|159945573","intron_intersect_chr1:159943628|159945573"]
["chr1:159961405|160022783:+","chr1:159961224|159961405:+_chr1:160022783|160022889:+_chr1:160057205|160057398:+_chr1:160063489|160063589:+_chr1:160064736|160064917:+_chr1:160079584|160080853:+","UN_AL121987.1_UP_LS0001","AL121987.1","lncRNA gene","no",5.28,0,0,0.002,18,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:159961405|159965499","NA"]
["chr1:160048348|160057205:+","chr1:159961224|159961405:+_chr1:159965499|159965645:+_chr1:159976644|159976984:+_chr1:159977007|159977112:+_chr1:159978600|159978715:+_chr1:160020300|160020353:+_chr1:160022783|160022889:+_chr1:160037270|160037403:+_chr1:160048163|160048348:+_chr1:160057205|160057398:+_chr1:160063489|160063589:+_chr1:160064736|160064850:+_chr1:160064984|160065031:+_chr1:160079584|160080840:+","UN_KCNJ10_LS0030","KCNJ10","protein coding gene","no",1.6,0,0,0.002,16,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:160042532|160062488","intron_intersect_chr1:160042532|160062488"]
["chr1:160057398|160060729:+","chr1:159961224|159961405:+_chr1:159965499|159965645:+_chr1:160022783|160022889:+_chr1:160057205|160057398:+_chr1:160060729|160060775:+_chr1:160063489|160063589:+_chr1:160064736|160064850:+_chr1:160064984|160065031:+_chr1:160079584|160080901:+","UN_KCNJ10_LS0031","KCNJ10","protein coding gene","no",1.6,0,0,0.002,17,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:160042532|160062488","intron_intersect_chr1:160042532|160062488"]
["chr1:160064917|160079584:+","chr1:159961224|159961405:+_chr1:160022783|160022889:+_chr1:160057205|160057398:+_chr1:160063489|160063589:+_chr1:160064736|160064917:+_chr1:160079584|160080853:+","UN_AL121987.1_LS0002","AL121987.1","lncRNA gene","no",2.18,0,0,0.006,54,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:160064850|160064984","exon_intersect_chr1:160079584|160079821"]
["chr1:160081697|160083926:+","chr1:160081570|160081697:+_chr1:160083926|160084880:+_chr1:160087486|160090563:+","UN_KCNJ9_LS0004","KCNJ9","protein coding gene","no",0.98,0,0,0.007,70,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:160081697|160083917","exon_intersect_chr1:160083917|160084880"]
["chr1:16013287|16014779:+","chr1:16013040|16013287:+_chr1:16014779|16014963:+","UN_CLCNKA_UP_LS0003","CLCNKA","protein coding gene","no",1.77,0,0,0.003,26,0,0,"0(0)","KICH","no","NA","NA","NA","exon_intersect_chr1:16014028|16015759"]
["chr1:160190449|160193139:-","chr1:160186974|160187345:-_chr1:160188924|160189124:-_chr1:160190227|160190449:-_chr1:160193139|160193230:-","UN_IGSF8_UP_LS0009","IGSF8","protein coding gene","no",1.65,0,0,0.004,42,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:160192886|160193747","NA"]
["chr1:160206376|160210421:-","chr1:160205409|160206376:-_chr1:160210421|160210542:-_chr1:160213408|160213482:-_chr1:160214134|160214256:-_chr1:160217578|160217708:-_chr1:160218324|160218440:-_chr1:160218849|160218968:-_chr1:160222651|160222781:-_chr1:160224442|160224549:-_chr1:160225062|160225119:-_chr1:160225591|160225663:-_chr1:160231297|160231407:-_chr1:160237135|160237229:-_chr1:160238607|160238747:-_chr1:160239697|160240370:-_chr1:160243960|160244034:-_chr1:160261285|160261358:-_chr1:160262276|160262407:-","UN_PEA15_LS0009","PEA15","protein coding gene","yes",1.61,0,0,0.003,31,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:160208869|160211287","intron_intersect_chr1:160206376|160207133"]
["chr1:160213596|160213745:+","chr1:160205421|160205522:+_chr1:160211543|160211716:+_chr1:160213110|160213265:+_chr1:160213422|160213596:+_chr1:160213745|160215376:+","UN_PEA15_LS0041","PEA15","protein coding gene","yes",43.12,3.46,0,0.006,60,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:160213422|160215376","exon_intersect_chr1:160213422|160215376"]
["chr1:160214133|160214575:-","chr1:160201956|160202516:-_chr1:160205071|160205134:-_chr1:160205343|160205463:-_chr1:160213473|160213842:-_chr1:160213939|160214133:-_chr1:160214575|160214805:-","UN_PEA15_LS0090","PEA15","protein coding gene","yes",7.18,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:160213422|160215376","exon_intersect_chr1:160213422|160215376"]
["chr1:160214543|160214938:-","chr1:160213813|160213952:-_chr1:160214426|160214543:-_chr1:160214938|160214979:-_chr1:160215016|160215161:-","UN_PEA15_LS0114","PEA15","protein coding gene","yes",6.24,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:160213422|160215376","exon_intersect_chr1:160213422|160215376"]
["chr1:160214546|160214976:-","chr1:160213275|160213952:-_chr1:160214130|160214546:-_chr1:160214976|160215220:-","UN_PEA15_LS0116","PEA15","protein coding gene","yes",24.2,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:160213422|160215376","exon_intersect_chr1:160213422|160215376"]
["chr1:160221808|160222651:-","chr1:160217486|160217708:-_chr1:160218324|160218440:-_chr1:160218849|160218968:-_chr1:160220459|160221808:-_chr1:160222651|160222781:-_chr1:160224442|160224528:-","UN_AL139011.2_LS0032","AL139011.2","protein coding gene","no",2.81,0,0,0.003,31,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:160222651|160222781","intron_intersect_chr1:160221210|160222651"]
["chr1:160278846|160278890:+","chr1:160278733|160278846:+_chr1:160278890|160279088:+","UN_PEX19_LS0012","PEX19","protein coding gene","no",4.25,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:160276812|160279845","exon_intersect_chr1:160276812|160279845"]
["chr1:160278846|160282423:+","chr1:160278687|160278846:+_chr1:160282423|160282496:+","UN_PEX19_LS0015","PEX19","protein coding gene","no",0.91,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:160276812|160279845","exon_intersect_chr1:160282039|160282519"]
["chr1:160289805|160289869:+","chr1:160289636|160289805:+_chr1:160289869|160290052:+","UN_COPA_LS0013","COPA","protein coding gene","no",4.95,0,0,0.003,28,0,0,"0(0)","OV","no","TE_intersect_:160289588|chr1|160289588|160289890|AluSz6:Alu:SINE|142|-","TE_intersect_:160289588|chr1|160289588|160289890|AluSz6:Alu:SINE|142|-","exon_intersect_chr1:160289273|160290216","exon_intersect_chr1:160289273|160290216"]
["chr1:1603085|1603629:+","chr1:1600304|1603085:+_chr1:1603629|1604291:+","UN_MIB2_UP_LS0015","MIB2","protein coding gene","no",0.88,0,0,0.003,32,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr1:16036346|16062099:-","chr1:16034571|16035458:-_chr1:16036236|16036346:-_chr1:16062099|16062192:-_chr1:16062499|16062534:-_chr1:16063521|16063636:-_chr1:16072292|16072335:-","UN_HSPB7_UP_LS0025","HSPB7","protein coding gene","yes",2.4,0,0,0.019,178,0,0,"0(0)","ACC;ESCA;KIRP;LUSC;OV","no","NA","NA","exon_intersect_chr1:16062099|16062192","intron_intersect_chr1:16036346|16036612"]
["chr1:16039669|16062166:+","chr1:16039602|16039669:+_chr1:16062166|16062319:+","UN_AL451042.2_UP_LS0020","AL451042.2","lncRNA gene","no",3.22,0,0,0.011,109,0,0,"0(0)","ACC;LGG","no","NA","NA","exon_intersect_chr1:16039603|16039696","exon_intersect_chr1:16062099|16062192"]
["chr1:16039696|16039790:-","chr1:16034831|16035458:-_chr1:16036236|16036346:-_chr1:16036612|16036793:-_chr1:16039603|16039696:-_chr1:16039790|16039889:-","UN_AL355994.2_LS0010","AL355994.2","pseudogene","no",1.38,0,0,0.002,21,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:16039696|16039994","intron_intersect_chr1:16039696|16039994"]
["chr1:16040029|16049098:-","chr1:16034511|16035458:-_chr1:16036236|16036346:-_chr1:16036612|16036793:-_chr1:16039603|16039696:-_chr1:16039994|16040029:-_chr1:16049098|16049187:-","UN_AL355994.2_UP_LS0002","AL355994.2","pseudogene","no",1.31,0,0,0.005,49,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:16048789|16049245","NA"]
["chr1:16045704|16046535:+","chr1:16022014|16022063:+_chr1:16022613|16022719:+_chr1:16023800|16023928:+_chr1:16024763|16024891:+_chr1:16026108|16026247:+_chr1:16026536|16026613:+_chr1:16026697|16026775:+_chr1:16027310|16027435:+_chr1:16027821|16027905:+_chr1:16028018|16028119:+_chr1:16028761|16028845:+_chr1:16029126|16029299:+_chr1:16029731|16029800:+_chr1:16029965|16030075:+_chr1:16030461|16030674:+_chr1:16031710|16031843:+_chr1:16032203|16032291:+_chr1:16032446|16032526:+_chr1:16033170|16033256:+_chr1:16033611|16034125:+_chr1:16044486|16044592:+_chr1:16045558|16045704:+_chr1:16046535|16046663:+_chr1:16047905|16048056:+_chr1:16048343|16048420:+_chr1:16048504|16048582:+_chr1:16049120|16049245:+_chr1:16049618|16049702:+_chr1:16049815|16049916:+_chr1:16050516|16050600:+_chr1:16050875|16051048:+_chr1:16051478|16051547:+_chr1:16051710|16051820:+_chr1:16052198|16052411:+_chr1:16053639|16053772:+_chr1:16055435|16055523:+_chr1:16055675|16055758:+_chr1:16056422|16056508:+_chr1:16056869|16057308:+","UN_CLCNKB_LS0008","CLCNKB","protein coding gene","no",236.8,7.79,0,0.001,12,0.001,1,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:16045686|16046535","exon_intersect_chr1:16046535|16046663"]
["chr1:160549979|160550611:-","chr1:160548247|160548321:-_chr1:160549917|160549979:-_chr1:160550611|160551035:-_chr1:160553378|160554146:-_chr1:160565404|160565745:-_chr1:160579392|160579473:-","UN_CD84_LS0002","CD84","protein coding gene","no",2.15,0.03,0,0.013,124,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:160549979|160550938","intron_intersect_chr1:160549979|160550938"]
["chr1:160553497|160553869:-","chr1:160548247|160548321:-_chr1:160549917|160549979:-_chr1:160550938|160551035:-_chr1:160553378|160553497:-_chr1:160553869|160554146:-_chr1:160565404|160565745:-_chr1:160579392|160579473:-","UN_CD84_LS0006","CD84","protein coding gene","no",1.15,0,0,0.002,20,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:160553746|160554146","intron_intersect_chr1:160553497|160553746"]
["chr1:16062192|16062286:-","chr1:16057769|16058717:-_chr1:16059494|16059604:-_chr1:16059869|16060051:-_chr1:16062099|16062192:-_chr1:16062286|16062331:-","UN_FAM131C_LS0004","FAM131C","protein coding gene","no",2.86,0,0,0.007,64,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:16062192|16062499","intron_intersect_chr1:16062192|16062499"]
["chr1:160634892|160637191:-","chr1:160608105|160610798:-_chr1:160612488|160612580:-_chr1:160619776|160619849:-_chr1:160624096|160624185:-_chr1:160634613|160634892:-_chr1:160637191|160637529:-_chr1:160646870|160647021:-","UN_SLAMF1_LS0005","SLAMF1","protein coding gene","no",5.2,0,0,0.005,49,0,0,"0(0)","DLBC;THYM","no","NA","NA","exon_intersect_chr1:160637011|160637529","exon_intersect_chr1:160634613|160634897"]
["chr1:160647335|160647473:+","chr1:160647160|160647335:+_chr1:160647473|160647581:+_chr1:160678943|160679055:+_chr1:160683599|160683785:+_chr1:160684955|160685101:+_chr1:160686609|160686693:+_chr1:160698955|160699927:+","UN_SETP9_UP_LS0001","SETP9","pseudogene","no",3.02,0,0,0.003,30,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:160691861|160697236:+","chr1:160691593|160691861:+_chr1:160697236|160699948:+","UN_CD48_LS0005","CD48","protein coding gene","no",10.93,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:160691753|chr1|160691753|160697338|HERVK-int:ERVK:LTR|90|+","TE_intersect_:160691753|chr1|160691753|160697338|HERVK-int:ERVK:LTR|90|+","exon_intersect_chr1:160691695|160692240","intron_intersect_chr1:160692240|160698955"]
["chr1:160691861|160698955:+","chr1:160691760|160691861:+_chr1:160698955|160699070:+","UN_CD48_LS0008","CD48","protein coding gene","no",3.31,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:160691753|chr1|160691753|160697338|HERVK-int:ERVK:LTR|90|+","TE_intersect_:160698953|chr1|160698953|160699047|SVA_F:SVA:Retroposon|114|+","exon_intersect_chr1:160691695|160692240","exon_intersect_chr1:160698955|160699761"]
["chr1:160773932|160775948:-","chr1:160773537|160773932:-_chr1:160775948|160776648:-_chr1:160789795|160789857:-","UN_CD48_UP_LS0002","CD48","protein coding gene","no",2.53,0,0,0.002,19,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:160824289|160827748:+","chr1:160823460|160823796:+_chr1:160824181|160824289:+_chr1:160827748|160828255:+","UN_LY9_LS0012","LY9","protein coding gene","no",2.94,0,0,0.003,33,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:160824249|160827748","exon_intersect_chr1:160827748|160828261"]
["chr1:160828944|160829591:+","chr1:160796174|160796311:+_chr1:160797110|160797275:+_chr1:160799753|160800082:+_chr1:160813636|160813911:+_chr1:160814420|160814761:+_chr1:160818218|160818319:+_chr1:160819321|160819374:+_chr1:160823465|160823796:+_chr1:160824181|160824249:+_chr1:160827748|160828944:+_chr1:160829591|160829758:+","UN_PPIAP37_UP_LS0001","PPIAP37","pseudogene","no",0.81,0,0,0.002,21,0,0,"0(0)","STAD","no","TE_intersect_:160828921|chr1|160828921|160829118|L1ME4b:L1:LINE|256|+","NA","NA","NA"]
["chr1:160955086|160957093:-","chr1:160945094|160945292:-_chr1:160947929|160948032:-_chr1:160950046|160950166:-_chr1:160950553|160950711:-_chr1:160951043|160951365:-_chr1:160952620|160952730:-_chr1:160954387|160954450:-_chr1:160954727|160954846:-_chr1:160954943|160955086:-_chr1:160957093|160957378:-_chr1:160963618|160967875:-_chr1:160981713|160984286:-","UN_ITLN2_UP_LS0004","ITLN2","protein coding gene","no",5.06,0,0,0.005,48,0,0,"0(0)","LIHC","no","NA","NA","NA","NA"]
["chr1:160957378|160960538:-","chr1:160944972|160945292:-_chr1:160947929|160948032:-_chr1:160950046|160950166:-_chr1:160950553|160950711:-_chr1:160951043|160951290:-_chr1:160952620|160952733:-_chr1:160954387|160954450:-_chr1:160954727|160954846:-_chr1:160954943|160955086:-_chr1:160957093|160957378:-_chr1:160960538|160960655:-_chr1:160961486|160961545:-","UN_ITLN2_UP_LS0005","ITLN2","protein coding gene","no",2.16,0,0,0.004,42,0,0,"0(0)","LIHC","no","TE_intersect_:160960511|chr1|160960511|160960683|AluJb:Alu:SINE|157|+","TE_intersect_:160957273|chr1|160957273|160957491|LTR88b:Gypsy?:LTR|298|-","NA","NA"]
["chr1:160996624|160998525:+","chr1:160960200|160960225:+_chr1:160996537|160996624:+_chr1:160998525|160998746:+","UN_F11R_LS0041","F11R","protein coding gene","no",2.2,0,0,0.002,23,0,0,"0(0)","ESCA","no","TE_intersect_:160996485|chr1|160996485|160996764|AluSg:Alu:SINE|100|+","NA","exon_intersect_chr1:160995211|160998906","exon_intersect_chr1:160995211|160998906"]
["chr1:161049453|161053128:+","chr1:161049410|161049453:+_chr1:161053128|161053314:+","UN_ARHGAP30_LS0020","ARHGAP30","protein coding gene","no",1.3,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:161049424|161049689","exon_intersect_chr1:161052626|161053385"]
["chr1:161074373|161074586:-","chr1:161070995|161072885:-_chr1:161073720|161073795:-_chr1:161074217|161074373:-_chr1:161074586|161074759:-_chr1:161076355|161076475:-_chr1:161077453|161077743:-_chr1:161079590|161079949:-_chr1:161089218|161089599:-","UN_NECTIN4_LS0009","NECTIN4","protein coding gene","yes",5.26,0,0,0.015,141,0,0,"0(0)","CHOL;HNSC;LUSC","no","NA","NA","intron_intersect_chr1:161074373|161074611","intron_intersect_chr1:161074373|161074611"]
["chr1:161115661|161116660:+","chr1:161115504|161115661:+_chr1:161116660|161116841:+","UN_PFDN2_LS0005","PFDN2","protein coding gene","no",3.08,0,0,0.016,152,0,0,"0(0)","LIHC;LUSC","no","TE_intersect_:161115363|chr1|161115363|161115875|MER44D:TcMar-Tigger:DNA|138|+","NA","intron_intersect_chr1:161102375|161117952","intron_intersect_chr1:161102375|161117952"]
["chr1:161167234|161167995:+","chr1:161166482|161166672:+_chr1:161166840|161166934:+_chr1:161167100|161167234:+_chr1:161167995|161168127:+_chr1:161168413|161168576:+_chr1:161168993|161169183:+_chr1:161169660|161169720:+_chr1:161169906|161169985:+","PPOX_LS007","PPOX","protein coding gene","no",3.45,0,0,0.004,35,0,0,"0(0)","STAD","yes","NA","NA","exon_intersect_chr1:161167100|161167486","exon_intersect_chr1:161167995|161168576"]
["chr1:16132835|16132879:+","chr1:16132648|16132835:+_chr1:16132879|16132991:+","UN_EPHA2_LS0042","EPHA2","protein coding gene","yes",13.28,0,0,0.004,42,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:16132439|16133013","intron_intersect_chr1:16132439|16133013"]
["chr1:161390232|161390650:+","chr1:161390190|161390232:+_chr1:161390650|161390861:+","UN_AL592295.4_UP_LS0009","AL592295.4","lncRNA gene","no",2.54,0,0,0.005,49,0,0,"0(0)","OV","no","NA","TE_intersect_:161390598|chr1|161390598|161390681|L1ME4b:L1:LINE|301|-","NA","NA"]
["chr1:161397863|161398955:+","chr1:161397741|161397863:+_chr1:161398955|161399912:+_chr1:161421932|161425809:+","UN_AL592295.4_UP_LS0018","AL592295.4","lncRNA gene","no",0.6,0,0,0.002,22,0,0,"0(0)","TGCT","no","TE_intersect_:161397719|chr1|161397719|161398000|AluSz6:Alu:SINE|114|-","NA","NA","NA"]
["chr1:161421116|161421932:+","chr1:161420724|161421116:+_chr1:161421932|161425699:+","UN_AL592295.4_LS0013","AL592295.4","lncRNA gene","no",1.35,0,0,0.004,34,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:161423392|161423695:-","chr1:161423337|161423392:-_chr1:161423695|161425698:-","UN_AL592295.3_LS0011","AL592295.3","lncRNA gene","no",1.07,0,0,0.003,28,0,0,"0(0)","ESCA","no","TE_intersect_:161422258|chr1|161422258|161424316|SVA_D:SVA:Retroposon|80|+","TE_intersect_:161422258|chr1|161422258|161424316|SVA_D:SVA:Retroposon|80|+","NA","NA"]
["chr1:161423625|161423674:+","chr1:161398953|161399912:+_chr1:161421932|161423625:+_chr1:161423674|161425698:+","UN_AL592295.3_LS0017","AL592295.3","lncRNA gene","no",8.23,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:161422258|chr1|161422258|161424316|SVA_D:SVA:Retroposon|80|+","TE_intersect_:161422258|chr1|161422258|161424316|SVA_D:SVA:Retroposon|80|+","NA","NA"]
["chr1:16150963|16154797:-","chr1:16124336|16125320:-_chr1:16129434|16129589:-_chr1:16130226|16130419:-_chr1:16131721|16131870:-_chr1:16132064|16132273:-_chr1:16132378|16132439:-_chr1:16133180|16133368:-_chr1:16133481|16133606:-_chr1:16133860|16133915:-_chr1:16134468|16134567:-_chr1:16135036|16135189:-_chr1:16135655|16135768:-_chr1:16137853|16138185:-_chr1:16138275|16138430:-_chr1:16148378|16149047:-_chr1:16150896|16150963:-_chr1:16154797|16155034:-","UN_EPHA2_LS0070","EPHA2","protein coding gene","yes",0.97,0,0,0.003,25,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:16150963|16155211","intron_intersect_chr1:16150963|16155211"]
["chr1:161519115|161519589:+","chr1:161505459|161505552:+_chr1:161505987|161506007:+_chr1:161506337|161506591:+_chr1:161509820|161510074:+_chr1:161510834|161510956:+_chr1:161513895|161513932:+_chr1:161517975|161519115:+_chr1:161519589|161519626:+_chr1:161599687|161601364:+_chr1:161604943|161605089:+_chr1:161605287|161605662:+","UN_FCGR2A_LS0021","FCGR2A","protein coding gene","no",4.22,0,0,0.007,69,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr1:161517975|161519568","exon_intersect_chr1:161519589|161519713"]
["chr1:161548675|161629959:-","chr1:161541855|161543199:-_chr1:161544701|161544958:-_chr1:161548421|161548675:-_chr1:161629959|161630035:-_chr1:161630368|161630388:-_chr1:161631055|161631126:-","UN_RPS23P10_UP_LS0135","RPS23P10","pseudogene","no",21.45,0.24,0,0.004,34,0.001,1,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:161629778|161630388","exon_intersect_chr1:161548421|161548678"]
["chr1:161549758|161623846:-","chr1:161541757|161543199:-_chr1:161544701|161544958:-_chr1:161548421|161548675:-_chr1:161549011|161549031:-_chr1:161549697|161549758:-_chr1:161623846|161624639:-_chr1:161626145|161626402:-_chr1:161629778|161630035:-_chr1:161630368|161630388:-_chr1:161631055|161631138:-_chr1:161631886|161631944:-","UN_RPS23P10_UP_LS0165","RPS23P10","pseudogene","no",2.94,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:161623196|161624639","exon_intersect_chr1:161549697|161550028"]
["chr1:16155755|16168176:+","chr1:16155211|16155755:+_chr1:16168176|16168895:+","UN_ARHGEF19-AS1_UP_LS0001","ARHGEF19-AS1","lncRNA gene","no",1.97,0,0,0.005,47,0,0,"0(0)","OV","no","NA","TE_intersect_:16168153|chr1|16168153|16168327|AluJo:Alu:SINE|149|-","intron_intersect_chr1:16155755|16155848","NA"]
["chr1:161595186|161595553:+","chr1:161594992|161595186:+_chr1:161595553|161595590:+_chr1:161599630|161601364:+_chr1:161604943|161605099:+","UN_AL590385.2_LS0066","AL590385.2","lncRNA gene","no",5.75,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:161594904|161595553","exon_intersect_chr1:161595553|161596243"]
["chr1:161595384|161595553:+","chr1:161594835|161595384:+_chr1:161595553|161595590:+_chr1:161599630|161601364:+_chr1:161604943|161605099:+","UN_AL590385.2_LS0067","AL590385.2","lncRNA gene","no",2.55,0,0,0.006,60,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:161594904|161595553","exon_intersect_chr1:161595553|161596243"]
["chr1:161707343|161710478:+","chr1:161707295|161707343:+_chr1:161710478|161710492:+_chr1:161710760|161710912:+_chr1:161711208|161711474:+_chr1:161711934|161712218:+_chr1:161713085|161713452:+","UN_FCRLA_LS0001","FCRLA","protein coding gene","no",4.57,0.14,0,0.002,17,0.003,2,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:161707343|161710289","exon_intersect_chr1:161710289|161710912"]
["chr1:161726087|161727247:+","chr1:161725309|161726087:+_chr1:161727247|161728142:+","FCRLB_LS014","FCRLB","protein coding gene","no",1.68,0,0,0.006,59,0,0,"0(0)","OV","yes","NA","NA","exon_intersect_chr1:161725821|161726993","exon_intersect_chr1:161727247|161728143"]
["chr1:161729047|161736629:-","chr1:161728461|161729047:-_chr1:161736629|161736721:-","UN_RPL31P11_UP_LS0002","RPL31P11","pseudogene","no",2.63,0,0,0.008,80,0,0,"0(0)","BLCA","no","TE_intersect_:161736624|chr1|161736624|161736756|LTR78:ERV1:LTR|282|+","NA","NA","NA"]
["chr1:161983423|161983596:-","chr1:161983193|161983423:-_chr1:161983596|161984276:-_chr1:161984804|161984980:-_chr1:161997825|161998349:-_chr1:162000113|162000338:-_chr1:162006297|162006473:-_chr1:162017400|162017507:-_chr1:162019919|162020182:-_chr1:162023257|162023640:-","UN_OLFML2B_LS0001","OLFML2B","protein coding gene","no",4.37,0,0,0.005,45,0,0,"0(0)","SARC","no","NA","NA","exon_intersect_chr1:161983192|161984276","exon_intersect_chr1:161983192|161984276"]
["chr1:16225489|16232550:-","chr1:16220386|16225489:-_chr1:16232550|16232646:-_chr1:16233612|16233764:-_chr1:16236631|16237162:-","UN_ARHGEF19_UP_LS0003","ARHGEF19","protein coding gene","no",2.11,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:16232510|16232646","intron_intersect_chr1:16225489|16225590"]
["chr1:162324994|162351754:-","chr1:162324768|162324994:-_chr1:162351754|162352130:-","UN_NOS1AP_LS0012","NOS1AP","protein coding gene","no",4.51,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:162351529|chr1|162351529|162351845|L2:L2:LINE|335|+","NA","intron_intersect_chr1:162343976|162355187","intron_intersect_chr1:162317794|162333017"]
["chr1:162367532|162381891:+","chr1:162367312|162367532:+_chr1:162381891|162382218:+_chr1:162383182|162383377:+","UN_C1orf226_LS0002","C1orf226","protein coding gene","no",3.03,0,0,0.005,45,0,0,"0(0)","HNSC","no","NA","NA","exon_intersect_chr1:162367052|162370475","exon_intersect_chr1:162381730|162382218"]
["chr1:16251785|16251896:-","chr1:16239586|16251785:-_chr1:16251896|16252404:-_chr1:16253096|16253427:-","UN_FBXO42_LS0005","FBXO42","protein coding gene","no",0.77,0,0,0.002,15,0,0,"0(0)","LAML","no","TE_intersect_:16251829|chr1|16251829|16252106|L2c:L2:LINE|342|-","NA","intron_intersect_chr1:16251785|16252288","intron_intersect_chr1:16251785|16252288"]
["chr1:162521771|162522404:+","chr1:162521731|162521771:+_chr1:162522404|162529638:+","UN_UHMK1_LS0010","UHMK1","protein coding gene","no",3.77,0,0,0.004,36,0,0,"0(0)","STAD","no","TE_intersect_:162521625|chr1|162521625|162521926|AluSg:Alu:SINE|130|-","NA","intron_intersect_chr1:162518190|162522404","exon_intersect_chr1:162522404|162529629"]
["chr1:162542007|162550825:-","chr1:162530057|162530265:-_chr1:162531192|162531364:-_chr1:162541612|162542007:-_chr1:162550825|162551107:-","UN_UQCRBP2_UP_LS0001","UQCRBP2","pseudogene","no",2.19,0,0,0.009,84,0,0,"0(0)","LUSC","no","TE_intersect_:162550817|chr1|162550817|162551298|MLT1E1A:ERVL-MaLR:LTR|195|-","NA","NA","NA"]
["chr1:16278096|16279075:-","chr1:16272461|16278096:-_chr1:16279075|16282749:-","UN_FBXO42_LS0018","FBXO42","protein coding gene","no",3.92,0,0,0.003,33,0,0,"0(0)","LAML","no","NA","TE_intersect_:16278074|chr1|16278074|16278387|AluSp:Alu:SINE|70|+","intron_intersect_chr1:16256759|16292314","intron_intersect_chr1:16256759|16292314"]
["chr1:162874656|162888056:-","chr1:162874198|162874656:-_chr1:162888056|162888162:-_chr1:162922225|162922339:-","UN_CCDC190_UP_LS0002","CCDC190","protein coding gene","no",2.96,0,0,0.007,63,0,0,"0(0)","GBM","no","TE_intersect_:162888040|chr1|162888040|162888504|MER45C:hAT-Tip100:DNA|287|-","TE_intersect_:162874383|chr1|162874383|162874749|MLT1C:ERVL-MaLR:LTR|202|-","NA","NA"]
["chr1:162920233|162922225:-","chr1:162918274|162920233:-_chr1:162922225|162922337:-","UN_CCDC190_UP_LS0006","CCDC190","protein coding gene","no",2.59,0,0,0.009,91,0,0,"0(0)","SKCM","no","TE_intersect_:162922134|chr1|162922134|162922309|MIRb:MIR:SINE|306|-","TE_intersect_:162918418|chr1|162918418|162920287|L1PREC2:L1:LINE|231|-","NA","NA"]
["chr1:162921857|162923243:+","chr1:162878290|162878322:+_chr1:162921209|162921857:+_chr1:162923243|162923602:+","UN_RGS4_UP_LS0009","RGS4","protein coding gene","no",4.2,0,0,0.006,56,0,0,"0(0)","DLBC;PCPG;UCS","no","NA","NA","NA","NA"]
["chr1:162977100|162986706:-","chr1:162976073|162977100:-_chr1:162986706|162986728:-","UN_CCDC190_UP_LS0009","CCDC190","protein coding gene","no",3.56,0,0,0.002,16,0,0,"0(0)","PCPG","no","TE_intersect_:162986672|chr1|162986672|162986748|MamTip2:hAT-Tip100:DNA|347|+","TE_intersect_:162976729|chr1|162976729|162977251|MLT1E1A:ERVL-MaLR:LTR|221|-","NA","NA"]
["chr1:1630195|1630292:+","chr1:1630021|1630195:+_chr1:1630292|1630610:+","UN_MIB2_LS0067","MIB2","protein coding gene","no",2.34,0,0,0.006,54,0,0,"0(0)","DLBC;TGCT;THYM;UCS","no","NA","NA","intron_intersect_chr1:1629704|1630292","exon_intersect_chr1:1630292|1630610"]
["chr1:163040499|163040863:-","chr1:163039959|163040499:-_chr1:163040863|163040953:-_chr1:163052684|163052763:-_chr1:163055610|163055756:-","UN_AL392003.1_UP_LS0009","AL392003.1","pseudogene","no",2.66,0,0,0.003,29,0,0,"0(0)","PCPG","no","TE_intersect_:163040587|chr1|163040587|163041216|Charlie1a:hAT-Charlie:DNA|196|-","TE_intersect_:163040035|chr1|163040035|163040532|MER115:hAT-Tip100:DNA|350|+","NA","NA"]
["chr1:163040953|163052684:-","chr1:163039959|163040499:-_chr1:163040863|163040953:-_chr1:163052684|163052763:-_chr1:163055610|163055756:-","UN_AL392003.1_UP_LS0010","AL392003.1","pseudogene","no",2.64,0,0,0.002,22,0,0,"0(0)","PCPG","no","TE_intersect_:163052530|chr1|163052530|163052753|L2c:L2:LINE|329|+","TE_intersect_:163040587|chr1|163040587|163041216|Charlie1a:hAT-Charlie:DNA|196|-","NA","NA"]
["chr1:163052763|163055610:-","chr1:163039959|163040499:-_chr1:163040863|163040953:-_chr1:163052684|163052763:-_chr1:163055610|163055756:-","UN_AL392003.1_UP_LS0012","AL392003.1","pseudogene","no",2.9,0,0,0.002,21,0,0,"0(0)","PCPG","no","TE_intersect_:163055527|chr1|163055527|163055938|MSTB:ERVL-MaLR:LTR|154|-","TE_intersect_:163052758|chr1|163052758|163052858|MER58C:hAT-Charlie:DNA|220|-","NA","NA"]
["chr1:16305919|16312994:-","chr1:16284801|16294917:-_chr1:16305803|16305919:-_chr1:16312994|16315367:-","UN_FBXO42_LS0024","FBXO42","protein coding gene","no",3.58,0,0,0.005,45,0,0,"0(0)","LAML","no","TE_intersect_:16312787|chr1|16312787|16313091|AluSx1:Alu:SINE|141|-","NA","intron_intersect_chr1:16305919|16315169","intron_intersect_chr1:16305919|16315169"]
["chr1:163205826|163206697:+","chr1:163205647|163205826:+_chr1:163206697|163206840:+_chr1:163210793|163211055:+_chr1:163217629|163217768:+","UN_RGS5_LS0041","RGS5","lncRNA gene","no",5.99,0.13,0,0.018,172,0.001,1,"0(0)","PCPG","no","NA","TE_intersect_:163206503|chr1|163206503|163206871|MLT1A1:ERVL-MaLR:LTR|124|+","intron_intersect_chr1:163203113|163206697","exon_intersect_chr1:163206697|163206840"]
["chr1:163206840|163217629:+","chr1:163205719|163205826:+_chr1:163206697|163206840:+_chr1:163217629|163217737:+_chr1:163221193|163221205:+","UN_RGS5_LS0042","RGS5","lncRNA gene","no",0.92,0,0,0.003,29,0,0,"0(0)","PCPG","no","TE_intersect_:163206503|chr1|163206503|163206871|MLT1A1:ERVL-MaLR:LTR|124|+","NA","intron_intersect_chr1:163206840|163210793","exon_intersect_chr1:163217526|163217636"]
["chr1:163211055|163217629:+","chr1:163205647|163205826:+_chr1:163206697|163206840:+_chr1:163210793|163211055:+_chr1:163217629|163217768:+","UN_RGS5_LS0044","RGS5","lncRNA gene","no",2.44,0,0,0.008,76,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:163210793|163213023","exon_intersect_chr1:163217526|163217636"]
["chr1:163241069|163322021:+","chr1:163240945|163241069:+_chr1:163322021|163322212:+_chr1:163326032|163326174:+_chr1:163327488|163327562:+_chr1:163328228|163328304:+_chr1:163328846|163328907:+_chr1:163336751|163336848:+_chr1:163338020|163338093:+_chr1:163339381|163339477:+_chr1:163340364|163340426:+_chr1:163343733|163343815:+","UN_RNA5SP63_UP_LS0001","RNA5SP63","no","no",1.96,0,0,0.003,29,0,0,"0(0)","BRCA","no","TE_intersect_:163240913|chr1|163240913|163241326|L2a:L2:LINE|273|+","NA","intron_intersect_chr1:163239197|163244505","exon_intersect_chr1:163321890|163322212"]
["chr1:1633355|1633989:+","chr1:1632181|1632374:+_chr1:1632783|1632913:+_chr1:1632981|1633120:+_chr1:1633188|1633355:+_chr1:1633989|1634099:+_chr1:1634202|1634328:+_chr1:1634451|1634568:+","MMP23B_LS009","MMP23B","protein coding gene","no",2.07,0,0,0.007,65,0.001,1,"0(0)","OV","yes","NA","NA","exon_intersect_chr1:1632981|1634328","exon_intersect_chr1:1632981|1634328"]
["chr1:163440481|163453675:+","chr1:163440332|163440481:+_chr1:163453675|163453708:+_chr1:163648960|163649002:+","UN_RNA5SP63_UP_LS0004","RNA5SP63","no","no",2.78,0,0,0.001,11,0,0,"0(0)","PCPG","no","NA","TE_intersect_:163453520|chr1|163453520|163453769|MIR:MIR:SINE|218|-","NA","NA"]
["chr1:163440481|163648960:+","chr1:163440311|163440481:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163735514|163735674:+_chr1:163824984|163825652:+","UN_RF00012_UP_LS0003","RF00012","small non-coding RNA gene","no",5.96,0,0,0.008,74,0,0,"0(0)","PCPG","no","NA","TE_intersect_:163648667|chr1|163648667|163649194|MER1A:hAT-Charlie:DNA|139|+","NA","NA"]
["chr1:163440481|163735514:+","chr1:163440343|163440481:+_chr1:163735514|163735674:+_chr1:163824984|163825642:+","UN_RF00012_UP_LS0005","RF00012","small non-coding RNA gene","no",3.55,0,0,0.001,11,0,0,"0(0)","PCPG","no","NA","TE_intersect_:163735505|chr1|163735505|163735627|AluJb:Alu:SINE|148|-","NA","NA"]
["chr1:163645697|163648960:+","chr1:163645577|163645697:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163735514|163735674:+_chr1:163810863|163811005:+_chr1:163824984|163825655:+","UN_RF00012_UP_LS0009","RF00012","small non-coding RNA gene","no",1.05,0,0,0.002,20,0,0,"0(0)","THYM","no","TE_intersect_:163639993|chr1|163639993|163646040|L1PA2:L1:LINE|14|-","TE_intersect_:163648667|chr1|163648667|163649194|MER1A:hAT-Charlie:DNA|139|+","NA","NA"]
["chr1:163646122|163654482:+","chr1:163645591|163646122:+_chr1:163654482|163654634:+_chr1:163735514|163735674:+_chr1:163824984|163825651:+","UN_RF00012_UP_LS0013","RF00012","small non-coding RNA gene","no",1.11,0,0,0.006,57,0,0,"0(0)","ESCA","no","TE_intersect_:163646006|chr1|163646006|163646799|L1MC1:L1:LINE|193|-","NA","NA","NA"]
["chr1:163654634|163686906:+","chr1:163645652|163646122:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163686906|163687017:+_chr1:163735514|163735674:+_chr1:163824984|163825655:+","UN_RF00012_UP_LS0019","RF00012","small non-coding RNA gene","no",2.21,0,0,0.016,154,0,0,"0(0)","ESCA;LUSC;PCPG;THYM","no","TE_intersect_:163654517|chr1|163654517|163654654|MamTip2:hAT-Tip100:DNA|359|+","NA","NA","NA"]
["chr1:163677465|163686906:+","chr1:163645886|163646122:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163677290|163677465:+_chr1:163686906|163687017:+_chr1:163735514|163735674:+_chr1:163824984|163825643:+","UN_RF00012_UP_LS0023","RF00012","small non-coding RNA gene","no",1.94,0,0,0.01,97,0,0,"0(0)","ESCA;LUSC;THYM","no","NA","NA","NA","NA"]
["chr1:163677465|163735514:+","chr1:163645620|163646122:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163677290|163677465:+_chr1:163735514|163735674:+_chr1:163810863|163811005:+_chr1:163824984|163825628:+","UN_RF00012_UP_LS0024","RF00012","small non-coding RNA gene","no",1.64,0,0,0.006,62,0,0,"0(0)","ESCA","no","NA","TE_intersect_:163735505|chr1|163735505|163735627|AluJb:Alu:SINE|148|-","NA","NA"]
["chr1:163735674|163810863:+","chr1:163645652|163646122:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163735514|163735674:+_chr1:163810863|163811005:+_chr1:163824984|163825655:+","UN_RF00012_UP_LS0032","RF00012","small non-coding RNA gene","no",2.71,0,0,0.029,280,0,0,"0(0)","ESCA;HNSC;LUSC;OV;PCPG;THYM","no","TE_intersect_:163735628|chr1|163735628|163736048|L1MEf:L1:LINE|334|-","NA","NA","NA"]
["chr1:163735674|163845984:+","chr1:163735513|163735674:+_chr1:163845984|163846216:+_chr1:163863605|163863736:+_chr1:163880306|163880571:+","UN_RF00012_UP_LS0035","RF00012","small non-coding RNA gene","no",3.06,0,0,0.004,40,0,0,"0(0)","PCPG","no","TE_intersect_:163735628|chr1|163735628|163736048|L1MEf:L1:LINE|334|-","NA","NA","NA"]
["chr1:1637513|1704904:-","chr1:1635226|1635856:-_chr1:1635937|1636126:-_chr1:1636333|1636481:-_chr1:1636682|1636798:-_chr1:1636897|1637004:-_chr1:1637081|1637202:-_chr1:1637408|1637513:-_chr1:1704904|1705025:-_chr1:1705642|1705732:-_chr1:1707409|1707584:-_chr1:1708180|1708245:-_chr1:1708794|1708952:-_chr1:1709038|1709133:-_chr1:1709518|1709640:-_chr1:1712264|1712400:-_chr1:1716346|1716478:-_chr1:1719328|1719455:-_chr1:1721596|1721711:-_chr1:1722708|1722831:-_chr1:1724258|1724514:-","UN_AL691432.2_UP_LS0010","AL691432.2","lncRNA gene","no",11.01,0,0,0.003,31,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:1704039|1705025","intron_intersect_chr1:1637513|1637762"]
["chr1:163758712|163758779:-","chr1:163757842|163758712:-_chr1:163758779|163771309:-","UN_RNA5SP62_UP_LS0005","RNA5SP62","no","no",1.32,0,0,0.001,13,0,0,"0(0)","ESCA","no","TE_intersect_:163758532|chr1|163758532|163760298|L1PA10:L1:LINE|170|+","TE_intersect_:163758532|chr1|163758532|163760298|L1PA10:L1:LINE|170|+","NA","NA"]
["chr1:163811005|163824984:+","chr1:163645652|163646122:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163735514|163735674:+_chr1:163810863|163811005:+_chr1:163824984|163825655:+","UN_RF00012_UP_LS0045","RF00012","small non-coding RNA gene","no",2.69,0,0,0.038,365,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;OV;PCPG;STAD;THYM","no","NA","NA","NA","NA"]
["chr1:163811005|163845984:+","chr1:163440253|163440481:+_chr1:163648960|163649017:+_chr1:163654482|163654634:+_chr1:163735514|163735674:+_chr1:163810863|163811005:+_chr1:163845984|163846216:+_chr1:163863605|163863736:+_chr1:163880306|163880585:+","UN_RF00012_UP_LS0046","RF00012","small non-coding RNA gene","no",1.99,0,0,0.003,26,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr1:163846216|163863605:+","chr1:163845982|163846216:+_chr1:163863605|163863736:+_chr1:163880306|163880562:+","UN_RF00012_UP_LS0052","RF00012","small non-coding RNA gene","no",2.66,0.03,0,0.021,198,0.001,1,"0(0)","PCPG;THYM","no","NA","NA","NA","NA"]
["chr1:163863736|163880306:+","chr1:163845982|163846216:+_chr1:163863605|163863736:+_chr1:163880306|163880562:+","UN_RF00012_UP_LS0053","RF00012","small non-coding RNA gene","no",3.64,0,0,0.022,211,0,0,"0(0)","ESCA;LUSC;PCPG;THYM","no","NA","NA","NA","NA"]
["chr1:16395862|16395909:-","chr1:16395676|16395862:-_chr1:16395909|16396312:-_chr1:16396558|16396746:-_chr1:16399344|16399521:-_chr1:16400720|16400892:-_chr1:16403727|16403844:-_chr1:16403968|16404039:-_chr1:16404967|16405104:-_chr1:16409118|16410011:-","UN_SZRD1_LS0038","SZRD1","protein coding gene","no",4.81,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:16395681|16396312","exon_intersect_chr1:16395681|16396312"]
["chr1:16397235|16397288:-","chr1:16397024|16397235:-_chr1:16397288|16397457:-","UN_SZRD1_LS0099","SZRD1","protein coding gene","no",3.2,0,0,0.006,56,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:16395038|16398145","exon_intersect_chr1:16395038|16398145"]
["chr1:1649638|1708234:-","chr1:1641772|1641820:-_chr1:1641906|1642001:-_chr1:1642386|1642508:-_chr1:1645126|1645262:-_chr1:1649499|1649638:-_chr1:1708234|1708245:-_chr1:1708794|1708952:-_chr1:1709038|1709127:-_chr1:1709518|1709640:-_chr1:1712264|1712400:-_chr1:1716346|1716478:-_chr1:1719358|1719455:-_chr1:1721596|1721711:-_chr1:1722708|1722831:-","UN_AL691432.2_UP_LS0703","AL691432.2","lncRNA gene","no",15.18,0,0,0.003,28,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:1708180|1708245","intron_intersect_chr1:1649637|1652439"]
["chr1:165131622|165132685:-","chr1:165131463|165131622:-_chr1:165132685|165132926:-_chr1:165137724|165138016:-","UN_RNU6-755P_UP_LS0003","RNU6-755P","small non-coding RNA gene","no",12.73,0,0,0.049,468,0,0,"0(0)","COAD;ESCA;LIHC;READ;STAD","no","NA","NA","NA","NA"]
["chr1:165132926|165137724:-","chr1:165131463|165131622:-_chr1:165132685|165132926:-_chr1:165137724|165138016:-","UN_RNU6-755P_UP_LS0004","RNU6-755P","small non-coding RNA gene","no",10.49,0,0,0.049,468,0,0,"0(0)","COAD;ESCA;LIHC;OV;READ;STAD","no","NA","NA","NA","NA"]
["chr1:165409648|165410702:-","chr1:165400922|165401410:-_chr1:165406812|165406917:-_chr1:165408227|165408318:-_chr1:165409558|165409648:-_chr1:165410702|165410831:-_chr1:165410949|165411109:-_chr1:165417041|165417220:-_chr1:165419870|165420014:-_chr1:165428719|165428966:-_chr1:165444845|165445172:-","UN_RXRG_LS0003","RXRG","protein coding gene","no",12.66,0.11,0,0.008,75,0.003,2,"0(0)","SKCM","no","NA","NA","exon_intersect_chr1:165410702|165410831","exon_intersect_chr1:165409558|165409690"]
["chr1:165411109|165419870:-","chr1:165410750|165410831:-_chr1:165410949|165411109:-_chr1:165419870|165420014:-_chr1:165428719|165428966:-_chr1:165444845|165445172:-","UN_RXRG_LS0006","RXRG","protein coding gene","no",122.32,0,0,0.005,51,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr1:165419870|165420014","intron_intersect_chr1:165411109|165417041"]
["chr1:165420014|165422117:-","chr1:165400922|165401410:-_chr1:165406812|165406917:-_chr1:165408227|165408318:-_chr1:165409558|165409690:-_chr1:165410702|165410831:-_chr1:165410949|165411109:-_chr1:165417041|165417220:-_chr1:165419870|165420014:-_chr1:165422117|165422209:-","UN_RXRG_LS0010","RXRG","protein coding gene","no",7.07,0,0,0.006,55,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:165420014|165424751","intron_intersect_chr1:165420014|165424751"]
["chr1:165482607|165499012:-","chr1:165410750|165410831:-_chr1:165410949|165411109:-_chr1:165417041|165417220:-_chr1:165419870|165420014:-_chr1:165428719|165428966:-_chr1:165482349|165482607:-_chr1:165499012|165499113:-_chr1:165501431|165501627:-_chr1:165574018|165574088:-_chr1:165575283|165575349:-_chr1:165575453|165575634:-","UN_AL157714.2_LS0010","AL157714.2","lncRNA gene","no",2.55,0,0,0.013,128,0,0,"0(0)","KICH;THCA","no","TE_intersect_:165498848|chr1|165498848|165499094|MIR:MIR:SINE|232|-","NA","exon_intersect_chr1:165499012|165499113","intron_intersect_chr1:165482607|165489575"]
["chr1:165482607|165574018:-","chr1:165476844|165477115:-_chr1:165482349|165482607:-_chr1:165574018|165574051:-","UN_AL157714.2_LS0012","AL157714.2","lncRNA gene","no",2.66,0,0,0.01,92,0,0,"0(0)","THCA","no","TE_intersect_:165573924|chr1|165573924|165574041|MLT1I:ERVL-MaLR:LTR|223|+","NA","exon_intersect_chr1:165574018|165574088","intron_intersect_chr1:165482607|165489575"]
["chr1:165483951|165501431:-","chr1:165476839|165477115:-_chr1:165482349|165482607:-_chr1:165483835|165483951:-_chr1:165501431|165501627:-_chr1:165508080|165508171:-_chr1:165527590|165527657:-","UN_AL157714.2_LS0015","AL157714.2","lncRNA gene","no",4.48,0,0,0.004,34,0,0,"0(0)","THCA","no","NA","TE_intersect_:165483702|chr1|165483702|165483971|AluSc:Alu:SINE|108|+","exon_intersect_chr1:165501431|165501670","intron_intersect_chr1:165482607|165489575"]
["chr1:165501627|165526030:-","chr1:165476837|165477115:-_chr1:165482349|165482607:-_chr1:165501431|165501627:-_chr1:165526030|165526324:-","UN_AL157714.2_LS0024","AL157714.2","lncRNA gene","no",1.76,0,0,0.007,71,0,0,"0(0)","LUAD","no","NA","NA","exon_intersect_chr1:165526030|165526054","exon_intersect_chr1:165501431|165501670"]
["chr1:165508171|165527590:-","chr1:165476856|165477115:-_chr1:165482349|165482607:-_chr1:165501431|165501627:-_chr1:165508080|165508171:-_chr1:165527590|165527657:-","UN_AL157714.2_LS0035","AL157714.2","lncRNA gene","no",2.09,0,0,0.003,32,0,0,"0(0)","KICH;UCS","no","NA","TE_intersect_:165508056|chr1|165508056|165508435|MLT1J:ERVL-MaLR:LTR|306|-","exon_intersect_chr1:165527590|165527658","intron_intersect_chr1:165508171|165508460"]
["chr1:165508171|165574018:-","chr1:165400922|165401410:-_chr1:165406812|165406917:-_chr1:165408227|165408318:-_chr1:165409558|165409690:-_chr1:165410702|165410831:-_chr1:165410949|165411109:-_chr1:165417041|165417220:-_chr1:165419870|165420014:-_chr1:165428719|165428966:-_chr1:165444845|165445499:-_chr1:165501431|165501627:-_chr1:165508080|165508171:-_chr1:165574018|165574088:-_chr1:165575283|165575643:-","UN_AL157714.2_LS0036","AL157714.2","lncRNA gene","no",1.85,0,0,0.003,29,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr1:165575349|165575453:-","chr1:165410750|165410831:-_chr1:165410949|165411109:-_chr1:165417041|165417220:-_chr1:165419870|165420014:-_chr1:165428719|165428966:-_chr1:165482349|165482607:-_chr1:165499012|165499113:-_chr1:165501431|165501627:-_chr1:165574018|165574088:-_chr1:165575283|165575349:-_chr1:165575453|165575634:-","UN_AL157714.2_LS0038","AL157714.2","lncRNA gene","no",2.89,0,0,0.003,32,0,0,"0(0)","THCA","no","TE_intersect_:165575392|chr1|165575392|165575561|MIRb:MIR:SINE|302|+","NA","intron_intersect_chr1:165575369|165581355","exon_intersect_chr1:165575283|165575369"]
["chr1:166070763|166115620:-","chr1:166070019|166070763:-_chr1:166115620|166115755:-_chr1:166165986|166166225:-","UN_FAM78B_LS0011","FAM78B","protein coding gene","no",0.85,0,0,0.008,77,0,0,"0(0)","SKCM","no","TE_intersect_:166115543|chr1|166115543|166115784|L2a:L2:LINE|336|-","NA","intron_intersect_chr1:166087483|166147782","intron_intersect_chr1:166070763|166081183"]
["chr1:16608779|16625775:-","chr1:16562465|16564186:-_chr1:16564807|16564918:-_chr1:16565633|16565805:-_chr1:16566408|16566459:-_chr1:16567179|16567351:-_chr1:16567979|16568030:-_chr1:16569073|16569236:-_chr1:16573142|16573193:-_chr1:16574487|16574692:-_chr1:16575157|16575229:-_chr1:16576267|16576481:-_chr1:16577317|16577419:-_chr1:16579193|16579402:-_chr1:16580745|16580956:-_chr1:16581420|16581492:-_chr1:16582544|16582758:-_chr1:16583594|16583696:-_chr1:16585489|16585698:-_chr1:16587050|16587261:-_chr1:16587725|16587797:-_chr1:16588849|16589063:-_chr1:16589899|16590001:-_chr1:16591847|16592056:-_chr1:16592159|16592313:-_chr1:16593441|16593753:-_chr1:16594592|16594661:-_chr1:16594931|16595013:-_chr1:16608508|16608779:-_chr1:16625775|16626005:-_chr1:16626353|16626499:-_chr1:16627145|16627289:-_chr1:16628468|16628650:-_chr1:16630890|16631109:-_chr1:16631530|16631613:-_chr1:16632275|16632371:-_chr1:16632607|16632769:-_chr1:16633095|16633346:-_chr1:16635027|16635168:-_chr1:16643028|16643145:-_chr1:16644646|16644707:-","UN_AL355149.1_UP_LS0001","AL355149.1","pseudogene","no",1.9,0.01,0,0.005,51,0.001,1,"0(0)","STAD","no","NA","TE_intersect_:16608756|chr1|16608756|16608897|L2a:L2:LINE|277|-","exon_intersect_chr1:16625775|16626005","intron_intersect_chr1:16608779|16613338"]
["chr1:166115755|166165986:-","chr1:166070019|166070763:-_chr1:166115620|166115755:-_chr1:166165986|166166225:-","UN_FAM78B_LS0027","FAM78B","protein coding gene","no",1.84,0,0,0.005,46,0,0,"0(0)","SKCM","no","NA","TE_intersect_:166115543|chr1|166115543|166115784|L2a:L2:LINE|336|-","exon_intersect_chr1:166165986|166166719","intron_intersect_chr1:166087483|166147782"]
["chr1:166166054|166289353:+","chr1:166165868|166166054:+_chr1:166289353|166294119:+","UN_AL390115.1_UP_LS0004","AL390115.1","lncRNA gene","no",1.19,0,0,0.004,34,0,0,"0(0)","GBM","no","NA","TE_intersect_:166289292|chr1|166289292|166289368|MER46C:TcMar-Tigger:DNA|211|+","exon_intersect_chr1:166165986|166166719","NA"]
["chr1:166166054|166334885:+","chr1:166165863|166166054:+_chr1:166334885|166334963:+_chr1:166335328|166335762:+","UN_FMO7P_UP_LS0001","FMO7P","pseudogene","no",1.12,0,0,0.003,27,0,0,"0(0)","GBM","no","NA","TE_intersect_:166334707|chr1|166334707|166335443|MER92-int:ERV1:LTR|215|+","exon_intersect_chr1:166165986|166166719","exon_intersect_chr1:166334884|166334963"]
["chr1:166243023|166246062:+","chr1:166242970|166243023:+_chr1:166246062|166246218:+","UN_AL390115.1_UP_LS0005","AL390115.1","lncRNA gene","no",1.33,0,0,0.009,83,0,0,"0(0)","ESCA;OV;STAD","no","TE_intersect_:166239974|chr1|166239974|166243065|L1PA3:L1:LINE|44|-","TE_intersect_:166243053|chr1|166243053|166249084|L1HS:L1:LINE|9|-","NA","NA"]
["chr1:16624691|16625567:-","chr1:16618262|16624691:-_chr1:16625567|16626005:-_chr1:16626353|16626499:-_chr1:16627145|16627289:-_chr1:16628468|16628650:-_chr1:16630890|16631109:-_chr1:16631530|16631613:-_chr1:16632275|16632371:-_chr1:16633095|16633346:-_chr1:16635027|16635168:-_chr1:16642767|16643145:-_chr1:16644511|16644683:-","UN_CROCCP2_LS0027","CROCCP2","pseudogene","no",8.65,0,0,0.004,43,0,0,"0(0)","ESCA","no","TE_intersect_:16625281|chr1|16625281|16625571|AluSc8:Alu:SINE|90|-","TE_intersect_:16624669|chr1|16624669|16624969|AluSz:Alu:SINE|97|+","intron_intersect_chr1:16620024|16625775","intron_intersect_chr1:16620024|16625775"]
["chr1:16643145|16645067:-","chr1:16618246|16626005:-_chr1:16626353|16626499:-_chr1:16627145|16627289:-_chr1:16628468|16628650:-_chr1:16630890|16631109:-_chr1:16631530|16631613:-_chr1:16632275|16632371:-_chr1:16633095|16633346:-_chr1:16635027|16635168:-_chr1:16642767|16642850:-_chr1:16643028|16643145:-_chr1:16645067|16645624:-","UN_CROCCP2_LS0080","CROCCP2","pseudogene","no",1.06,0,0,0.002,23,0,0,"0(0)","LAML","no","NA","NA","NA","intron_intersect_chr1:16643145|16644646"]
["chr1:1664890|1730728:+","chr1:1664683|1664890:+_chr1:1730728|1731894:+","UN_AL109917.1_UP_LS0011","AL109917.1","lncRNA gene","no",3.02,0,0,0.001,13,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:1661478|1666019","exon_intersect_chr1:1730246|1731904"]
["chr1:166556627|166557845:+","chr1:166397935|166398166:+_chr1:166476136|166476283:+_chr1:166556564|166556627:+_chr1:166557845|166557895:+_chr1:166564150|166564227:+_chr1:166566156|166566312:+_chr1:166573635|166573777:+_chr1:166574600|166574799:+_chr1:166577309|166577648:+_chr1:166579130|166579200:+_chr1:166580359|166582986:+_chr1:166586218|166586333:+_chr1:166604760|166604857:+_chr1:166612460|166612603:+_chr1:166620799|166620987:+_chr1:166621870|166622032:+_chr1:166623644|166623786:+_chr1:166624681|166625238:+","UN_FMO8P_UP_LS0008","FMO8P","pseudogene","no",6.94,0,0,0.003,27,0,0,"0(0)","BLCA","no","TE_intersect_:166555193|chr1|166555193|166556741|MER51-int:ERV1:LTR|136|+","TE_intersect_:166557753|chr1|166557753|166558079|HERV4_I-int:ERV1:LTR|110|+","NA","NA"]
["chr1:166566312|166573635:+","chr1:166397935|166398166:+_chr1:166476136|166476283:+_chr1:166556564|166556627:+_chr1:166557845|166557895:+_chr1:166564150|166564227:+_chr1:166566156|166566312:+_chr1:166573635|166573777:+_chr1:166574600|166574799:+_chr1:166577309|166577648:+_chr1:166579130|166579200:+_chr1:166580359|166582986:+_chr1:166586218|166586333:+_chr1:166604760|166604857:+_chr1:166612460|166612603:+_chr1:166620799|166620987:+_chr1:166621870|166622032:+_chr1:166623644|166623786:+_chr1:166624681|166625238:+","UN_FMO8P_LS0002","FMO8P","pseudogene","no",4.71,0,0,0.003,26,0,0,"0(0)","BLCA","no","NA","NA","intron_intersect_chr1:166566312|166569953","exon_intersect_chr1:166573635|166573777"]
["chr1:16658350|16666814:-","chr1:16658331|16658350:-_chr1:16666814|16666933:-_chr1:16740524|16740687:-","UN_AL137798.2_LS0002","AL137798.2","lncRNA gene","no",4.64,0,0,0.002,21,0,0,"0(0)","OV","no","TE_intersect_:16666784|chr1|16666784|16666948|U1:snRNA:snRNA|0|-","NA","exon_intersect_chr1:16666785|16666948","NA"]
["chr1:16666911|16740540:-","chr1:16666785|16666911:-_chr1:16740540|16740663:-","UN_CROCCP2_UP_LS0007","CROCCP2","pseudogene","no",54.08,0,0,0.012,111,0,0,"0(0)","OV","no","TE_intersect_:16740515|chr1|16740515|16740679|U1:snRNA:snRNA|0|+","TE_intersect_:16666784|chr1|16666784|16666948|U1:snRNA:snRNA|0|-","exon_intersect_chr1:16740516|16740679","exon_intersect_chr1:16666785|16666948"]
["chr1:16666924|16740553:+","chr1:16666801|16666924:+_chr1:16740553|16740679:+","UN_BX284668.3_UP_LS0002","BX284668.3","pseudogene","no",30.75,0,0,0.012,114,0,0,"0(0)","OV","no","TE_intersect_:16666784|chr1|16666784|16666948|U1:snRNA:snRNA|0|-","TE_intersect_:16740515|chr1|16740515|16740679|U1:snRNA:snRNA|0|+","exon_intersect_chr1:16666785|16666948","exon_intersect_chr1:16740516|16740679"]
["chr1:16666933|16740524:-","chr1:16666785|16666933:-_chr1:16740524|16740681:-","UN_CROCCP2_UP_LS0009","CROCCP2","pseudogene","no",4.74,0,0,0.009,87,0,0,"0(0)","OV","no","TE_intersect_:16740515|chr1|16740515|16740679|U1:snRNA:snRNA|0|+","TE_intersect_:16666784|chr1|16666784|16666948|U1:snRNA:snRNA|0|-","exon_intersect_chr1:16740516|16740679","exon_intersect_chr1:16666785|16666948"]
["chr1:16668974|16669664:+","chr1:16668902|16668974:+_chr1:16669664|16669668:+_chr1:16738523|16740679:+","UN_AL021920.1_UP_LS0010","AL021920.1","lncRNA gene","no",1.07,0,0,0.004,40,0,0,"0(0)","OV","no","TE_intersect_:16668819|chr1|16668819|16669389|LTR8A:ERV1:LTR|149|-","NA","NA","NA"]
["chr1:16685800|16685852:-","chr1:16684592|16685800:-_chr1:16685852|16686217:-","UN_AL021920.2_LS0004","AL021920.2","pseudogene","no",7.46,0,0,0.013,125,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr1:16685621|16686055","exon_intersect_chr1:16685621|16686055"]
["chr1:16688839|16691113:-","chr1:16682740|16686296:-_chr1:16686639|16686755:-_chr1:16687331|16688839:-_chr1:16691113|16691294:-_chr1:16696488|16696694:-_chr1:16696779|16696924:-_chr1:16697257|16697334:-_chr1:16698037|16698063:-_chr1:16699426|16699621:-_chr1:16699859|16700020:-_chr1:16700100|16701310:-_chr1:16701882|16701940:-_chr1:16702255|16702409:-_chr1:16702701|16702972:-_chr1:16703943|16704144:-_chr1:16707288|16707419:-_chr1:16707545|16707727:-_chr1:16707892|16708114:-","UN_ESPNP_LS0003","ESPNP","pseudogene","no",2.68,0,0,0.007,68,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:16691113|16691294","intron_intersect_chr1:16688749|16691113"]
["chr1:166896101|166908040:-","chr1:166895711|166896101:-_chr1:166908040|166908104:-_chr1:166917792|166918454:-","UN_ILDR2_LS0002","ILDR2","protein coding gene","no",3.39,0,0,0.006,59,0,0,"0(0)","GBM","no","NA","TE_intersect_:166895623|chr1|166895623|166896152|MER39:ERV1:LTR|231|-","exon_intersect_chr1:166908040|166908104","intron_intersect_chr1:166896101|166907053"]
["chr1:166896101|166917792:-","chr1:166895711|166896101:-_chr1:166917792|166918454:-","UN_ILDR2_LS0003","ILDR2","protein coding gene","no",3.08,0,0,0.002,18,0,0,"0(0)","GBM","no","TE_intersect_:166917729|chr1|166917729|166918098|MLT1H2:ERVL-MaLR:LTR|243|-","TE_intersect_:166895623|chr1|166895623|166896152|MER39:ERV1:LTR|231|-","exon_intersect_chr1:166908191|166919390","intron_intersect_chr1:166896101|166907053"]
["chr1:16694079|16696488:-","chr1:16682902|16686296:-_chr1:16686639|16686755:-_chr1:16687331|16687522:-_chr1:16691113|16691294:-_chr1:16692105|16694014:-_chr1:16694036|16694079:-_chr1:16696488|16696694:-_chr1:16696779|16696924:-_chr1:16697257|16697334:-_chr1:16698037|16698063:-_chr1:16699426|16699621:-_chr1:16699859|16700020:-_chr1:16700100|16701465:-","UN_ESPNP_LS0010","ESPNP","pseudogene","no",2.13,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:16696431|16696694","intron_intersect_chr1:16692309|16696431"]
["chr1:166958101|166972902:-","chr1:166921230|166921379:-_chr1:166922593|166922809:-_chr1:166927067|166927180:-_chr1:166935301|166935477:-_chr1:166936591|166936737:-_chr1:166939514|166939570:-_chr1:166956733|166956852:-_chr1:166957769|166958101:-_chr1:166972902|166973575:-","UN_ILDR2_LS0011","ILDR2","protein coding gene","no",2.21,0,0,0.003,29,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:166958101|166975223","intron_intersect_chr1:166958101|166975223"]
["chr1:16700020|16701200:-","chr1:16683083|16686296:-_chr1:16686639|16686755:-_chr1:16687331|16687522:-_chr1:16691113|16691294:-_chr1:16696488|16696694:-_chr1:16696779|16696924:-_chr1:16698037|16698063:-_chr1:16699426|16700020:-_chr1:16701200|16701396:-","UN_ESPNP_LS0021","ESPNP","pseudogene","no",0.36,0,0,0.004,42,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:16700020|16701546","intron_intersect_chr1:16700020|16701546"]
["chr1:167013399|167016222:+","chr1:167012734|167013399:+_chr1:167016222|167016284:+_chr1:167017827|167017959:+_chr1:167021085|167021160:+_chr1:167021668|167022246:+","UN_MAEL_LS0021","MAEL","protein coding gene","no",11.4,0,0,0.004,43,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:167012511|167016222","exon_intersect_chr1:167016222|167016284"]
["chr1:16737800|16738490:-","chr1:16737349|16737800:-_chr1:16738490|16740165:-","UN_ESPNP_UP_LS0001","ESPNP","pseudogene","no",1.81,0,0,0.003,25,0,0,"0(0)","OV","no","TE_intersect_:16738074|chr1|16738074|16738644|LTR8A:ERV1:LTR|147|+","NA","NA","NA"]
["chr1:16737800|16741937:-","chr1:16737348|16737800:-_chr1:16741937|16742073:-_chr1:16750494|16750662:-","UN_ESPNP_UP_LS0002","ESPNP","pseudogene","no",5.85,0,0,0.007,71,0,0,"0(0)","OV","no","TE_intersect_:16741933|chr1|16741933|16742096|AluSx:Alu:SINE|122|+","NA","intron_intersect_chr1:16740679|16750233","NA"]
["chr1:167396576|167397994:+","chr1:167389677|167389761:+_chr1:167396286|167396427:+_chr1:167396533|167396576:+_chr1:167397994|167398133:+_chr1:167399186|167399365:+_chr1:167401451|167401556:+_chr1:167411959|167412304:+_chr1:167413026|167413114:+","UN_POU2F1_LS0019","POU2F1","protein coding gene","no",1.48,0.03,0,0.009,82,0.001,1,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:167396533|167396825","exon_intersect_chr1:167397994|167398133"]
["chr1:1676846|1734690:-","chr1:1664872|1666019:-_chr1:1668327|1668472:-_chr1:1669664|1669736:-_chr1:1670098|1670151:-_chr1:1671509|1671629:-_chr1:1675463|1675590:-_chr1:1676064|1676199:-_chr1:1676378|1676846:-_chr1:1734690|1734835:-_chr1:1738321|1738448:-_chr1:1738922|1739057:-_chr1:1739236|1739704:-_chr1:1744251|1744668:-_chr1:1745724|1746065:-","UN_CDK11B_UP_LS0070","CDK11B","protein coding gene","no",22.52,0,0,0.004,39,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:1734690|1734835","intron_intersect_chr1:1676846|1690976"]
["chr1:167773368|167774749:+","chr1:167721993|167722242:+_chr1:167765583|167765749:+_chr1:167772275|167772488:+_chr1:167773236|167773368:+_chr1:167774749|167774847:+_chr1:167776064|167776166:+_chr1:167787820|167790819:+","UN_MPZL1_LS0016","MPZL1","protein coding gene","no",2.61,0,0,0.002,21,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:167773236|167773909","exon_intersect_chr1:167774556|167774847"]
["chr1:167788840|167788967:-","chr1:167788663|167788840:-_chr1:167788967|167789011:-","UN_MPZL1_LS0020","MPZL1","protein coding gene","no",0.91,0,0,0.004,35,0,0,"0(0)","ESCA","no","TE_intersect_:167788879|chr1|167788879|167789012|FLAM_C:Alu:SINE|177|-","NA","exon_intersect_chr1:167787820|167791919","exon_intersect_chr1:167787820|167791919"]
["chr1:167790173|167790380:-","chr1:167790037|167790173:-_chr1:167790380|167790523:-","UN_MPZL1_LS0059","MPZL1","protein coding gene","no",3.55,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:167787820|167791919","exon_intersect_chr1:167787820|167791919"]
["chr1:167809839|167818072:-","chr1:167807451|167809839:-_chr1:167818072|167818267:-_chr1:167818363|167818412:-_chr1:167822024|167822141:-_chr1:167823008|167823123:-_chr1:167824476|167824572:-_chr1:167824651|167824783:-","UN_ADCY10_LS0001","ADCY10","protein coding gene","no",4.26,0,0,0.017,159,0,0,"0(0)","ESCA;LUSC","no","NA","NA","exon_intersect_chr1:167818072|167818267","intron_intersect_chr1:167809839|167810725"]
["chr1:167863838|167951800:+","chr1:167863504|167863838:+_chr1:167951800|167951861:+_chr1:167966629|167966721:+_chr1:167974830|167975015:+_chr1:167987495|167987608:+_chr1:167991204|167991339:+_chr1:167993226|167993440:+_chr1:168002482|168002575:+_chr1:168003870|168003989:+_chr1:168004533|168004793:+_chr1:168022988|168023047:+_chr1:168038371|168038488:+_chr1:168043025|168043140:+_chr1:168044585|168044671:+_chr1:168044900|168045227:+_chr1:168063621|168063759:+_chr1:168065590|168065746:+_chr1:168066377|168066465:+_chr1:168068358|168068463:+_chr1:168075371|168075834:+","UN_MIR1255B2_UP_LS0001","MIR1255B2","small non-coding RNA gene","no",4.91,0,0,0.006,55,0,0,"0(0)","BLCA;TGCT","no","TE_intersect_:167863572|chr1|167863572|167864915|Harlequin-int:ERV1:LTR|133|+","NA","intron_intersect_chr1:167861063|167870257","exon_intersect_chr1:167951800|167951861"]
["chr1:168063759|168066377:+","chr1:168045081|168045227:+_chr1:168063621|168063759:+_chr1:168066377|168066465:+_chr1:168068358|168068463:+_chr1:168075040|168075834:+","UN_DCAF6_LS0036","DCAF6","protein coding gene","no",6.16,0,0,0.003,29,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:168063621|168063967","exon_intersect_chr1:168066377|168066465"]
["chr1:168073873|168074022:+","chr1:167936818|167937008:+_chr1:167951800|167951861:+_chr1:167966629|167966721:+_chr1:167974830|167975015:+_chr1:167987495|167987608:+_chr1:167991204|167991339:+_chr1:167993226|167993440:+_chr1:168002482|168002575:+_chr1:168003870|168003989:+_chr1:168004533|168004793:+_chr1:168038371|168038488:+_chr1:168043025|168043140:+_chr1:168044585|168044671:+_chr1:168044900|168045227:+_chr1:168050892|168050933:+_chr1:168063621|168063759:+_chr1:168065590|168065746:+_chr1:168066377|168066465:+_chr1:168068358|168073873:+_chr1:168074022|168075834:+","UN_DCAF6_LS0048","DCAF6","protein coding gene","no",15.1,0,0,0.006,62,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:168068463|168075371","intron_intersect_chr1:168068463|168075371"]
["chr1:168097232|168097882:-","chr1:168085278|168085796:-_chr1:168087585|168087704:-_chr1:168090564|168090668:-_chr1:168096508|168097232:-_chr1:168097882|168098234:-_chr1:168104477|168104894:-_chr1:168136739|168136900:-","UN_GPR161_LS0014","GPR161","protein coding gene","no",1.18,0,0,0.008,77,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:168097786|chr1|168097786|168097958|MIR:MIR:SINE|252|-","NA","intron_intersect_chr1:168097232|168104477","intron_intersect_chr1:168097232|168104477"]
["chr1:168098234|168104477:-","chr1:168085278|168085796:-_chr1:168087585|168087704:-_chr1:168090564|168090668:-_chr1:168096508|168097232:-_chr1:168097882|168098234:-_chr1:168104477|168104894:-_chr1:168136739|168136900:-","UN_GPR161_LS0021","GPR161","protein coding gene","no",1.04,0,0,0.008,72,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr1:168104477|168104909","intron_intersect_chr1:168097232|168104477"]
["chr1:168208717|168220515:-","chr1:168207180|168208717:-_chr1:168220515|168220655:-","UN_GPR161_UP_LS0003","GPR161","protein coding gene","no",8.79,0,0,0.006,56,0,0,"0(0)","HNSC","no","TE_intersect_:168220433|chr1|168220433|168220794|THE1D:ERVL-MaLR:LTR|162|-","TE_intersect_:168208655|chr1|168208655|168208890|Tigger1:TcMar-Tigger:DNA|154|-","NA","NA"]
["chr1:168249076|168250768:-","chr1:168248874|168249076:-_chr1:168250768|168251050:-_chr1:168253579|168261122:-_chr1:168261144|168263350:-","UN_SFT2D2_LS0021","SFT2D2","protein coding gene","no",0.8,0,0,0.001,14,0,0,"0(0)","ESCA","no","NA","TE_intersect_:168248606|chr1|168248606|168249249|L1P1:L1:LINE|78|-","exon_intersect_chr1:168242501|168253025","exon_intersect_chr1:168242501|168253025"]
["chr1:168354626|168354772:+","chr1:168354425|168354626:+_chr1:168354772|168354910:+_chr1:168379609|168379782:+_chr1:168559606|168559738:+_chr1:168576262|168576430:+_chr1:168576551|168576698:+_chr1:168580063|168580177:+_chr1:168581052|168581381:+","UN_AL022100.1_LS0002","AL022100.1","pseudogene","no",1.92,0,0,0.007,65,0,0,"0(0)","ESCA;OV","no","TE_intersect_:168348862|chr1|168348862|168354879|L1PA2:L1:LINE|21|-","TE_intersect_:168348862|chr1|168348862|168354879|L1PA2:L1:LINE|21|-","NA","NA"]
["chr1:168354626|168379609:+","chr1:168354140|168354626:+_chr1:168379609|168379782:+_chr1:168559606|168559732:+_chr1:168576262|168576430:+_chr1:168576551|168576698:+_chr1:168580063|168580177:+_chr1:168581052|168582069:+","UN_AL031736.1_UP_LS0002","AL031736.1","pseudogene","no",2.13,0,0,0.01,95,0,0,"0(0)","LUSC","no","TE_intersect_:168348862|chr1|168348862|168354879|L1PA2:L1:LINE|21|-","TE_intersect_:168379401|chr1|168379401|168379807|MLT1A:ERVL-MaLR:LTR|215|+","NA","NA"]
["chr1:168379297|168379609:+","chr1:168377973|168379297:+_chr1:168379609|168379782:+_chr1:168580063|168580177:+_chr1:168581052|168581948:+","UN_AL031736.1_UP_LS0007","AL031736.1","pseudogene","no",1.96,0,0,0.005,51,0,0,"0(0)","ESCA","no","NA","TE_intersect_:168379401|chr1|168379401|168379807|MLT1A:ERVL-MaLR:LTR|215|+","NA","NA"]
["chr1:168379782|168417597:+","chr1:168354423|168354541:+_chr1:168379609|168379782:+_chr1:168417597|168417670:+_chr1:168504216|168505009:+","UN_AL031736.1_UP_LS0011","AL031736.1","pseudogene","no",2.36,0,0,0.027,259,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;TGCT;UCS","no","TE_intersect_:168379401|chr1|168379401|168379807|MLT1A:ERVL-MaLR:LTR|215|+","NA","NA","intron_intersect_chr1:168412936|168422130"]
["chr1:168379782|168504216:+","chr1:168354404|168354910:+_chr1:168379609|168379782:+_chr1:168504216|168505002:+","UN_AL031736.1_UP_LS0015","AL031736.1","pseudogene","no",3.26,0,0,0.028,272,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;OV;STAD","no","TE_intersect_:168379401|chr1|168379401|168379807|MLT1A:ERVL-MaLR:LTR|215|+","NA","NA","NA"]
["chr1:168379782|168559606:+","chr1:168354409|168354541:+_chr1:168379609|168379782:+_chr1:168559606|168559738:+_chr1:168576262|168576430:+_chr1:168576551|168576698:+_chr1:168580063|168580177:+_chr1:168581052|168581356:+","UN_XCL1_UP_LS0007","XCL1","protein coding gene","yes",3.58,0,0,0.053,507,0,0,"0(0)","BLCA;CESC;ESCA;HNSC;LUSC;OV;STAD;THYM;UCS","no","TE_intersect_:168379401|chr1|168379401|168379807|MLT1A:ERVL-MaLR:LTR|215|+","NA","NA","NA"]
["chr1:168379782|168576262:+","chr1:168354432|168354910:+_chr1:168379609|168379782:+_chr1:168576262|168576430:+_chr1:168576551|168576698:+_chr1:168580063|168580177:+_chr1:168581052|168581357:+","UN_XCL1_UP_LS0008","XCL1","protein coding gene","yes",3.67,0,0,0.017,163,0,0,"0(0)","BLCA;ESCA;LUSC;OV;THYM;UCS","no","TE_intersect_:168379401|chr1|168379401|168379807|MLT1A:ERVL-MaLR:LTR|215|+","NA","NA","NA"]
["chr1:168417670|168504216:+","chr1:168354423|168354541:+_chr1:168379609|168379782:+_chr1:168417597|168417670:+_chr1:168504216|168505009:+","UN_AL031736.1_UP_LS0019","AL031736.1","pseudogene","no",1.72,0,0,0.011,107,0,0,"0(0)","LUSC","no","NA","NA","intron_intersect_chr1:168412936|168422130","NA"]
["chr1:168432686|168434072:-","chr1:168399884|168403013:-_chr1:168407239|168407318:-_chr1:168412793|168412936:-_chr1:168422130|168422204:-_chr1:168432509|168432686:-_chr1:168434072|168434688:-_chr1:168464277|168464373:-_chr1:168485243|168485306:-_chr1:168485573|168485731:-_chr1:168494046|168494143:-_chr1:168495588|168495673:-","UN_AL023755.1_LS0003","AL023755.1","lncRNA gene","no",2.06,0,0,0.002,20,0,0,"0(0)","LIHC","no","TE_intersect_:168433783|chr1|168433783|168434096|MER33:hAT-Charlie:DNA|207|+","NA","NA","NA"]
["chr1:168485731|168489993:-","chr1:168457907|168462099:-_chr1:168464313|168464373:-_chr1:168485573|168485731:-_chr1:168489993|168490074:-_chr1:168494046|168494169:-_chr1:168495588|168495659:-","UN_AL023755.1_LS0014","AL023755.1","lncRNA gene","no",1.69,0,0,0.003,30,0,0,"0(0)","LIHC","no","TE_intersect_:168489927|chr1|168489927|168490099|L2c:L2:LINE|299|-","TE_intersect_:168485162|chr1|168485162|168485827|L1PA8:L1:LINE|107|+","intron_intersect_chr1:168485731|168494046","intron_intersect_chr1:168485731|168494046"]
["chr1:168485731|168495588:-","chr1:168451577|168462099:-_chr1:168464313|168464373:-_chr1:168485243|168485306:-_chr1:168485573|168485731:-_chr1:168495588|168495685:-","AL023755.1_LS010","AL023755.1","lncRNA gene","no",2.95,0,0,0.004,43,0,0,"0(0)","LIHC","yes","NA","TE_intersect_:168485162|chr1|168485162|168485827|L1PA8:L1:LINE|107|+","exon_intersect_chr1:168495588|168495644","intron_intersect_chr1:168485731|168494046"]
["chr1:168490074|168494046:-","chr1:168457907|168462099:-_chr1:168464313|168464373:-_chr1:168485573|168485731:-_chr1:168489993|168490074:-_chr1:168494046|168494169:-_chr1:168495588|168495659:-","UN_AL023755.1_LS0015","AL023755.1","lncRNA gene","no",1.67,0,0,0.003,27,0,0,"0(0)","LIHC","no","NA","TE_intersect_:168489927|chr1|168489927|168490099|L2c:L2:LINE|299|-","exon_intersect_chr1:168494046|168494124","intron_intersect_chr1:168485731|168494046"]
["chr1:168559738|168576262:+","chr1:168354409|168354541:+_chr1:168379609|168379782:+_chr1:168559606|168559738:+_chr1:168576262|168576430:+_chr1:168576551|168576698:+_chr1:168580063|168580177:+_chr1:168581052|168581356:+","UN_XCL1_UP_LS0028","XCL1","protein coding gene","yes",2.78,0,0,0.026,250,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;OV;THYM;UCS","no","TE_intersect_:168559710|chr1|168559710|168561212|L1MC3:L1:LINE|167|+","NA","NA","NA"]
["chr1:168700389|168701124:+","chr1:168700260|168700389:+_chr1:168701124|168701913:+","UN_DPT_LS0004","DPT","protein coding gene","no",9.44,0,0,0.011,104,0,0,"0(0)","CHOL;KIRC;STAD","no","TE_intersect_:168700076|chr1|168700076|168700439|MLT1A0:ERVL-MaLR:LTR|164|+","NA","intron_intersect_chr1:168696615|168701017","intron_intersect_chr1:168701124|168714221"]
["chr1:168706004|168709111:+","chr1:168705875|168706004:+_chr1:168709111|168709985:+","UN_DPT_LS0008","DPT","protein coding gene","no",3.17,0,0,0.008,80,0,0,"0(0)","KICH;KIRC","no","TE_intersect_:168705737|chr1|168705737|168706090|THE1B:ERVL-MaLR:LTR|128|+","NA","intron_intersect_chr1:168701124|168714221","intron_intersect_chr1:168701124|168714221"]
["chr1:168706004|168714109:+","chr1:168705811|168706004:+_chr1:168714109|168716242:+","UN_DPT_LS0009","DPT","protein coding gene","no",3.96,0,0,0.004,40,0,0,"0(0)","KIRC","no","TE_intersect_:168705737|chr1|168705737|168706090|THE1B:ERVL-MaLR:LTR|128|+","NA","intron_intersect_chr1:168701124|168714221","intron_intersect_chr1:168701124|168714221"]
["chr1:168706004|168776254:+","chr1:168705881|168706004:+_chr1:168776254|168777691:+","UN_AL135926.1_LS0002","AL135926.1","lncRNA gene","no",3.91,0,0,0.011,102,0,0,"0(0)","KIRC","no","TE_intersect_:168705737|chr1|168705737|168706090|THE1B:ERVL-MaLR:LTR|128|+","NA","intron_intersect_chr1:168701124|168714221","NA"]
["chr1:168710441|168714109:+","chr1:168705811|168706004:+_chr1:168709111|168709763:+_chr1:168710409|168710441:+_chr1:168714109|168716242:+","UN_DPT_LS0012","DPT","protein coding gene","no",3,0,0,0.004,39,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:168701124|168714221","intron_intersect_chr1:168701124|168714221"]
["chr1:168753241|168776254:+","chr1:168752825|168753241:+_chr1:168776254|168777789:+","UN_AL135926.1_LS0008","AL135926.1","lncRNA gene","no",2.2,0,0,0.004,34,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr1:168776410|168780933:+","chr1:168705886|168706004:+_chr1:168776254|168776410:+_chr1:168780933|168780990:+_chr1:168782870|168782924:+_chr1:168783953|168784113:+_chr1:168787037|168787228:+_chr1:168788781|168788889:+_chr1:168792331|168792886:+","UN_AL135926.1_LS0019","AL135926.1","lncRNA gene","no",13.67,0,0,0.005,48,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr1:168780990|168782870:+","chr1:168705886|168706004:+_chr1:168776254|168776410:+_chr1:168780933|168780990:+_chr1:168782870|168782924:+_chr1:168783953|168784113:+_chr1:168787037|168787228:+_chr1:168788781|168788889:+_chr1:168792331|168792886:+","UN_AL135926.1_LS0024","AL135926.1","lncRNA gene","no",10.38,0,0,0.007,63,0,0,"0(0)","KIRC","no","TE_intersect_:168780954|chr1|168780954|168781127|MER45A:hAT-Tip100:DNA|271|-","TE_intersect_:168782837|chr1|168782837|168783257|L2c:L2:LINE|352|+","NA","NA"]
["chr1:168782924|168783953:+","chr1:168705886|168706004:+_chr1:168776254|168776410:+_chr1:168780933|168780990:+_chr1:168782870|168782924:+_chr1:168783953|168784113:+_chr1:168787037|168787228:+_chr1:168788781|168788889:+_chr1:168792331|168792886:+","UN_AL135926.1_LS0027","AL135926.1","lncRNA gene","no",9.42,0,0,0.008,73,0,0,"0(0)","KIRC","no","TE_intersect_:168782837|chr1|168782837|168783257|L2c:L2:LINE|352|+","NA","NA","NA"]
["chr1:168784113|168787037:+","chr1:168705886|168706004:+_chr1:168776254|168776410:+_chr1:168780933|168780990:+_chr1:168782870|168782924:+_chr1:168783953|168784113:+_chr1:168787037|168787228:+_chr1:168788781|168788889:+_chr1:168792331|168792886:+","UN_AL135926.1_LS0028","AL135926.1","lncRNA gene","no",9.3,0,0,0.011,107,0,0,"0(0)","KIRC","no","NA","TE_intersect_:168786791|chr1|168786791|168787303|MLT1L:ERVL-MaLR:LTR|285|+","NA","exon_intersect_chr1:168786939|168787228"]
["chr1:168786869|168787037:+","chr1:168786707|168786869:+_chr1:168787037|168787228:+_chr1:168788781|168788889:+_chr1:168792331|168792886:+","UN_AL135926.1_LS0030","AL135926.1","lncRNA gene","no",3.47,0,0,0.023,218,0,0,"0(0)","KIRC;LUSC;SARC;UCS","no","TE_intersect_:168786791|chr1|168786791|168787303|MLT1L:ERVL-MaLR:LTR|285|+","TE_intersect_:168786791|chr1|168786791|168787303|MLT1L:ERVL-MaLR:LTR|285|+","NA","exon_intersect_chr1:168786939|168787228"]
["chr1:168786959|168787037:+","chr1:168786688|168786959:+_chr1:168787037|168787228:+_chr1:168788781|168788889:+_chr1:168792331|168792886:+","UN_LINC00626_LS0001","LINC00626","lncRNA gene","no",2.33,0,0,0.006,58,0,0,"0(0)","LUSC","no","TE_intersect_:168786791|chr1|168786791|168787303|MLT1L:ERVL-MaLR:LTR|285|+","TE_intersect_:168786791|chr1|168786791|168787303|MLT1L:ERVL-MaLR:LTR|285|+","exon_intersect_chr1:168786939|168787228","exon_intersect_chr1:168786939|168787228"]
["chr1:168787228|168788795:+","chr1:168786683|168786796:+_chr1:168787037|168787228:+_chr1:168788795|168788889:+_chr1:168792331|168792886:+","UN_LINC00626_LS0003","LINC00626","lncRNA gene","no",6.09,0,0,0.025,242,0,0,"0(0)","KIRC;LUSC;UCEC;UCS","no","TE_intersect_:168786791|chr1|168786791|168787303|MLT1L:ERVL-MaLR:LTR|285|+","NA","intron_intersect_chr1:168787228|168788781","exon_intersect_chr1:168788781|168788889"]
["chr1:168804112|168868977:+","chr1:168803992|168804112:+_chr1:168868977|168873757:+","UN_AL135926.1_LS0032","AL135926.1","lncRNA gene","no",5.39,0,0,0.005,52,0,0,"0(0)","STAD","no","NA","NA","NA","NA"]
["chr1:169368710|169369473:+","chr1:169368492|169368710:+_chr1:169369473|169369550:+_chr1:169376540|169376894:+","UN_BLZF1_LS0003","BLZF1","protein coding gene","no",1.12,0,0,0.006,58,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:169368362|169369473","exon_intersect_chr1:169369473|169369550"]
["chr1:169514482|169515444:-","chr1:169514163|169514482:-_chr1:169515444|169515626:-_chr1:169518412|169518563:-_chr1:169520520|169520664:-_chr1:169523197|169523352:-_chr1:169523801|169523904:-_chr1:169524837|169524908:-_chr1:169525901|169526017:-_chr1:169527915|169528094:-_chr1:169529608|169529818:-_chr1:169530786|169531022:-_chr1:169536506|169536680:-_chr1:169540294|169543114:-_chr1:169544296|169544508:-_chr1:169546442|169546592:-_chr1:169549801|169550015:-_chr1:169550640|169550739:-_chr1:169552557|169552734:-_chr1:169555182|169555347:-_chr1:169556646|169557146:-","UN_F5_LS0002","F5","protein coding gene","no",25.97,0,0,0.004,41,0,0,"0(0)","CHOL;LIHC","no","NA","NA","exon_intersect_chr1:169515444|169515745","intron_intersect_chr1:169514459|169515444"]
["chr1:169541009|169541253:+","chr1:169540592|169541009:+_chr1:169541253|169541826:+","UN_F5_LS0077","F5","protein coding gene","no",3.63,0,0,0.003,24,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:169540294|169543114","exon_intersect_chr1:169540294|169543114"]
["chr1:169662523|169683392:+","chr1:169662023|169662523:+_chr1:169683392|169683625:+_chr1:169683756|169688850:+","UN_C1orf112_LS0002","C1orf112","protein coding gene","no",4.4,0,0,0.002,17,0,0,"0(0)","LAML","no","TE_intersect_:169662412|chr1|169662412|169667757|HERV9NC-int:ERV1:LTR|45|+","TE_intersect_:169683069|chr1|169683069|169683479|LTR7:ERV1:LTR|117|+","intron_intersect_chr1:169662523|169683469","intron_intersect_chr1:169662523|169683469"]
["chr1:169685413|169686981:+","chr1:169684925|169685413:+_chr1:169686981|169688851:+","UN_C1orf112_LS0007","C1orf112","protein coding gene","no",2.72,0,0,0.003,27,0,0,"0(0)","DLBC","no","TE_intersect_:169683479|chr1|169683479|169686281|HERVH-int:ERV1:LTR|132|+","TE_intersect_:169686865|chr1|169686865|169687291|HERVH-int:ERV1:LTR|170|+","intron_intersect_chr1:169683932|169690667","intron_intersect_chr1:169683932|169690667"]
["chr1:16981245|16981514:-","chr1:16974502|16975023:-_chr1:16975269|16975342:-_chr1:16975643|16975730:-_chr1:16976501|16976545:-_chr1:16976708|16976794:-_chr1:16976897|16976923:-_chr1:16977109|16977198:-_chr1:16978237|16978314:-_chr1:16980587|16981245:-_chr1:16981514|16981633:-","UN_AL049569.1_LS0003","AL049569.1","lncRNA gene","no",4.26,0,0,0.011,108,0,0,"0(0)","ESCA;HNSC","no","TE_intersect_:16981329|chr1|16981329|16981567|L2b:L2:LINE|291|+","TE_intersect_:16981145|chr1|16981145|16981282|AluJr:Alu:SINE|175|-","intron_intersect_chr1:16980835|16985958","intron_intersect_chr1:16980835|16985958"]
["chr1:169853652|169854290:+","chr1:169795049|169795213:+_chr1:169798919|169798958:+_chr1:169800883|169800971:+_chr1:169802621|169802725:+_chr1:169803169|169803309:+_chr1:169804075|169804240:+_chr1:169806004|169806088:+_chr1:169807791|169807929:+_chr1:169821679|169821759:+_chr1:169823408|169823472:+_chr1:169827051|169827199:+_chr1:169827711|169827840:+_chr1:169829263|169829449:+_chr1:169830259|169830341:+_chr1:169830696|169830747:+_chr1:169832417|169832506:+_chr1:169836927|169837112:+_chr1:169842417|169842539:+_chr1:169843674|169843769:+_chr1:169847690|169847803:+_chr1:169849500|169849604:+_chr1:169850265|169850345:+_chr1:169851817|169851936:+_chr1:169852790|169853652:+_chr1:169854290|169854336:+","UN_SCYL3_LS0011","SCYL3","protein coding gene","no",1.62,0,0,0.01,92,0,0,"0(0)","CHOL;DLBC","no","NA","NA","exon_intersect_chr1:169849631|169853772","exon_intersect_chr1:169854270|169854964"]
["chr1:169853652|169855865:+","chr1:169804193|169804240:+_chr1:169806004|169806088:+_chr1:169807791|169807929:+_chr1:169821679|169821759:+_chr1:169823408|169823472:+_chr1:169827051|169827199:+_chr1:169827711|169827840:+_chr1:169829263|169829449:+_chr1:169830259|169830341:+_chr1:169830696|169830747:+_chr1:169832417|169832506:+_chr1:169836927|169837112:+_chr1:169842417|169842539:+_chr1:169843674|169843769:+_chr1:169847690|169847803:+_chr1:169849500|169849604:+_chr1:169850265|169850345:+_chr1:169851817|169851936:+_chr1:169852790|169853652:+_chr1:169855865|169855894:+","UN_SCYL3_LS0014","SCYL3","protein coding gene","no",1.46,0,0,0.015,145,0,0,"0(0)","ESCA;OV;STAD;THYM","no","NA","NA","exon_intersect_chr1:169849631|169853772","exon_intersect_chr1:169855796|169855957"]
["chr1:169855631|169855865:+","chr1:169855269|169855631:+_chr1:169855865|169855963:+_chr1:169862562|169862761:+_chr1:169871399|169873375:+","UN_SCYL3_LS0021","SCYL3","protein coding gene","no",0.56,0,0,0.013,122,0,0,"0(0)","CESC;THYM","no","NA","NA","intron_intersect_chr1:169854964|169855796","exon_intersect_chr1:169855796|169855957"]
["chr1:16986133|16986168:+","chr1:16985958|16986133:+_chr1:16986168|16986267:+","UN_ATP13A2_LS0002","ATP13A2","protein coding gene","no",5.08,0,0,0.003,33,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:16985958|16986358","exon_intersect_chr1:16985958|16986358"]
["chr1:169964578|169990084:+","chr1:169964415|169964578:+_chr1:169990084|169990192:+_chr1:169996726|169997318:+","UN_KIFAP3_LS0015","KIFAP3","protein coding gene","no",2.65,0,0,0.007,65,0,0,"0(0)","SKCM;UCS","no","NA","NA","intron_intersect_chr1:169961235|169972513","exon_intersect_chr1:169990067|169990196"]
["chr1:169990192|169996726:+","chr1:169989959|169990192:+_chr1:169996726|169997448:+","UN_KIFAP3_LS0021","KIFAP3","protein coding gene","no",10.77,0,0,0.01,92,0,0,"0(0)","SKCM;UCS","no","NA","NA","exon_intersect_chr1:169990067|169990196","intron_intersect_chr1:169992255|170016462"]
["chr1:170160693|170166594:+","chr1:170146010|170146261:+_chr1:170157969|170158117:+_chr1:170160518|170160693:+_chr1:170166594|170166751:+_chr1:170167486|170168883:+","UN_METTL11B_LS0007","METTL11B","protein coding gene","no",3.9,0,0,0.016,153,0,0,"0(0)","OV;PAAD","no","NA","NA","intron_intersect_chr1:170160693|170161606","exon_intersect_chr1:170166502|170166751"]
["chr1:170241285|170241386:+","chr1:170174403|170174706:+_chr1:170226919|170227058:+_chr1:170240230|170240322:+_chr1:170241065|170241285:+_chr1:170241386|170241549:+","UN_GORAB_UP_LS0004","GORAB","protein coding gene","yes",5.36,0,0,0.01,94,0,0,"0(0)","LIHC","no","NA","NA","exon_intersect_chr1:170241065|170241287","NA"]
["chr1:170510420|170511384:-","chr1:170509048|170510420:-_chr1:170511384|170511542:-_chr1:170517594|170517703:-_chr1:170526129|170526262:-","UN_AL354732.1_LS0006","AL354732.1","lncRNA gene","no",2.31,0,0,0.002,18,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:170510420|170517594","intron_intersect_chr1:170510420|170517594"]
["chr1:170517703|170538199:-","chr1:170460453|170462419:-_chr1:170517594|170517703:-_chr1:170538199|170538634:-","UN_HAUS4P1_UP_LS0003","HAUS4P1","pseudogene","no",1.66,0,0,0.017,165,0,0,"0(0)","BRCA;ESCA;OV;SARC","no","TE_intersect_:170538033|chr1|170538033|170538257|MIRc:MIR:SINE|312|-","NA","intron_intersect_chr1:170536421|170539062","exon_intersect_chr1:170517594|170517706"]
["chr1:17074949|17075124:-","chr1:17066761|17069277:-_chr1:17070088|17070216:-_chr1:17071406|17071491:-_chr1:17074856|17074949:-_chr1:17075124|17075406:-","UN_PADI2_LS0006","PADI2","protein coding gene","yes",2.46,0,0,0.004,38,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:17074856|17075823","exon_intersect_chr1:17074856|17075823"]
["chr1:17074949|17075525:-","chr1:17066761|17069277:-_chr1:17070088|17070216:-_chr1:17071406|17071491:-_chr1:17074856|17074949:-_chr1:17075525|17075558:-","UN_PADI2_LS0007","PADI2","protein coding gene","yes",1.9,0,0,0.01,98,0,0,"0(0)","BRCA;CHOL;STAD","no","NA","NA","exon_intersect_chr1:17074856|17075823","exon_intersect_chr1:17074856|17075823"]
["chr1:170856887|170886856:+","chr1:170856652|170856887:+_chr1:170886856|170887028:+","UN_MROH9_UP_LS0006","MROH9","protein coding gene","no",3.58,0,0,0.008,72,0,0,"0(0)","ACC;GBM;LGG","no","TE_intersect_:170855359|chr1|170855359|170857063|L1MC4a:L1:LINE|201|+","NA","NA","NA"]
["chr1:17113585|17113671:+","chr1:17106787|17106966:+_chr1:17110806|17110838:+_chr1:17111776|17111861:+_chr1:17113426|17113585:+_chr1:17113671|17113845:+_chr1:17115255|17117390:+","UN_PADI2_LS0025","PADI2","protein coding gene","yes",2.74,0,0,0.002,18,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:17105061|17119280","intron_intersect_chr1:17105061|17119280"]
["chr1:171159913|171161158:+","chr1:171159833|171159913:+_chr1:171161158|171161568:+","UN_FMO6P_LS0014","FMO6P","pseudogene","no",2.39,0,0,0.005,48,0,0,"0(0)","KIRP","no","TE_intersect_:171159637|chr1|171159637|171160241|LTR8:ERV1:LTR|198|-","NA","intron_intersect_chr1:171154214|171161064","exon_intersect_chr1:171161064|171161568"]
["chr1:171199515|171213798:-","chr1:171199244|171199515:-_chr1:171213798|171214597:-","UN_AL021026.1_LS0001","AL021026.1","lncRNA gene","no",5.3,0,0,0.005,50,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr1:171212683|171223997","intron_intersect_chr1:171199515|171203865"]
["chr1:171331832|171332735:-","chr1:171331694|171331832:-_chr1:171332735|171332839:-_chr1:171351162|171351331:-_chr1:171360279|171360360:-","UN_FMO4_LS0013","FMO4","protein coding gene","no",1.16,0,0,0.011,103,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:171332709|171333147","intron_intersect_chr1:171331782|171332709"]
["chr1:17136628|17140023:-","chr1:17133718|17136628:-_chr1:17140023|17140143:-","UN_PADI2_UP_LS0009","PADI2","protein coding gene","yes",9.85,0,0,0.008,72,0,0,"0(0)","KIRC","no","TE_intersect_:17139943|chr1|17139943|17140400|MSTC:ERVL-MaLR:LTR|122|-","NA","NA","NA"]
["chr1:171557768|171557898:-","chr1:171557226|171557415:-_chr1:171557461|171557768:-_chr1:171557898|171558060:-","UN_PRRC2C_LS0176","PRRC2C","protein coding gene","no",2.03,0,0,0.004,42,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:171557240|171558143","exon_intersect_chr1:171557240|171558143"]
["chr1:171557813|171557898:-","chr1:171557219|171557415:-_chr1:171557461|171557652:-_chr1:171557689|171557813:-_chr1:171557898|171558261:-","UN_PRRC2C_LS0185","PRRC2C","protein coding gene","no",0.57,0,0,0.004,38,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:171557240|171558143","exon_intersect_chr1:171557240|171558143"]
["chr1:171557838|171557869:-","chr1:171557244|171557460:-_chr1:171557509|171557838:-_chr1:171557869|171557879:-","UN_PRRC2C_LS0195","PRRC2C","protein coding gene","no",1.07,0,0,0.004,36,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:171557240|171558143","exon_intersect_chr1:171557240|171558143"]
["chr1:171601204|171604303:+","chr1:171600820|171601204:+_chr1:171604303|171604377:+_chr1:171614798|171615005:+_chr1:171623841|171623978:+_chr1:171650338|171651964:+","UN_MYOCOS_LS0001","MYOCOS","protein coding gene","no",3.15,0,0,0.003,28,0,0,"0(0)","KIRC","no","TE_intersect_:171600923|chr1|171600923|171601846|Harlequin-int:ERV1:LTR|92|+","TE_intersect_:171602818|chr1|171602818|171606351|Harlequin-int:ERV1:LTR|116|+","NA","NA"]
["chr1:171601204|171623841:+","chr1:171600801|171601204:+_chr1:171623841|171623978:+_chr1:171636193|171636342:+","UN_MYOCOS_LS0003","MYOCOS","protein coding gene","no",4.87,0,0,0.005,45,0,0,"0(0)","KIRC","no","TE_intersect_:171600923|chr1|171600923|171601846|Harlequin-int:ERV1:LTR|92|+","NA","NA","NA"]
["chr1:171606467|171615545:+","chr1:171600813|171606467:+_chr1:171615545|171616458:+","UN_MYOCOS_LS0004","MYOCOS","protein coding gene","no",5.6,0,0,0.021,202,0,0,"0(0)","KIRC","no","TE_intersect_:171606351|chr1|171606351|171606825|LTR2B:ERV1:LTR|73|+","TE_intersect_:171615431|chr1|171615431|171615903|LTR2B:ERV1:LTR|34|+","NA","NA"]
["chr1:171623978|171636193:+","chr1:171600804|171604377:+_chr1:171614798|171615005:+_chr1:171623841|171623978:+_chr1:171636193|171636290:+","UN_MYOCOS_LS0006","MYOCOS","protein coding gene","no",3.24,0,0,0.01,94,0,0,"0(0)","KIRC","no","NA","NA","NA","exon_intersect_chr1:171635417|171636709"]
["chr1:171623978|171752921:+","chr1:171600794|171604377:+_chr1:171614798|171615005:+_chr1:171623841|171623978:+_chr1:171752921|171752980:+_chr1:171762044|171763207:+","UN_Z98751.2_UP_LS0004","Z98751.2","pseudogene","no",3.61,0,0,0.007,67,0,0,"0(0)","KIRC","no","NA","TE_intersect_:171752776|chr1|171752776|171752958|HAL1ME:L1:LINE|333|-","NA","NA"]
["chr1:171752980|171762044:+","chr1:171600794|171604377:+_chr1:171614798|171615005:+_chr1:171623841|171623978:+_chr1:171752921|171752980:+_chr1:171762044|171763207:+","UN_Z98751.2_UP_LS0005","Z98751.2","pseudogene","no",2.69,0,0,0.007,67,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr1:171762302|171778001:+","chr1:171762074|171762302:+_chr1:171778001|171778135:+_chr1:171779018|171779052:+_chr1:171781231|171782120:+_chr1:171783740|171784499:+_chr1:171785879|171786078:+_chr1:171787735|171787930:+_chr1:171790452|171790616:+_chr1:171792017|171792235:+_chr1:171794396|171794527:+_chr1:171796482|171796903:+","UN_METTL13_UP_LS0001","METTL13","protein coding gene","no",0.99,0,0,0.007,65,0,0,"0(0)","KIRC","no","NA","TE_intersect_:171777812|chr1|171777812|171778082|MLT1D:ERVL-MaLR:LTR|186|-","exon_intersect_chr1:171762074|171762524","NA"]
["chr1:17192706|17192965:+","chr1:17192586|17192706:+_chr1:17192965|17193165:+_chr1:17198028|17198351:+","UN_AL590644.1_LS0003","AL590644.1","lncRNA gene","no",2.6,0,0,0.013,123,0,0,"0(0)","KIRC","no","TE_intersect_:17192298|chr1|17192298|17192733|LTR51:ERV1:LTR|188|+","NA","intron_intersect_chr1:17189930|17192965","exon_intersect_chr1:17192965|17193165"]
["chr1:17192873|17192965:+","chr1:17192646|17192873:+_chr1:17192965|17193165:+_chr1:17193291|17193340:+_chr1:17195443|17197647:+","UN_AL590644.1_LS0004","AL590644.1","lncRNA gene","no",2.03,0,0,0.021,201,0,0,"0(0)","KIRC;MESO","no","NA","NA","intron_intersect_chr1:17189930|17192965","exon_intersect_chr1:17192965|17193165"]
["chr1:17193165|17198028:+","chr1:17192586|17192706:+_chr1:17192965|17193165:+_chr1:17198028|17198351:+","UN_PADI1_UP_LS0002","PADI1","protein coding gene","no",3.38,0,0,0.017,162,0,0,"0(0)","KIRC;MESO","no","NA","TE_intersect_:17197954|chr1|17197954|17198034|MIR:MIR:SINE|327|-","intron_intersect_chr1:17193165|17193291","NA"]
["chr1:17195601|17198028:+","chr1:17192621|17192873:+_chr1:17192965|17193165:+_chr1:17193291|17193340:+_chr1:17195443|17195601:+_chr1:17198028|17198365:+","UN_AL590644.3_LS0002","AL590644.3","lncRNA gene","no",2.52,0,0,0.006,57,0,0,"0(0)","KIRC","no","NA","TE_intersect_:17197954|chr1|17197954|17198034|MIR:MIR:SINE|327|-","exon_intersect_chr1:17193291|17197617","NA"]
["chr1:172035838|172048606:-","chr1:172012162|172012238:-_chr1:172035665|172035838:-_chr1:172048606|172048702:-_chr1:172055825|172056000:-","UN_DNM3_LS0010","DNM3","protein coding gene","no",3.46,0,0,0.031,295,0,0,"0(0)","ESCA;LUAD;OV;STAD","no","NA","NA","intron_intersect_chr1:172044452|172048612","intron_intersect_chr1:172033265|172038319"]
["chr1:172048702|172055825:-","chr1:172048621|172048702:-_chr1:172055825|172056008:-","UN_DNM3_LS0013","DNM3","protein coding gene","no",3.13,0,0,0.028,268,0,0,"0(0)","ESCA;LUAD;OV;STAD","no","NA","NA","intron_intersect_chr1:172048750|172068819","exon_intersect_chr1:172048612|172048750"]
["chr1:172211887|172253573:+","chr1:172211698|172211887:+_chr1:172253573|172253682:+_chr1:172308728|172308839:+_chr1:172379018|172379182:+_chr1:172387133|172387359:+_chr1:172388573|172388809:+_chr1:172418281|172418466:+","UN_DNM3_LS0040","DNM3","protein coding gene","no",7.1,0,0,0.002,21,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:172144794|172253573","exon_intersect_chr1:172253573|172253682"]
["chr1:172212390|172212881:-","chr1:172210674|172212390:-_chr1:172212881|172213824:-","UN_DNM3_LS0041","DNM3","protein coding gene","no",3.39,0,0,0.002,23,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:172144794|172253573","intron_intersect_chr1:172144794|172253573"]
["chr1:172255636|172308728:+","chr1:172255174|172255636:+_chr1:172308728|172308839:+_chr1:172379018|172379182:+_chr1:172387133|172387359:+_chr1:172388573|172388809:+_chr1:172407772|172415282:+","UN_DNM3_LS0049","DNM3","protein coding gene","no",3.99,0,0,0.006,58,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:172253682|172308728","exon_intersect_chr1:172308728|172311284"]
["chr1:172255671|172308728:+","chr1:172255126|172255671:+_chr1:172308728|172308839:+_chr1:172379018|172379182:+_chr1:172387133|172387359:+_chr1:172388573|172388809:+_chr1:172418281|172418466:+","UN_DNM3_LS0050","DNM3","protein coding gene","no",4.67,0,0,0.032,310,0,0,"0(0)","BRCA;HNSC;LUAD;OV;PAAD;STAD;UCS","no","NA","NA","intron_intersect_chr1:172253682|172308728","exon_intersect_chr1:172308728|172311284"]
["chr1:172283756|172357887:-","chr1:172280505|172283756:-_chr1:172357887|172357991:-","UN_DNM3_LS0054","DNM3","protein coding gene","no",2.79,0,0,0.004,37,0,0,"0(0)","OV","no","NA","TE_intersect_:172283479|chr1|172283479|172283787|AluSc:Alu:SINE|104|+","intron_intersect_chr1:172323340|172366540","intron_intersect_chr1:172253682|172308728"]
["chr1:17230693|17232819:+","chr1:17205112|17205309:+_chr1:17222290|17224428:+_chr1:17225811|17225928:+_chr1:17226033|17226158:+_chr1:17226267|17226420:+_chr1:17228625|17228797:+_chr1:17228948|17229051:+_chr1:17230085|17230208:+_chr1:17230572|17230693:+_chr1:17232819|17232970:+_chr1:17238616|17238709:+_chr1:17239704|17240760:+_chr1:17242192|17242405:+_chr1:17244010|17246007:+","UN_PADI1_LS0021","PADI1","protein coding gene","no",11.87,0,0,0.002,22,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:17230679|17232819","exon_intersect_chr1:17232819|17232970"]
["chr1:17238709|17238845:+","chr1:17205126|17205309:+_chr1:17222290|17222470:+_chr1:17223621|17223693:+_chr1:17224367|17224428:+_chr1:17225811|17225928:+_chr1:17226033|17226158:+_chr1:17228625|17228797:+_chr1:17228948|17229097:+_chr1:17230085|17230208:+_chr1:17230572|17230679:+_chr1:17232819|17232970:+_chr1:17237314|17237458:+_chr1:17238616|17238709:+_chr1:17238845|17238936:+_chr1:17239704|17240760:+_chr1:17244010|17246004:+","UN_PADI1_LS0026","PADI1","protein coding gene","no",4.84,0,0,0.002,20,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:17238709|17239632","intron_intersect_chr1:17238709|17239632"]
["chr1:17238936|17239704:+","chr1:17205126|17205309:+_chr1:17222290|17222470:+_chr1:17223621|17223693:+_chr1:17224367|17224428:+_chr1:17225811|17225928:+_chr1:17226033|17226158:+_chr1:17228625|17228797:+_chr1:17228948|17229097:+_chr1:17230085|17230208:+_chr1:17230572|17230679:+_chr1:17232819|17232970:+_chr1:17237314|17237458:+_chr1:17238616|17238709:+_chr1:17238845|17238936:+_chr1:17239704|17240760:+_chr1:17244010|17246004:+","UN_PADI1_LS0028","PADI1","protein coding gene","no",4.63,0,0,0.003,26,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:17238709|17239632","exon_intersect_chr1:17239632|17240760"]
["chr1:17240760|17242114:+","chr1:17205126|17205309:+_chr1:17222290|17223693:+_chr1:17224367|17224428:+_chr1:17225811|17225928:+_chr1:17226033|17226158:+_chr1:17228625|17228797:+_chr1:17228948|17229051:+_chr1:17230085|17230208:+_chr1:17230572|17230679:+_chr1:17232819|17232970:+_chr1:17237314|17238709:+_chr1:17239704|17240760:+_chr1:17242114|17242405:+_chr1:17244010|17246004:+","UN_PADI1_LS0033","PADI1","protein coding gene","no",10.37,0,0,0.004,40,0,0,"0(0)","PAAD","no","NA","TE_intersect_:17242075|chr1|17242075|17242266|MER20:hAT-Charlie:DNA|201|-","intron_intersect_chr1:17240760|17244010","intron_intersect_chr1:17240760|17244010"]
["chr1:172456489|172465299:+","chr1:172452893|172453189:+_chr1:172456415|172456489:+_chr1:172465299|172465363:+_chr1:172468449|172468827:+","UN_C1orf105_LS0012","C1orf105","protein coding gene","no",9.73,0.19,0,0.006,61,0.001,1,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:172456489|172462178","exon_intersect_chr1:172465299|172465363"]
["chr1:172591071|172608747:+","chr1:172569027|172569142:+_chr1:172570047|172570171:+_chr1:172570663|172570730:+_chr1:172573891|172573998:+_chr1:172575518|172575623:+_chr1:172577764|172577819:+_chr1:172578298|172578389:+_chr1:172579202|172579267:+_chr1:172588760|172589926:+_chr1:172590984|172591071:+_chr1:172608747|172608802:+_chr1:172609816|172611831:+","UN_SUCO_LS0028","SUCO","protein coding gene","no",3.25,0,0,0.006,61,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:172591071|172600064","exon_intersect_chr1:172608313|172608802"]
["chr1:172816128|172817214:-","chr1:172815275|172816128:-_chr1:172817214|172817347:-_chr1:172817553|172817697:-_chr1:172835251|172835308:-","UN_AL031599.1_LS0007","AL031599.1","lncRNA gene","no",2.77,0,0,0.005,45,0,0,"0(0)","KIRC","no","NA","TE_intersect_:172816101|chr1|172816101|172816170|L1M4:L1:LINE|164|+","intron_intersect_chr1:172776127|172885947","intron_intersect_chr1:172776127|172885947"]
["chr1:172848279|172851215:-","chr1:172830792|172831372:-_chr1:172835251|172835377:-_chr1:172848152|172848279:-_chr1:172851215|172851482:-_chr1:172924599|172924733:-_chr1:172933501|172933682:-","UN_AL031599.1_LS0016","AL031599.1","lncRNA gene","no",2.28,0,0,0.006,58,0,0,"0(0)","KIRC","no","TE_intersect_:172850480|chr1|172850480|172851416|LTR19-int:ERV1:LTR|104|-","TE_intersect_:172847552|chr1|172847552|172849787|LTR19-int:ERV1:LTR|97|-","intron_intersect_chr1:172776127|172885947","intron_intersect_chr1:172776127|172885947"]
["chr1:172851482|172924599:-","chr1:172830792|172831372:-_chr1:172835251|172835377:-_chr1:172848152|172848279:-_chr1:172851215|172851482:-_chr1:172924599|172924733:-_chr1:172933501|172933682:-","UN_AL031599.1_LS0017","AL031599.1","lncRNA gene","no",2.61,0,0,0.005,49,0,0,"0(0)","KIRC","no","TE_intersect_:172924293|chr1|172924293|172926737|Tigger1:TcMar-Tigger:DNA|133|-","TE_intersect_:172851419|chr1|172851419|172852050|PABL_A:ERV1:LTR|56|-","intron_intersect_chr1:172907684|173004282","intron_intersect_chr1:172776127|172885947"]
["chr1:172924733|172933501:-","chr1:172830792|172831372:-_chr1:172835251|172835377:-_chr1:172848152|172848279:-_chr1:172851215|172851482:-_chr1:172924599|172924733:-_chr1:172933501|172933682:-","UN_AL031599.1_LS0019","AL031599.1","lncRNA gene","no",2.04,0,0,0.009,89,0,0,"0(0)","KIRC","no","NA","TE_intersect_:172924293|chr1|172924293|172926737|Tigger1:TcMar-Tigger:DNA|133|-","intron_intersect_chr1:172907684|173004282","intron_intersect_chr1:172907684|173004282"]
["chr1:173013719|173016313:+","chr1:173003663|173004165:+_chr1:173004282|173004435:+_chr1:173005186|173005302:+_chr1:173009480|173009565:+_chr1:173012534|173013177:+_chr1:173013602|173013719:+_chr1:173016313|173016524:+_chr1:173023498|173023573:+_chr1:173025354|173035836:+","UN_AL031599.1_LS0029","AL031599.1","lncRNA gene","no",5.63,0,0,0.001,12,0,0,"0(0)","MESO","no","TE_intersect_:173013636|chr1|173013636|173014019|MLT1A1-int:ERVL-MaLR:LTR|263|+","TE_intersect_:173016181|chr1|173016181|173016333|MIRb:MIR:SINE|312|+","intron_intersect_chr1:173004435|173016313","exon_intersect_chr1:173016313|173016524"]
["chr1:173016524|173017673:+","chr1:173003510|173003600:+_chr1:173004282|173004435:+_chr1:173013602|173013719:+_chr1:173016313|173016524:+_chr1:173017673|173019449:+","UN_AL031599.1_LS0030","AL031599.1","lncRNA gene","no",4.96,0,0,0.002,16,0,0,"0(0)","MESO","no","TE_intersect_:173016442|chr1|173016442|173016910|L3:CR1:LINE|312|+","NA","intron_intersect_chr1:173016524|173023498","intron_intersect_chr1:173016524|173023498"]
["chr1:173188569|173190442:-","chr1:173183731|173186865:-_chr1:173188521|173188569:-_chr1:173190442|173190601:-","UN_TNFSF4_LS0002","TNFSF4","protein coding gene","no",1.04,0,0,0.004,34,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr1:173188569|173205311","intron_intersect_chr1:173188569|173205311"]
["chr1:173442097|173442419:-","chr1:173418074|173418622:-_chr1:173440463|173440750:-_chr1:173441919|173442097:-_chr1:173442419|173442538:-","UN_AL645568.1_LS0018","AL645568.1","lncRNA gene","no",2.12,0,0,0.005,46,0,0,"0(0)","TGCT","no","NA","TE_intersect_:173442064|chr1|173442064|173442273|MER63B:hAT-Blackjack:DNA|232|-","intron_intersect_chr1:173442097|173460378","intron_intersect_chr1:173442097|173460378"]
["chr1:173477136|173477332:+","chr1:173476597|173477136:+_chr1:173477332|173477492:+_chr1:173481326|173481482:+_chr1:173485361|173485507:+_chr1:173486255|173486401:+_chr1:173487735|173488015:+","UN_AL139142.1_UP_LS0001","AL139142.1","lncRNA gene","no",0.85,0,0,0.003,33,0,0,"0(0)","DLBC","no","NA","NA","NA","exon_intersect_chr1:173477266|173477492"]
["chr1:17356127|17356232:+","chr1:17348730|17348785:+_chr1:17354533|17354687:+_chr1:17355983|17356127:+_chr1:17356232|17356459:+_chr1:17358838|17358908:+_chr1:17359280|17359408:+_chr1:17363522|17364004:+","UN_PADI4_LS0006","PADI4","protein coding gene","no",1.5,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:17356127|17356357","intron_intersect_chr1:17356127|17356357"]
["chr1:173596611|173597904:-","chr1:173595763|173596611:-_chr1:173597904|173598032:-_chr1:173600117|173600217:-_chr1:173601650|173601855:-_chr1:173602751|173603053:-","UN_SLC9C2_LS0014","SLC9C2","protein coding gene","no",1.35,0,0,0.018,174,0,0,"0(0)","ACC;MESO;OV","no","NA","TE_intersect_:173596605|chr1|173596605|173597457|L1MEd:L1:LINE|246|+","exon_intersect_chr1:173597904|173598032","exon_intersect_chr1:173596418|173596678"]
["chr1:173598032|173602751:-","chr1:173521044|173521399:-_chr1:173523969|173524094:-_chr1:173524779|173524927:-_chr1:173526663|173526714:-_chr1:173529905|173530054:-_chr1:173573182|173573325:-_chr1:173583506|173583622:-_chr1:173597904|173598032:-_chr1:173602751|173603053:-","UN_SLC9C2_LS0015","SLC9C2","protein coding gene","no",2.06,0,0,0.005,47,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:173602751|173603094","intron_intersect_chr1:173598032|173600117"]
["chr1:173602913|173612624:+","chr1:173555066|173555318:+_chr1:173602772|173602913:+_chr1:173612624|173613998:+","UN_AL139142.2_LS0001","AL139142.2","protein coding gene","no",2.86,0,0,0.004,38,0,0,"0(0)","OV","no","NA","TE_intersect_:173612572|chr1|173612572|173614262|SVA_D:SVA:Retroposon|75|+","exon_intersect_chr1:173602751|173603094","exon_intersect_chr1:173612624|173612772"]
["chr1:173638034|173640255:+","chr1:173637710|173638034:+_chr1:173640255|173646831:+","UN_ANKRD45_LS0004","ANKRD45","protein coding gene","no",4.73,0,0,0.006,60,0,0,"0(0)","THYM","no","TE_intersect_:173637824|chr1|173637824|173638104|HERVIP10B3-int:ERV1:LTR|222|+","TE_intersect_:173638639|chr1|173638639|173642448|HERVIP10B3-int:ERV1:LTR|281|+","intron_intersect_chr1:173637134|173646846","intron_intersect_chr1:173637134|173646846"]
["chr1:173638034|173660103:+","chr1:173637711|173638034:+_chr1:173660103|173668015:+","UN_ANKRD45_LS0007","ANKRD45","protein coding gene","no",4.14,0,0,0.002,22,0,0,"0(0)","THYM","no","TE_intersect_:173637824|chr1|173637824|173638104|HERVIP10B3-int:ERV1:LTR|222|+","TE_intersect_:173660093|chr1|173660093|173660201|U13_:snRNA:snRNA|148|-","intron_intersect_chr1:173637134|173646846","intron_intersect_chr1:173659433|173669817"]
["chr1:173638034|173671234:+","chr1:173637711|173638034:+_chr1:173671234|173671334:+_chr1:173678064|173681207:+","UN_KLHL20_UP_LS0001","KLHL20","protein coding gene","no",11.57,0,0,0.011,109,0,0,"0(0)","THYM","no","TE_intersect_:173637824|chr1|173637824|173638104|HERVIP10B3-int:ERV1:LTR|222|+","TE_intersect_:173670844|chr1|173670844|173671333|LTR71A:ERV1:LTR|184|-","intron_intersect_chr1:173637134|173646846","NA"]
["chr1:173640866|173671234:+","chr1:173637711|173638034:+_chr1:173640740|173640866:+_chr1:173671234|173671334:+_chr1:173702913|173715078:+_chr1:173716003|173716066:+_chr1:173733713|173734217:+","UN_KLHL20_UP_LS0003","KLHL20","protein coding gene","no",9.36,0,0,0.002,16,0,0,"0(0)","THYM","no","TE_intersect_:173638639|chr1|173638639|173642448|HERVIP10B3-int:ERV1:LTR|281|+","TE_intersect_:173670844|chr1|173670844|173671333|LTR71A:ERV1:LTR|184|-","intron_intersect_chr1:173637134|173646846","NA"]
["chr1:173659433|173670863:-","chr1:173605648|173610215:-_chr1:173624787|173624925:-_chr1:173627065|173627159:-_chr1:173646846|173647013:-_chr1:173659091|173659433:-_chr1:173670863|173670950:-","UN_SLC9C2_UP_LS0001","SLC9C2","protein coding gene","no",6.37,0,0,0.002,21,0,0,"0(0)","SARC","no","TE_intersect_:173670844|chr1|173670844|173671333|LTR71A:ERV1:LTR|184|-","NA","NA","intron_intersect_chr1:173659433|173669817"]
["chr1:173671334|173678064:+","chr1:173637711|173638034:+_chr1:173671234|173671334:+_chr1:173678064|173681207:+","UN_KLHL20_UP_LS0004","KLHL20","protein coding gene","no",7.41,0,0,0.004,39,0,0,"0(0)","THYM","no","TE_intersect_:173671333|chr1|173671333|173671588|MER50:ERV1:LTR|142|+","TE_intersect_:173677908|chr1|173677908|173678074|MER4-int:ERV1:LTR|185|-","NA","NA"]
["chr1:173671334|173702913:+","chr1:173637711|173638034:+_chr1:173671234|173671334:+_chr1:173702913|173706078:+","UN_KLHL20_UP_LS0005","KLHL20","protein coding gene","no",7.02,0,0,0.012,111,0,0,"0(0)","THYM","no","TE_intersect_:173671333|chr1|173671333|173671588|MER50:ERV1:LTR|142|+","TE_intersect_:173702717|chr1|173702717|173703021|AluJr4:Alu:SINE|184|-","NA","NA"]
["chr1:173671334|173716003:+","chr1:173637702|173638034:+_chr1:173671234|173671334:+_chr1:173716003|173716066:+_chr1:173733713|173734217:+","UN_BX248409.1_UP_LS0002","BX248409.1","pseudogene","no",5.76,0,0,0.003,27,0,0,"0(0)","THYM","no","TE_intersect_:173671333|chr1|173671333|173671588|MER50:ERV1:LTR|142|+","NA","NA","exon_intersect_chr1:173716003|173716066"]
["chr1:173676391|173691113:-","chr1:173606014|173610215:-_chr1:173624787|173624925:-_chr1:173627065|173627159:-_chr1:173646846|173647013:-_chr1:173659091|173659433:-_chr1:173676274|173676391:-_chr1:173691113|173691862:-","UN_ANKRD45_UP_LS0004","ANKRD45","protein coding gene","no",3.27,0,0,0.016,151,0,0,"0(0)","LUSC;STAD","no","TE_intersect_:173688893|chr1|173688893|173691401|HERVIP10F-int:ERV1:LTR|82|-","TE_intersect_:173675632|chr1|173675632|173676802|MER4-int:ERV1:LTR|99|-","NA","NA"]
["chr1:173826786|173830660:+","chr1:173824503|173825356:+_chr1:173826687|173826786:+_chr1:173830660|173830761:+_chr1:173831535|173831630:+_chr1:173833376|173833499:+_chr1:173834473|173834519:+_chr1:173836940|173837046:+_chr1:173838190|173838259:+_chr1:173839367|173839546:+_chr1:173845229|173845291:+_chr1:173853349|173853567:+_chr1:173853795|173853905:+_chr1:173856666|173856741:+_chr1:173857518|173857838:+","DARS2_LS003","DARS2","protein coding gene","no",1.22,0,0,0.003,26,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chr1:173826786|173828333","exon_intersect_chr1:173830660|173830761"]
["chr1:173864098|173864257:-","chr1:173864034|173864098:-_chr1:173864257|173864304:-_chr1:173864484|173864506:-_chr1:173864675|173864871:-","UN_GAS5_LS0004","GAS5","lncRNA gene","yes",71.2,0,0,0.009,87,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:173863900|173865547","exon_intersect_chr1:173863900|173865547"]
["chr1:173970617|173978488:-","chr1:173938576|173938871:-_chr1:173941265|173941380:-_chr1:173946476|173946608:-_chr1:173946746|173946836:-_chr1:173947369|173947582:-_chr1:173951986|173952138:-_chr1:173961077|173961244:-_chr1:173961725|173962095:-_chr1:173963973|173965120:-_chr1:173970505|173970617:-_chr1:173978488|173978620:-_chr1:173980809|173981009:-_chr1:173982727|173982902:-_chr1:173983418|173983657:-_chr1:173984499|174004026:-","UN_RC3H1_LS0011","RC3H1","protein coding gene","no",1.53,0,0,0.003,32,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:173978488|173978620","intron_intersect_chr1:173970617|173972509"]
["chr1:173982894|173983418:-","chr1:173938576|173938871:-_chr1:173941265|173941380:-_chr1:173943442|173946608:-_chr1:173946746|173947582:-_chr1:173951986|173952138:-_chr1:173961077|173961244:-_chr1:173961725|173962095:-_chr1:173963973|173964187:-_chr1:173964839|173965120:-_chr1:173970505|173970617:-_chr1:173972509|173972627:-_chr1:173978488|173980583:-_chr1:173980809|173981009:-_chr1:173982727|173982894:-_chr1:173983418|173983657:-_chr1:173984499|174004044:-","UN_RC3H1_LS0017","RC3H1","protein coding gene","no",2.06,0,0,0.003,33,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:173983418|173983657","exon_intersect_chr1:173982727|173983033"]
["chr1:17407186|17407223:+","chr1:17406760|17407186:+_chr1:17407223|17407382:+","UN_RCC2_LS0021","RCC2","protein coding gene","no",2.95,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:17406760|17409194","exon_intersect_chr1:17406760|17409194"]
["chr1:17407533|17407601:+","chr1:17406760|17406851:+_chr1:17407337|17407533:+_chr1:17407601|17407784:+","UN_RCC2_LS0039","RCC2","protein coding gene","no",8.83,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:17406760|17409194","exon_intersect_chr1:17406760|17409194"]
["chr1:17408146|17438347:+","chr1:17406760|17406851:+_chr1:17407337|17407529:+_chr1:17408136|17408146:+_chr1:17438347|17438514:+","UN_RCC2_LS0066","RCC2","protein coding gene","no",1.76,0,0,0.002,21,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:17406760|17409194","exon_intersect_chr1:17438230|17438561"]
["chr1:174239034|174241483:+","chr1:174238852|174239034:+_chr1:174241483|174241657:+_chr1:174242982|174243179:+_chr1:174244298|174246338:+","UN_RABGAP1L_LS0015","RABGAP1L","protein coding gene","no",1.18,0,0,0.03,287,0,0,"0(0)","BLCA;BRCA;ESCA;LUAD;LUSC;STAD;TGCT;THYM","no","TE_intersect_:174233266|chr1|174233266|174239293|L1PA2:L1:LINE|16|-","NA","intron_intersect_chr1:174231355|174241483","exon_intersect_chr1:174241483|174241657"]
["chr1:174239314|174241483:+","chr1:174238867|174239314:+_chr1:174241483|174241657:+_chr1:174242982|174243179:+_chr1:174244298|174246337:+","UN_RABGAP1L_LS0016","RABGAP1L","protein coding gene","no",0.56,0,0,0.011,109,0,0,"0(0)","ESCA;HNSC;LUSC;STAD","no","NA","NA","intron_intersect_chr1:174231355|174241483","exon_intersect_chr1:174241483|174241657"]
["chr1:174349018|174349828:-","chr1:174348406|174349018:-_chr1:174349828|174349872:-_chr1:174350202|174350671:-","UN_RABGAP1L_LS0031","RABGAP1L","protein coding gene","no",2.29,0,0,0.002,17,0,0,"0(0)","ESCA","no","TE_intersect_:174348480|chr1|174348480|174351069|SVA_F:SVA:Retroposon|96|-","TE_intersect_:174348480|chr1|174348480|174351069|SVA_F:SVA:Retroposon|96|-","intron_intersect_chr1:174348355|174365230","intron_intersect_chr1:174348355|174365230"]
["chr1:174349872|174350202:-","chr1:174348406|174349018:-_chr1:174349828|174349872:-_chr1:174350202|174350671:-","UN_RABGAP1L_LS0036","RABGAP1L","protein coding gene","no",2.64,0,0,0.002,20,0,0,"0(0)","ESCA","no","TE_intersect_:174348480|chr1|174348480|174351069|SVA_F:SVA:Retroposon|96|-","TE_intersect_:174348480|chr1|174348480|174351069|SVA_F:SVA:Retroposon|96|-","intron_intersect_chr1:174348355|174365230","intron_intersect_chr1:174348355|174365230"]
["chr1:174503385|174504251:+","chr1:174493276|174503385:+_chr1:174504251|174516816:+","UN_RABGAP1L_LS0043","RABGAP1L","protein coding gene","no",14.52,0,0,0.002,20,0,0,"0(0)","LAML","no","TE_intersect_:174503379|chr1|174503379|174503679|AluY:Alu:SINE|113|+","TE_intersect_:174503963|chr1|174503963|174504272|AluJb:Alu:SINE|181|-","intron_intersect_chr1:174449198|174544844","intron_intersect_chr1:174449198|174544844"]
["chr1:174568217|174596282:-","chr1:174568013|174568217:-_chr1:174596282|174596391:-","UN_RABGAP1L_LS0045","RABGAP1L","protein coding gene","no",3.86,0,0,0.008,79,0,0,"0(0)","ESCA","no","TE_intersect_:174590323|chr1|174590323|174596379|L1HS:L1:LINE|5|-","TE_intersect_:174567964|chr1|174567964|174568377|MSTB:ERVL-MaLR:LTR|169|-","intron_intersect_chr1:174548561|174637375","intron_intersect_chr1:174548561|174637375"]
["chr1:174568217|174602246:-","chr1:174568034|174568217:-_chr1:174602246|174602304:-","UN_RABGAP1L_LS0046","RABGAP1L","protein coding gene","no",3.46,0,0,0.003,24,0,0,"0(0)","DLBC","no","TE_intersect_:174602171|chr1|174602171|174602561|THE1A:ERVL-MaLR:LTR|100|-","TE_intersect_:174567964|chr1|174567964|174568377|MSTB:ERVL-MaLR:LTR|169|-","intron_intersect_chr1:174548561|174637375","intron_intersect_chr1:174548561|174637375"]
["chr1:175010787|175011094:+","chr1:174999471|174999689:+_chr1:175000089|175000195:+_chr1:175004614|175004833:+_chr1:175006745|175006841:+_chr1:175007098|175007197:+_chr1:175008609|175008706:+_chr1:175009923|175010787:+_chr1:175011094|175011710:+","UN_CACYBP_LS0006","CACYBP","protein coding gene","no",1.96,0,0,0.004,35,0,0,"0(0)","OV","no","NA","TE_intersect_:175010966|chr1|175010966|175011125|AluJr:Alu:SINE|157|+","exon_intersect_chr1:175009923|175011715","exon_intersect_chr1:175010789|175011096"]
["chr1:175073120|175077384:+","chr1:175072999|175073120:+_chr1:175077384|175077827:+_chr1:175079333|175079707:+_chr1:175080163|175080426:+_chr1:175083750|175083935:+_chr1:175085405|175085494:+_chr1:175093990|175094253:+_chr1:175097417|175097683:+_chr1:175098332|175098595:+_chr1:175116939|175117205:+_chr1:175118561|175118824:+_chr1:175123400|175123663:+_chr1:175126955|175127085:+_chr1:175128032|175128164:+_chr1:175128595|175128746:+_chr1:175135845|175135941:+_chr1:175136821|175136988:+_chr1:175144387|175144550:+_chr1:175146931|175148073:+","UN_TNN_LS0001","TNN","protein coding gene","no",1.12,0,0,0.005,51,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:175067935|175077384","exon_intersect_chr1:175077384|175077827"]
["chr1:175103105|175107021:-","chr1:175097683|175097884:-_chr1:175099980|175103105:-_chr1:175107021|175108338:-","UN_TNN_LS0016","TNN","protein coding gene","no",4.36,0,0,0.04,381,0,0,"0(0)","BLCA;CESC;ESCA;HNSC;LAML;LIHC;LUSC;STAD","no","TE_intersect_:175103901|chr1|175103901|175107104|HERV9NC-int:ERV1:LTR|39|-","TE_intersect_:175102866|chr1|175102866|175103475|HERV9NC-int:ERV1:LTR|44|-","intron_intersect_chr1:175098595|175116939","intron_intersect_chr1:175098595|175116939"]
["chr1:175107895|175108175:-","chr1:175100676|175103105:-_chr1:175107021|175107895:-_chr1:175108175|175108333:-","UN_TNN_LS0019","TNN","protein coding gene","no",3.69,0,0,0.006,58,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:175107104|chr1|175107104|175109022|LTR12C:ERV1:LTR|110|-","TE_intersect_:175107104|chr1|175107104|175109022|LTR12C:ERV1:LTR|110|-","intron_intersect_chr1:175098595|175116939","intron_intersect_chr1:175098595|175116939"]
["chr1:175644865|175743226:-","chr1:175643540|175644865:-_chr1:175743226|175743671:-","UN_TNR_LS0031","TNR","protein coding gene","no",6.44,0,0,0.005,47,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:175743226|175743770","intron_intersect_chr1:175556818|175656605"]
["chr1:175680666|175683334:+","chr1:175680443|175680666:+_chr1:175683334|175683501:+_chr1:175693542|175693853:+","UN_TNR_LS0034","TNR","protein coding gene","no",2.04,0,0,0.004,43,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:175656615|175743226","intron_intersect_chr1:175656615|175743226"]
["chr1:175808852|175809902:+","chr1:175792401|175792593:+_chr1:175808638|175808852:+_chr1:175809902|175813441:+","UN_LINC01657_UP_LS0003","LINC01657","lncRNA gene","no",3.2,0,0,0.002,17,0,0,"0(0)","UCS","no","TE_intersect_:175808545|chr1|175808545|175808858|MER77:ERVL:LTR|205|-","NA","NA","NA"]
["chr1:176046324|176055080:-","chr1:175944853|175945170:-_chr1:175947195|175947239:-_chr1:175986943|175987103:-_chr1:175988288|175988412:-_chr1:175989362|175989479:-_chr1:176027572|176027688:-_chr1:176043186|176043267:-_chr1:176043710|176043818:-_chr1:176046181|176046324:-_chr1:176055080|176055495:-","UN_COP1_LS0014","COP1","protein coding gene","no",5.62,0,0,0.002,15,0,0,"0(0)","PCPG","no","TE_intersect_:176054461|chr1|176054461|176055151|L2:L2:LINE|290|+","NA","intron_intersect_chr1:176046324|176081152","intron_intersect_chr1:176046324|176081152"]
["chr1:176057997|176058501:+","chr1:176057381|176057997:+_chr1:176058501|176059318:+","UN_COP1_LS0019","COP1","protein coding gene","no",1.69,0,0,0.005,48,0,0,"0(0)","TGCT","no","TE_intersect_:176057344|chr1|176057344|176058772|SVA_A:SVA:Retroposon|64|+","TE_intersect_:176057344|chr1|176057344|176058772|SVA_A:SVA:Retroposon|64|+","intron_intersect_chr1:176046324|176081152","intron_intersect_chr1:176046324|176081152"]
["chr1:176149074|176184633:-","chr1:175944831|175945170:-_chr1:175947195|175947239:-_chr1:175986943|175987103:-_chr1:175988288|175988412:-_chr1:175989362|175989479:-_chr1:176027572|176027688:-_chr1:176043186|176043267:-_chr1:176043710|176043818:-_chr1:176046181|176046324:-_chr1:176081152|176081287:-_chr1:176085776|176085890:-_chr1:176116624|176116681:-_chr1:176135010|176135086:-_chr1:176136488|176136547:-_chr1:176149006|176149074:-_chr1:176184633|176184692:-","UN_COP1_LS0035","COP1","protein coding gene","no",2.81,0,0,0.006,58,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:176184633|176184692","intron_intersect_chr1:176149074|176162869"]
["chr1:176395914|176396266:-","chr1:176395743|176395914:-_chr1:176396266|176396367:-","UN_MORF4L1P7_UP_LS0003","MORF4L1P7","pseudogene","no",1.86,0,0,0.003,26,0,0,"0(0)","ESCA","no","NA","TE_intersect_:176395487|chr1|176395487|176396251|SVA_D:SVA:Retroposon|72|-","NA","NA"]
["chr1:176396347|176396700:-","chr1:176395791|176395914:-_chr1:176396266|176396347:-_chr1:176396700|176396761:-","UN_MORF4L1P7_UP_LS0005","MORF4L1P7","pseudogene","no",1.6,0,0,0.001,13,0,0,"0(0)","ESCA","no","TE_intersect_:176396268|chr1|176396268|176397613|SVA_D:SVA:Retroposon|81|-","TE_intersect_:176396268|chr1|176396268|176397613|SVA_D:SVA:Retroposon|81|-","NA","NA"]
["chr1:176521357|176523766:-","chr1:176521148|176521357:-_chr1:176523766|176523809:-_chr1:176528873|176529281:-","UN_PAPPA2_LS0002","PAPPA2","protein coding gene","no",4.05,0,0,0.006,54,0,0,"0(0)","LIHC","no","NA","TE_intersect_:176521142|chr1|176521142|176521610|MLT1G1:ERVL-MaLR:LTR|251|+","intron_intersect_chr1:176463418|176537303","intron_intersect_chr1:176463418|176537303"]
["chr1:176539891|176548516:-","chr1:176538168|176539891:-_chr1:176548516|176548684:-_chr1:176550532|176550637:-_chr1:176552571|176552756:-","UN_PAPPA2_LS0007","PAPPA2","protein coding gene","no",3.59,0,0,0.001,12,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:176537349|176553488","intron_intersect_chr1:176537349|176553488"]
["chr1:176548684|176552571:-","chr1:176542866|176545407:-_chr1:176548516|176548684:-_chr1:176552571|176552745:-","UN_PAPPA2_LS0009","PAPPA2","protein coding gene","no",3,0,0,0.004,39,0,0,"0(0)","KICH","no","NA","TE_intersect_:176548581|chr1|176548581|176548807|MIR:MIR:SINE|243|+","intron_intersect_chr1:176537349|176553488","intron_intersect_chr1:176537349|176553488"]
["chr1:17699860|17712835:+","chr1:17699484|17699860:+_chr1:17712835|17712941:+_chr1:17717211|17717514:+_chr1:17718560|17719158:+","UN_AL136529.1_UP_LS0006","AL136529.1","lncRNA gene","no",75.37,0,0,0.003,33,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr1:17699860|17717211:+","chr1:17699465|17699860:+_chr1:17717211|17717514:+_chr1:17718560|17719162:+","UN_AL136529.1_UP_LS0007","AL136529.1","lncRNA gene","no",25.87,0,0,0.002,23,0,0,"0(0)","PCPG","no","NA","TE_intersect_:17717110|chr1|17717110|17717277|L2a:L2:LINE|304|+","NA","NA"]
["chr1:17700155|17712835:+","chr1:17699475|17700155:+_chr1:17712835|17712941:+_chr1:17717211|17717514:+_chr1:17718560|17719215:+","UN_AL136529.1_UP_LS0008","AL136529.1","lncRNA gene","no",70.41,0,0,0.001,12,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr1:177013644|177014791:-","chr1:177013312|177013644:-_chr1:177014791|177014875:-_chr1:177023404|177023571:-_chr1:177024583|177024732:-_chr1:177029634|177029741:-_chr1:177030806|177030952:-_chr1:177032456|177032573:-","UN_ASTN1_LS0015","ASTN1","protein coding gene","no",2.26,0,0,0.008,73,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:177014791|177014875","intron_intersect_chr1:176981773|177014791"]
["chr1:177032849|177048227:-","chr1:177013420|177014623:-_chr1:177014791|177014875:-_chr1:177023404|177023571:-_chr1:177024583|177024732:-_chr1:177029634|177029741:-_chr1:177030806|177030952:-_chr1:177032456|177032849:-_chr1:177048227|177048344:-","UN_ASTN1_LS0019","ASTN1","protein coding gene","no",1.85,0,0,0.002,18,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:177032849|177061078","intron_intersect_chr1:177032849|177061078"]
["chr1:17712941|17717211:+","chr1:17699484|17699860:+_chr1:17712835|17712941:+_chr1:17717211|17717514:+_chr1:17718560|17719158:+","UN_AL136529.1_UP_LS0010","AL136529.1","lncRNA gene","no",148.69,0,0,0.004,43,0,0,"0(0)","PCPG","no","NA","TE_intersect_:17717110|chr1|17717110|17717277|L2a:L2:LINE|304|+","NA","NA"]
["chr1:17717514|17718560:+","chr1:17699484|17699860:+_chr1:17712835|17712941:+_chr1:17717211|17717514:+_chr1:17718560|17719158:+","UN_ACTL8_UP_LS0001","ACTL8","protein coding gene","no",123.78,0,0,0.006,53,0,0,"0(0)","PCPG","no","NA","TE_intersect_:17718451|chr1|17718451|17718634|MIR:MIR:SINE|344|-","NA","exon_intersect_chr1:17718560|17718720"]
["chr1:177320125|177325213:+","chr1:177319659|177320125:+_chr1:177325213|177328872:+","UN_LINC01645_UP_LS0004","LINC01645","lncRNA gene","no",17.52,0,0,0.006,58,0,0,"0(0)","LAML","no","TE_intersect_:177320092|chr1|177320092|177324741|HERV9N-int:ERV1:LTR|135|+","TE_intersect_:177324897|chr1|177324897|177325446|HERV9N-int:ERV1:LTR|135|+","NA","NA"]
["chr1:177363541|177479592:+","chr1:177351586|177351650:+_chr1:177356847|177357065:+_chr1:177363439|177363541:+_chr1:177479592|177487835:+","UN_LINC01741_UP_LS0006","LINC01741","lncRNA gene","no",7.56,0,0,0.003,33,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:177363541|177366169","intron_intersect_chr1:177393788|177552870"]
["chr1:177393788|177489599:-","chr1:177392643|177393788:-_chr1:177489599|177489649:-_chr1:177573728|177573784:-_chr1:177576711|177576949:-","UN_AL122019.1_LS0007","AL122019.1","lncRNA gene","no",1.9,0,0,0.004,41,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:177393788|177552870","intron_intersect_chr1:177393788|177552870"]
["chr1:177393788|177556486:-","chr1:177389330|177393788:-_chr1:177556486|177556556:-_chr1:177573728|177573784:-_chr1:177576711|177576949:-","UN_AL122019.1_LS0009","AL122019.1","lncRNA gene","no",7.1,0,0,0.012,111,0,0,"0(0)","LGG;OV","no","TE_intersect_:177556406|chr1|177556406|177556762|MSTD:ERVL-MaLR:LTR|179|-","NA","intron_intersect_chr1:177552960|177573728","intron_intersect_chr1:177393788|177552870"]
["chr1:177556556|177573728:-","chr1:177389330|177393788:-_chr1:177556486|177556556:-_chr1:177573728|177573784:-_chr1:177576711|177576949:-","UN_AL122019.1_LS0018","AL122019.1","lncRNA gene","no",6.83,0,0,0.014,132,0,0,"0(0)","LGG;OV","no","NA","TE_intersect_:177556406|chr1|177556406|177556762|MSTD:ERVL-MaLR:LTR|179|-","exon_intersect_chr1:177573728|177573784","intron_intersect_chr1:177552960|177573728"]
["chr1:177573784|177630433:-","chr1:177389041|177393788:-_chr1:177489599|177489649:-_chr1:177556486|177556556:-_chr1:177573728|177573784:-_chr1:177630433|177630502:-_chr1:177744709|177744944:-","UN_ASTN1_UP_LS0010","ASTN1","protein coding gene","no",3.44,0,0,0.004,41,0,0,"0(0)","LGG","no","TE_intersect_:177630427|chr1|177630427|177630506|MIR3:MIR:SINE|218|+","NA","NA","intron_intersect_chr1:177573784|177576711"]
["chr1:177573784|177744709:-","chr1:177389041|177393788:-_chr1:177556486|177556556:-_chr1:177573728|177573784:-_chr1:177744709|177744944:-","UN_ASTN1_UP_LS0013","ASTN1","protein coding gene","no",3.97,0,0,0.007,68,0,0,"0(0)","LGG;OV","no","TE_intersect_:177744683|chr1|177744683|177745823|L2a:L2:LINE|284|+","NA","NA","intron_intersect_chr1:177573784|177576711"]
["chr1:17759486|17822985:+","chr1:17759341|17759486:+_chr1:17822985|17823356:+_chr1:17825767|17827061:+","UN_ACTL8_LS0005","ACTL8","protein coding gene","no",4.46,0,0,0.028,272,0,0,"0(0)","BRCA;CESC;ESCA;STAD;UCS","no","TE_intersect_:17759155|chr1|17759155|17759614|LTR41:ERVL:LTR|208|+","NA","intron_intersect_chr1:17755504|17822982","exon_intersect_chr1:17822982|17823356"]
["chr1:177710248|177744709:-","chr1:177392686|177393788:-_chr1:177573728|177573784:-_chr1:177710061|177710248:-_chr1:177744709|177745095:-","UN_AL122019.1_UP_LS0004","AL122019.1","lncRNA gene","no",1.75,0,0,0.004,39,0,0,"0(0)","LGG","no","TE_intersect_:177744683|chr1|177744683|177745823|L2a:L2:LINE|284|+","NA","NA","exon_intersect_chr1:177709789|177710330"]
["chr1:177825578|177826237:+","chr1:177824674|177825578:+_chr1:177826237|177827440:+","UN_AL359075.1_UP_LS0002","AL359075.1","pseudogene","no",5.33,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:177973304|177984956:-","chr1:177929146|177929929:-_chr1:177930545|177930643:-_chr1:177932490|177932569:-_chr1:177932698|177932806:-_chr1:177933214|177933312:-_chr1:177933484|177933636:-_chr1:177936298|177936365:-_chr1:177937214|177937513:-_chr1:177939702|177939777:-_chr1:177940610|177940714:-_chr1:177941900|177942040:-_chr1:177944561|177944666:-_chr1:177946420|177946531:-_chr1:177947825|177947942:-_chr1:177951914|177951995:-_chr1:177954279|177954376:-_chr1:177958132|177958362:-_chr1:177958840|177958975:-_chr1:177960342|177960403:-_chr1:177960791|177960942:-_chr1:177961590|177961734:-_chr1:177964171|177964279:-_chr1:177965047|177965167:-_chr1:177965893|177966005:-_chr1:177967683|177968039:-_chr1:177971396|177971467:-_chr1:177973193|177973304:-_chr1:177984956|177985062:-_chr1:177985860|177985929:-_chr1:178022440|178022587:-","UN_CRYZL2P-SEC16B_LS0008","CRYZL2P-SEC16B","lncRNA gene","no",1.64,0,0,0.002,20,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:177984956|177985062","exon_intersect_chr1:177973193|177973309"]
["chr1:178037801|178043328:-","chr1:178006151|178008149:-_chr1:178022440|178022668:-_chr1:178026155|178026255:-_chr1:178031551|178031660:-_chr1:178032430|178032495:-_chr1:178033027|178033085:-_chr1:178034705|178034801:-_chr1:178037694|178037801:-_chr1:178043328|178045886:-","UN_SEC16B_UP_LS0003","SEC16B","protein coding gene","no",1.12,0,0,0.006,53,0,0,"0(0)","STAD","no","TE_intersect_:178041156|chr1|178041156|178043398|HERVH-int:ERV1:LTR|139|+","NA","NA","intron_intersect_chr1:178037801|178037896"]
["chr1:1785728|1785904:+","chr1:1785401|1785583:+_chr1:1785700|1785728:+_chr1:1785904|1786114:+","UN_GNB1_LS0023","GNB1","protein coding gene","no",0.88,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1785285|1787053","exon_intersect_chr1:1785285|1787053"]
["chr1:1785728|1785921:+","chr1:1785690|1785728:+_chr1:1785921|1785946:+_chr1:1786188|1786587:+","UN_GNB1_LS0024","GNB1","protein coding gene","no",0.99,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:1785285|1787053","exon_intersect_chr1:1785285|1787053"]
["chr1:179743423|179770637:+","chr1:179742313|179743423:+_chr1:179770637|179770773:+_chr1:179807798|179807888:+_chr1:179813076|179813190:+_chr1:179813779|179816238:+","UN_FAM163A_LS0001","FAM163A","protein coding gene","no",0.63,0,0,0.002,23,0,0,"0(0)","THYM","no","NA","TE_intersect_:179770208|chr1|179770208|179770825|L2c:L2:LINE|290|+","intron_intersect_chr1:179743423|179807798","intron_intersect_chr1:179743423|179807798"]
["chr1:179770773|179805628:+","chr1:179741744|179743566:+_chr1:179770637|179770773:+_chr1:179805628|179805773:+_chr1:179807798|179807888:+_chr1:179812110|179812131:+_chr1:179813076|179813190:+_chr1:179813779|179816198:+","UN_FAM163A_LS0008","FAM163A","protein coding gene","no",3.19,0,0,0.005,48,0,0,"0(0)","PCPG;THYM","no","TE_intersect_:179770208|chr1|179770208|179770825|L2c:L2:LINE|290|+","NA","intron_intersect_chr1:179743423|179807798","intron_intersect_chr1:179743423|179807798"]
["chr1:179807608|179807798:+","chr1:179807435|179807608:+_chr1:179807798|179807888:+_chr1:179812110|179812131:+_chr1:179813076|179813190:+_chr1:179813779|179816198:+","UN_FAM163A_LS0014","FAM163A","protein coding gene","no",1.28,0,0,0.007,69,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr1:179743423|179807798","exon_intersect_chr1:179807798|179807888"]
["chr1:179807888|179809325:+","chr1:179743254|179743566:+_chr1:179770637|179770773:+_chr1:179807798|179807888:+_chr1:179809325|179809446:+_chr1:179812110|179812131:+_chr1:179813076|179813190:+_chr1:179813779|179816198:+","UN_FAM163A_LS0015","FAM163A","protein coding gene","no",2.58,0,0,0.003,31,0,0,"0(0)","PCPG;THYM","no","NA","NA","intron_intersect_chr1:179807888|179812110","intron_intersect_chr1:179807888|179812110"]
["chr1:179809446|179812110:+","chr1:179809423|179809446:+_chr1:179812110|179812131:+_chr1:179813076|179813190:+_chr1:179813779|179816234:+","UN_FAM163A_LS0017","FAM163A","protein coding gene","no",2.07,0,0,0.004,38,0,0,"0(0)","PCPG;THYM","no","NA","NA","intron_intersect_chr1:179807888|179812110","exon_intersect_chr1:179812110|179812131"]
["chr1:179812131|179812416:+","chr1:179742830|179743566:+_chr1:179807798|179807888:+_chr1:179812110|179812131:+_chr1:179812416|179813190:+_chr1:179813779|179816198:+","UN_FAM163A_LS0019","FAM163A","protein coding gene","no",1.56,0.05,0,0.004,41,0.001,1,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:179812131|179813076","intron_intersect_chr1:179812131|179813076"]
["chr1:179812131|179812776:+","chr1:179743532|179743566:+_chr1:179807798|179807888:+_chr1:179812110|179812131:+_chr1:179812776|179813190:+_chr1:179813779|179816198:+","UN_FAM163A_LS0020","FAM163A","protein coding gene","no",2.05,0,0,0.012,114,0,0,"0(0)","PCPG;THYM","no","NA","NA","intron_intersect_chr1:179812131|179813076","intron_intersect_chr1:179812131|179813076"]
["chr1:179815782|179815826:+","chr1:179743163|179743423:+_chr1:179807798|179807888:+_chr1:179812110|179812131:+_chr1:179813076|179813190:+_chr1:179813779|179815782:+_chr1:179815826|179817055:+","UN_FAM163A_LS0026","FAM163A","protein coding gene","no",18.04,0.54,0,0.006,62,0.001,1,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:179813779|179816198","exon_intersect_chr1:179813779|179816198"]
["chr1:179836403|179846107:-","chr1:179829773|179829831:-_chr1:179835799|179836403:-_chr1:179846107|179846828:-_chr1:179847535|179847636:-_chr1:179850845|179851363:-_chr1:179852632|179852811:-_chr1:179856058|179856170:-_chr1:179865436|179865854:-_chr1:179877239|179877373:-_chr1:179877693|179877772:-","UN_AL359853.2_UP_LS0002","AL359853.2","lncRNA gene","no",2.09,0,0,0.005,47,0,0,"0(0)","STAD","no","NA","TE_intersect_:179836072|chr1|179836072|179837495|LTR12C:ERV1:LTR|66|-","exon_intersect_chr1:179839967|179846828","NA"]
["chr1:179955418|179986169:+","chr1:179954482|179955418:+_chr1:179986169|179986254:+_chr1:179987243|179987286:+_chr1:179990507|179990621:+_chr1:179992062|179992221:+_chr1:179996553|179997175:+_chr1:180003174|180003287:+_chr1:180006454|180006567:+_chr1:180011929|180012075:+_chr1:180013847|180014505:+_chr1:180015849|180015970:+_chr1:180019949|180021009:+_chr1:180022698|180022848:+_chr1:180024419|180024582:+_chr1:180031320|180031494:+_chr1:180033862|180034082:+_chr1:180036926|180037089:+_chr1:180041138|180041248:+_chr1:180041662|180041802:+_chr1:180043056|180043192:+_chr1:180044051|180044173:+_chr1:180048536|180048705:+_chr1:180052970|180053166:+_chr1:180053750|180053934:+_chr1:180054415|180054502:+_chr1:180062220|180062366:+_chr1:180065115|180065272:+_chr1:180075022|180075221:+_chr1:180078463|180078674:+_chr1:180080517|180080661:+_chr1:180084018|180084178:+_chr1:180087578|180087717:+_chr1:180090714|180090796:+_chr1:180092614|180094616:+_chr1:180095523|180095930:+_chr1:180096038|180096184:+_chr1:180098863|180098985:+_chr1:180110997|180114875:+","UN_CEP350_LS0001","CEP350","protein coding gene","no",0.69,0,0,0.004,37,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:179955142|179968686","exon_intersect_chr1:179986169|179986254"]
["chr1:180103286|180110997:+","chr1:180103211|180103286:+_chr1:180110997|180114875:+","UN_CEP350_LS0061","CEP350","protein coding gene","no",6.77,0.05,0,0.005,51,0.001,1,"0(0)","DLBC","no","TE_intersect_:180102858|chr1|180102858|180103492|LTR9:ERV1:LTR|166|-","NA","intron_intersect_chr1:180098985|180110997","exon_intersect_chr1:180110997|180114880"]
["chr1:180183286|180183916:+","chr1:180154897|180155172:+_chr1:180166491|180166591:+_chr1:180175321|180175366:+_chr1:180175931|180176033:+_chr1:180178794|180178884:+_chr1:180182174|180183286:+_chr1:180183916|180184050:+_chr1:180186053|180186182:+_chr1:180189552|180189674:+_chr1:180190433|180190580:+_chr1:180194213|180194392:+_chr1:180196262|180196599:+_chr1:180197333|180198016:+","UN_QSOX1_LS0051","QSOX1","protein coding gene","no",6.91,0,0,0.004,37,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:180182319|180183916","exon_intersect_chr1:180183916|180184050"]
["chr1:180196794|180196855:+","chr1:180196682|180196794:+_chr1:180196855|180204030:+","UN_QSOX1_LS0149","QSOX1","protein coding gene","no",31.21,0,0,0.005,50,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:180196262|180204030","exon_intersect_chr1:180196262|180204030"]
["chr1:180199716|180199768:-","chr1:180199453|180199716:-_chr1:180199768|180199917:-","UN_QSOX1_LS0309","QSOX1","protein coding gene","no",4.91,0,0,0.008,73,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:180196262|180204030","exon_intersect_chr1:180196262|180204030"]
["chr1:180542425|180543271:-","chr1:180541914|180542425:-_chr1:180543271|180543291:-","UN_RF00019_UP_LS0063","RF00019","small non-coding RNA gene","no",1.12,0,0,0.002,20,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:180563893|180566172:-","chr1:180563457|180563893:-_chr1:180566172|180566236:-","UN_OVAAL_LS0002","OVAAL","lncRNA gene","no",4.38,0,0,0.021,199,0,0,"0(0)","OV;UCEC","no","NA","TE_intersect_:180563373|chr1|180563373|180564027|MER50:ERV1:LTR|149|-","exon_intersect_chr1:180565251|180566518","intron_intersect_chr1:180562344|180565251"]
["chr1:180872583|180873803:+","chr1:180871942|180872583:+_chr1:180873803|180873942:+_chr1:180880076|180880297:+_chr1:180884006|180890251:+","UN_XPR1_LS0041","XPR1","protein coding gene","no",1.22,0,0,0.008,79,0,0,"0(0)","ESCA;LUSC;THYM","no","TE_intersect_:180866811|chr1|180866811|180872843|L1HS:L1:LINE|5|-","NA","intron_intersect_chr1:180863874|180873803","exon_intersect_chr1:180873803|180874055"]
["chr1:180884618|180884842:-","chr1:180884463|180884618:-_chr1:180884842|180884965:-","UN_XPR1_LS0056","XPR1","protein coding gene","no",0.84,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:180884006|180890251","exon_intersect_chr1:180884006|180890251"]
["chr1:180900037|180906538:+","chr1:180632015|180632270:+_chr1:180682360|180682411:+_chr1:180787753|180787854:+_chr1:180803388|180803611:+_chr1:180806062|180806211:+_chr1:180806474|180806557:+_chr1:180811407|180811488:+_chr1:180824753|180824943:+_chr1:180825165|180825344:+_chr1:180834874|180835045:+_chr1:180836522|180836716:+_chr1:180863708|180863874:+_chr1:180873803|180873942:+_chr1:180880076|180880297:+_chr1:180884006|180895139:+_chr1:180898952|180900037:+_chr1:180906538|180906730:+_chr1:180908203|180908291:+_chr1:180908692|180908771:+_chr1:180908873|180909246:+","UN_AL162431.1_UP_LS0006","AL162431.1","lncRNA gene","no",2.39,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:180950918|180951350:-","chr1:180949699|180950918:-_chr1:180951350|180951374:-","UN_KIAA1614_LS0023","KIAA1614","protein coding gene","no",1.64,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr1:180945303|180951614","exon_intersect_chr1:180945303|180951614"]
["chr1:181127321|181129607:+","chr1:181107031|181107054:+_chr1:181127196|181127321:+_chr1:181129607|181129718:+","UN_LINC01732_UP_LS0001","LINC01732","lncRNA gene","no",3.68,0,0,0.005,52,0,0,"0(0)","LIHC","no","TE_intersect_:181127262|chr1|181127262|181127459|MIRb:MIR:SINE|310|-","NA","NA","NA"]
["chr1:181129275|181129607:+","chr1:181129036|181129275:+_chr1:181129607|181129673:+","UN_LINC01732_UP_LS0002","LINC01732","lncRNA gene","no",2.64,0,0,0.002,15,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr1:181318123|181413133:+","chr1:181317674|181318123:+_chr1:181413133|181413580:+_chr1:181483744|181484010:+_chr1:181510477|181510582:+_chr1:181511371|181511510:+_chr1:181577766|181577869:+_chr1:181579072|181579224:+_chr1:181580595|181580776:+_chr1:181651338|181651441:+_chr1:181710954|181711069:+_chr1:181715338|181715391:+_chr1:181716040|181716129:+_chr1:181717093|181717302:+_chr1:181718055|181718167:+_chr1:181719751|181719863:+_chr1:181720206|181720337:+_chr1:181720783|181720855:+_chr1:181721758|181721875:+_chr1:181724470|181724537:+_chr1:181726065|181726162:+_chr1:181732384|181733034:+_chr1:181733437|181733750:+_chr1:181736275|181736434:+_chr1:181737525|181737654:+_chr1:181738367|181738426:+_chr1:181739147|181739253:+_chr1:181752143|181752239:+_chr1:181755237|181755397:+_chr1:181755956|181756093:+_chr1:181756925|181757126:+_chr1:181757947|181758111:+_chr1:181758758|181758868:+_chr1:181762574|181762657:+_chr1:181763406|181763531:+_chr1:181766546|181766611:+_chr1:181771293|181771384:+_chr1:181772066|181772231:+_chr1:181776101|181777289:+","CACNA1E_LS001","CACNA1E","protein coding gene","no",3.5,0,0,0.004,34,0,0,"0(0)","OV","yes","NA","NA","NA","exon_intersect_chr1:181413102|181413580"]
["chr1:181651441|181655535:+","chr1:181482585|181484010:+_chr1:181510477|181510582:+_chr1:181511371|181511510:+_chr1:181577766|181577869:+_chr1:181579072|181579224:+_chr1:181580595|181580776:+_chr1:181651338|181651441:+_chr1:181655535|181656058:+","UN_CACNA1E_LS0023","CACNA1E","protein coding gene","no",3.29,0,0,0.006,61,0,0,"0(0)","DLBC","no","NA","TE_intersect_:181655258|chr1|181655258|181655867|HAL1:L1:LINE|282|+","exon_intersect_chr1:181651338|181652094","intron_intersect_chr1:181652094|181668749"]
["chr1:181715075|181715338:+","chr1:181714772|181715075:+_chr1:181715338|181715391:+_chr1:181716040|181716129:+_chr1:181717093|181717302:+_chr1:181718055|181718167:+_chr1:181719751|181719863:+_chr1:181720206|181720337:+_chr1:181720783|181720855:+_chr1:181721758|181721875:+_chr1:181724470|181724537:+_chr1:181726065|181726162:+_chr1:181732384|181733034:+_chr1:181733437|181733750:+_chr1:181736275|181736434:+_chr1:181737525|181737654:+_chr1:181738367|181738426:+_chr1:181739147|181739253:+_chr1:181752143|181752239:+_chr1:181755237|181755397:+_chr1:181755956|181756093:+_chr1:181756925|181757126:+_chr1:181757947|181758111:+_chr1:181758758|181758868:+_chr1:181762574|181762657:+_chr1:181763406|181763531:+_chr1:181766546|181766611:+_chr1:181771293|181771384:+_chr1:181772066|181772231:+_chr1:181776101|181776228:+_chr1:181778953|181779162:+_chr1:181781427|181781523:+_chr1:181783679|181783784:+_chr1:181784661|181784768:+_chr1:181785318|181785418:+_chr1:181785713|181785819:+_chr1:181790445|181790556:+_chr1:181793665|181793793:+_chr1:181794864|181795044:+_chr1:181796668|181796858:+_chr1:181798292|181801580:+","UN_CACNA1E_LS0024","CACNA1E","protein coding gene","no",1.96,0,0,0.002,23,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:181711069|181715338","exon_intersect_chr1:181715338|181715391"]
["chr1:181763531|181771293:+","chr1:181721812|181721875:+_chr1:181724470|181724537:+_chr1:181726065|181726162:+_chr1:181732384|181733034:+_chr1:181733437|181733750:+_chr1:181736275|181736434:+_chr1:181737525|181737654:+_chr1:181738367|181738426:+_chr1:181739147|181739253:+_chr1:181752143|181752239:+_chr1:181755237|181755397:+_chr1:181755956|181756093:+_chr1:181756925|181757126:+_chr1:181757947|181758111:+_chr1:181758758|181758868:+_chr1:181762574|181762657:+_chr1:181763406|181763531:+_chr1:181771293|181771384:+_chr1:181772066|181772231:+_chr1:181776101|181776228:+_chr1:181781427|181781523:+_chr1:181783679|181783784:+_chr1:181784661|181784768:+_chr1:181785318|181785418:+_chr1:181785713|181785819:+_chr1:181790445|181790556:+_chr1:181793665|181793793:+_chr1:181794864|181795044:+_chr1:181796668|181796858:+_chr1:181798292|181806741:+","UN_CACNA1E_LS0028","CACNA1E","protein coding gene","no",3.52,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:181763531|181766546","exon_intersect_chr1:181771293|181771384"]
["chr1:181776228|181779443:+","chr1:181483745|181484010:+_chr1:181510477|181510582:+_chr1:181511371|181511510:+_chr1:181577766|181577869:+_chr1:181579072|181579224:+_chr1:181580595|181580776:+_chr1:181651338|181651441:+_chr1:181710954|181711069:+_chr1:181715338|181715391:+_chr1:181716040|181716129:+_chr1:181717093|181717302:+_chr1:181718055|181718167:+_chr1:181719751|181719863:+_chr1:181720206|181720337:+_chr1:181720783|181720855:+_chr1:181721758|181721875:+_chr1:181724470|181724537:+_chr1:181726065|181726162:+_chr1:181732384|181733034:+_chr1:181733437|181733750:+_chr1:181736275|181736434:+_chr1:181737525|181737654:+_chr1:181738367|181738426:+_chr1:181739147|181739253:+_chr1:181750476|181750487:+_chr1:181752143|181752239:+_chr1:181755237|181755397:+_chr1:181755956|181756093:+_chr1:181756925|181757126:+_chr1:181757947|181758111:+_chr1:181758758|181758868:+_chr1:181762574|181762657:+_chr1:181763406|181763531:+_chr1:181766546|181766611:+_chr1:181771293|181771384:+_chr1:181772066|181772231:+_chr1:181776101|181776228:+_chr1:181779443|181779539:+_chr1:181783679|181783784:+_chr1:181784661|181784768:+_chr1:181785318|181785418:+_chr1:181785713|181785819:+_chr1:181790445|181790556:+_chr1:181793665|181793793:+_chr1:181794864|181795044:+_chr1:181796668|181796858:+_chr1:181798292|181808084:+","CACNA1E_LS041","CACNA1E","protein coding gene","no",3.21,0,0,0.009,82,0,0,"0(0)","OV","yes","NA","NA","intron_intersect_chr1:181776228|181781427","intron_intersect_chr1:181776228|181781427"]
["chr1:181779539|181783679:+","chr1:181779261|181779539:+_chr1:181783679|181783784:+_chr1:181784661|181784768:+_chr1:181785318|181785418:+_chr1:181785713|181785819:+_chr1:181790445|181790556:+_chr1:181793665|181793793:+_chr1:181794864|181795044:+_chr1:181796668|181796858:+_chr1:181798292|181801580:+","CACNA1E_LS043","CACNA1E","protein coding gene","no",4.88,0,0,0.009,86,0,0,"0(0)","OV","yes","NA","NA","intron_intersect_chr1:181776228|181781427","exon_intersect_chr1:181783679|181783784"]
["chr1:182057005|182086550:+","chr1:182056839|182057005:+_chr1:182086550|182086741:+_chr1:182089365|182090289:+","UN_AL355482.2_UP_LS0003","AL355482.2","lncRNA gene","no",1.3,0,0,0.006,60,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:182054570|182058073","NA"]
["chr1:182057005|182089365:+","chr1:182056975|182057005:+_chr1:182089365|182090150:+","UN_RNU6-152P_UP_LS0002","RNU6-152P","small non-coding RNA gene","no",1.4,0,0,0.007,71,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:182054570|182058073","exon_intersect_chr1:182089365|182090112"]
["chr1:182086741|182089365:+","chr1:182022163|182022288:+_chr1:182086550|182086741:+_chr1:182089365|182090156:+","UN_AL355482.2_LS0001","AL355482.2","lncRNA gene","no",2.52,0,0,0.015,146,0,0,"0(0)","CESC;CHOL;OV","no","NA","NA","intron_intersect_chr1:182086741|182088271","exon_intersect_chr1:182089365|182090112"]
["chr1:182110210|182115251:+","chr1:182110081|182110210:+_chr1:182115251|182115352:+_chr1:182117511|182117850:+","UN_RNU6-152P_UP_LS0006","RNU6-152P","small non-coding RNA gene","no",2.48,0,0,0.004,36,0,0,"0(0)","THYM","no","TE_intersect_:182109928|chr1|182109928|182110335|MLT1G1:ERVL-MaLR:LTR|308|+","NA","NA","NA"]
["chr1:182115352|182117511:+","chr1:182110081|182110210:+_chr1:182115251|182115352:+_chr1:182117511|182117850:+","UN_RNU6-152P_UP_LS0008","RNU6-152P","small non-coding RNA gene","no",2.23,0,0,0.006,57,0,0,"0(0)","OV;THYM","no","NA","NA","NA","NA"]
["chr1:182245299|182247847:-","chr1:182037900|182058073:-_chr1:182062088|182064901:-_chr1:182068317|182068370:-_chr1:182069070|182069638:-_chr1:182078715|182078859:-_chr1:182167086|182167224:-_chr1:182203885|182204105:-_chr1:182245173|182245299:-_chr1:182247847|182247946:-_chr1:182258010|182258082:-_chr1:182292372|182292474:-","UN_LINC01344_LS0010","LINC01344","lncRNA gene","no",1.95,0,0,0.004,34,0,0,"0(0)","LIHC","no","TE_intersect_:182247825|chr1|182247825|182248139|AluJr:Alu:SINE|134|+","TE_intersect_:182245015|chr1|182245015|182245328|AluJb:Alu:SINE|201|+","intron_intersect_chr1:182244399|182313490","intron_intersect_chr1:182244399|182313490"]
["chr1:182247946|182258010:-","chr1:182037900|182058073:-_chr1:182062088|182064901:-_chr1:182068317|182068370:-_chr1:182069070|182069638:-_chr1:182078715|182078859:-_chr1:182167086|182167224:-_chr1:182203885|182204105:-_chr1:182245173|182245299:-_chr1:182247847|182247946:-_chr1:182258010|182258082:-_chr1:182292372|182292474:-","UN_LINC01344_LS0013","LINC01344","lncRNA gene","no",1.34,0,0,0.003,26,0,0,"0(0)","LIHC","no","NA","TE_intersect_:182247825|chr1|182247825|182248139|AluJr:Alu:SINE|134|+","intron_intersect_chr1:182244399|182313490","intron_intersect_chr1:182244399|182313490"]
["chr1:182313785|182317412:-","chr1:182203945|182204105:-_chr1:182313490|182313785:-_chr1:182317412|182317636:-","UN_YPEL5P1_UP_LS0001","YPEL5P1","pseudogene","no",2.13,0,0,0.01,99,0,0,"0(0)","BRCA","no","NA","NA","NA","intron_intersect_chr1:182313785|182313948"]
["chr1:182384112|182386384:+","chr1:182383919|182384112:+_chr1:182386384|182386404:+","UN_GLUL_LS0033","GLUL","protein coding gene","no",1.98,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:182381704|182387292","exon_intersect_chr1:182381704|182387292"]
["chr1:182432689|182437236:+","chr1:182421706|182422310:+_chr1:182432317|182432689:+_chr1:182437236|182437327:+_chr1:182453958|182454040:+_chr1:182458319|182458393:+_chr1:182460004|182460133:+_chr1:182471282|182471386:+_chr1:182472396|182472557:+_chr1:182473575|182476675:+","UN_RGSL1_LS0008","RGSL1","protein coding gene","no",2.73,0,0,0.004,40,0,0,"0(0)","LIHC","no","NA","NA","NA","NA"]
["chr1:182437327|182453958:+","chr1:182421706|182422310:+_chr1:182432317|182432689:+_chr1:182437236|182437327:+_chr1:182453958|182454040:+_chr1:182458319|182458393:+_chr1:182460004|182460133:+_chr1:182471282|182471386:+_chr1:182472396|182472557:+_chr1:182473575|182476675:+","UN_RGSL1_LS0011","RGSL1","protein coding gene","no",4.56,0,0,0.003,29,0,0,"0(0)","LIHC","no","TE_intersect_:182437300|chr1|182437300|182437398|MER106B:hAT-Charlie:DNA|255|+","NA","NA","exon_intersect_chr1:182453958|182454040"]
["chr1:182437330|182453958:+","chr1:182405826|182405946:+_chr1:182437236|182437330:+_chr1:182453958|182454040:+_chr1:182458319|182458393:+_chr1:182460004|182460133:+_chr1:182471282|182471386:+_chr1:182472396|182472557:+_chr1:182473575|182476686:+","UN_RGSL1_LS0013","RGSL1","protein coding gene","no",5.43,0,0,0.004,38,0,0,"0(0)","LIHC","no","TE_intersect_:182437300|chr1|182437300|182437398|MER106B:hAT-Charlie:DNA|255|+","NA","NA","exon_intersect_chr1:182453958|182454040"]
["chr1:182509283|182509636:-","chr1:182507333|182509283:-_chr1:182509636|182510633:-","UN_RGSL1_LS0021","RGSL1","protein coding gene","no",1.43,0,0,0.002,22,0,0,"0(0)","ESCA","no","TE_intersect_:182508682|chr1|182508682|182510657|SVA_F:SVA:Retroposon|70|-","TE_intersect_:182508682|chr1|182508682|182510657|SVA_F:SVA:Retroposon|70|-","intron_intersect_chr1:182507266|182522004","intron_intersect_chr1:182507266|182522004"]
["chr1:182739249|182739788:-","chr1:182737356|182739249:-_chr1:182739788|182739862:-_chr1:182741848|182742752:-","UN_RGS8_UP_LS0002","RGS8","protein coding gene","no",1.77,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:182739862|182741848:-","chr1:182724506|182725816:-_chr1:182739788|182739862:-_chr1:182741848|182743261:-","UN_RGS8_UP_LS0003","RGS8","protein coding gene","no",2.28,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:182740573|chr1|182740573|182742785|SVA_D:SVA:Retroposon|71|-","NA","NA","NA"]
["chr1:182741151|182741848:-","chr1:182740947|182741151:-_chr1:182741848|182742568:-","UN_RGS8_UP_LS0005","RGS8","protein coding gene","no",0.9,0,0,0.003,27,0,0,"0(0)","ESCA","no","TE_intersect_:182740573|chr1|182740573|182742785|SVA_D:SVA:Retroposon|71|-","TE_intersect_:182740573|chr1|182740573|182742785|SVA_D:SVA:Retroposon|71|-","NA","NA"]
["chr1:182755501|182756901:-","chr1:182755050|182755501:-_chr1:182756901|182757010:-_chr1:182758776|182758860:-_chr1:182760337|182760517:-","UN_RGS8_UP_LS0015","RGS8","protein coding gene","no",4.39,0,0,0.003,27,0,0,"0(0)","ACC;KICH","no","TE_intersect_:182756745|chr1|182756745|182757048|AluJb:Alu:SINE|155|+","TE_intersect_:182755382|chr1|182755382|182755614|MIR:MIR:SINE|260|+","NA","NA"]
["chr1:182758860|182760337:-","chr1:182755050|182755501:-_chr1:182756901|182757010:-_chr1:182758776|182758860:-_chr1:182760337|182760517:-","UN_RGS8_UP_LS0020","RGS8","protein coding gene","no",5.47,0,0,0.001,12,0,0,"0(0)","ACC","no","NA","TE_intersect_:182758721|chr1|182758721|182758996|Charlie4a:hAT-Charlie:DNA|196|+","NA","NA"]
["chr1:182947641|182951318:-","chr1:182944402|182947641:-_chr1:182951318|182951467:-_chr1:182951937|182951989:-_chr1:182952729|182953111:-","UN_SHCBP1L_LS0004","SHCBP1L","protein coding gene","no",2.21,0,0,0.005,45,0,0,"0(0)","CESC","no","NA","TE_intersect_:182947513|chr1|182947513|182947736|Tigger2a:TcMar-Tigger:DNA|160|+","exon_intersect_chr1:182951318|182951467","intron_intersect_chr1:182944490|182950523"]
["chr1:182973124|182978314:+","chr1:182973040|182973124:+_chr1:182978314|182978360:+_chr1:182986851|182986878:+_chr1:182991923|182993523:+","UN_LAMC1_UP_LS0002","LAMC1","protein coding gene","no",1.52,0,0,0.003,25,0,0,"0(0)","TGCT","no","NA","TE_intersect_:182977302|chr1|182977302|182978519|Tigger3b:TcMar-Tigger:DNA|122|-","NA","NA"]
["chr1:182973124|182986851:+","chr1:182972995|182973124:+_chr1:182986851|182986878:+_chr1:182991845|182993523:+","UN_LAMC1_UP_LS0003","LAMC1","protein coding gene","no",2.63,0,0,0.004,36,0,0,"0(0)","TGCT","no","NA","TE_intersect_:182986696|chr1|182986696|182987222|L1MEg:L1:LINE|269|-","NA","NA"]
["chr1:182978360|182986851:+","chr1:182973040|182973124:+_chr1:182978314|182978360:+_chr1:182986851|182986878:+_chr1:182991923|182993523:+","UN_LAMC1_UP_LS0005","LAMC1","protein coding gene","no",1.82,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:182977302|chr1|182977302|182978519|Tigger3b:TcMar-Tigger:DNA|122|-","TE_intersect_:182986696|chr1|182986696|182987222|L1MEg:L1:LINE|269|-","NA","NA"]
["chr1:182986878|182991845:+","chr1:182972995|182973124:+_chr1:182986851|182986878:+_chr1:182991845|182993523:+","UN_LAMC1_UP_LS0006","LAMC1","protein coding gene","no",3.27,0,0,0.004,35,0,0,"0(0)","TGCT","no","TE_intersect_:182986696|chr1|182986696|182987222|L1MEg:L1:LINE|269|-","NA","NA","NA"]
["chr1:182986878|182991923:+","chr1:182973040|182973124:+_chr1:182978314|182978360:+_chr1:182986851|182986878:+_chr1:182991923|182993523:+","UN_LAMC1_UP_LS0007","LAMC1","protein coding gene","no",4.43,0,0,0.003,25,0,0,"0(0)","TGCT","no","TE_intersect_:182986696|chr1|182986696|182987222|L1MEg:L1:LINE|269|-","TE_intersect_:182991868|chr1|182991868|182991957|L2:L2:LINE|315|+","NA","NA"]
["chr1:183136492|183136547:+","chr1:183134690|183134809:+_chr1:183135042|183135156:+_chr1:183136386|183136492:+_chr1:183136547|183136585:+_chr1:183137669|183137827:+_chr1:183140404|183140503:+_chr1:183142534|183145592:+","UN_LAMC1_LS0030","LAMC1","protein coding gene","no",59.98,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:183136386|183136585","exon_intersect_chr1:183136386|183136585"]
["chr1:183220961|183222161:+","chr1:183218926|183220961:+_chr1:183222161|183222211:+_chr1:183223135|183223324:+_chr1:183225608|183225720:+_chr1:183226698|183226916:+_chr1:183227515|183227697:+_chr1:183228374|183228619:+_chr1:183230961|183231103:+_chr1:183232187|183232343:+_chr1:183232652|183232857:+_chr1:183234367|183234446:+_chr1:183235575|183235730:+_chr1:183236460|183236604:+_chr1:183237352|183237504:+_chr1:183238307|183238421:+_chr1:183239364|183239563:+_chr1:183240040|183240198:+_chr1:183240302|183240391:+_chr1:183243147|183244964:+","UN_LAMC2_LS0004","LAMC2","protein coding gene","no",5.06,0,0,0.003,24,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:183220961|183222089","exon_intersect_chr1:183222089|183222211"]
["chr1:183235376|183235575:+","chr1:183234755|183235376:+_chr1:183235575|183235730:+_chr1:183236460|183236604:+_chr1:183237352|183237504:+_chr1:183238307|183238421:+_chr1:183239364|183239563:+_chr1:183240040|183240198:+_chr1:183240292|183240379:+","UN_LAMC2_LS0020","LAMC2","protein coding gene","no",1.64,0,0,0.007,69,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:183234446|183235575","exon_intersect_chr1:183235575|183235730"]
["chr1:183243994|183244059:-","chr1:183243840|183243994:-_chr1:183244059|183244184:-","UN_LAMC2_LS0056","LAMC2","protein coding gene","no",6.99,0,0,0.004,34,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:183243147|183244900","exon_intersect_chr1:183243147|183244900"]
["chr1:183244211|183258109:+","chr1:183186288|183186431:+_chr1:183207881|183208069:+_chr1:183215453|183215588:+_chr1:183218390|183218488:+_chr1:183220825|183220961:+_chr1:183222089|183222211:+_chr1:183223135|183223324:+_chr1:183225608|183225720:+_chr1:183226698|183226916:+_chr1:183227515|183227697:+_chr1:183228374|183228619:+_chr1:183230961|183231103:+_chr1:183232187|183232343:+_chr1:183232652|183232857:+_chr1:183234367|183234446:+_chr1:183235575|183235730:+_chr1:183236460|183236604:+_chr1:183237352|183237504:+_chr1:183238307|183238421:+_chr1:183239364|183239563:+_chr1:183240040|183240198:+_chr1:183240292|183240391:+_chr1:183243147|183244211:+_chr1:183258109|183258135:+_chr1:183258722|183258969:+","UN_AL356981.1_UP_LS0009","AL356981.1","pseudogene","no",52.26,0,0,0.006,55,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:183243147|183244900","intron_intersect_chr1:183252743|183261002"]
["chr1:183278629|183278729:-","chr1:183247248|183252743:-_chr1:183261002|183261069:-_chr1:183261202|183261303:-_chr1:183278553|183278629:-_chr1:183278729|183279075:-","UN_NMNAT2_LS0008","NMNAT2","protein coding gene","no",1.26,0,0,0.01,100,0,0,"0(0)","MESO;OV;UCS","no","NA","NA","intron_intersect_chr1:183278685|183282866","exon_intersect_chr1:183278553|183278685"]
["chr1:183278629|183279117:-","chr1:183252424|183252743:-_chr1:183261002|183261069:-_chr1:183261202|183261303:-_chr1:183278553|183278629:-_chr1:183279117|183279267:-","UN_NMNAT2_LS0011","NMNAT2","protein coding gene","no",1.12,0,0,0.007,71,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:183278685|183282866","exon_intersect_chr1:183278553|183278685"]
["chr1:183449563|183457451:+","chr1:183449408|183449563:+_chr1:183457451|183457530:+_chr1:183462043|183462857:+","UN_SMG7_UP_LS0003","SMG7","protein coding gene","no",7.11,0,0,0.004,39,0,0,"0(0)","TGCT","no","TE_intersect_:183449284|chr1|183449284|183449643|THE1B:ERVL-MaLR:LTR|145|+","NA","NA","NA"]
["chr1:183457530|183462043:+","chr1:183449408|183449563:+_chr1:183457451|183457530:+_chr1:183462043|183462857:+","UN_SMG7_UP_LS0004","SMG7","protein coding gene","no",4.87,0,0,0.006,54,0,0,"0(0)","TGCT","no","NA","TE_intersect_:183462016|chr1|183462016|183462183|AluSx:Alu:SINE|126|-","NA","intron_intersect_chr1:183461961|183469674"]
["chr1:183470842|183472645:-","chr1:183469989|183470540:-_chr1:183470720|183470842:-_chr1:183472645|183472889:-","UN_NMNAT2_UP_LS0001","NMNAT2","protein coding gene","no",0.98,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:183472216|183472649","exon_intersect_chr1:183470020|183472265"]
["chr1:183567345|183567605:-","chr1:183555594|183556230:-_chr1:183560096|183560273:-_chr1:183563195|183563306:-_chr1:183563434|183563585:-_chr1:183564005|183564030:-_chr1:183565704|183565779:-_chr1:183566920|183566988:-_chr1:183567204|183567345:-_chr1:183567605|183567717:-","UN_SMG7_LS0075","SMG7","protein coding gene","no",2.11,0,0,0.003,29,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:183567345|183569142","intron_intersect_chr1:183567345|183569142"]
["chr1:183616179|183618932:+","chr1:183613313|183613789:+_chr1:183616001|183616179:+_chr1:183618932|183619309:+","UN_RGL1_UP_LS0010","RGL1","protein coding gene","no",9.92,0,0,0.019,185,0,0,"0(0)","COAD;ESCA;HNSC;READ;STAD","no","TE_intersect_:183613648|chr1|183613648|183617077|HERVH-int:ERV1:LTR|102|+","TE_intersect_:183618563|chr1|183618563|183618941|HERVH-int:ERV1:LTR|62|+","NA","NA"]
["chr1:183616179|183618935:+","chr1:183613311|183613789:+_chr1:183616001|183616179:+_chr1:183618935|183619335:+","UN_RGL1_UP_LS0011","RGL1","protein coding gene","no",6.62,0,0,0.01,92,0,0,"0(0)","ESCA","no","TE_intersect_:183613648|chr1|183613648|183617077|HERVH-int:ERV1:LTR|102|+","TE_intersect_:183618563|chr1|183618563|183618941|HERVH-int:ERV1:LTR|62|+","NA","NA"]
["chr1:183616198|183618932:+","chr1:183613147|183613789:+_chr1:183616001|183616198:+_chr1:183618932|183619330:+","UN_RGL1_UP_LS0014","RGL1","protein coding gene","no",9.61,0,0,0.023,216,0,0,"0(0)","COAD;ESCA;HNSC;READ;STAD","no","TE_intersect_:183613648|chr1|183613648|183617077|HERVH-int:ERV1:LTR|102|+","TE_intersect_:183618563|chr1|183618563|183618941|HERVH-int:ERV1:LTR|62|+","NA","NA"]
["chr1:183616198|183618935:+","chr1:183613215|183613789:+_chr1:183616001|183616198:+_chr1:183618935|183619332:+","UN_RGL1_UP_LS0015","RGL1","protein coding gene","no",10.3,0,0,0.01,94,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:183613648|chr1|183613648|183617077|HERVH-int:ERV1:LTR|102|+","TE_intersect_:183618563|chr1|183618563|183618941|HERVH-int:ERV1:LTR|62|+","NA","NA"]
["chr1:1839238|1890364:-","chr1:1785285|1787053:-_chr1:1787322|1787437:-_chr1:1789053|1789269:-_chr1:1790395|1790596:-_chr1:1793245|1793311:-_chr1:1804419|1804581:-_chr1:1806475|1806538:-_chr1:1815756|1815862:-_chr1:1817837|1817875:-_chr1:1825397|1825499:-_chr1:1839190|1839238:-_chr1:1890364|1890422:-","GNB1_LS028","GNB1","protein coding gene","no",5.51,0,0,0.015,139,0,0,"0(0)","DLBC","yes","NA","NA","exon_intersect_chr1:1890364|1890401","intron_intersect_chr1:1839238|1839629"]
["chr1:184665601|184673360:+","chr1:184662729|184664428:+_chr1:184665269|184665601:+_chr1:184673360|184673674:+","UN_LINC01633_UP_LS0007","LINC01633","lncRNA gene","no",3.4,0,0,0.012,116,0,0,"0(0)","GBM;PCPG","no","NA","TE_intersect_:184672996|chr1|184672996|184673706|LTR8:ERV1:LTR|128|+","NA","NA"]
["chr1:184711877|184711960:-","chr1:184690506|184702996:-_chr1:184706643|184706808:-_chr1:184708153|184708344:-_chr1:184710394|184710550:-_chr1:184711723|184711877:-_chr1:184711960|184712598:-_chr1:184716888|184717012:-_chr1:184717540|184717623:-_chr1:184719162|184719245:-_chr1:184719443|184719568:-_chr1:184721289|184721386:-_chr1:184723751|184723856:-_chr1:184726255|184726389:-_chr1:184732837|184732990:-_chr1:184734531|184734643:-_chr1:184737025|184737064:-_chr1:184737611|184737711:-_chr1:184749547|184749592:-_chr1:184754489|184754873:-","UN_EDEM3_LS0015","EDEM3","protein coding gene","no",1.64,0,0,0.013,121,0,0,"0(0)","CHOL;GBM;LAML","no","TE_intersect_:184711931|chr1|184711931|184712225|AluY:Alu:SINE|102|-","NA","intron_intersect_chr1:184711877|184712433","intron_intersect_chr1:184711877|184712433"]
["chr1:185093276|185094521:+","chr1:185086197|185087640:+_chr1:185091579|185091739:+_chr1:185093061|185093276:+_chr1:185094521|185094570:+_chr1:185098072|185098344:+_chr1:185099791|185099962:+_chr1:185100200|185101057:+","UN_RNF2_LS0016","RNF2","protein coding gene","no",3.62,0,0,0.003,33,0,0,"0(0)","LAML","no","NA","TE_intersect_:185094440|chr1|185094440|185094802|L2a:L2:LINE|281|+","intron_intersect_chr1:185093276|185098072","intron_intersect_chr1:185093276|185098072"]
["chr1:185094570|185098072:+","chr1:185086197|185087640:+_chr1:185091579|185091739:+_chr1:185093061|185093276:+_chr1:185094521|185094570:+_chr1:185098072|185098344:+_chr1:185099791|185099962:+_chr1:185100200|185101057:+","UN_RNF2_LS0018","RNF2","protein coding gene","no",4.11,0,0,0.003,33,0,0,"0(0)","LAML","no","TE_intersect_:185094440|chr1|185094440|185094802|L2a:L2:LINE|281|+","NA","intron_intersect_chr1:185093276|185098072","exon_intersect_chr1:185098072|185098344"]
["chr1:185271389|185276034:+","chr1:185171712|185175113:+_chr1:185180391|185180450:+_chr1:185181946|185182057:+_chr1:185184243|185184344:+_chr1:185184743|185184931:+_chr1:185190549|185190642:+_chr1:185202654|185202799:+_chr1:185204700|185204863:+_chr1:185206625|185206763:+_chr1:185214507|185214655:+_chr1:185221849|185222036:+_chr1:185231577|185231708:+_chr1:185271323|185271389:+_chr1:185276034|185276082:+_chr1:185276604|185276668:+_chr1:185290674|185292386:+","UN_SWT1_LS0037","SWT1","protein coding gene","no",1.57,0,0,0.003,25,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:185271389|185276604","intron_intersect_chr1:185271389|185276604"]
["chr1:185276082|185276604:+","chr1:185275849|185276082:+_chr1:185276604|185276668:+_chr1:185290674|185291803:+","UN_SWT1_LS0038","SWT1","protein coding gene","no",9.76,0,0,0.003,32,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:185271389|185276604","exon_intersect_chr1:185276604|185276668"]
["chr1:185311322|185312485:-","chr1:185307680|185309511:-_chr1:185311095|185311322:-_chr1:185312485|185317273:-","UN_IVNS1ABP_LS0033","IVNS1ABP","protein coding gene","no",3.33,0,0,0.006,59,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:185311322|185316953","intron_intersect_chr1:185311322|185316953"]
["chr1:185317356|185370668:+","chr1:185317250|185317356:+_chr1:185370668|185370789:+_chr1:185373618|185373728:+_chr1:185374397|185377134:+","UN_RNU7-183P_UP_LS0003","RNU7-183P","small non-coding RNA gene","no",0.84,0,0,0.007,63,0,0,"0(0)","OV","no","NA","TE_intersect_:185370638|chr1|185370638|185370815|AluJb:Alu:SINE|168|-","NA","NA"]
["chr1:185933824|185960631:+","chr1:185734448|185735047:+_chr1:185846026|185846096:+_chr1:185864470|185864628:+_chr1:185865741|185865863:+_chr1:185909337|185909508:+_chr1:185911674|185911780:+_chr1:185922379|185922499:+_chr1:185923390|185923653:+_chr1:185925047|185925191:+_chr1:185928546|185928667:+_chr1:185933549|185933824:+_chr1:185960631|185961689:+","UN_HMCN1_LS0002","HMCN1","protein coding gene","no",3.87,0,0,0.006,53,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:185933824|185957069","intron_intersect_chr1:185957140|185962518"]
["chr1:186136168|186136294:-","chr1:186132430|186136168:-_chr1:186136294|186136481:-_chr1:186137772|186137933:-_chr1:186146474|186146876:-","UN_HMCN1_LS0032","HMCN1","protein coding gene","no",4.29,0,0,0.002,17,0,0,"0(0)","DLBC","no","TE_intersect_:186136271|chr1|186136271|186136445|MIRb:MIR:SINE|272|-","TE_intersect_:186136024|chr1|186136024|186136187|AluSx1:Alu:SINE|110|+","intron_intersect_chr1:186132409|186136668","intron_intersect_chr1:186132409|186136668"]
["chr1:186136481|186137772:-","chr1:186132430|186136168:-_chr1:186136294|186136481:-_chr1:186137772|186137933:-_chr1:186146474|186146876:-","UN_HMCN1_LS0033","HMCN1","protein coding gene","no",3.21,0,0,0.001,13,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:186137668|186137802","intron_intersect_chr1:186132409|186136668"]
["chr1:186307805|186307878:-","chr1:186306456|186306860:-_chr1:186307494|186307805:-_chr1:186307878|186307953:-_chr1:186308161|186308336:-_chr1:186308406|186308840:-_chr1:186308898|186311436:-","UN_PRG4_LS0114","PRG4","protein coding gene","no",17.43,0,0,0.002,17,0,0,"0(0)","MESO","no","NA","NA","exon_intersect_chr1:186306318|186309140","exon_intersect_chr1:186306318|186309140"]
["chr1:186332361|186333122:-","chr1:186318505|186318603:-_chr1:186318733|186318828:-_chr1:186320312|186320418:-_chr1:186322318|186322412:-_chr1:186322518|186322586:-_chr1:186323686|186323870:-_chr1:186325764|186325854:-_chr1:186326104|186326235:-_chr1:186327460|186327660:-_chr1:186331498|186331581:-_chr1:186332195|186332361:-_chr1:186333122|186333394:-_chr1:186334325|186334533:-_chr1:186335068|186335129:-_chr1:186335338|186335543:-_chr1:186336496|186336694:-_chr1:186337013|186337156:-_chr1:186338033|186338243:-_chr1:186339642|186339772:-_chr1:186341028|186341159:-_chr1:186341252|186341389:-_chr1:186343326|186343473:-_chr1:186343906|186344090:-_chr1:186344375|186344578:-_chr1:186345580|186345696:-_chr1:186346135|186346287:-_chr1:186347292|186347458:-_chr1:186350223|186350388:-_chr1:186351330|186351470:-_chr1:186351976|186352110:-_chr1:186353688|186353850:-_chr1:186355410|186355558:-_chr1:186355635|186355768:-_chr1:186356286|186356449:-_chr1:186357397|186357623:-_chr1:186358543|186358650:-_chr1:186359799|186359996:-_chr1:186360273|186360364:-_chr1:186360765|186360905:-_chr1:186361622|186361709:-_chr1:186361789|186361869:-_chr1:186362288|186362380:-_chr1:186362837|186363001:-_chr1:186363342|186363445:-_chr1:186367886|186367982:-_chr1:186370970|186371043:-_chr1:186373359|186373463:-_chr1:186374878|186375186:-_chr1:186375559|186375693:-","UN_TPR_LS0040","TPR","protein coding gene","yes",8.17,0,0,0.007,69,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:186333122|186333394","intron_intersect_chr1:186332343|186333122"]
["chr1:186911389|186913496:+","chr1:186828962|186829035:+_chr1:186849316|186849480:+_chr1:186854286|186854387:+_chr1:186870435|186870516:+_chr1:186893011|186893159:+_chr1:186894098|186894211:+_chr1:186906965|186907002:+_chr1:186911248|186911389:+_chr1:186913496|186913556:+_chr1:186932763|186932899:+_chr1:186939008|186939230:+_chr1:186939980|186940094:+_chr1:186946637|186946774:+_chr1:186946869|186946961:+_chr1:186950657|186950728:+_chr1:186956102|186956344:+_chr1:186964163|186964306:+_chr1:186965409|186965593:+_chr1:186977593|186977788:+_chr1:186979315|186979472:+_chr1:186988377|186988981:+","UN_PLA2G4A_LS0022","PLA2G4A","protein coding gene","no",1.39,0.03,0,0.002,19,0.001,1,"0(0)","LAML","no","NA","TE_intersect_:186913443|chr1|186913443|186913641|HAL1b:L1:LINE|318|+","intron_intersect_chr1:186911389|186932763","intron_intersect_chr1:186911389|186932763"]
["chr1:187577|187781:-","chr1:184872|185559:-_chr1:186317|187287:-_chr1:187376|187577:-_chr1:187781|187886:-_chr1:188022|188105:-_chr1:188130|188266:-_chr1:188439|188584:-_chr1:188791|190971:-","UN_FO538757.1_LS0022","FO538757.1","pseudogene","no",1.85,0.01,0,0.01,99,0.001,1,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:187755|187886","intron_intersect_chr1:187577|187755"]
["chr1:187641481|187667777:+","chr1:187641208|187641481:+_chr1:187667777|187670206:+","UN_ERVMER61-1_LS0069","ERVMER61-1","lncRNA gene","no",3.28,0,0,0.017,159,0,0,"0(0)","OV;SKCM","no","TE_intersect_:187641443|chr1|187641443|187642121|MER61-int:ERV1:LTR|190|+","NA","intron_intersect_chr1:187641481|187641616","NA"]
["chr1:187641481|187685701:+","chr1:187641257|187641481:+_chr1:187685701|187686874:+","UN_ERVMER61-1_LS0072","ERVMER61-1","lncRNA gene","no",5.07,0,0,0.035,340,0,0,"0(0)","COAD;OV;READ;SKCM;STAD","no","TE_intersect_:187641443|chr1|187641443|187642121|MER61-int:ERV1:LTR|190|+","NA","intron_intersect_chr1:187641481|187641616","NA"]
["chr1:187960690|187996147:+","chr1:187960491|187960690:+_chr1:187996147|187996346:+_chr1:188001371|188001462:+_chr1:188042892|188042987:+_chr1:188097139|188097218:+_chr1:188143897|188143961:+_chr1:188365533|188370085:+","UN_AL136372.2_UP_LS0005","AL136372.2","lncRNA gene","no",2.96,0,0,0.003,25,0,0,"0(0)","LIHC","no","TE_intersect_:187960651|chr1|187960651|187960915|MLT1A0:ERVL-MaLR:LTR|217|-","TE_intersect_:187995947|chr1|187995947|187996461|L1MDa:L1:LINE|285|+","NA","NA"]
["chr1:187960697|187996147:+","chr1:187960451|187960697:+_chr1:187996147|187996346:+_chr1:188001371|188001462:+_chr1:188042892|188042987:+_chr1:188097139|188097218:+_chr1:188143897|188144983:+","UN_AL136372.2_UP_LS0006","AL136372.2","lncRNA gene","no",20.45,0.21,0,0.014,130,0.001,1,"0(0)","CHOL;LIHC","no","TE_intersect_:187960651|chr1|187960651|187960915|MLT1A0:ERVL-MaLR:LTR|217|-","TE_intersect_:187995947|chr1|187995947|187996461|L1MDa:L1:LINE|285|+","NA","NA"]
["chr1:187960697|188001371:+","chr1:187960492|187960697:+_chr1:188001371|188001462:+_chr1:188042892|188042987:+_chr1:188097139|188097218:+_chr1:188143897|188144983:+","UN_AL136372.2_UP_LS0007","AL136372.2","lncRNA gene","no",5.95,0,0,0.003,26,0,0,"0(0)","LIHC","no","TE_intersect_:187960651|chr1|187960651|187960915|MLT1A0:ERVL-MaLR:LTR|217|-","TE_intersect_:188001357|chr1|188001357|188001476|FLAM_C:Alu:SINE|192|-","NA","NA"]
["chr1:188001462|188042892:+","chr1:187960451|187960697:+_chr1:187996147|187996346:+_chr1:188001371|188001462:+_chr1:188042892|188042987:+_chr1:188097139|188097218:+_chr1:188143897|188144983:+","UN_AL596211.1_UP_LS0001","AL596211.1","lncRNA gene","no",19.75,0.28,0,0.016,150,0.001,1,"0(0)","CHOL;LIHC","no","TE_intersect_:188001357|chr1|188001357|188001476|FLAM_C:Alu:SINE|192|-","NA","NA","NA"]
["chr1:188042987|188097139:+","chr1:187960451|187960697:+_chr1:187996147|187996346:+_chr1:188001371|188001462:+_chr1:188042892|188042987:+_chr1:188097139|188097218:+_chr1:188143897|188144983:+","AL136372.2_LS002","AL136372.2","lncRNA gene","no",15.15,0.2,0,0.042,399,0.003,2,"0(0)","CHOL;LIHC","yes","NA","NA","NA","NA"]
["chr1:188097218|188143897:+","chr1:187960451|187960697:+_chr1:187996147|187996346:+_chr1:188001371|188001462:+_chr1:188042892|188042987:+_chr1:188097139|188097218:+_chr1:188143897|188144983:+","AL136372.2_LS003","AL136372.2","lncRNA gene","no",9.07,0,0,0.042,406,0,0,"0(0)","BLCA;CHOL;ESCA;LIHC;LUAD;LUSC;OV;SKCM;TGCT;UCS","yes","TE_intersect_:188097146|chr1|188097146|188097479|LTR49-int:ERV1:LTR|255|+","TE_intersect_:188143862|chr1|188143862|188143932|L2b:L2:LINE|300|+","NA","NA"]
["chr1:188143961|188365533:+","chr1:188013230|188013999:+_chr1:188042892|188042987:+_chr1:188097139|188097218:+_chr1:188143897|188143961:+_chr1:188365533|188370067:+","UN_AL929288.1_UP_LS0002","AL929288.1","lncRNA gene","no",4.33,0,0,0.005,51,0,0,"0(0)","CHOL;LIHC","no","NA","TE_intersect_:188364120|chr1|188364120|188365575|L1M7:L1:LINE|324|-","NA","NA"]
["chr1:188595185|188655569:+","chr1:188595100|188595185:+_chr1:188655569|188655636:+_chr1:188656817|188657094:+","UN_AL929288.2_UP_LS0005","AL929288.2","pseudogene","no",6.77,0,0,0.004,35,0,0,"0(0)","SKCM","no","TE_intersect_:188594895|chr1|188594895|188595267|THE1C:ERVL-MaLR:LTR|171|+","TE_intersect_:188655322|chr1|188655322|188655694|L1MCa:L1:LINE|259|-","NA","NA"]
["chr1:188643106|188655569:+","chr1:188642603|188643106:+_chr1:188655569|188655636:+_chr1:188656817|188665800:+","UN_AL929288.2_UP_LS0009","AL929288.2","pseudogene","no",8.24,0,0,0.002,21,0,0,"0(0)","UCS","no","TE_intersect_:188643086|chr1|188643086|188643198|L1MC2:L1:LINE|307|-","TE_intersect_:188655322|chr1|188655322|188655694|L1MCa:L1:LINE|259|-","NA","NA"]
["chr1:188655636|188656817:+","chr1:188642603|188643106:+_chr1:188655569|188655636:+_chr1:188656817|188665800:+","UN_AL929288.2_UP_LS0012","AL929288.2","pseudogene","no",7.21,0,0,0.004,43,0,0,"0(0)","SKCM;UCS","no","TE_intersect_:188655322|chr1|188655322|188655694|L1MCa:L1:LINE|259|-","TE_intersect_:188656767|chr1|188656767|188656851|L3:CR1:LINE|244|-","NA","NA"]
["chr1:188705357|188706127:-","chr1:188705254|188705357:-_chr1:188706127|188706285:-_chr1:188710811|188710878:-_chr1:188814465|188814611:-_chr1:188822182|188822283:-","UN_AL592447.1_UP_LS0006","AL592447.1","pseudogene","no",5.81,0,0,0.002,19,0,0,"0(0)","UCS","no","NA","TE_intersect_:188705103|chr1|188705103|188705530|MSTC:ERVL-MaLR:LTR|232|-","exon_intersect_chr1:188705623|188706285","NA"]
["chr1:188710878|188814465:-","chr1:188705254|188705357:-_chr1:188706127|188706285:-_chr1:188710811|188710878:-_chr1:188814465|188814611:-_chr1:188822182|188822283:-","UN_AL592447.1_UP_LS0007","AL592447.1","pseudogene","no",18.8,0,0,0.004,43,0,0,"0(0)","UCS","no","TE_intersect_:188812904|chr1|188812904|188814528|LTR12C:ERV1:LTR|73|+","TE_intersect_:188710752|chr1|188710752|188711521|L1MCa:L1:LINE|240|+","NA","exon_intersect_chr1:188710811|188710880"]
["chr1:188797658|188814465:-","chr1:188790890|188797658:-_chr1:188814465|188814611:-_chr1:188822182|188822387:-","UN_AL691515.1_UP_LS0003","AL691515.1","lncRNA gene","no",5.02,0,0,0.003,27,0,0,"0(0)","UCS","no","TE_intersect_:188812904|chr1|188812904|188814528|LTR12C:ERV1:LTR|73|+","TE_intersect_:188795932|chr1|188795932|188797668|L1PA7:L1:LINE|79|-","NA","NA"]
["chr1:188814611|188822182:-","chr1:188705254|188705357:-_chr1:188706127|188706285:-_chr1:188710811|188710878:-_chr1:188814465|188814611:-_chr1:188822182|188822283:-","UN_AL691515.1_UP_LS0004","AL691515.1","lncRNA gene","no",3.43,0,0,0.006,58,0,0,"0(0)","UCS","no","NA","TE_intersect_:188814528|chr1|188814528|188814624|L1PA10:L1:LINE|95|+","NA","NA"]
["chr1:18909720|18910434:+","chr1:18909649|18909720:+_chr1:18910434|18911058:+_chr1:18912596|18912720:+_chr1:18913400|18913638:+","UN_AL080251.1_LS0024","AL080251.1","protein coding gene","no",5.24,0,0,0.004,36,0,0,"0(0)","SKCM","no","TE_intersect_:18909439|chr1|18909439|18909778|THE1C:ERVL-MaLR:LTR|125|+","NA","intron_intersect_chr1:18908666|18910342","exon_intersect_chr1:18910342|18910472"]
["chr1:18911058|18912596:+","chr1:18909649|18909720:+_chr1:18910434|18911058:+_chr1:18912596|18912720:+_chr1:18913400|18913638:+","UN_AL080251.1_LS0026","AL080251.1","protein coding gene","no",5.93,0,0,0.003,32,0,0,"0(0)","SKCM","no","TE_intersect_:18910901|chr1|18910901|18911066|MIR:MIR:SINE|290|+","TE_intersect_:18912385|chr1|18912385|18912623|MIRc:MIR:SINE|290|-","intron_intersect_chr1:18910472|18911384","intron_intersect_chr1:18912083|18916903"]
["chr1:18912720|18913400:+","chr1:18909649|18909720:+_chr1:18910434|18911058:+_chr1:18912596|18912720:+_chr1:18913400|18913638:+","UN_AL080251.1_LS0027","AL080251.1","protein coding gene","no",5.89,0,0,0.004,39,0,0,"0(0)","SKCM","no","TE_intersect_:18912623|chr1|18912623|18912832|MIR:MIR:SINE|333|-","NA","intron_intersect_chr1:18912083|18916903","intron_intersect_chr1:18912083|18916903"]
["chr1:189150759|189307729:+","chr1:189149639|189149876:+_chr1:189150542|189150759:+_chr1:189307729|189307878:+_chr1:189389825|189389879:+_chr1:189452041|189452162:+","UN_LINC01701_UP_LS0006","LINC01701","lncRNA gene","no",2.87,0,0,0.012,116,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:189150730|chr1|189150730|189150929|MER76:ERVL:LTR|259|-","TE_intersect_:189307608|chr1|189307608|189308032|MER47B:TcMar-Tigger:DNA|205|+","NA","NA"]
["chr1:189307878|189389825:+","chr1:189149639|189149876:+_chr1:189150542|189150759:+_chr1:189307729|189307878:+_chr1:189389825|189389879:+_chr1:189452041|189452162:+","UN_LINC01701_UP_LS0010","LINC01701","lncRNA gene","no",2.47,0,0,0.012,118,0,0,"0(0)","ESCA","no","TE_intersect_:189307608|chr1|189307608|189308032|MER47B:TcMar-Tigger:DNA|205|+","NA","NA","NA"]
["chr1:189934090|189935238:-","chr1:189933247|189934090:-_chr1:189935238|189935605:-_chr1:189936506|189936630:-_chr1:189940154|189940264:-_chr1:189940962|189941113:-_chr1:190019790|190019904:-","UN_AL591504.1_UP_LS0001","AL591504.1","lncRNA gene","no",2.57,0,0,0.014,134,0,0,"0(0)","ESCA;HNSC","no","NA","TE_intersect_:189933884|chr1|189933884|189934100|MLT1I-int:ERVL-MaLR:LTR|362|+","NA","NA"]
["chr1:189935605|189940154:-","chr1:189933249|189935605:-_chr1:189940154|189940266:-","UN_AL591504.1_UP_LS0002","AL591504.1","lncRNA gene","no",3.32,0,0,0.016,152,0,0,"0(0)","BLCA;ESCA;HNSC","no","TE_intersect_:189939938|chr1|189939938|189940438|MLT1F:ERVL-MaLR:LTR|265|-","TE_intersect_:189935563|chr1|189935563|189935622|AluY:Alu:SINE|119|+","NA","NA"]
["chr1:189940264|189940962:-","chr1:189933247|189934090:-_chr1:189935238|189935605:-_chr1:189936506|189936630:-_chr1:189940154|189940264:-_chr1:189940962|189941113:-_chr1:190019790|190019904:-","UN_AL591504.1_UP_LS0005","AL591504.1","lncRNA gene","no",3.84,0,0,0.02,190,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC","no","NA","TE_intersect_:189939938|chr1|189939938|189940438|MLT1F:ERVL-MaLR:LTR|265|-","NA","NA"]
["chr1:189941113|190019790:-","chr1:189940960|189941113:-_chr1:190019790|190019887:-","UN_AL591504.1_UP_LS0008","AL591504.1","lncRNA gene","no",3.43,0,0,0.021,199,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC","no","TE_intersect_:190019571|chr1|190019571|190020126|MER6A:TcMar-Tigger:DNA|185|-","NA","NA","NA"]
["chr1:190281750|190379854:-","chr1:190097662|190099134:-_chr1:190160668|190160890:-_chr1:190226082|190226318:-_chr1:190234372|190234477:-_chr1:190264865|190265055:-_chr1:190281560|190281750:-_chr1:190379854|190379994:-_chr1:190454655|190454940:-_chr1:190474408|190474801:-","UN_BRINP3_LS0017","BRINP3","protein coding gene","no",1.81,0,0,0.004,37,0,0,"0(0)","LGG","no","TE_intersect_:190379717|chr1|190379717|190380026|AluSx3:Alu:SINE|104|+","NA","intron_intersect_chr1:190362270|190454655","intron_intersect_chr1:190281750|190302703"]
["chr1:190478492|190478758:+","chr1:190478233|190478492:+_chr1:190478758|190479140:+_chr1:190480345|190481604:+","UN_AL391645.1_UP_LS0002","AL391645.1","lncRNA gene","no",1.26,0,0,0.003,32,0,0,"0(0)","LGG","no","NA","NA","NA","intron_intersect_chr1:190478631|190479006"]
["chr1:190478631|190478758:+","chr1:190478551|190478631:+_chr1:190478758|190479140:+_chr1:190480345|190481554:+","UN_LINC01351_LS0001","LINC01351","lncRNA gene","no",3.06,0,0,0.013,124,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:190478631|190479006","intron_intersect_chr1:190478631|190479006"]
["chr1:190478631|190479041:+","chr1:190478551|190478631:+_chr1:190479041|190479140:+_chr1:190480345|190481527:+","UN_LINC01351_LS0002","LINC01351","lncRNA gene","no",3.1,0,0,0.016,152,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:190478631|190479006","exon_intersect_chr1:190479006|190479140"]
["chr1:190625033|190738438:+","chr1:190624890|190625033:+_chr1:190738438|190738510:+_chr1:190791514|190791563:+_chr1:190793506|190793596:+_chr1:190799801|190801658:+","LINC01720_LS001","LINC01720","lncRNA gene","no",7.33,0,0,0.001,9,0,0,"0(0)","DLBC","yes","TE_intersect_:190624059|chr1|190624059|190625328|L1MC4:L1:LINE|297|-","TE_intersect_:190738330|chr1|190738330|190738639|L2:L2:LINE|262|+","intron_intersect_chr1:190625033|190738438","exon_intersect_chr1:190738438|190738510"]
["chr1:190738510|190791514:+","chr1:190624890|190625033:+_chr1:190738438|190738510:+_chr1:190791514|190791563:+_chr1:190793506|190793596:+_chr1:190799801|190801658:+","LINC01720_LS002","LINC01720","lncRNA gene","no",7.94,0,0,0.001,9,0,0,"0(0)","DLBC","yes","TE_intersect_:190738330|chr1|190738330|190738639|L2:L2:LINE|262|+","TE_intersect_:190791250|chr1|190791250|190791652|MER74C:ERVL:LTR|189|+","intron_intersect_chr1:190738510|190781787","exon_intersect_chr1:190791514|190791563"]
["chr1:19088977|19090315:-","chr1:19074567|19074896:-_chr1:19076740|19076902:-_chr1:19077976|19078066:-_chr1:19081349|19081573:-_chr1:19084504|19084698:-_chr1:19086145|19086270:-_chr1:19086679|19086821:-_chr1:19087816|19087929:-_chr1:19088759|19088977:-_chr1:19090315|19090463:-","UN_UBR4_LS0049","UBR4","protein coding gene","no",2.1,0,0,0.003,30,0,0,"0(0)","READ","no","TE_intersect_:19090043|chr1|19090043|19090396|L2c:L2:LINE|362|+","NA","intron_intersect_chr1:19088977|19092733","intron_intersect_chr1:19088977|19092733"]
["chr1:192160439|192161457:+","chr1:192158676|192158756:+_chr1:192159220|192159321:+_chr1:192160378|192160439:+_chr1:192161457|192161487:+_chr1:192181292|192181454:+","UN_RGS18_LS0003","RGS18","protein coding gene","no",4.82,0,0,0.002,19,0,0,"0(0)","LAML","no","NA","TE_intersect_:192161356|chr1|192161356|192162015|LTR101_Mam:ERVL:LTR|320|-","exon_intersect_chr1:192160378|192160683","exon_intersect_chr1:192161453|192161487"]
["chr1:192238546|192239713:-","chr1:192236103|192236421:-_chr1:192238480|192238546:-_chr1:192239713|192239790:-_chr1:192387632|192387814:-_chr1:192476039|192476178:-_chr1:192567147|192567216:-_chr1:192593599|192593657:-_chr1:192597534|192597621:-","AL390957.1_LS004","AL390957.1","lncRNA gene","no",3.4,0,0,0.01,96,0,0,"0(0)","GBM;OV","yes","NA","NA","NA","NA"]
["chr1:192343047|192347328:+","chr1:192316748|192317105:+_chr1:192342977|192343047:+_chr1:192347328|192347389:+_chr1:192352047|192352213:+_chr1:192365921|192367285:+","UN_RGS21_LS0002","RGS21","protein coding gene","no",54.39,0,0,0.002,20,0,0,"0(0)","DLBC;THYM","no","NA","NA","intron_intersect_chr1:192343047|192347313","exon_intersect_chr1:192347313|192347389"]
["chr1:192347389|192352047:+","chr1:192316992|192317105:+_chr1:192342977|192343047:+_chr1:192347313|192347389:+_chr1:192352047|192352213:+_chr1:192365921|192367285:+","RGS21_LS003","RGS21","protein coding gene","no",86.39,0,0.84,0.003,24,0,0,"0.001(9)","THYM","yes","NA","NA","intron_intersect_chr1:192347389|192352047","exon_intersect_chr1:192352047|192352213"]
["chr1:192609936|192636244:+","chr1:192609115|192609936:+_chr1:192636244|192636317:+_chr1:192637590|192637660:+_chr1:192644331|192644399:+_chr1:192647926|192647987:+_chr1:192658201|192658367:+_chr1:192659338|192659862:+","UN_AL390957.1_LS0043","AL390957.1","lncRNA gene","no",3.67,0,0,0.003,28,0,0,"0(0)","DLBC","no","NA","NA","NA","exon_intersect_chr1:192636138|192636317"]
["chr1:192627421|192628887:-","chr1:192593599|192593657:-_chr1:192627341|192627421:-_chr1:192628887|192628951:-","AL390957.1_LS019","AL390957.1","lncRNA gene","no",1.8,0,0,0.001,13,0,0,"0(0)","DLBC","yes","NA","NA","NA","NA"]
["chr1:192627421|192635616:-","chr1:192491722|192491969:-_chr1:192567147|192567216:-_chr1:192593599|192593657:-_chr1:192627341|192627421:-_chr1:192635616|192635648:-","UN_AL390957.1_LS0047","AL390957.1","lncRNA gene","no",2.57,0,0,0.002,23,0,0,"0(0)","DLBC","no","TE_intersect_:192635575|chr1|192635575|192635759|L3:CR1:LINE|294|+","NA","NA","NA"]
["chr1:192711959|192712835:+","chr1:192711837|192711959:+_chr1:192712835|192712952:+","UN_AL390957.1_LS0055","AL390957.1","lncRNA gene","no",4,0,0,0.001,13,0,0,"0(0)","KICH","no","TE_intersect_:192711778|chr1|192711778|192712021|MLT1F2:ERVL-MaLR:LTR|211|+","TE_intersect_:192712649|chr1|192712649|192712994|MLT1A0:ERVL-MaLR:LTR|241|+","NA","NA"]
["chr1:192742632|192755329:+","chr1:192742553|192742632:+_chr1:192755329|192755389:+_chr1:192758633|192758714:+_chr1:192785531|192785647:+_chr1:192788269|192788694:+","UN_AL390957.1_LS0062","AL390957.1","lncRNA gene","no",3.09,0,0,0.008,76,0,0,"0(0)","ESCA;LIHC","no","NA","NA","NA","NA"]
["chr1:192742632|192758633:+","chr1:192742494|192742632:+_chr1:192758633|192758714:+_chr1:192788269|192788643:+","UN_AL390957.1_LS0063","AL390957.1","lncRNA gene","no",5.22,0.03,0,0.017,167,0.001,1,"0(0)","BLCA;DLBC;LIHC","no","NA","TE_intersect_:192757853|chr1|192757853|192760411|L1MC1:L1:LINE|127|-","NA","NA"]
["chr1:192755389|192758633:+","chr1:192742553|192742632:+_chr1:192755329|192755389:+_chr1:192758633|192758714:+_chr1:192785531|192785647:+_chr1:192788269|192788694:+","UN_AL390957.1_LS0064","AL390957.1","lncRNA gene","no",3.13,0,0,0.011,103,0,0,"0(0)","ESCA;LIHC","no","TE_intersect_:192755337|chr1|192755337|192755966|Charlie13a:hAT-Charlie:DNA|288|-","TE_intersect_:192757853|chr1|192757853|192760411|L1MC1:L1:LINE|127|-","NA","NA"]
["chr1:192757288|192758633:+","chr1:192757219|192757288:+_chr1:192758633|192758714:+_chr1:192788269|192788606:+","UN_AL390957.1_LS0066","AL390957.1","lncRNA gene","no",2.51,0,0,0.005,48,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:192757853|chr1|192757853|192760411|L1MC1:L1:LINE|127|-","NA","NA"]
["chr1:192758714|192785531:+","chr1:192742553|192742632:+_chr1:192755329|192755389:+_chr1:192758633|192758714:+_chr1:192785531|192785647:+_chr1:192788269|192788694:+","UN_AL390957.1_LS0068","AL390957.1","lncRNA gene","no",3.61,0,0,0.005,46,0,0,"0(0)","LIHC","no","TE_intersect_:192757853|chr1|192757853|192760411|L1MC1:L1:LINE|127|-","NA","NA","NA"]
["chr1:192857127|192863982:+","chr1:192856359|192857127:+_chr1:192863982|192864277:+","UN_AL390957.1_LS0075","AL390957.1","lncRNA gene","no",3.29,0,0,0.006,55,0,0,"0(0)","HNSC","no","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","NA","NA","NA"]
["chr1:192857211|192863982:+","chr1:192856401|192857211:+_chr1:192863982|192864351:+","UN_AL390957.1_LS0080","AL390957.1","lncRNA gene","no",4.66,0,0,0.006,57,0,0,"0(0)","TGCT","no","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","NA","NA","NA"]
["chr1:192857309|192857359:+","chr1:192856378|192857211:+_chr1:192857261|192857309:+_chr1:192857359|192857583:+_chr1:192857759|192859059:+","UN_AL390957.1_LS0081","AL390957.1","lncRNA gene","no",6.86,0,0,0.002,22,0,0,"0(0)","ESCA","no","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","NA","NA"]
["chr1:192857309|192857408:+","chr1:192857107|192857309:+_chr1:192857408|192857616:+","UN_AL390957.1_LS0082","AL390957.1","lncRNA gene","no",3.69,0,0,0.006,55,0,0,"0(0)","ESCA;OV","no","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","NA","NA"]
["chr1:192857583|192857711:+","chr1:192856306|192857583:+_chr1:192857711|192859032:+","UN_AL390957.1_LS0087","AL390957.1","lncRNA gene","no",3.16,0,0,0.002,19,0,0,"0(0)","ESCA","no","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","TE_intersect_:192856341|chr1|192856341|192858401|SVA_D:SVA:Retroposon|37|+","NA","NA"]
["chr1:192935903|192948103:-","chr1:192935748|192935903:-_chr1:192948103|192948317:-","UN_AL390957.1_LS0097","AL390957.1","lncRNA gene","no",2.84,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","TE_intersect_:192935729|chr1|192935729|192936054|MLT1L:ERVL-MaLR:LTR|314|-","exon_intersect_chr1:192948103|192948257","NA"]
["chr1:193304938|193312023:+","chr1:193304836|193304938:+_chr1:193312023|193312103:+_chr1:193315252|193315390:+_chr1:193349133|193349275:+_chr1:193351104|193351239:+_chr1:193355762|193356638:+","UN_LINC01031_LS0001","LINC01031","lncRNA gene","no",3.16,0,0,0.01,100,0,0,"0(0)","PRAD","no","TE_intersect_:193304874|chr1|193304874|193305045|LTR12C:ERV1:LTR|35|-","NA","intron_intersect_chr1:193304938|193349133","intron_intersect_chr1:193304938|193349133"]
["chr1:193312103|193315252:+","chr1:193304836|193304938:+_chr1:193312023|193312103:+_chr1:193315252|193315390:+_chr1:193349133|193349275:+_chr1:193351104|193351239:+_chr1:193355762|193356638:+","UN_LINC01031_LS0003","LINC01031","lncRNA gene","no",2.33,0,0,0.006,57,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:193304938|193349133","intron_intersect_chr1:193304938|193349133"]
["chr1:193312103|193349133:+","chr1:193304795|193304938:+_chr1:193312023|193312103:+_chr1:193349133|193349275:+_chr1:193351104|193351239:+_chr1:193355762|193356643:+","UN_LINC01031_LS0004","LINC01031","lncRNA gene","no",3.03,0,0,0.005,45,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:193304938|193349133","exon_intersect_chr1:193349133|193349275"]
["chr1:193315390|193349133:+","chr1:193304836|193304938:+_chr1:193312023|193312103:+_chr1:193315252|193315390:+_chr1:193349133|193349275:+_chr1:193351104|193351239:+_chr1:193355762|193356638:+","UN_LINC01031_LS0007","LINC01031","lncRNA gene","no",1.64,0,0,0.004,34,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:193304938|193349133","exon_intersect_chr1:193349133|193349275"]
["chr1:193460211|193461572:+","chr1:193315261|193315390:+_chr1:193349133|193349275:+_chr1:193351104|193351239:+_chr1:193454274|193454402:+_chr1:193457641|193457750:+_chr1:193460118|193460211:+_chr1:193461572|193465696:+","UN_AL357793.1_UP_LS0016","AL357793.1","lncRNA gene","no",1.92,0,0,0.006,56,0,0,"0(0)","PRAD","no","NA","NA","NA","NA"]
["chr1:193673292|193886321:+","chr1:193473217|193473376:+_chr1:193673210|193673292:+_chr1:193886321|193886417:+_chr1:193899287|193899367:+_chr1:193908372|193909135:+","UN_AL356272.1_UP_LS0005","AL356272.1","lncRNA gene","no",2.2,0,0,0.005,44,0,0,"0(0)","LIHC","no","TE_intersect_:193673024|chr1|193673024|193673374|THE1D:ERVL-MaLR:LTR|138|+","TE_intersect_:193885749|chr1|193885749|193887379|LOR1-int:ERV1:LTR|130|+","NA","NA"]
["chr1:194167715|194232136:-","chr1:194153672|194158168:-_chr1:194167495|194167715:-_chr1:194232136|194232442:-","UN_RPL23AP22_UP_LS0003","RPL23AP22","pseudogene","no",1.83,0,0,0.003,29,0,0,"0(0)","THYM","no","TE_intersect_:194231787|chr1|194231787|194232308|Tigger2a:TcMar-Tigger:DNA|171|-","NA","NA","intron_intersect_chr1:194149856|194188967"]
["chr1:19419750|19435895:-","chr1:19357445|19357563:-_chr1:19378540|19378653:-_chr1:19385505|19385626:-_chr1:19419661|19419750:-_chr1:19435895|19436129:-","UN_CAPZB_LS0068","CAPZB","protein coding gene","no",15.87,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:19424671|19448834","exon_intersect_chr1:19419661|19419751"]
["chr1:19419750|19483884:-","chr1:19357445|19357563:-_chr1:19378540|19378653:-_chr1:19385505|19385626:-_chr1:19419661|19419750:-_chr1:19483884|19484100:-","UN_CAPZB_LS0075","CAPZB","protein coding gene","no",4.31,0,0,0.006,54,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:19449330|19484190","exon_intersect_chr1:19419661|19419751"]
["chr1:194232227|194289596:-","chr1:194153608|194158168:-_chr1:194159280|194159316:-_chr1:194167495|194167715:-_chr1:194232136|194232227:-_chr1:194289596|194289720:-","UN_RPL23AP22_UP_LS0009","RPL23AP22","pseudogene","no",2.01,0,0,0.002,18,0,0,"0(0)","THYM","no","NA","TE_intersect_:194231787|chr1|194231787|194232308|Tigger2a:TcMar-Tigger:DNA|171|-","NA","NA"]
["chr1:194550754|194592005:+","chr1:194534387|194534466:+_chr1:194550603|194550754:+_chr1:194592005|194592162:+","UN_AL353072.1_UP_LS0006","AL353072.1","pseudogene","no",4.55,0,0,0.004,39,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:196149208|196160370:-","chr1:196148880|196149208:-_chr1:196160370|196160494:-_chr1:196160723|196160779:-","UN_LINC01724_UP_LS0003","LINC01724","lncRNA gene","no",5.57,0,0,0.008,80,0,0,"0(0)","MESO;SARC","no","TE_intersect_:196159832|chr1|196159832|196160495|MER57-int:ERV1:LTR|143|-","NA","NA","NA"]
["chr1:196343105|196373140:-","chr1:196225779|196228335:-_chr1:196235986|196236070:-_chr1:196258194|196258494:-_chr1:196259587|196259624:-_chr1:196273468|196273488:-_chr1:196280860|196280988:-_chr1:196282273|196282356:-_chr1:196285657|196285758:-_chr1:196305234|196305345:-_chr1:196315892|196316026:-_chr1:196317148|196317269:-_chr1:196326717|196326889:-_chr1:196331156|196331261:-_chr1:196333847|196334060:-_chr1:196340341|196340570:-_chr1:196342079|196342228:-_chr1:196343056|196343105:-_chr1:196373140|196373248:-_chr1:196398563|196398671:-_chr1:196423050|196423113:-_chr1:196425852|196425988:-_chr1:196428105|196428269:-_chr1:196429577|196429757:-_chr1:196465293|196465387:-_chr1:196467703|196467786:-_chr1:196468994|196469098:-","UN_KCNT2_LS0017","KCNT2","protein coding gene","no",1.38,0,0,0.005,49,0,0,"0(0)","MESO","no","NA","TE_intersect_:196342846|chr1|196342846|196343181|MLT1A0:ERVL-MaLR:LTR|184|+","exon_intersect_chr1:196373140|196373248","intron_intersect_chr1:196343105|196373140"]
["chr1:196706209|196713735:+","chr1:196652004|196652175:+_chr1:196672978|196673163:+_chr1:196673857|196673962:+_chr1:196675989|196676065:+_chr1:196677476|196677667:+_chr1:196679623|196679793:+_chr1:196685064|196685237:+_chr1:196689420|196689614:+_chr1:196690063|196690239:+_chr1:196701318|196705385:+_chr1:196706091|196706209:+_chr1:196713735|196713917:+_chr1:196715593|196715769:+_chr1:196720307|196720407:+_chr1:196725121|196725297:+_chr1:196726470|196726652:+_chr1:196726761|196726940:+_chr1:196728352|196728522:+_chr1:196736824|196737006:+_chr1:196737475|196737660:+_chr1:196740619|196740845:+_chr1:196741875|196742051:+_chr1:196743452|196743628:+_chr1:196830500|196830682:+_chr1:196831797|196832190:+","UN_CFH_LS0028","CFH","protein coding gene","no",3.56,0,0,0.004,41,0,0,"0(0)","LIHC","no","TE_intersect_:196704542|chr1|196704542|196707633|PABL_B-int:ERV1:LTR|370|+","NA","intron_intersect_chr1:196701566|196713735","exon_intersect_chr1:196713735|196713917"]
["chr1:196786610|196788216:+","chr1:196786482|196786610:+_chr1:196788216|196788398:+_chr1:196790045|196790227:+_chr1:196793317|196795411:+","UN_CFHR3_LS0002","CFHR3","protein coding gene","no",2.37,0,0,0.029,282,0,0,"0(0)","BLCA;ESCA;LUAD;LUSC;OV;THYM","no","TE_intersect_:196780803|chr1|196780803|196786955|L1PA3:L1:LINE|43|-","NA","intron_intersect_chr1:196779973|196788216","exon_intersect_chr1:196788216|196788398"]
["chr1:196798090|196805514:-","chr1:196797812|196798090:-_chr1:196805514|196805616:-_chr1:196817978|196818108:-","UN_KCNT2_UP_LS0007","KCNT2","protein coding gene","no",2.86,0,0,0.012,112,0,0,"0(0)","LIHC;LUSC;OV","no","NA","TE_intersect_:196797982|chr1|196797982|196798244|AluJr:Alu:SINE|187|+","NA","NA"]
["chr1:196861422|196887385:-","chr1:196860840|196861422:-_chr1:196887385|196887814:-","UN_KCNT2_UP_LS0015","KCNT2","protein coding gene","no",3.16,0,0,0.01,96,0,0,"0(0)","ESCA","no","TE_intersect_:196887312|chr1|196887312|196887386|MLT1G3:ERVL-MaLR:LTR|200|-","NA","intron_intersect_chr1:196858408|196888014","intron_intersect_chr1:196858408|196888014"]
["chr1:196887578|196922895:-","chr1:196860475|196861422:-_chr1:196887385|196887578:-_chr1:196922895|196923011:-_chr1:196933457|196933735:-","UN_KCNT2_UP_LS0018","KCNT2","protein coding gene","no",3.13,0,0,0.014,138,0,0,"0(0)","ESCA;LUSC;SKCM","no","NA","TE_intersect_:196887420|chr1|196887420|196887627|LTR33B:ERVL:LTR|350|+","intron_intersect_chr1:196918972|196943772","intron_intersect_chr1:196858408|196888014"]
["chr1:196984137|196994083:+","chr1:196975029|196975114:+_chr1:196982885|196983079:+_chr1:196983961|196984137:+_chr1:196994083|196994256:+_chr1:196995717|196995899:+_chr1:196996022|196996201:+_chr1:196998128|196998304:+_chr1:197002482|197002664:+_chr1:197004661|197004843:+_chr1:197008487|197009695:+","UN_CFHR5_LS0003","CFHR5","protein coding gene","no",45.3,0,0,0.002,20,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr1:196984137|196994080","exon_intersect_chr1:196994080|196994256"]
["chr1:197096164|197097282:-","chr1:197084132|197084426:-_chr1:197086803|197088432:-_chr1:197089930|197090084:-_chr1:197090196|197090388:-_chr1:197090850|197091041:-_chr1:197091907|197092056:-_chr1:197093052|197093261:-_chr1:197094084|197094180:-_chr1:197095998|197096164:-_chr1:197097282|197097503:-_chr1:197100431|197105185:-_chr1:197117789|197117983:-_chr1:197121915|197122043:-_chr1:197122159|197122301:-_chr1:197122388|197122595:-_chr1:197124110|197124331:-_chr1:197124870|197125191:-_chr1:197128490|197128665:-_chr1:197129187|197129317:-_chr1:197129915|197130056:-_chr1:197132285|197132352:-_chr1:197133350|197133595:-_chr1:197135096|197135242:-_chr1:197139767|197139871:-_chr1:197142331|197143810:-_chr1:197143957|197144100:-_chr1:197146141|197146694:-","UN_ASPM_LS0014","ASPM","protein coding gene","no",1.47,0,0,0.012,115,0,0,"0(0)","TGCT","no","TE_intersect_:197097007|chr1|197097007|197097488|LTR15:ERV1:LTR|100|+","NA","intron_intersect_chr1:197096164|197100431","intron_intersect_chr1:197096164|197100431"]
["chr1:197273269|197273387:-","chr1:197272640|197273269:-_chr1:197273387|197273521:-_chr1:197275020|197275097:-","UN_CRB1_LS0003","CRB1","protein coding gene","no",3.71,0,0,0.005,45,0,0,"0(0)","KICH","no","TE_intersect_:197273025|chr1|197273025|197274867|L1MC3:L1:LINE|190|-","TE_intersect_:197273025|chr1|197273025|197274867|L1MC3:L1:LINE|190|-","intron_intersect_chr1:197268482|197328422","intron_intersect_chr1:197268482|197328422"]
["chr1:197273521|197275020:-","chr1:197272640|197273269:-_chr1:197273387|197273521:-_chr1:197275020|197275097:-","UN_CRB1_LS0004","CRB1","protein coding gene","no",3.85,0,0,0.003,28,0,0,"0(0)","KICH","no","TE_intersect_:197274867|chr1|197274867|197275307|MLT1C:ERVL-MaLR:LTR|198|-","TE_intersect_:197273025|chr1|197273025|197274867|L1MC3:L1:LINE|190|-","intron_intersect_chr1:197268482|197328422","intron_intersect_chr1:197268482|197328422"]
["chr1:197442292|197442489:+","chr1:197442170|197442292:+_chr1:197442489|197442534:+_chr1:197477664|197478454:+","UN_CRB1_LS0015","CRB1","protein coding gene","no",4.07,0,0,0.012,114,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr1:197438547|197444819","exon_intersect_chr1:197438547|197444819"]
["chr1:197443107|197477664:+","chr1:197438506|197438675:+_chr1:197442166|197442534:+_chr1:197443011|197443107:+_chr1:197477664|197478523:+","UN_CRB1_LS0019","CRB1","protein coding gene","no",12.49,0,0,0.002,20,0,0,"0(0)","MESO","no","TE_intersect_:197442842|chr1|197442842|197443147|AluSx:Alu:SINE|141|+","NA","exon_intersect_chr1:197438547|197444819","exon_intersect_chr1:197477548|197478455"]
["chr1:197512953|197535720:-","chr1:197504748|197510972:-_chr1:197511728|197511944:-_chr1:197512871|197512953:-_chr1:197535720|197535771:-","UN_DENND1B_LS0006","DENND1B","protein coding gene","no",1.3,0,0,0.004,38,0,0,"0(0)","ESCA","no","TE_intersect_:197535678|chr1|197535678|197536050|MLT1O:ERVL-MaLR:LTR|348|+","NA","intron_intersect_chr1:197512953|197539964","intron_intersect_chr1:197512953|197539964"]
["chr1:197652315|197672037:-","chr1:197504751|197510972:-_chr1:197511728|197511944:-_chr1:197512871|197512953:-_chr1:197539964|197540071:-_chr1:197540959|197541015:-_chr1:197545922|197545990:-_chr1:197546733|197546773:-_chr1:197553022|197553112:-_chr1:197583152|197583253:-_chr1:197595208|197595333:-_chr1:197607073|197607174:-_chr1:197611931|197611976:-_chr1:197617659|197617759:-_chr1:197642711|197642821:-_chr1:197645690|197645743:-_chr1:197652235|197652315:-_chr1:197672037|197672156:-_chr1:197674120|197674169:-_chr1:197715031|197715074:-_chr1:197772868|197772932:-_chr1:197775139|197775325:-","UN_DENND1B_LS0023","DENND1B","protein coding gene","no",2.78,0,0,0.005,50,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:197672037|197672156","intron_intersect_chr1:197652315|197658300"]
["chr1:197661072|197686770:+","chr1:197660608|197661072:+_chr1:197686770|197687504:+","UN_DENND1B_LS0024","DENND1B","protein coding gene","no",2.3,0.09,0,0.016,149,0.001,1,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:197658369|197672037","intron_intersect_chr1:197685740|197688760"]
["chr1:197959217|197997620:+","chr1:197959073|197959217:+_chr1:197997620|197997749:+_chr1:198000171|198000948:+","UN_NEK7_UP_LS0003","NEK7","protein coding gene","no",1.03,0,0,0.006,57,0,0,"0(0)","CHOL;KICH;KIRP","no","NA","NA","NA","NA"]
["chr1:197994248|197995694:-","chr1:197994090|197994248:-_chr1:197995694|197995771:-","UN_DENND1B_UP_LS0002","DENND1B","protein coding gene","no",5.42,0,0,0.001,13,0,0,"0(0)","CHOL","no","TE_intersect_:197995620|chr1|197995620|197995969|THE1A:ERVL-MaLR:LTR|92|-","TE_intersect_:197994095|chr1|197994095|197994488|MLT2B1:ERVL:LTR|228|-","NA","NA"]
["chr1:197997749|198000171:+","chr1:197959073|197959217:+_chr1:197997620|197997749:+_chr1:198000171|198000948:+","UN_NEK7_UP_LS0008","NEK7","protein coding gene","no",3.02,0,0,0.007,69,0,0,"0(0)","CHOL;KIRP;LIHC","no","NA","TE_intersect_:198000000|chr1|198000000|198000314|MLT2B1:ERVL:LTR|205|-","NA","NA"]
["chr1:198023942|198035047:+","chr1:198023813|198023942:+_chr1:198035047|198035204:+_chr1:198037147|198037334:+_chr1:198041612|198041669:+_chr1:198048735|198049275:+","UN_NEK7_UP_LS0010","NEK7","protein coding gene","no",2.39,0,0,0.004,41,0,0,"0(0)","KICH;KIRP","no","TE_intersect_:198023779|chr1|198023779|198024038|AluSz:Alu:SINE|120|-","TE_intersect_:198034650|chr1|198034650|198035056|LTR7:ERV1:LTR|94|+","NA","NA"]
["chr1:198041669|198044352:+","chr1:197958629|197959217:+_chr1:198035047|198035204:+_chr1:198037147|198037334:+_chr1:198041612|198041669:+_chr1:198044352|198045471:+","UN_NEK7_UP_LS0017","NEK7","protein coding gene","no",2.59,0,0,0.007,69,0,0,"0(0)","CHOL;KICH;KIRP","no","TE_intersect_:198040991|chr1|198040991|198042085|L2a:L2:LINE|269|-","TE_intersect_:198044134|chr1|198044134|198044450|MER58B:hAT-Charlie:DNA|237|+","NA","NA"]
["chr1:198041669|198151628:+","chr1:197959159|197959217:+_chr1:198035047|198035204:+_chr1:198037147|198037334:+_chr1:198041612|198041669:+_chr1:198151628|198151731:+","UN_NEK7_UP_LS0021","NEK7","protein coding gene","no",2.98,0,0,0.006,59,0,0,"0(0)","KICH;KIRP","no","TE_intersect_:198040991|chr1|198040991|198042085|L2a:L2:LINE|269|-","NA","NA","NA"]
["chr1:198171059|198171855:-","chr1:198170829|198171059:-_chr1:198171855|198172093:-_chr1:198203388|198203577:-","UN_NEK7_LS0007","NEK7","protein coding gene","no",2.31,0,0,0.005,46,0,0,"0(0)","SKCM","no","TE_intersect_:198171743|chr1|198171743|198172091|L2c:L2:LINE|311|+","TE_intersect_:198170936|chr1|198170936|198171065|FLAM_C:Alu:SINE|194|-","intron_intersect_chr1:198157276|198197779","intron_intersect_chr1:198157276|198197779"]
["chr1:198172093|198203388:-","chr1:198170829|198171059:-_chr1:198171855|198172093:-_chr1:198203388|198203577:-","UN_NEK7_LS0008","NEK7","protein coding gene","no",2.42,0,0,0.008,73,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:198198186|198206874","intron_intersect_chr1:198157276|198197779"]
["chr1:198264235|198278954:+","chr1:198156963|198157276:+_chr1:198232553|198232637:+_chr1:198253040|198253180:+_chr1:198262575|198262637:+_chr1:198264125|198264235:+_chr1:198278954|198279061:+_chr1:198290286|198290358:+_chr1:198292945|198293039:+_chr1:198297127|198297240:+_chr1:198319412|198322420:+","UN_NEK7_LS0020","NEK7","protein coding gene","no",3.19,0,0,0.002,17,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:198264235|198277704","exon_intersect_chr1:198278954|198279061"]
["chr1:198315231|198319412:+","chr1:198314927|198315231:+_chr1:198319412|198322420:+","UN_NEK7_LS0033","NEK7","protein coding gene","no",3.81,0,0,0.007,66,0,0,"0(0)","LUSC","no","TE_intersect_:198309446|chr1|198309446|198315462|L1PA3:L1:LINE|33|-","NA","intron_intersect_chr1:198297240|198319412","exon_intersect_chr1:198319412|198322420"]
["chr1:198452755|198517168:-","chr1:198449149|198452755:-_chr1:198517168|198518255:-","UN_PRR13P1_UP_LS0001","PRR13P1","pseudogene","no",1.95,0,0,0.001,12,0,0,"0(0)","THYM","no","TE_intersect_:198517103|chr1|198517103|198517521|MLT2A1:ERVL:LTR|84|-","NA","NA","NA"]
["chr1:198452755|198519551:-","chr1:198450654|198452755:-_chr1:198519551|198519745:-","UN_PRR13P1_UP_LS0002","PRR13P1","pseudogene","no",3.06,0,0,0.003,28,0,0,"0(0)","THYM","no","TE_intersect_:198519227|chr1|198519227|198519984|L2:L2:LINE|312|+","NA","NA","NA"]
["chr1:198480345|198517168:-","chr1:198478893|198480345:-_chr1:198517168|198518184:-","UN_PRR13P1_UP_LS0005","PRR13P1","pseudogene","no",32.72,0,0,0.006,54,0,0,"0(0)","MESO;THYM","no","TE_intersect_:198517103|chr1|198517103|198517521|MLT2A1:ERVL:LTR|84|-","TE_intersect_:198480335|chr1|198480335|198480462|MIRc:MIR:SINE|266|+","NA","NA"]
["chr1:198517363|198519551:-","chr1:198478805|198480345:-_chr1:198517168|198517363:-_chr1:198519551|198519800:-","UN_PRR13P1_UP_LS0009","PRR13P1","pseudogene","no",1.8,0,0,0.003,24,0,0,"0(0)","THYM","no","TE_intersect_:198519227|chr1|198519227|198519984|L2:L2:LINE|312|+","TE_intersect_:198517103|chr1|198517103|198517521|MLT2A1:ERVL:LTR|84|-","NA","NA"]
["chr1:198529181|198529474:-","chr1:198523133|198523564:-_chr1:198529081|198529181:-_chr1:198529474|198529562:-","UN_ATP6V1G3_LS0001","ATP6V1G3","protein coding gene","no",2.12,0,0,0.003,33,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:198529181|198536679","intron_intersect_chr1:198529181|198536679"]
["chr1:198897070|198897142:-","chr1:198859549|198897070:-_chr1:198897142|198900569:-_chr1:198937226|198937410:-","UN_MIR181A1HG_LS0003","MIR181A1HG","lncRNA gene","no",10.09,0,0,0.004,42,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:198859153|198898466","intron_intersect_chr1:198859153|198898466"]
["chr1:198898624|198900411:-","chr1:198861373|198898624:-_chr1:198900411|198900569:-_chr1:198937226|198937416:-","UN_MIR181A1HG_LS0004","MIR181A1HG","lncRNA gene","no",3,0,0,0.002,16,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:198898466|198900569","exon_intersect_chr1:198898466|198900569"]
["chr1:198900569|198906541:-","chr1:198844714|198900569:-_chr1:198906541|198928682:-","UN_MIR181A1HG_LS0005","MIR181A1HG","lncRNA gene","no",9.02,0,0,0.002,21,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:198900569|198937226","intron_intersect_chr1:198900569|198937226"]
["chr1:198906741|198937226:-","chr1:198902250|198906741:-_chr1:198937226|198937410:-","UN_MIR181A1HG_LS0006","MIR181A1HG","lncRNA gene","no",11.21,0,0,0.002,17,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:198937226|198937429","intron_intersect_chr1:198900569|198937226"]
["chr1:199008568|199010612:-","chr1:199005587|199007429:-_chr1:199008394|199008568:-_chr1:199010612|199010633:-","UN_LINC01222_LS0001","LINC01222","lncRNA gene","no",2.11,0,0,0.001,11,0,0,"0(0)","THYM","no","TE_intersect_:199010496|chr1|199010496|199010735|MIR:MIR:SINE|243|-","NA","intron_intersect_chr1:199008568|199016133","intron_intersect_chr1:199008568|199016133"]
["chr1:199057731|199076524:+","chr1:199057614|199057731:+_chr1:199076524|199076778:+","UN_LINC01221_LS0002","LINC01221","lncRNA gene","no",8.29,0,0,0.008,77,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:199041672|199076524","exon_intersect_chr1:199076524|199076735"]
["chr1:19980442|19981401:-","chr1:19975433|19975843:-_chr1:19978015|19978121:-_chr1:19978380|19978524:-_chr1:19978734|19978879:-_chr1:19979580|19979659:-_chr1:19980362|19980442:-_chr1:19981401|19981595:-","UN_PLA2G2A_UP_LS0002","PLA2G2A","protein coding gene","yes",1.15,0,0,0.003,25,0,0,"0(0)","STAD","no","TE_intersect_:19980975|chr1|19980975|19981429|MLT1C:ERVL-MaLR:LTR|171|+","TE_intersect_:19980243|chr1|19980243|19980514|MamGyp-int:Gypsy:LTR|385|-","NA","NA"]
["chr1:199932335|199947567:-","chr1:199931858|199932335:-_chr1:199947567|199947684:-_chr1:199959255|199959327:-_chr1:199959449|199959989:-","UN_LINC01222_UP_LS0006","LINC01222","lncRNA gene","no",2,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:199947406|chr1|199947406|199947716|AluSx4:Alu:SINE|100|+","TE_intersect_:199932022|chr1|199932022|199932413|MLT1A1:ERVL-MaLR:LTR|188|+","NA","NA"]
["chr1:199947684|199959255:-","chr1:199765590|199765914:-_chr1:199947567|199947684:-_chr1:199959255|199959327:-_chr1:199959449|199959645:-","UN_LINC01222_UP_LS0008","LINC01222","lncRNA gene","no",4.5,0,0,0.003,31,0,0,"0(0)","TGCT","no","NA","TE_intersect_:199947406|chr1|199947406|199947716|AluSx4:Alu:SINE|100|+","NA","NA"]
["chr1:199959327|199959449:-","chr1:199765590|199765914:-_chr1:199947567|199947684:-_chr1:199959255|199959327:-_chr1:199959449|199959645:-","UN_LINC01222_UP_LS0011","LINC01222","lncRNA gene","no",3.59,0,0,0.005,46,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:200108459|200109323:-","chr1:200107268|200107608:-_chr1:200108405|200108459:-_chr1:200109323|200109577:-_chr1:200278869|200278965:-","UN_NR5A2_LS0027","NR5A2","protein coding gene","no",4.95,0.12,0,0.004,35,0.001,1,"0(0)","DLBC","no","NA","TE_intersect_:200108436|chr1|200108436|200108479|MIR1_Amn:MIR:SINE|256|+","intron_intersect_chr1:200058424|200111202","intron_intersect_chr1:200058424|200111202"]
["chr1:200111321|200113478:+","chr1:200043810|200043892:+_chr1:200045443|200045584:+_chr1:200048172|200048818:+_chr1:200111202|200111321:+_chr1:200113478|200113559:+_chr1:200120808|200122266:+","UN_NR5A2_LS0028","NR5A2","protein coding gene","no",1.57,0,0,0.003,28,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:200111321|200120808","intron_intersect_chr1:200111321|200120808"]
["chr1:200243270|200243384:-","chr1:200241665|200243270:-_chr1:200243384|200243538:-","UN_AC096633.1_UP_LS0001","AC096633.1","pseudogene","no",1.51,0,0,0.005,52,0,0,"0(0)","LGG","no","NA","NA","NA","NA"]
["chr1:200294572|200297841:-","chr1:200293707|200294572:-_chr1:200297841|200298393:-","UN_LINC00862_LS0003","LINC00862","lncRNA gene","no",3.11,0,0,0.002,21,0,0,"0(0)","LIHC","no","TE_intersect_:200297712|chr1|200297712|200297863|MER104:TcMar-Tc2:DNA|285|-","NA","NA","NA"]
["chr1:200519944|200520512:-","chr1:200512668|200519944:-_chr1:200520512|200520629:-_chr1:200520799|200520920:-_chr1:200521806|200521908:-_chr1:200530944|200531076:-","UN_AL359834.1_UP_LS0003","AL359834.1","lncRNA gene","no",3.27,0,0,0.002,16,0,0,"0(0)","THYM","no","TE_intersect_:200520486|chr1|200520486|200520649|AluSz6:Alu:SINE|135|+","NA","NA","NA"]
["chr1:200521908|200530944:-","chr1:200512668|200519944:-_chr1:200520512|200520629:-_chr1:200520799|200520920:-_chr1:200521806|200521908:-_chr1:200530944|200531076:-","UN_AL359834.1_UP_LS0006","AL359834.1","lncRNA gene","no",2.73,0,0,0.002,15,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:20059692|20062266:+","chr1:20032605|20032765:+_chr1:20059632|20059692:+_chr1:20062266|20063920:+_chr1:20068873|20069032:+_chr1:20070294|20070465:+_chr1:20084821|20084870:+_chr1:20086083|20086227:+_chr1:20089789|20089895:+_chr1:20090568|20091158:+","UN_PLA2G5_LS0008","PLA2G5","protein coding gene","no",1.76,0,0,0.005,51,0,0,"0(0)","PRAD","no","TE_intersect_:20059577|chr1|20059577|20059762|LTR67B:ERVL:LTR|271|+","TE_intersect_:20062249|chr1|20062249|20062305|L2c:L2:LINE|321|+","intron_intersect_chr1:20059692|20063484","intron_intersect_chr1:20059692|20063484"]
["chr1:200618179|200618552:-","chr1:200608469|200608928:-_chr1:200615355|200615609:-_chr1:200617612|200618179:-_chr1:200618552|200620733:-","UN_KIF14_LS0024","KIF14","protein coding gene","yes",1.44,0,0,0.005,45,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:200617612|200618838","exon_intersect_chr1:200617612|200618838"]
["chr1:200618467|200618552:-","chr1:200551499|200553767:-_chr1:200554468|200554606:-_chr1:200555380|200555454:-_chr1:200559330|200559452:-_chr1:200560722|200560880:-_chr1:200565069|200565253:-_chr1:200565445|200565669:-_chr1:200569911|200570005:-_chr1:200575591|200575691:-_chr1:200580254|200580383:-_chr1:200581201|200581294:-_chr1:200586101|200586227:-_chr1:200589217|200589369:-_chr1:200590125|200590272:-_chr1:200592080|200592240:-_chr1:200593667|200593769:-_chr1:200598237|200598421:-_chr1:200600050|200600113:-_chr1:200600356|200600503:-_chr1:200601896|200602068:-_chr1:200603226|200603341:-_chr1:200603839|200603955:-_chr1:200605283|200605390:-_chr1:200605864|200605894:-_chr1:200606746|200606798:-_chr1:200608830|200608928:-_chr1:200614318|200614405:-_chr1:200615355|200615609:-_chr1:200617612|200618467:-_chr1:200618552|200618846:-","UN_KIF14_LS0028","KIF14","protein coding gene","yes",1.19,0,0,0.008,81,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr1:200617612|200618838","exon_intersect_chr1:200617612|200618838"]
["chr1:200618838|200619552:-","chr1:200551497|200553767:-_chr1:200554468|200554606:-_chr1:200555380|200555454:-_chr1:200559330|200559452:-_chr1:200560722|200560880:-_chr1:200565069|200565253:-_chr1:200565445|200565669:-_chr1:200569911|200570005:-_chr1:200575591|200575691:-_chr1:200580254|200580383:-_chr1:200581201|200581294:-_chr1:200586101|200586227:-_chr1:200589217|200589369:-_chr1:200590125|200590272:-_chr1:200592080|200592240:-_chr1:200593667|200593769:-_chr1:200598237|200598421:-_chr1:200600050|200600113:-_chr1:200600356|200600503:-_chr1:200601896|200602068:-_chr1:200603226|200603341:-_chr1:200603839|200603955:-_chr1:200605283|200605390:-_chr1:200605864|200605894:-_chr1:200606746|200606798:-_chr1:200608830|200608928:-_chr1:200614318|200614405:-_chr1:200615355|200615609:-_chr1:200617612|200618838:-_chr1:200619552|200619674:-_chr1:200620411|200620737:-","UN_KIF14_LS0034","KIF14","protein coding gene","yes",1.28,0,0,0.012,113,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:200619363|chr1|200619363|200619650|AluSc:Alu:SINE|80|-","NA","intron_intersect_chr1:200618838|200620411","intron_intersect_chr1:200618838|200620411"]
["chr1:200619674|200620411:-","chr1:200551500|200553767:-_chr1:200554468|200554606:-_chr1:200555380|200555454:-_chr1:200559330|200559452:-_chr1:200560722|200560880:-_chr1:200565069|200565253:-_chr1:200565445|200565669:-_chr1:200569911|200570005:-_chr1:200575591|200575691:-_chr1:200580254|200580383:-_chr1:200581201|200581294:-_chr1:200586101|200586227:-_chr1:200589217|200589369:-_chr1:200590125|200590272:-_chr1:200592080|200592240:-_chr1:200593667|200593769:-_chr1:200598237|200598421:-_chr1:200600050|200600113:-_chr1:200600356|200600503:-_chr1:200601896|200602068:-_chr1:200603226|200603341:-_chr1:200603839|200603955:-_chr1:200605283|200605390:-_chr1:200605864|200605894:-_chr1:200606746|200606798:-_chr1:200608830|200608928:-_chr1:200614318|200614405:-_chr1:200615355|200615609:-_chr1:200617612|200619674:-_chr1:200620411|200620734:-","UN_KIF14_LS0036","KIF14","protein coding gene","yes",1.25,0,0,0.015,145,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr1:200620411|200620734","intron_intersect_chr1:200618838|200620411"]
["chr1:200666751|200666846:-","chr1:200644121|200644517:-_chr1:200648439|200648567:-_chr1:200649074|200649226:-_chr1:200650425|200650676:-_chr1:200659027|200659116:-_chr1:200663919|200664086:-_chr1:200665937|200666751:-_chr1:200666846|200666892:-","UN_DDX59_LS0016","DDX59","protein coding gene","no",2.16,0,0,0.008,79,0,0,"0(0)","ESCA;GBM;OV","no","TE_intersect_:200666830|chr1|200666830|200667112|AluSz:Alu:SINE|99|+","NA","intron_intersect_chr1:200666751|200669507","intron_intersect_chr1:200666751|200669507"]
["chr1:200667628|200669767:-","chr1:200644121|200644517:-_chr1:200648439|200648567:-_chr1:200649074|200649226:-_chr1:200650425|200650676:-_chr1:200659027|200659116:-_chr1:200663919|200664086:-_chr1:200665937|200666751:-_chr1:200667361|200667628:-_chr1:200669767|200669969:-","UN_DDX59_LS0024","DDX59","protein coding gene","no",0.88,0,0,0.004,34,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:200669767|200669969","intron_intersect_chr1:200666751|200669507"]
["chr1:200669886|200690309:+","chr1:200669851|200669886:+_chr1:200690309|200690430:+_chr1:200693753|200694250:+","UN_AL445483.1_LS0009","AL445483.1","lncRNA gene","no",2.88,0,0,0.011,109,0,0,"0(0)","GBM;OV","no","NA","TE_intersect_:200690284|chr1|200690284|200690586|AluSx:Alu:SINE|109|-","exon_intersect_chr1:200669767|200669969","exon_intersect_chr1:200690309|200690430"]
["chr1:200690430|200692705:+","chr1:200690307|200690430:+_chr1:200692705|200692788:+_chr1:200693753|200694250:+","UN_AL445483.1_LS0017","AL445483.1","lncRNA gene","no",1.96,0,0,0.007,70,0,0,"0(0)","OV","no","TE_intersect_:200690284|chr1|200690284|200690586|AluSx:Alu:SINE|109|-","TE_intersect_:200692682|chr1|200692682|200693012|MER44A:TcMar-Tigger:DNA|213|+","intron_intersect_chr1:200690430|200693753","intron_intersect_chr1:200690430|200693753"]
["chr1:200692788|200693694:+","chr1:200692701|200692788:+_chr1:200693694|200694250:+","UN_AL445483.1_LS0020","AL445483.1","lncRNA gene","no",2.61,0,0,0.018,175,0,0,"0(0)","OV;THYM","no","TE_intersect_:200692682|chr1|200692682|200693012|MER44A:TcMar-Tigger:DNA|213|+","NA","intron_intersect_chr1:200690430|200693753","intron_intersect_chr1:200690430|200693753"]
["chr1:200908774|200911519:-","chr1:200908570|200908774:-_chr1:200911519|200911679:-","UN_INAVA_LS0025","INAVA","protein coding gene","no",0.87,0,0,0.003,26,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:200911453|200912137","exon_intersect_chr1:200908730|200908940"]
["chr1:200913434|200913537:+","chr1:200894817|200895087:+_chr1:200898392|200898455:+_chr1:200899473|200899597:+_chr1:200900104|200900220:+_chr1:200900937|200901159:+_chr1:200907834|200907887:+_chr1:200908730|200908940:+_chr1:200909227|200909397:+_chr1:200911453|200912137:+_chr1:200913023|200913434:+_chr1:200913537|200915742:+","UN_INAVA_LS0042","INAVA","protein coding gene","no",2.94,0,0,0.009,86,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr1:200912137|200913537","exon_intersect_chr1:200913537|200915735"]
["chr1:201002350|201003079:-","chr1:200969390|200974194:-_chr1:200974714|200974913:-_chr1:200975499|200975669:-_chr1:200976776|200976893:-_chr1:200977212|200977698:-_chr1:200979535|200979715:-_chr1:200980960|200981096:-_chr1:200984859|200984972:-_chr1:200986844|200986918:-_chr1:200986996|200987201:-_chr1:200988296|200988353:-_chr1:200988493|200988544:-_chr1:200988766|200988931:-_chr1:200989942|200990043:-_chr1:200990138|200990332:-_chr1:200990576|200990723:-_chr1:200990917|200991149:-_chr1:200991657|200991725:-_chr1:200992282|200992389:-_chr1:200996196|200996395:-_chr1:200998384|200998575:-_chr1:200999349|200999466:-_chr1:200999883|200999964:-_chr1:201000390|201000608:-_chr1:201000717|201000780:-_chr1:201002161|201002350:-_chr1:201003079|201003242:-_chr1:201003586|201003781:-_chr1:201004340|201004455:-_chr1:201004766|201004933:-_chr1:201005308|201005442:-_chr1:201005545|201005694:-_chr1:201008769|201008951:-_chr1:201009266|201009488:-_chr1:201023343|201023408:-","UN_KIF21B_LS0023","KIF21B","protein coding gene","no",1,0.02,0,0.011,109,0.001,1,"0(0)","LAML","no","TE_intersect_:201002965|chr1|201002965|201003199|L2c:L2:LINE|339|+","NA","exon_intersect_chr1:201001407|201003781","exon_intersect_chr1:201001407|201003781"]
["chr1:201003242|201003586:-","chr1:200969390|200974194:-_chr1:200974714|200974913:-_chr1:200975499|200975669:-_chr1:200976776|200976893:-_chr1:200977212|200977698:-_chr1:200979535|200979715:-_chr1:200980960|200981096:-_chr1:200984859|200984972:-_chr1:200986844|200986918:-_chr1:200986996|200987201:-_chr1:200988296|200988353:-_chr1:200988493|200988544:-_chr1:200988766|200988931:-_chr1:200989942|200990043:-_chr1:200990138|200990332:-_chr1:200990576|200990723:-_chr1:200990917|200991149:-_chr1:200991657|200991725:-_chr1:200992282|200992389:-_chr1:200996196|200996395:-_chr1:200998384|200998575:-_chr1:200999349|200999466:-_chr1:200999883|200999964:-_chr1:201000390|201000608:-_chr1:201000717|201000780:-_chr1:201002161|201002350:-_chr1:201003079|201003242:-_chr1:201003586|201003781:-_chr1:201004340|201004455:-_chr1:201004766|201004933:-_chr1:201005308|201005442:-_chr1:201005545|201005694:-_chr1:201008769|201008951:-_chr1:201009266|201009488:-_chr1:201023343|201023408:-","UN_KIF21B_LS0024","KIF21B","protein coding gene","no",0.92,0,0,0.01,97,0,0,"0(0)","ESCA;LAML;STAD","no","NA","NA","exon_intersect_chr1:201001407|201003781","exon_intersect_chr1:201001407|201003781"]
["chr1:201011034|201023343:-","chr1:200969386|200973578:-_chr1:200974714|200974913:-_chr1:200975499|200975669:-_chr1:200976776|200976893:-_chr1:200977212|200977376:-_chr1:200979535|200979715:-_chr1:200980960|200981096:-_chr1:200983056|200983094:-_chr1:200984859|200984972:-_chr1:200986844|200986918:-_chr1:200986996|200987201:-_chr1:200988296|200988353:-_chr1:200988493|200988544:-_chr1:200988766|200988931:-_chr1:200989942|200990043:-_chr1:200990138|200990332:-_chr1:200990576|200990719:-_chr1:200990917|200991149:-_chr1:200991657|200991725:-_chr1:200992282|200992389:-_chr1:200996196|200996395:-_chr1:200998384|200998575:-_chr1:200999349|200999964:-_chr1:201000390|201000608:-_chr1:201000717|201000780:-_chr1:201002161|201002350:-_chr1:201003079|201003781:-_chr1:201004340|201004455:-_chr1:201004766|201004933:-_chr1:201005308|201005442:-_chr1:201005545|201005694:-_chr1:201008769|201008951:-_chr1:201009266|201009488:-_chr1:201010958|201011034:-_chr1:201023343|201023408:-","UN_KIF21B_LS0037","KIF21B","protein coding gene","no",0.44,0,0,0.004,34,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:201023343|201023700","intron_intersect_chr1:201009488|201023343"]
["chr1:201098802|201102459:+","chr1:201095744|201095882:+_chr1:201098542|201098802:+_chr1:201102459|201102644:+_chr1:201103623|201104229:+","UN_CACNA1S_LS0010","CACNA1S","protein coding gene","no",4.43,0,0,0.007,68,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:201094021|201110164","intron_intersect_chr1:201094021|201110164"]
["chr1:201102644|201103623:+","chr1:201095744|201095882:+_chr1:201098542|201098802:+_chr1:201102459|201102644:+_chr1:201103623|201104229:+","UN_CACNA1S_LS0011","CACNA1S","protein coding gene","no",2.94,0,0,0.017,161,0,0,"0(0)","GBM;LGG","no","TE_intersect_:201102589|chr1|201102589|201102793|MIR:MIR:SINE|245|-","NA","intron_intersect_chr1:201094021|201110164","intron_intersect_chr1:201094021|201110164"]
["chr1:201136067|201143820:-","chr1:201134772|201136067:-_chr1:201143820|201143951:-_chr1:201146740|201146848:-_chr1:201151761|201151852:-_chr1:201153858|201153959:-_chr1:201171490|201171619:-","UN_TMEM9_LS0021","TMEM9","protein coding gene","no",12.68,0.08,0,0.005,46,0.001,1,"0(0)","UCS","no","NA","NA","exon_intersect_chr1:201143820|201145668","intron_intersect_chr1:201135815|201143820"]
["chr1:201192896|201193247:+","chr1:201192699|201192896:+_chr1:201193247|201193300:+_chr1:201194154|201194273:+_chr1:201195839|201195978:+_chr1:201197218|201197317:+_chr1:201199334|201199378:+_chr1:201199609|201199654:+_chr1:201200237|201200411:+_chr1:201201719|201201832:+_chr1:201203738|201203906:+_chr1:201205082|201205354:+_chr1:201206083|201209622:+_chr1:201209839|201210342:+_chr1:201210559|201210918:+_chr1:201211027|201213621:+_chr1:201214177|201214301:+_chr1:201215013|201215154:+_chr1:201215539|201216753:+_chr1:201217287|201217460:+_chr1:201218530|201218658:+_chr1:201221444|201221746:+_chr1:201222739|201222827:+_chr1:201224679|201224874:+_chr1:201225824|201226123:+_chr1:201226882|201227208:+_chr1:201228386|201228952:+","UN_IGFN1_LS0002","IGFN1","protein coding gene","no",3.34,0,0,0.007,65,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:201190907|201193247","exon_intersect_chr1:201193247|201193300"]
["chr1:201292295|201293942:+","chr1:201292244|201292295:+_chr1:201293942|201294045:+_chr1:201313166|201313560:+_chr1:201316553|201316697:+_chr1:201317572|201317779:+_chr1:201318618|201318795:+_chr1:201320267|201320381:+_chr1:201321978|201322133:+_chr1:201323013|201323189:+_chr1:201324428|201324581:+_chr1:201324941|201325127:+_chr1:201325754|201325838:+_chr1:201328762|201328868:+_chr1:201330074|201332961:+","UN_PKP1_LS0010","PKP1","protein coding gene","no",1.73,0,0,0.004,34,0,0,"0(0)","COAD","no","TE_intersect_:201292250|chr1|201292250|201292429|MIR3:MIR:SINE|318|-","NA","intron_intersect_chr1:201283904|201293942","exon_intersect_chr1:201293942|201294045"]
["chr1:201331814|201331927:-","chr1:201330936|201331140:-_chr1:201331515|201331814:-_chr1:201331927|201332144:-","UN_PKP1_LS0049","PKP1","protein coding gene","no",5.18,0,0,0.002,16,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:201330074|201332993","exon_intersect_chr1:201330074|201332993"]
["chr1:201332667|201332753:-","chr1:201332080|201332112:-_chr1:201332368|201332667:-_chr1:201332753|201332852:-","UN_PKP1_LS0076","PKP1","protein coding gene","no",15.12,0,0,0.002,16,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:201330074|201332993","exon_intersect_chr1:201330074|201332993"]
["chr1:201372041|201373214:-","chr1:201363356|201363406:-_chr1:201364298|201364375:-_chr1:201365191|201365307:-_chr1:201365610|201365670:-_chr1:201366838|201366871:-_chr1:201367771|201367806:-_chr1:201368162|201368227:-_chr1:201369816|201369845:-_chr1:201372027|201372041:-_chr1:201373214|201373254:-","UN_TNNT2_LS0010","TNNT2","protein coding gene","no",1.95,0,0,0.003,29,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:201373119|201375368","exon_intersect_chr1:201372027|201372155"]
["chr1:201381773|201382698:+","chr1:201381326|201381425:+_chr1:201381566|201381773:+_chr1:201382698|201382741:+","UN_LAD1_LS0068","LAD1","protein coding gene","no",5.07,0.02,0,0.004,36,0.001,1,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:201380838|201381893","exon_intersect_chr1:201382653|201382805"]
["chr1:201465772|201465877:+","chr1:201465492|201465772:+_chr1:201465877|201466147:+_chr1:201468363|201468557:+","UN_PHLDA3_LS0018","PHLDA3","protein coding gene","yes",2.55,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:201464383|201466178","exon_intersect_chr1:201464383|201466178"]
["chr1:20149271|20149366:-","chr1:20149164|20149271:-_chr1:20149366|20149737:-","UN_PLA2G2F_LS0009","PLA2G2F","protein coding gene","no",6.74,0,0,0.008,75,0,0,"0(0)","BLCA","no","NA","NA","exon_intersect_chr1:20148190|20150386","exon_intersect_chr1:20148190|20150386"]
["chr1:20149815|20149866:-","chr1:20149748|20149815:-_chr1:20149866|20150066:-","UN_PLA2G2F_LS0016","PLA2G2F","protein coding gene","no",14.25,0,0,0.005,44,0,0,"0(0)","BLCA","no","NA","NA","exon_intersect_chr1:20148190|20150386","exon_intersect_chr1:20148190|20150386"]
["chr1:201510001|201512978:-","chr1:201484725|201484789:-_chr1:201485283|201485376:-_chr1:201488855|201488984:-_chr1:201490176|201490344:-_chr1:201496192|201496304:-_chr1:201507070|201507412:-_chr1:201509697|201510001:-_chr1:201512978|201513060:-","UN_AC096677.1_LS0014","AC096677.1","lncRNA gene","no",2.74,0.02,0,0.009,91,0.001,1,"0(0)","THYM","no","TE_intersect_:201512968|chr1|201512968|201513070|L2c:L2:LINE|300|+","NA","intron_intersect_chr1:201509456|201518703","intron_intersect_chr1:201509456|201518703"]
["chr1:201563528|201583679:+","chr1:201563103|201563528:+_chr1:201583679|201586404:+","UN_RPS10P7_LS0003","RPS10P7","pseudogene","no",2.09,0,0,0.016,156,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr1:201719499|201719627:-","chr1:201718754|201719499:-_chr1:201719627|201724915:-_chr1:201737320|201739320:-","UN_NAV1_LS0010","NAV1","protein coding gene","no",12.72,0,0,0.003,30,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:201719627|201723294","intron_intersect_chr1:201718755|201719508"]
["chr1:201724915|201749776:-","chr1:201722106|201724915:-_chr1:201749776|201749897:-_chr1:201751989|201752104:-","UN_NAV1_LS0015","NAV1","protein coding gene","no",1.95,0,0,0.004,43,0,0,"0(0)","OV","no","TE_intersect_:201749698|chr1|201749698|201749932|AluJb:Alu:SINE|175|+","NA","intron_intersect_chr1:201740076|201780421","intron_intersect_chr1:201724915|201733406"]
["chr1:201888520|201889445:+","chr1:201888468|201888520:+_chr1:201889445|201889616:+_chr1:201890316|201890587:+_chr1:201891401|201891568:+_chr1:201891800|201892137:+","UN_AL513217.1_UP_LS0002","AL513217.1","lncRNA gene","no",1.46,0,0,0.002,19,0,0,"0(0)","UVM","no","NA","NA","NA","exon_intersect_chr1:201888680|201889616"]
["chr1:201895562|201896021:+","chr1:201888934|201889067:+_chr1:201889445|201889616:+_chr1:201890454|201890587:+_chr1:201891401|201891568:+_chr1:201891800|201892007:+_chr1:201892344|201892506:+_chr1:201893554|201893727:+_chr1:201893820|201893912:+_chr1:201895479|201895562:+_chr1:201896021|201896203:+_chr1:201896884|201897121:+_chr1:201898136|201898276:+_chr1:201899173|201899346:+_chr1:201899730|201899978:+","UN_AL513217.1_LS0004","AL513217.1","lncRNA gene","no",2.75,0,0,0.003,31,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:201893912|201896452","intron_intersect_chr1:201893912|201896452"]
["chr1:201895562|201896079:+","chr1:201888968|201889067:+_chr1:201889445|201889616:+_chr1:201890454|201890587:+_chr1:201891401|201891568:+_chr1:201891800|201892007:+_chr1:201892344|201892506:+_chr1:201893554|201893727:+_chr1:201893820|201893912:+_chr1:201895479|201895562:+_chr1:201896079|201896203:+_chr1:201896884|201897121:+_chr1:201898136|201898276:+_chr1:201899173|201899346:+_chr1:201899730|201899978:+","UN_AL513217.1_LS0006","AL513217.1","lncRNA gene","no",4.01,0,0,0.003,31,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:201893912|201896452","intron_intersect_chr1:201893912|201896452"]
["chr1:201896203|201896884:+","chr1:201888934|201889067:+_chr1:201889445|201889616:+_chr1:201890454|201890587:+_chr1:201891401|201891568:+_chr1:201891800|201892007:+_chr1:201892344|201892506:+_chr1:201893554|201893727:+_chr1:201893820|201893912:+_chr1:201895479|201895562:+_chr1:201896021|201896203:+_chr1:201896884|201897121:+_chr1:201898136|201898276:+_chr1:201899173|201899346:+_chr1:201899730|201899978:+","UN_AL513217.1_LS0008","AL513217.1","lncRNA gene","no",1.74,0,0,0.007,64,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:201893912|201896452","exon_intersect_chr1:201896452|201898398"]
["chr1:201897121|201898136:+","chr1:201888934|201889067:+_chr1:201889445|201889616:+_chr1:201890454|201890587:+_chr1:201891401|201891568:+_chr1:201891800|201892007:+_chr1:201892344|201892506:+_chr1:201893554|201893727:+_chr1:201893820|201893912:+_chr1:201895479|201895562:+_chr1:201896021|201896203:+_chr1:201896884|201897121:+_chr1:201898136|201898276:+_chr1:201899173|201899346:+_chr1:201899730|201899978:+","UN_LMOD1_LS0005","LMOD1","protein coding gene","no",1.24,0,0,0.006,62,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:201896452|201898398","exon_intersect_chr1:201896452|201898398"]
["chr1:201898997|201899730:+","chr1:201898526|201898997:+_chr1:201899730|201899979:+","UN_LMOD1_LS0026","LMOD1","protein coding gene","no",7.47,0,0,0.005,51,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr1:201898398|201899173","exon_intersect_chr1:201899237|201900751"]
["chr1:201900751|201905243:-","chr1:201899101|201900751:-_chr1:201905243|201905367:-","UN_LMOD1_LS0039","LMOD1","protein coding gene","no",2.5,0,0,0.003,27,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr1:201900751|201921644","intron_intersect_chr1:201900751|201921644"]
["chr1:20192728|20196696:-","chr1:20192695|20192728:-_chr1:20196696|20197123:-","UN_UBXN10-AS1_UP_LS0001","UBXN10-AS1","lncRNA gene","no",1.01,0,0,0.001,11,0,0,"0(0)","KICH","no","TE_intersect_:20196484|chr1|20196484|20196794|AluSx3:Alu:SINE|142|-","NA","NA","exon_intersect_chr1:20190547|20196048"]
["chr1:202012694|202015724:-","chr1:202012529|202012694:-_chr1:202015724|202015892:-","UN_ELF3_LS0053","ELF3","protein coding gene","no",1.65,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:202014886|202017188","exon_intersect_chr1:202011957|202012759"]
["chr1:202012732|202015724:-","chr1:202012033|202012111:-_chr1:202012651|202012732:-_chr1:202015724|202015899:-","UN_ELF3_LS0062","ELF3","protein coding gene","no",3.54,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:202014886|202017188","exon_intersect_chr1:202011957|202012759"]
["chr1:202015505|202015747:-","chr1:202015221|202015505:-_chr1:202015747|202015936:-","UN_ELF3_LS0160","ELF3","protein coding gene","no",13.94,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:202014886|202017188","exon_intersect_chr1:202014886|202017188"]
["chr1:202015629|202015747:-","chr1:202015361|202015629:-_chr1:202015747|202015858:-","UN_ELF3_LS0184","ELF3","protein coding gene","no",5.69,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:202014886|202017188","exon_intersect_chr1:202014886|202017188"]
["chr1:202015633|202015747:-","chr1:202015406|202015633:-_chr1:202015747|202015888:-","UN_ELF3_LS0185","ELF3","protein coding gene","no",14.88,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:202014886|202017188","exon_intersect_chr1:202014886|202017188"]
["chr1:202015646|202015747:-","chr1:202015467|202015646:-_chr1:202015747|202015907:-","UN_ELF3_LS0188","ELF3","protein coding gene","no",12.37,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:202014886|202017188","exon_intersect_chr1:202014886|202017188"]
["chr1:202015723|202015791:-","chr1:202015150|202015376:-_chr1:202015514|202015723:-_chr1:202015791|202015890:-","UN_ELF3_LS0192","ELF3","protein coding gene","no",11.67,0,0,0.005,52,0,0,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chr1:202014886|202017188","exon_intersect_chr1:202014886|202017188"]
["chr1:20203369|20211849:-","chr1:20197790|20200457:-_chr1:20203184|20203369:-_chr1:20211849|20213191:-","UN_UBXN10-AS1_UP_LS0010","UBXN10-AS1","lncRNA gene","no",2.54,0,0,0.001,12,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr1:202109041|202119824:-","chr1:202108986|202109041:-_chr1:202119824|202119950:-_chr1:202128263|202128548:-_chr1:202128750|202129069:-_chr1:202129240|202129498:-","UN_ELF3-AS1_UP_LS0022","ELF3-AS1","lncRNA gene","no",2.31,0,0,0.003,26,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr1:202119950|202123444:-","chr1:202087767|202087964:-_chr1:202119824|202119950:-_chr1:202123444|202123733:-_chr1:202123951|202124312:-","UN_ELF3-AS1_UP_LS0024","ELF3-AS1","lncRNA gene","no",2.29,0,0,0.015,145,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:202119891|chr1|202119891|202120014|MIR3:MIR:SINE|317|+","exon_intersect_chr1:202122858|202123593","NA"]
["chr1:202123733|202123951:-","chr1:202087767|202087964:-_chr1:202119824|202119950:-_chr1:202123444|202123733:-_chr1:202123951|202124312:-","UN_GPR37L1_LS0002","GPR37L1","protein coding gene","no",3.59,0,0,0.015,144,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:202123593|202127741","intron_intersect_chr1:202123593|202127741"]
["chr1:202124058|202128263:-","chr1:202087544|202087964:-_chr1:202119824|202119950:-_chr1:202123444|202123733:-_chr1:202123951|202124058:-_chr1:202128263|202128485:-","UN_GPR37L1_LS0004","GPR37L1","protein coding gene","no",1.53,0,0,0.004,36,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:202127741|202133592","intron_intersect_chr1:202123593|202127741"]
["chr1:202128449|202130298:-","chr1:202087752|202087964:-_chr1:202119824|202119950:-_chr1:202123444|202123733:-_chr1:202123951|202124058:-_chr1:202128026|202128449:-_chr1:202130298|202130344:-","UN_GPR37L1_LS0011","GPR37L1","protein coding gene","no",1.12,0,0,0.002,21,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:202127741|202133592","exon_intersect_chr1:202127741|202133592"]
["chr1:202141448|202142099:-","chr1:202135202|202135220:-_chr1:202135459|202135526:-_chr1:202135707|202135800:-_chr1:202137965|202138038:-_chr1:202138368|202141448:-_chr1:202142099|202144741:-","UN_ARL8A_LS0037","ARL8A","protein coding gene","no",22.58,0,0,0.006,61,0,0,"0(0)","LAML","no","TE_intersect_:202141865|chr1|202141865|202142165|AluSq:Alu:SINE|90|-","TE_intersect_:202141359|chr1|202141359|202141672|AluSx:Alu:SINE|109|+","intron_intersect_chr1:202138448|202144450","intron_intersect_chr1:202138448|202144450"]
["chr1:202227726|202227900:-","chr1:202227154|202227726:-_chr1:202227900|202228005:-_chr1:202228665|202228806:-_chr1:202229884|202229989:-","UN_LGR6_LS0003","LGR6","protein coding gene","no",4.16,0,0,0.002,23,0,0,"0(0)","TGCT","no","NA","TE_intersect_:202227615|chr1|202227615|202227832|MIRb:MIR:SINE|280|+","intron_intersect_chr1:202225494|202227936","intron_intersect_chr1:202225494|202227936"]
["chr1:202235810|202235922:+","chr1:202235541|202235810:+_chr1:202235922|202235993:+_chr1:202276306|202276521:+_chr1:202280781|202280852:+_chr1:202297508|202297576:+_chr1:202300849|202300920:+_chr1:202301164|202301235:+_chr1:202303279|202303347:+_chr1:202304559|202304630:+_chr1:202305684|202305749:+_chr1:202306868|202306939:+_chr1:202307330|202307401:+_chr1:202309051|202309176:+_chr1:202310197|202310357:+_chr1:202314802|202314882:+_chr1:202317952|202319758:+","UN_LGR6_LS0007","LGR6","protein coding gene","no",3.06,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:202228007|202235922","exon_intersect_chr1:202235922|202236334"]
["chr1:20225557|20225681:+","chr1:20225131|20225557:+_chr1:20225681|20226621:+","UN_LINC01757_UP_LS0011","LINC01757","lncRNA gene","no",3.24,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:20228244|20236619:+","chr1:20228008|20228244:+_chr1:20236619|20236804:+_chr1:20244296|20244642:+","UN_LINC01757_UP_LS0012","LINC01757","lncRNA gene","no",16.54,0.68,0,0.007,66,0.001,1,"0(0)","KICH","no","TE_intersect_:20228074|chr1|20228074|20228305|MIR:MIR:SINE|281|-","TE_intersect_:20236300|chr1|20236300|20236808|MLT1K:ERVL-MaLR:LTR|322|+","NA","NA"]
["chr1:202333093|202333450:-","chr1:202333010|202333093:-_chr1:202333450|202333555:-_chr1:202334989|202335058:-_chr1:202335646|202335818:-","UBE2T_LS004","UBE2T","protein coding gene","no",13.99,0,0,0.011,106,0,0,"0(0)","GBM;LGG;PCPG","yes","NA","NA","exon_intersect_chr1:202333450|202333555","exon_intersect_chr1:202333010|202333335"]
["chr1:202428929|202431480:+","chr1:202348206|202349142:+_chr1:202416787|202416917:+_chr1:202422620|202422738:+_chr1:202425566|202425725:+_chr1:202427040|202427184:+_chr1:202428855|202428929:+_chr1:202431480|202431619:+_chr1:202434656|202434768:+_chr1:202437821|202438024:+_chr1:202440706|202440788:+_chr1:202442447|202442572:+_chr1:202443087|202443127:+_chr1:202445046|202445228:+_chr1:202448989|202449171:+_chr1:202488533|202488623:+_chr1:202493114|202493317:+_chr1:202495293|202495482:+_chr1:202495570|202495682:+_chr1:202496781|202496822:+_chr1:202562778|202562922:+_chr1:202564443|202564547:+_chr1:202567778|202567831:+_chr1:202569147|202569197:+_chr1:202580474|202588580:+","UN_PPP1R12B_LS0012","PPP1R12B","protein coding gene","no",7.18,0,0,0.004,39,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr1:202428929|202430731","exon_intersect_chr1:202431480|202431619"]
["chr1:202430794|202431480:+","chr1:202348728|202349142:+_chr1:202416787|202416917:+_chr1:202422620|202422738:+_chr1:202425329|202425385:+_chr1:202425566|202425725:+_chr1:202427040|202427184:+_chr1:202428855|202428929:+_chr1:202430731|202430794:+_chr1:202431480|202431619:+_chr1:202434656|202434768:+_chr1:202437821|202438024:+_chr1:202440706|202440788:+_chr1:202442447|202442572:+_chr1:202445046|202445228:+_chr1:202448989|202449171:+_chr1:202488533|202488623:+_chr1:202493114|202493317:+_chr1:202495293|202495482:+_chr1:202495570|202495682:+_chr1:202496781|202496822:+_chr1:202558877|202558893:+_chr1:202562778|202562922:+_chr1:202564443|202564547:+_chr1:202567778|202567831:+_chr1:202569147|202569197:+_chr1:202580474|202592035:+_chr1:202599035|202599208:+","UN_PPP1R12B_LS0015","PPP1R12B","protein coding gene","no",4.89,0,0,0.003,24,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:202430731|202430810","exon_intersect_chr1:202431480|202431619"]
["chr1:202473598|202473886:-","chr1:202465834|202473598:-_chr1:202473886|202473977:-_chr1:202478842|202478937:-_chr1:202516380|202516558:-","UN_PPP1R12B_LS0035","PPP1R12B","protein coding gene","no",8.48,0,0,0.002,21,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:202472117|202488533","intron_intersect_chr1:202472117|202488533"]
["chr1:202473977|202478842:-","chr1:202465834|202473598:-_chr1:202473886|202473977:-_chr1:202478842|202478937:-_chr1:202516380|202516558:-","UN_PPP1R12B_LS0038","PPP1R12B","protein coding gene","no",5.78,0,0,0.002,15,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:202472117|202488533","intron_intersect_chr1:202472117|202488533"]
["chr1:202478937|202516380:-","chr1:202465834|202473598:-_chr1:202473886|202473977:-_chr1:202478842|202478937:-_chr1:202516380|202516558:-","UN_PPP1R12B_LS0042","PPP1R12B","protein coding gene","no",5.12,0,0,0.002,22,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:202502909|202527310","intron_intersect_chr1:202472117|202488533"]
["chr1:202495804|202516380:-","chr1:202495617|202495804:-_chr1:202516380|202516558:-","UN_PPP1R12B_LS0047","PPP1R12B","protein coding gene","no",1.74,0,0,0.002,15,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:202502909|202527310","intron_intersect_chr1:202495682|202496781"]
["chr1:202603127|202604455:-","chr1:202590595|202596963:-_chr1:202599218|202599351:-_chr1:202600357|202600474:-_chr1:202601890|202602057:-_chr1:202602378|202602545:-_chr1:202602999|202603127:-_chr1:202604455|202604621:-_chr1:202605595|202605789:-_chr1:202710258|202710498:-","UN_SYT2_LS0015","SYT2","protein coding gene","no",4.41,0,0,0.053,512,0,0,"0(0)","KIRP;LUAD;LUSC;OV;PCPG;STAD;TGCT;THYM;UCS","no","NA","NA","exon_intersect_chr1:202604455|202604621","intron_intersect_chr1:202603118|202604268"]
["chr1:202644375|202644839:+","chr1:202644236|202644375:+_chr1:202644839|202645608:+","UN_SYT2_LS0026","SYT2","protein coding gene","no",2.53,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:202643453|202710258","intron_intersect_chr1:202643453|202710258"]
["chr1:202683734|202710258:-","chr1:202683219|202683734:-_chr1:202710258|202710417:-","UN_SYT2_LS0027","SYT2","protein coding gene","no",2.46,0,0,0.004,36,0,0,"0(0)","OV;TGCT","no","NA","TE_intersect_:202683458|chr1|202683458|202683757|AluJr:Alu:SINE|161|+","exon_intersect_chr1:202710258|202710417","intron_intersect_chr1:202643453|202710258"]
["chr1:202853280|202855344:-","chr1:202850238|202853280:-_chr1:202855344|202858164:-_chr1:202858882|202859102:-_chr1:202861448|202861608:-","UN_AC098934.1_LS0001","AC098934.1","pseudogene","no",2.16,0,0,0.008,81,0,0,"0(0)","ESCA","no","TE_intersect_:202855193|chr1|202855193|202855463|AluJb:Alu:SINE|174|+","NA","intron_intersect_chr1:202853280|202855552","intron_intersect_chr1:202853280|202855552"]
["chr1:203144026|203144690:-","chr1:203142671|203144026:-_chr1:203144690|203144891:-_chr1:203145037|203145074:-_chr1:203149966|203150052:-_chr1:203152550|203152669:-_chr1:203152883|203152967:-","UN_ADORA1_LS0010","ADORA1","protein coding gene","no",0.21,0,0,0.002,23,0,0,"0(0)","OV","no","TE_intersect_:203144580|chr1|203144580|203144754|MIRc:MIR:SINE|297|+","NA","intron_intersect_chr1:203129698|203144694","intron_intersect_chr1:203129698|203144694"]
["chr1:203178569|203179005:-","chr1:203176642|203178569:-_chr1:203179005|203179585:-_chr1:203179761|203179877:-_chr1:203180470|203180652:-_chr1:203181162|203181285:-_chr1:203182731|203182805:-","UN_MYBPH_UP_LS0002","MYBPH","protein coding gene","no",26.67,0.03,0,0.006,62,0.004,3,"0(0)","DLBC;GBM","no","NA","NA","exon_intersect_chr1:203178931|203180652","NA"]
["chr1:203179166|203179280:+","chr1:203178980|203179166:+_chr1:203179280|203179531:+_chr1:203179932|203180098:+","UN_CHI3L1_LS0008","CHI3L1","protein coding gene","no",4.05,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:203178931|203180652","exon_intersect_chr1:203178931|203180652"]
["chr1:203179295|203179362:+","chr1:203178976|203179295:+_chr1:203179362|203179576:+_chr1:203245761|203245775:+","UN_CHI3L1_LS0018","CHI3L1","protein coding gene","no",18.81,0,0,0.004,42,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:203178931|203180652","exon_intersect_chr1:203178931|203180652"]
["chr1:203179366|203179441:+","chr1:203179237|203179366:+_chr1:203179441|203179679:+","UN_CHI3L1_LS0035","CHI3L1","protein coding gene","no",13.9,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:203178931|203180652","exon_intersect_chr1:203178931|203180652"]
["chr1:203179374|203179399:+","chr1:203178996|203179374:+_chr1:203179399|203179590:+","UN_CHI3L1_LS0037","CHI3L1","protein coding gene","no",62.21,0.44,0,0.017,165,0.003,2,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:203178931|203180652","exon_intersect_chr1:203178931|203180652"]
["chr1:203179422|203179839:+","chr1:203178689|203179194:+_chr1:203179227|203179422:+_chr1:203179839|203179879:+","UN_CHI3L1_LS0041","CHI3L1","protein coding gene","no",0.94,0,0,0.006,62,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:203178931|203180652","exon_intersect_chr1:203178931|203180652"]
["chr1:203179478|203179822:+","chr1:203175835|203177142:+_chr1:203177201|203179144:+_chr1:203179167|203179302:+_chr1:203179327|203179478:+_chr1:203179822|203179981:+","UN_CHI3L1_LS0042","CHI3L1","protein coding gene","no",4.75,0,0,0.006,59,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:203178931|203180652","exon_intersect_chr1:203178931|203180652"]
["chr1:203179531|203179577:+","chr1:203179251|203179531:+_chr1:203179577|203179657:+","UN_CHI3L1_LS0045","CHI3L1","protein coding gene","no",7.63,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:203178931|203180652","exon_intersect_chr1:203178931|203180652"]
["chr1:203179576|203245761:+","chr1:203178976|203179295:+_chr1:203179362|203179576:+_chr1:203245761|203245775:+","UN_NPM1P40_UP_LS0006","NPM1P40","pseudogene","no",32.57,0,0,0.002,23,0,0,"0(0)","GBM","no","NA","TE_intersect_:203245621|chr1|203245621|203245935|MER66B:ERV1:LTR|118|-","exon_intersect_chr1:203178931|203180652","intron_intersect_chr1:203240658|203255743"]
["chr1:203185374|203186305:+","chr1:203182134|203185374:+_chr1:203186305|203186348:+","UN_CHI3L1_LS0066","CHI3L1","protein coding gene","no",4.19,0,0,0.002,19,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:203185184|203185385","intron_intersect_chr1:203185385|203186316"]
["chr1:203217778|203219216:-","chr1:203216670|203217133:-_chr1:203217739|203217778:-_chr1:203219216|203219329:-_chr1:203219664|203219849:-_chr1:203222202|203222310:-","CHIT1_LS007","CHIT1","protein coding gene","no",10,0,0,0.005,45,0,0,"0(0)","DLBC","yes","NA","NA","exon_intersect_chr1:203219216|203219329","exon_intersect_chr1:203217739|203218091"]
["chr1:203273711|203273960:-","chr1:203212835|203213045:-_chr1:203217739|203217865:-_chr1:203219216|203219329:-_chr1:203219664|203219849:-_chr1:203222202|203222325:-_chr1:203223135|203223259:-_chr1:203223495|203223660:-_chr1:203225048|203225104:-_chr1:203225669|203225870:-_chr1:203228533|203228562:-_chr1:203240463|203240520:-_chr1:203240627|203240658:-_chr1:203273376|203273711:-_chr1:203273960|203274104:-","UN_CHIT1_UP_LS0001","CHIT1","protein coding gene","no",3.1,0,0,0.002,15,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:203274282|203274759:+","chr1:203274157|203274282:+_chr1:203274759|203275250:+","UN_LINC01353_UP_LS0002","LINC01353","lncRNA gene","no",2.55,0,0,0.001,11,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:203304630|203305057:-","chr1:203300514|203300647:-_chr1:203301090|203301281:-_chr1:203304520|203304630:-_chr1:203305057|203305259:-","UN_LINC01136_LS0006","LINC01136","lncRNA gene","no",2.99,0,0,0.007,67,0,0,"0(0)","DLBC","no","TE_intersect_:203304935|chr1|203304935|203305169|L2c:L2:LINE|329|-","NA","exon_intersect_chr1:203304853|203305309","exon_intersect_chr1:203304520|203304705"]
["chr1:20345593|20346612:+","chr1:20340824|20342609:+_chr1:20343079|20343393:+_chr1:20345456|20345593:+_chr1:20346612|20346680:+_chr1:20348245|20348358:+_chr1:20349098|20349298:+_chr1:20350156|20350230:+_chr1:20350857|20350926:+_chr1:20352055|20352172:+_chr1:20353757|20359532:+","UN_VWA5B1_LS0019","VWA5B1","protein coding gene","no",2.82,0,0,0.003,33,0.003,2,"0(0)","KICH","no","NA","TE_intersect_:20346424|chr1|20346424|20346787|L1M5:L1:LINE|288|-","intron_intersect_chr1:20345593|20348245","intron_intersect_chr1:20345593|20348245"]
["chr1:20346680|20348245:+","chr1:20340824|20342609:+_chr1:20343079|20343393:+_chr1:20345456|20345593:+_chr1:20346612|20346680:+_chr1:20348245|20348358:+_chr1:20349098|20349298:+_chr1:20350156|20350230:+_chr1:20350857|20350926:+_chr1:20352055|20352172:+_chr1:20353757|20359532:+","UN_VWA5B1_LS0020","VWA5B1","protein coding gene","no",2.74,0,0,0.003,31,0.003,2,"0(0)","KICH","no","TE_intersect_:20346424|chr1|20346424|20346787|L1M5:L1:LINE|288|-","NA","intron_intersect_chr1:20345593|20348245","exon_intersect_chr1:20348245|20348376"]
["chr1:203483580|203483701:-","chr1:203482912|203483196:-_chr1:203483360|203483580:-_chr1:203483701|203483865:-_chr1:203483929|203484075:-_chr1:203486786|203486972:-_chr1:203488774|203488871:-","UN_PRELP_LS0025","PRELP","protein coding gene","no",5.71,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:203483169|203484157","exon_intersect_chr1:203483169|203484157"]
["chr1:203494217|203495965:+","chr1:203494143|203494217:+_chr1:203495965|203496236:+_chr1:203496977|203497115:+_chr1:203498681|203498839:+_chr1:203499649|203499851:+_chr1:203502914|203503009:+_chr1:203503550|203503745:+_chr1:203508646|203508864:+","OPTC_LS001","OPTC","protein coding gene","no",11.11,0,0.68,0.003,24,0,0,"0.014(249)","UVM","yes","NA","NA","intron_intersect_chr1:203494217|203495965","exon_intersect_chr1:203495965|203496236"]
["chr1:203496236|203496977:+","chr1:203494143|203494217:+_chr1:203495965|203496236:+_chr1:203496977|203497115:+_chr1:203498681|203498839:+_chr1:203499649|203499851:+_chr1:203502914|203503009:+_chr1:203503550|203503745:+_chr1:203508646|203508864:+","OPTC_LS002","OPTC","protein coding gene","no",10.82,0,0.69,0.004,34,0,0,"0.04(689)","UVM","yes","NA","NA","intron_intersect_chr1:203496236|203496977","exon_intersect_chr1:203496977|203497115"]
["chr1:203497115|203498681:+","chr1:203494143|203494217:+_chr1:203495965|203496236:+_chr1:203496977|203497115:+_chr1:203498681|203498839:+_chr1:203499649|203499851:+_chr1:203502914|203503009:+_chr1:203503550|203503745:+_chr1:203508646|203508864:+","OPTC_LS003","OPTC","protein coding gene","no",12.7,0,0.69,0.003,29,0,0,"0.089(1540)","UVM","yes","NA","NA","intron_intersect_chr1:203497115|203498681","exon_intersect_chr1:203498681|203498839"]
["chr1:203498839|203499649:+","chr1:203494143|203494217:+_chr1:203495965|203496236:+_chr1:203496977|203497115:+_chr1:203498681|203498839:+_chr1:203499649|203499851:+_chr1:203502914|203503009:+_chr1:203503550|203503745:+_chr1:203508646|203508864:+","OPTC_LS005","OPTC","protein coding gene","no",11.81,0,0.7,0.004,36,0,0,"0.089(1547)","UVM","yes","NA","NA","intron_intersect_chr1:203498839|203499649","exon_intersect_chr1:203499649|203499851"]
["chr1:203507187|203508646:+","chr1:203507125|203507187:+_chr1:203508646|203508865:+","UN_OPTC_LS0009","OPTC","protein coding gene","no",2.44,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:203503745|203508646","exon_intersect_chr1:203508646|203508864"]
["chr1:203512181|203513512:-","chr1:203508866|203510754:-_chr1:203512050|203512181:-_chr1:203513512|203516485:-_chr1:203516590|203518823:-_chr1:203521823|203521982:-","UN_LARP7P1_UP_LS0025","LARP7P1","pseudogene","no",2.87,0,0,0.007,70,0,0,"0(0)","LGG","no","TE_intersect_:203513453|chr1|203513453|203513610|MIR3:MIR:SINE|312|+","NA","NA","NA"]
["chr1:203513726|203531961:+","chr1:203513003|203513093:+_chr1:203513643|203513726:+_chr1:203531961|203532483:+","UN_ATP2B4_UP_LS0007","ATP2B4","protein coding gene","no",2.79,0.02,0,0.014,138,0.001,1,"0(0)","SARC","no","NA","TE_intersect_:203531778|chr1|203531778|203532060|AluJo:Alu:SINE|167|-","NA","NA"]
["chr1:203516485|203516590:-","chr1:203508866|203510754:-_chr1:203512050|203512181:-_chr1:203513512|203516485:-_chr1:203516590|203518823:-_chr1:203521823|203521982:-","UN_LARP7P1_UP_LS0028","LARP7P1","pseudogene","no",2,0,0,0.004,34,0,0,"0(0)","LGG","no","NA","NA","NA","NA"]
["chr1:203530076|203531961:+","chr1:203529962|203530076:+_chr1:203531961|203532498:+","UN_ATP2B4_UP_LS0012","ATP2B4","protein coding gene","no",2.38,0,0,0.003,29,0,0,"0(0)","OV","no","NA","TE_intersect_:203531778|chr1|203531778|203532060|AluJo:Alu:SINE|167|-","NA","NA"]
["chr1:203744320|203751294:-","chr1:203737124|203738047:-_chr1:203744205|203744320:-_chr1:203751294|203751339:-_chr1:203752245|203752404:-_chr1:203754495|203754637:-","UN_AL513343.1_UP_LS0004","AL513343.1","pseudogene","no",2.8,0,0,0.005,44,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:203744320|203752245:-","chr1:203737199|203738047:-_chr1:203744205|203744320:-_chr1:203752245|203752430:-_chr1:203754495|203754690:-","UN_AL513343.1_UP_LS0006","AL513343.1","pseudogene","no",3.06,0,0,0.011,105,0,0,"0(0)","DLBC;TGCT","no","TE_intersect_:203752179|chr1|203752179|203752285|L2a:L2:LINE|208|-","NA","NA","NA"]
["chr1:203744320|203754495:-","chr1:203737140|203738047:-_chr1:203744205|203744320:-_chr1:203754495|203754599:-","UN_AL513343.1_UP_LS0007","AL513343.1","pseudogene","no",3.76,0,0,0.003,32,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:203751339|203752245:-","chr1:203737124|203738047:-_chr1:203744205|203744320:-_chr1:203751294|203751339:-_chr1:203752245|203752404:-_chr1:203754495|203754637:-","UN_AL513343.1_UP_LS0008","AL513343.1","pseudogene","no",3.15,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:203752179|chr1|203752179|203752285|L2a:L2:LINE|208|-","NA","NA","NA"]
["chr1:203751339|203754495:-","chr1:203737199|203738047:-_chr1:203744205|203744320:-_chr1:203751294|203751339:-_chr1:203754495|203754690:-","UN_AL513343.1_UP_LS0009","AL513343.1","pseudogene","no",2.42,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:203752430|203754495:-","chr1:203737199|203738047:-_chr1:203744205|203744320:-_chr1:203752245|203752430:-_chr1:203754495|203754690:-","UN_AL513343.1_UP_LS0012","AL513343.1","pseudogene","no",2.54,0,0,0.006,61,0,0,"0(0)","TGCT","no","NA","TE_intersect_:203752285|chr1|203752285|203752448|AluJo:Alu:SINE|147|+","NA","NA"]
["chr1:20378432|20398483:-","chr1:20372466|20373738:-_chr1:20377381|20377509:-_chr1:20378311|20378432:-_chr1:20398483|20399549:-_chr1:20400935|20402872:-_chr1:20405575|20405694:-_chr1:20406187|20406269:-_chr1:20408706|20408814:-_chr1:20410261|20410360:-","UN_LINC01141_LS0008","LINC01141","lncRNA gene","no",2.29,0,0,0.006,53,0,0,"0(0)","GBM;LGG","no","TE_intersect_:20398358|chr1|20398358|20398498|MIRb:MIR:SINE|271|-","TE_intersect_:20378151|chr1|20378151|20378451|AluJo:Alu:SINE|170|+","exon_intersect_chr1:20398483|20398787","intron_intersect_chr1:20378432|20378973"]
["chr1:20378432|20405575:-","chr1:20372611|20373738:-_chr1:20378311|20378432:-_chr1:20405575|20405694:-_chr1:20406187|20406269:-_chr1:20410261|20410458:-","UN_LINC01141_LS0009","LINC01141","lncRNA gene","no",2.79,0,0,0.011,108,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:20378151|chr1|20378151|20378451|AluJo:Alu:SINE|170|+","exon_intersect_chr1:20405575|20405694","intron_intersect_chr1:20378432|20378973"]
["chr1:203861955|203862182:+","chr1:203861615|203861955:+_chr1:203862182|203862222:+_chr1:203863663|203863725:+_chr1:203865041|203865119:+_chr1:203869877|203870051:+","UN_SNRPE_LS0004","SNRPE","protein coding gene","no",28.06,0,0,0.004,38,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:203861603|203862222","exon_intersect_chr1:203861603|203862222"]
["chr1:203871520|203946855:+","chr1:203861615|203861713:+_chr1:203862196|203862222:+_chr1:203863663|203863725:+_chr1:203865041|203865119:+_chr1:203869877|203871520:+_chr1:203946855|203946973:+_chr1:203955514|203956575:+","UN_CBX1P3_UP_LS0002","CBX1P3","pseudogene","no",3.11,0,0,0.004,43,0,0,"0(0)","LGG","no","NA","TE_intersect_:203946753|chr1|203946753|203947456|L1MEd:L1:LINE|277|-","NA","NA"]
["chr1:203919462|203919688:-","chr1:203918574|203919289:-_chr1:203919418|203919462:-_chr1:203919688|203919824:-","UN_HSPE1P6_UP_LS0004","HSPE1P6","pseudogene","no",1.63,0,0,0.004,34,0,0,"0(0)","ESCA","no","TE_intersect_:203918559|chr1|203918559|203920471|SVA_D:SVA:Retroposon|98|-","TE_intersect_:203918559|chr1|203918559|203920471|SVA_D:SVA:Retroposon|98|-","NA","NA"]
["chr1:203919666|203919887:+","chr1:203919185|203919666:+_chr1:203919887|203920470:+","UN_CBX1P3_UP_LS0010","CBX1P3","pseudogene","no",1.94,0,0,0.002,15,0,0,"0(0)","ESCA","no","TE_intersect_:203918559|chr1|203918559|203920471|SVA_D:SVA:Retroposon|98|-","TE_intersect_:203918559|chr1|203918559|203920471|SVA_D:SVA:Retroposon|98|-","NA","NA"]
["chr1:203932346|203946855:+","chr1:203932268|203932346:+_chr1:203946855|203946973:+_chr1:203955514|203956729:+","UN_CBX1P3_UP_LS0011","CBX1P3","pseudogene","no",2.42,0,0,0.005,47,0,0,"0(0)","LGG","no","TE_intersect_:203932180|chr1|203932180|203932485|MLT1N2:ERVL-MaLR:LTR|317|-","TE_intersect_:203946753|chr1|203946753|203947456|L1MEd:L1:LINE|277|-","NA","NA"]
["chr1:203996696|204005582:+","chr1:203996407|203996696:+_chr1:204005582|204005702:+_chr1:204007868|204008925:+","UN_SOX13_UP_LS0002","SOX13","protein coding gene","no",2.06,0,0,0.009,90,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:204005382|chr1|204005382|204005783|MSTA:ERVL-MaLR:LTR|153|+","NA","NA"]
["chr1:204040394|204042557:-","chr1:204040161|204040394:-_chr1:204042557|204042675:-","UN_HSPE1P6_UP_LS0008","HSPE1P6","pseudogene","no",3.57,0,0,0.011,105,0,0,"0(0)","SARC;SKCM;THYM","no","TE_intersect_:204042480|chr1|204042480|204042835|THE1B:ERVL-MaLR:LTR|108|-","NA","NA","intron_intersect_chr1:204040394|204041092"]
["chr1:204040394|204045125:-","chr1:204040173|204040394:-_chr1:204045125|204045302:-","UN_HSPE1P6_UP_LS0009","HSPE1P6","pseudogene","no",10.27,0,0,0.007,70,0,0,"0(0)","OV","no","TE_intersect_:204045093|chr1|204045093|204045321|MIRc:MIR:SINE|322|-","NA","NA","intron_intersect_chr1:204040394|204041092"]
["chr1:20406269|20410261:-","chr1:20372936|20373738:-_chr1:20405575|20405694:-_chr1:20406187|20406269:-_chr1:20410261|20410420:-","UN_LINC01141_LS0025","LINC01141","lncRNA gene","no",2.73,0,0,0.011,104,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:20406269|20412304","intron_intersect_chr1:20406269|20412304"]
["chr1:20406269|20428918:-","chr1:20372941|20373738:-_chr1:20378311|20378432:-_chr1:20405575|20405694:-_chr1:20406187|20406269:-_chr1:20428918|20429161:-","UN_LINC01141_LS0027","LINC01141","lncRNA gene","no",1.82,0,0,0.003,27,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:20428782|20431177","intron_intersect_chr1:20406269|20412304"]
["chr1:20408810|20410261:-","chr1:20371972|20373738:-_chr1:20378311|20378432:-_chr1:20378973|20384301:-_chr1:20398483|20398787:-_chr1:20405575|20405694:-_chr1:20406187|20406269:-_chr1:20408706|20408810:-_chr1:20410261|20410458:-","UN_LINC01141_LS0028","LINC01141","lncRNA gene","no",1.35,0,0,0.003,27,0,0,"0(0)","GBM","no","NA","TE_intersect_:20408663|chr1|20408663|20408847|AluJb:Alu:SINE|179|+","intron_intersect_chr1:20406269|20412304","intron_intersect_chr1:20406269|20412304"]
["chr1:20408814|20410261:-","chr1:20371972|20373738:-_chr1:20378311|20378432:-_chr1:20405575|20405694:-_chr1:20406187|20406269:-_chr1:20408706|20408814:-_chr1:20410261|20410458:-","UN_LINC01141_LS0029","LINC01141","lncRNA gene","no",1.01,0,0,0.003,32,0,0,"0(0)","GBM","no","NA","TE_intersect_:20408663|chr1|20408663|20408847|AluJb:Alu:SINE|179|+","intron_intersect_chr1:20406269|20412304","intron_intersect_chr1:20406269|20412304"]
["chr1:204127023|204127364:-","chr1:204112921|204113051:-_chr1:204126374|204126796:-_chr1:204126833|204127023:-_chr1:204127364|204127591:-","UN_SOX13_LS0037","SOX13","protein coding gene","no",1.11,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:204125858|204127743","exon_intersect_chr1:204125858|204127743"]
["chr1:204127029|204127368:-","chr1:204126819|204127029:-_chr1:204127368|204127441:-","UN_SOX13_LS0040","SOX13","protein coding gene","no",3.5,0,0,0.004,41,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:204125858|204127743","exon_intersect_chr1:204125858|204127743"]
["chr1:204192914|204194104:-","chr1:204190297|204190797:-_chr1:204192774|204192914:-_chr1:204194104|204194248:-","UN_KISS1_LS0003","KISS1","protein coding gene","yes",3.88,0,0,0.006,54,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:204192914|204196376","intron_intersect_chr1:204192914|204196376"]
["chr1:204192914|204213882:-","chr1:204190411|204190797:-_chr1:204192774|204192914:-_chr1:204213882|204213999:-","UN_REN_UP_LS0005","REN","protein coding gene","no",10.11,0.31,0,0.019,186,0.001,1,"0(0)","LIHC","no","NA","NA","exon_intersect_chr1:204213882|204214092","intron_intersect_chr1:204192914|204196376"]
["chr1:204250614|204255626:-","chr1:204220758|204222779:-_chr1:204223462|204223585:-_chr1:204228083|204228228:-_chr1:204228728|204228861:-_chr1:204228937|204229104:-_chr1:204230413|204230586:-_chr1:204241375|204241481:-_chr1:204241685|204241814:-_chr1:204243114|204243263:-_chr1:204244864|204245003:-_chr1:204245615|204245726:-_chr1:204247365|204247460:-_chr1:204248821|204248970:-_chr1:204249184|204249264:-_chr1:204250546|204250614:-_chr1:204255626|204255679:-_chr1:204256802|204256888:-_chr1:204257353|204257869:-_chr1:204259258|204259740:-_chr1:204261306|204261448:-_chr1:204264942|204265042:-_chr1:204267475|204267547:-_chr1:204268208|204268312:-_chr1:204273626|204273738:-","UN_PLEKHA6_LS0044","PLEKHA6","protein coding gene","no",1.51,0,0,0.002,16,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:204250614|204257353","intron_intersect_chr1:204250614|204257353"]
["chr1:204274809|204350884:-","chr1:204218851|204222779:-_chr1:204228083|204228228:-_chr1:204228728|204228861:-_chr1:204228937|204229104:-_chr1:204230413|204230589:-_chr1:204241375|204241481:-_chr1:204241685|204241814:-_chr1:204243114|204243263:-_chr1:204244864|204245003:-_chr1:204245615|204245726:-_chr1:204247365|204247460:-_chr1:204248821|204248970:-_chr1:204249184|204249264:-_chr1:204250546|204250614:-_chr1:204256802|204256888:-_chr1:204257353|204257869:-_chr1:204259258|204259740:-_chr1:204261306|204261448:-_chr1:204261960|204265042:-_chr1:204267475|204267547:-_chr1:204268208|204268312:-_chr1:204273626|204273740:-_chr1:204274729|204274809:-_chr1:204350884|204351012:-","UN_PLEKHA6_LS0089","PLEKHA6","protein coding gene","no",1.51,0,0,0.004,36,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:204347258|204359694","intron_intersect_chr1:204274809|204277005"]
["chr1:204377995|204434884:+","chr1:204377663|204377995:+_chr1:204434884|204434909:+","UN_AL606489.1_LS0003","AL606489.1","lncRNA gene","no",2.56,0,0,0.003,32,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:204377995|204394541","intron_intersect_chr1:204434608|204435337"]
["chr1:204412082|204482108:+","chr1:204411802|204412082:+_chr1:204482108|204482126:+","UN_MDM4_UP_LS0002","MDM4","protein coding gene","yes",49.6,0,0,0.004,37,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:204411791|204422628","intron_intersect_chr1:204469886|204489816"]
["chr1:204516619|204525484:+","chr1:204516472|204516619:+_chr1:204525484|204525596:+_chr1:204526360|204526434:+_chr1:204530684|204530817:+_chr1:204532191|204532246:+_chr1:204537430|204537497:+_chr1:204538209|204538308:+_chr1:204542784|204542944:+_chr1:204544535|204544684:+_chr1:204546797|204546877:+_chr1:204549113|204558119:+","UN_MDM4_LS0002","MDM4","protein coding gene","yes",1.74,0.06,0,0.022,215,0.01,7,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:204516509|204525484","exon_intersect_chr1:204525484|204525596"]
["chr1:204552058|204552535:+","chr1:204542789|204542944:+_chr1:204544535|204544684:+_chr1:204546797|204546877:+_chr1:204549113|204552058:+_chr1:204552535|204558119:+","UN_MDM4_LS0041","MDM4","protein coding gene","yes",24.57,0,0,0.003,28,0,0,"0(0)","ESCA","no","TE_intersect_:204552004|chr1|204552004|204552305|AluSp:Alu:SINE|90|+","TE_intersect_:204552325|chr1|204552325|204552621|AluSg:Alu:SINE|108|-","exon_intersect_chr1:204549113|204558120","exon_intersect_chr1:204549113|204558120"]
["chr1:204555205|204555801:+","chr1:204525519|204525596:+_chr1:204526360|204526434:+_chr1:204530684|204530817:+_chr1:204532191|204532246:+_chr1:204537430|204537497:+_chr1:204538209|204538308:+_chr1:204542784|204542944:+_chr1:204544535|204544684:+_chr1:204546797|204546877:+_chr1:204549113|204555205:+_chr1:204555801|204558119:+","UN_MDM4_LS0050","MDM4","protein coding gene","yes",14.53,0,0,0.006,55,0,0,"0(0)","ESCA;LAML","no","TE_intersect_:204555154|chr1|204555154|204555452|AluY:Alu:SINE|57|-","TE_intersect_:204555582|chr1|204555582|204555868|AluSx:Alu:SINE|112|+","exon_intersect_chr1:204549113|204558120","exon_intersect_chr1:204549113|204558120"]
["chr1:204567908|204570660:+","chr1:204542789|204542944:+_chr1:204544535|204544684:+_chr1:204546797|204546877:+_chr1:204549113|204549162:+_chr1:204558641|204558729:+_chr1:204567761|204567908:+_chr1:204570660|204570746:+_chr1:204573687|204573743:+_chr1:204579267|204581683:+","UN_AL512306.3_UP_LS0017","AL512306.3","lncRNA gene","no",1.91,0,0,0.004,39,0,0,"0(0)","THYM","no","TE_intersect_:204567731|chr1|204567731|204567996|AluJb:Alu:SINE|128|-","NA","NA","NA"]
["chr1:204570746|204573687:+","chr1:204542789|204542944:+_chr1:204544535|204544684:+_chr1:204546797|204546877:+_chr1:204549113|204549162:+_chr1:204558641|204558729:+_chr1:204567761|204567908:+_chr1:204570660|204570746:+_chr1:204573687|204573743:+_chr1:204579267|204581683:+","UN_AL512306.3_UP_LS0018","AL512306.3","lncRNA gene","no",2.17,0,0,0.005,46,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:204618912|204621145:+","chr1:204617233|204617385:+_chr1:204617461|204617811:+_chr1:204617843|204618002:+_chr1:204618209|204618234:+_chr1:204618311|204618505:+_chr1:204618594|204618912:+_chr1:204621145|204621213:+_chr1:204621357|204621839:+_chr1:204621955|204622122:+_chr1:204626973|204627376:+_chr1:204628096|204629712:+","UN_LRRN2_LS0046","LRRN2","protein coding gene","no",1.3,0.01,0,0.003,33,0.001,1,"0(0)","THYM","no","NA","NA","exon_intersect_chr1:204617170|204622205","exon_intersect_chr1:204617170|204622205"]
["chr1:204621645|204685320:-","chr1:204617170|204620218:-_chr1:204621293|204621645:-_chr1:204685320|204685733:-","UN_LRRN2_LS0089","LRRN2","protein coding gene","no",0.71,0,0,0.008,81,0,0,"0(0)","KICH","no","NA","NA","exon_intersect_chr1:204685320|204685733","exon_intersect_chr1:204617170|204622205"]
["chr1:204660194|204660219:+","chr1:204654098|204660194:+_chr1:204660219|204663801:+","UN_LRRN2_LS0107","LRRN2","protein coding gene","no",1.52,0,0,0.006,61,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:204633246|204663872","intron_intersect_chr1:204633246|204663872"]
["chr1:20481877|20483448:+","chr1:20481675|20481877:+_chr1:20483448|20483643:+","UN_RPS4XP4_UP_LS0001","RPS4XP4","pseudogene","no",1.61,0,0,0.003,30,0,0,"0(0)","STAD","no","NA","NA","NA","exon_intersect_chr1:20482391|20483719"]
["chr1:20499887|20499960:+","chr1:20499844|20499887:+_chr1:20499960|20500197:+","UN_MUL1_LS0008","MUL1","protein coding gene","no",1.9,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:20499448|20501419","exon_intersect_chr1:20499448|20501419"]
["chr1:20501436|20502069:-","chr1:20499448|20501436:-_chr1:20502069|20502189:-_chr1:20503222|20503309:-_chr1:20507905|20508149:-","UN_MUL1_LS0027","MUL1","protein coding gene","no",11.21,0,0,0.004,34,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:20502069|20502189","intron_intersect_chr1:20501419|20502069"]
["chr1:205304235|205304308:+","chr1:205304091|205304235:+_chr1:205304308|205304458:+_chr1:205305211|205305328:+","UN_NUAK2_LS0036","NUAK2","protein coding gene","yes",2.41,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:205302059|205304513","exon_intersect_chr1:205302059|205304513"]
["chr1:205441062|205445036:-","chr1:205440607|205441062:-_chr1:205445036|205445177:-","UN_LEMD1_LS0030","LEMD1","protein coding gene","no",2.04,0,0,0.012,118,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:205441062|205448291","intron_intersect_chr1:205441062|205448291"]
["chr1:205441560|205449868:-","chr1:205434886|205441560:-_chr1:205449868|205449949:-","UN_LEMD1_LS0035","LEMD1","protein coding gene","no",0.87,0,0,0.008,76,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr1:205449868|205449931","intron_intersect_chr1:205441062|205448291"]
["chr1:205542964|205768677:+","chr1:205542906|205542964:+_chr1:205768677|205768834:+","UN_AC119673.1_UP_LS0002","AC119673.1","no","no",6.15,0,0,0.017,159,0,0,"0(0)","GBM;OV","no","TE_intersect_:205542808|chr1|205542808|205543119|AluSq2:Alu:SINE|112|-","TE_intersect_:205768525|chr1|205768525|205768833|AluSq2:Alu:SINE|107|-","NA","exon_intersect_chr1:205767986|205770453"]
["chr1:205773195|205774405:+","chr1:205773010|205773195:+_chr1:205774405|205774552:+","UN_RAB29_LS0017","RAB29","protein coding gene","no",2.8,0,0,0.002,16,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:205772567|205774833","intron_intersect_chr1:205772567|205774833"]
["chr1:205933084|205933307:-","chr1:205913054|205915404:-_chr1:205917283|205917354:-_chr1:205918840|205918985:-_chr1:205920176|205920230:-_chr1:205921566|205921847:-_chr1:205923082|205923195:-_chr1:205923335|205923427:-_chr1:205923544|205923613:-_chr1:205924383|205924489:-_chr1:205926535|205926630:-_chr1:205927211|205927288:-_chr1:205927492|205927605:-_chr1:205927902|205928049:-_chr1:205928827|205928909:-_chr1:205929204|205929356:-_chr1:205929892|205930056:-_chr1:205931860|205932035:-_chr1:205932702|205932812:-_chr1:205932945|205933084:-_chr1:205933307|205933592:-","UN_SLC26A9_LS0022","SLC26A9","protein coding gene","no",1.87,0,0,0.009,89,0,0,"0(0)","OV;STAD","no","NA","NA","intron_intersect_chr1:205933084|205935128","intron_intersect_chr1:205933084|205935128"]
["chr1:205935767|205971687:+","chr1:205935128|205935196:+_chr1:205935608|205935767:+_chr1:205971687|205971784:+_chr1:205976019|205976743:+","UN_BX571818.1_UP_LS0006","BX571818.1","pseudogene","no",7,0,0,0.005,49,0,0,"0(0)","LUAD","no","NA","TE_intersect_:205971630|chr1|205971630|205971959|AluJb:Alu:SINE|143|-","exon_intersect_chr1:205935696|205935838","NA"]
["chr1:205962477|205971687:+","chr1:205962262|205962477:+_chr1:205971687|205971784:+_chr1:205976019|205976743:+","UN_BX571818.1_UP_LS0013","BX571818.1","pseudogene","no",4.64,0,0,0.004,40,0,0,"0(0)","OV","no","NA","TE_intersect_:205971630|chr1|205971630|205971959|AluJb:Alu:SINE|143|-","NA","NA"]
["chr1:206041690|206051853:+","chr1:206035200|206035299:+_chr1:206041566|206041690:+_chr1:206051853|206052001:+_chr1:206053021|206053265:+_chr1:206056179|206056463:+_chr1:206060401|206060449:+_chr1:206061345|206061397:+_chr1:206061662|206064469:+","BX571818.1_LS003","BX571818.1","pseudogene","no",1.69,0,0,0.003,27,0,0,"0(0)","DLBC;LAML","yes","NA","NA","intron_intersect_chr1:206037299|206051742","exon_intersect_chr1:206051742|206052001"]
["chr1:206055768|206055969:-","chr1:206053331|206055768:-_chr1:206055969|206056366:-","UN_RHEX_LS0025","RHEX","protein coding gene","no",21,0,0,0.003,28,0,0,"0(0)","OV","no","TE_intersect_:206054885|chr1|206054885|206058429|Harlequin-int:ERV1:LTR|114|+","TE_intersect_:206054885|chr1|206054885|206058429|Harlequin-int:ERV1:LTR|114|+","intron_intersect_chr1:206053334|206056371","intron_intersect_chr1:206053334|206056371"]
["chr1:206060449|206060714:+","chr1:206051854|206052001:+_chr1:206053021|206053265:+_chr1:206056224|206056463:+_chr1:206060401|206060449:+_chr1:206060714|206060833:+_chr1:206061345|206061397:+_chr1:206061662|206063042:+_chr1:206063511|206063809:+","UN_RHEX_LS0049","RHEX","protein coding gene","no",9.26,0,0,0.002,19,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:206060449|206061158","intron_intersect_chr1:206060449|206061158"]
["chr1:206063981|206064098:+","chr1:206052845|206056463:+_chr1:206060401|206060449:+_chr1:206061345|206061397:+_chr1:206061662|206063042:+_chr1:206063443|206063981:+_chr1:206064098|206064304:+_chr1:206097733|206097839:+_chr1:206098081|206098181:+_chr1:206099655|206099798:+_chr1:206101136|206101197:+_chr1:206101752|206102448:+","UN_RHEX_LS0092","RHEX","protein coding gene","no",42.16,0,0,0.004,38,0,0,"0(0)","OV","no","TE_intersect_:206063364|chr1|206063364|206065290|SVA_D:SVA:Retroposon|34|+","TE_intersect_:206063364|chr1|206063364|206065290|SVA_D:SVA:Retroposon|34|+","intron_intersect_chr1:206062257|206080239","intron_intersect_chr1:206062257|206080239"]
["chr1:206064304|206064569:+","chr1:206052845|206056463:+_chr1:206060401|206060449:+_chr1:206061345|206061397:+_chr1:206061662|206063981:+_chr1:206064098|206064304:+_chr1:206064569|206070865:+_chr1:206097733|206097839:+_chr1:206098081|206098181:+_chr1:206099655|206101984:+","UN_RHEX_LS0113","RHEX","protein coding gene","no",9.82,0,0,0.005,49,0,0,"0(0)","OV","no","TE_intersect_:206063364|chr1|206063364|206065290|SVA_D:SVA:Retroposon|34|+","TE_intersect_:206063364|chr1|206063364|206065290|SVA_D:SVA:Retroposon|34|+","intron_intersect_chr1:206062257|206080239","intron_intersect_chr1:206062257|206080239"]
["chr1:206064435|206064651:+","chr1:206052845|206056463:+_chr1:206060401|206060449:+_chr1:206061345|206061397:+_chr1:206061662|206064435:+_chr1:206064651|206097839:+_chr1:206098081|206098181:+_chr1:206099655|206099798:+_chr1:206101136|206101197:+_chr1:206101752|206101984:+","UN_RHEX_LS0122","RHEX","protein coding gene","no",12.55,0,0,0.01,96,0,0,"0(0)","OV","no","TE_intersect_:206063364|chr1|206063364|206065290|SVA_D:SVA:Retroposon|34|+","TE_intersect_:206063364|chr1|206063364|206065290|SVA_D:SVA:Retroposon|34|+","intron_intersect_chr1:206062257|206080239","intron_intersect_chr1:206062257|206080239"]
["chr1:206064480|206070739:+","chr1:206052845|206056463:+_chr1:206060401|206060449:+_chr1:206061345|206061397:+_chr1:206061662|206064480:+_chr1:206070739|206074230:+","UN_RHEX_LS0124","RHEX","protein coding gene","no",7.49,0,0,0.004,41,0,0,"0(0)","TGCT","no","TE_intersect_:206063364|chr1|206063364|206065290|SVA_D:SVA:Retroposon|34|+","TE_intersect_:206070635|chr1|206070635|206070794|Zaphod3:hAT-Tip100:DNA|176|-","intron_intersect_chr1:206062257|206080239","intron_intersect_chr1:206062257|206080239"]
["chr1:206070865|206074677:+","chr1:206063870|206064097:+_chr1:206070739|206070865:+_chr1:206074677|206079190:+","UN_RHEX_LS0131","RHEX","protein coding gene","no",3.14,0.06,0,0.008,72,0.001,1,"0(0)","UCEC","no","TE_intersect_:206070825|chr1|206070825|206070940|MIRc:MIR:SINE|304|+","TE_intersect_:206074673|chr1|206074673|206075604|Tigger4:TcMar-Tigger:DNA|130|+","intron_intersect_chr1:206062257|206080239","intron_intersect_chr1:206062257|206080239"]
["chr1:206116136|206116214:+","chr1:206064534|206064695:+_chr1:206097733|206098181:+_chr1:206098772|206099798:+_chr1:206115940|206116136:+_chr1:206116214|206116288:+_chr1:206116372|206116437:+_chr1:206117693|206117825:+_chr1:206118070|206118164:+_chr1:206121455|206127686:+","UN_AVPR1B_LS0003","AVPR1B","protein coding gene","no",3.13,0,0,0.011,105,0,0,"0(0)","OV;UCEC","no","NA","NA","exon_intersect_chr1:206115951|206117355","exon_intersect_chr1:206115951|206117355"]
["chr1:206116288|206116372:+","chr1:206064534|206064695:+_chr1:206097733|206098181:+_chr1:206098772|206099798:+_chr1:206115940|206116136:+_chr1:206116214|206116288:+_chr1:206116372|206116437:+_chr1:206117693|206117825:+_chr1:206118070|206118164:+_chr1:206121455|206127686:+","UN_AVPR1B_LS0004","AVPR1B","protein coding gene","no",4.08,0,0,0.008,74,0,0,"0(0)","UCEC","no","NA","NA","exon_intersect_chr1:206115951|206117355","exon_intersect_chr1:206115951|206117355"]
["chr1:206117370|206117693:+","chr1:206117338|206117370:+_chr1:206117693|206117825:+_chr1:206118070|206127686:+","UN_AVPR1B_LS0007","AVPR1B","protein coding gene","no",2.95,0,0,0.006,56,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr1:206117355|206117664","exon_intersect_chr1:206117664|206117699"]
["chr1:206380902|206381461:-","chr1:206378864|206380902:-_chr1:206381461|206381599:-","UN_SRGAP2_LS0017","SRGAP2","protein coding gene","no",0.18,0,0,0.007,70,0.001,1,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:206381461|206381599","intron_intersect_chr1:206380902|206381461"]
["chr1:206430222|206434802:+","chr1:206205909|206206037:+_chr1:206303281|206303473:+_chr1:206342846|206343008:+_chr1:206384014|206384076:+_chr1:206392689|206392904:+_chr1:206393545|206393673:+_chr1:206401421|206401645:+_chr1:206405249|206405350:+_chr1:206406377|206406574:+_chr1:206415889|206415973:+_chr1:206419373|206419400:+_chr1:206421250|206421274:+_chr1:206430162|206430222:+_chr1:206434802|206434901:+_chr1:206436965|206437042:+_chr1:206437964|206438098:+_chr1:206439976|206440081:+_chr1:206446075|206446299:+_chr1:206450386|206450465:+_chr1:206453200|206453380:+_chr1:206454878|206456131:+","UN_SRGAP2_LS0027","SRGAP2","protein coding gene","no",1.1,0,0,0.002,16,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:206430222|206436965","intron_intersect_chr1:206430222|206436965"]
["chr1:206434901|206436965:+","chr1:206205909|206206037:+_chr1:206303281|206303473:+_chr1:206342846|206343008:+_chr1:206384014|206384076:+_chr1:206392689|206392904:+_chr1:206393545|206393673:+_chr1:206401421|206401645:+_chr1:206405249|206405350:+_chr1:206406377|206406574:+_chr1:206415889|206415973:+_chr1:206419373|206419400:+_chr1:206421250|206421274:+_chr1:206430162|206430222:+_chr1:206434802|206434901:+_chr1:206436965|206437042:+_chr1:206437964|206438098:+_chr1:206439976|206440081:+_chr1:206446075|206446299:+_chr1:206450386|206450465:+_chr1:206453200|206453380:+_chr1:206454878|206456131:+","UN_SRGAP2_LS0028","SRGAP2","protein coding gene","no",1.21,0,0,0.003,28,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:206430222|206436965","exon_intersect_chr1:206436965|206437042"]
["chr1:206480533|206483977:+","chr1:206470495|206470698:+_chr1:206471156|206471245:+_chr1:206473196|206473314:+_chr1:206474331|206474471:+_chr1:206474865|206474994:+_chr1:206476181|206476362:+_chr1:206476678|206476838:+_chr1:206477749|206478339:+_chr1:206478943|206479133:+_chr1:206479870|206479934:+_chr1:206480022|206480113:+_chr1:206480447|206480533:+_chr1:206483977|206484058:+_chr1:206484997|206485072:+_chr1:206485194|206487990:+_chr1:206490819|206490858:+_chr1:206491648|206491749:+_chr1:206493023|206493378:+_chr1:206493920|206493991:+_chr1:206496112|206496274:+","UN_IKBKE_LS0012","IKBKE","protein coding gene","yes",2.56,0,0,0.002,21,0,0,"0(0)","LAML","no","NA","TE_intersect_:206483955|chr1|206483955|206484095|AluJr:Alu:SINE|175|-","intron_intersect_chr1:206480533|206484997","intron_intersect_chr1:206480533|206484997"]
["chr1:20652367|20652455:+","chr1:20620824|20620850:+_chr1:20652103|20652367:+_chr1:20652455|20652528:+","UN_DDOST_LS0009","DDOST","protein coding gene","no",5.79,0.03,0,0.012,113,0.001,1,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chr1:20648315|20652528","exon_intersect_chr1:20648315|20652528"]
["chr1:20652454|20654268:+","chr1:20645824|20646058:+_chr1:20652066|20652454:+_chr1:20654268|20654376:+","UN_DDOST_LS0013","DDOST","protein coding gene","no",1.81,0,0,0.008,72,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:20648315|20652528","exon_intersect_chr1:20654223|20654371"]
["chr1:20653661|20653761:-","chr1:20652634|20652727:-_chr1:20652851|20652971:-_chr1:20653627|20653661:-_chr1:20653761|20653774:-_chr1:20654223|20654371:-_chr1:20654614|20654707:-_chr1:20655440|20655534:-_chr1:20655676|20655779:-_chr1:20656101|20656187:-_chr1:20660881|20660991:-_chr1:20661197|20661369:-","UN_DDOST_LS0038","DDOST","protein coding gene","no",267.01,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:20653627|20653774","exon_intersect_chr1:20653627|20653774"]
["chr1:20660947|20661204:+","chr1:20660884|20660947:+_chr1:20661204|20661389:+","UN_DDOST_LS0058","DDOST","protein coding gene","no",8.58,0.21,0,0.021,203,0.004,3,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:20660399|20660991","exon_intersect_chr1:20661197|20661544"]
["chr1:206648569|206648634:+","chr1:206635579|206635780:+_chr1:206636875|206636968:+_chr1:206637650|206637761:+_chr1:206647388|206648569:+_chr1:206648634|206655140:+","UN_DYRK3_LS0009","DYRK3","protein coding gene","no",1.91,0.01,0,0.008,72,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr1:206647388|206649197","exon_intersect_chr1:206647388|206649197"]
["chr1:206732757|206733653:-","chr1:206732595|206732757:-_chr1:206733653|206733711:-","UN_MAPKAPK2_LS0024","MAPKAPK2","protein coding gene","no",2.04,0,0,0.005,44,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:206731806|206734283","exon_intersect_chr1:206731806|206734283"]
["chr1:206771078|206798861:+","chr1:206770753|206771078:+_chr1:206798861|206799006:+_chr1:206825490|206828981:+","UN_IL19_UP_LS0002","IL19","protein coding gene","no",1.18,0,0,0.003,28,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chr1:206770907|206771199","NA"]
["chr1:206799006|206825490:+","chr1:206770753|206771078:+_chr1:206798861|206799006:+_chr1:206825490|206828981:+","UN_IL19_LS0004","IL19","protein coding gene","no",3.27,0,0,0.005,46,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:206799006|206828877","intron_intersect_chr1:206799006|206828877"]
["chr1:206808189|206929102:+","chr1:206808118|206808189:+_chr1:206929102|206929521:+","UN_PFKFB2_UP_LS0002","PFKFB2","protein coding gene","no",75.47,0,0,0.002,22,0,0,"0(0)","STAD","no","TE_intersect_:206808048|chr1|206808048|206808358|AluSz6:Alu:SINE|142|+","TE_intersect_:206928949|chr1|206928949|206929263|AluSz6:Alu:SINE|143|+","intron_intersect_chr1:206799006|206828877","exon_intersect_chr1:206928518|206930413"]
["chr1:206865426|206865532:+","chr1:206865354|206865426:+_chr1:206865532|206865686:+_chr1:206865823|206866011:+_chr1:206866299|206866364:+_chr1:206866484|206866636:+_chr1:206867384|206867458:+_chr1:206868487|206868914:+","UN_IL20_LS0001","IL20","protein coding gene","no",1.16,0,0,0.005,45,0,0,"0(0)","BRCA","no","NA","NA","exon_intersect_chr1:206865354|206865686","exon_intersect_chr1:206865354|206865686"]
["chr1:206927858|206935208:+","chr1:206927613|206927858:+_chr1:206935208|206935322:+_chr1:206945621|206945836:+","UN_PFKFB2_UP_LS0019","PFKFB2","protein coding gene","no",4.4,0,0,0.012,112,0,0,"0(0)","COAD;ESCA;READ;STAD","no","NA","NA","NA","intron_intersect_chr1:206934746|206935486"]
["chr1:206932519|206934644:+","chr1:206931851|206932519:+_chr1:206934644|206935595:+_chr1:206937111|206937378:+_chr1:206937438|206937810:+","UN_PIGR_LS0111","PIGR","protein coding gene","no",0.48,0,0,0.003,33,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:206932456|206932577","exon_intersect_chr1:206934420|206934746"]
["chr1:206935322|206943693:+","chr1:206927542|206927858:+_chr1:206935208|206935322:+_chr1:206943693|206943860:+_chr1:206945621|206945790:+_chr1:206947615|206951883:+","UN_PIGR_LS0121","PIGR","protein coding gene","no",3.29,0,0,0.005,48,0,0,"0(0)","READ","no","NA","NA","intron_intersect_chr1:206934746|206935486","intron_intersect_chr1:206940584|206946336"]
["chr1:206935322|206945621:+","chr1:206927613|206927858:+_chr1:206935208|206935322:+_chr1:206945621|206945836:+","UN_PIGR_LS0122","PIGR","protein coding gene","no",6.88,0,0,0.008,81,0,0,"0(0)","COAD;READ","no","NA","NA","intron_intersect_chr1:206934746|206935486","intron_intersect_chr1:206940584|206946336"]
["chr1:206943860|206945621:+","chr1:206943725|206943860:+_chr1:206945621|206945790:+_chr1:206947615|206947643:+","UN_PIGR_LS0172","PIGR","protein coding gene","no",3.02,0,0,0.008,72,0,0,"0(0)","COAD;READ","no","TE_intersect_:206943854|chr1|206943854|206944053|MIR:MIR:SINE|303|-","NA","intron_intersect_chr1:206940584|206946336","intron_intersect_chr1:206940584|206946336"]
["chr1:206945790|206947615:+","chr1:206943725|206943860:+_chr1:206945621|206945790:+_chr1:206947615|206947643:+","UN_PFKFB2_UP_LS0023","PFKFB2","protein coding gene","no",2.71,0,0,0.009,88,0,0,"0(0)","COAD;READ;STAD","no","NA","TE_intersect_:206947595|chr1|206947595|206947901|L1PA10:L1:LINE|102|-","intron_intersect_chr1:206940584|206946336","NA"]
["chr1:207070409|207071509:+","chr1:207060860|207060930:+_chr1:207061953|207062078:+_chr1:207062620|207062716:+_chr1:207063143|207063209:+_chr1:207063347|207063421:+_chr1:207063773|207063829:+_chr1:207065036|207065160:+_chr1:207067499|207067706:+_chr1:207068163|207068309:+_chr1:207069424|207069528:+_chr1:207070280|207070409:+_chr1:207071509|207071573:+_chr1:207072204|207077817:+","PFKFB2_LS028","PFKFB2","protein coding gene","no",1.55,0,0,0.006,58,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chr1:207070409|207070645","exon_intersect_chr1:207071509|207071573"]
["chr1:207206832|207218473:+","chr1:207206740|207206832:+_chr1:207218473|207218518:+_chr1:207220367|207220607:+_chr1:207228788|207230912:+","UN_C4BPAP2_UP_LS0001","C4BPAP2","pseudogene","no",6.56,0,0,0.007,63,0,0,"0(0)","ESCA","no","TE_intersect_:207206734|chr1|207206734|207212907|L1PA4:L1:LINE|47|+","NA","NA","NA"]
["chr1:207218518|207220367:+","chr1:207206740|207206832:+_chr1:207218473|207218518:+_chr1:207220367|207220607:+_chr1:207228788|207230912:+","UN_C4BPAP2_UP_LS0002","C4BPAP2","pseudogene","no",3.3,0,0,0.008,72,0,0,"0(0)","ESCA","no","NA","TE_intersect_:207219801|chr1|207219801|207220376|LTR61:ERV1:LTR|133|+","NA","NA"]
["chr1:207296463|207301770:+","chr1:207296163|207296463:+_chr1:207301770|207301907:+_chr1:207308467|207314185:+","UN_AL596218.1_LS0003","AL596218.1","lncRNA gene","no",5.14,0,0,0.005,51,0,0,"0(0)","LUAD","no","NA","TE_intersect_:207301718|chr1|207301718|207301822|L2b:L2:LINE|414|-","intron_intersect_chr1:207265036|207301770","exon_intersect_chr1:207301770|207301907"]
["chr1:20732271|20732474:-","chr1:20719732|20721995:-_chr1:20722756|20722915:-_chr1:20723626|20723734:-_chr1:20724083|20724251:-_chr1:20724396|20724635:-_chr1:20725920|20726066:-_chr1:20727001|20727075:-_chr1:20727523|20727603:-_chr1:20727958|20728086:-_chr1:20732004|20732271:-_chr1:20732474|20732837:-","UN_SH2D5_LS0026","SH2D5","protein coding gene","no",0.55,0,0,0.003,24,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:20732181|20732640","exon_intersect_chr1:20732181|20732640"]
["chr1:20743432|20743837:+","chr1:20743327|20743432:+_chr1:20743837|20744152:+","UN_HP1BP3_LS0008","HP1BP3","protein coding gene","no",1.36,0,0,0.004,40,0,0,"0(0)","ESCA","no","TE_intersect_:20743381|chr1|20743381|20743690|AluSc8:Alu:SINE|126|+","TE_intersect_:20743785|chr1|20743785|20744071|AluSx:Alu:SINE|94|+","exon_intersect_chr1:20742661|20745091","exon_intersect_chr1:20742661|20745091"]
["chr1:207634762|207639397:+","chr1:207634496|207634762:+_chr1:207639397|207641958:+","UN_CR1_LS0018","CR1","protein coding gene","no",3.46,0,0,0.002,23,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:207630627|207639397","exon_intersect_chr1:207639397|207640647"]
["chr1:207685761|207686791:+","chr1:207645113|207645330:+_chr1:207677389|207677568:+_chr1:207678198|207678297:+_chr1:207683872|207683957:+_chr1:207685694|207685761:+_chr1:207686791|207687852:+","UN_CR1L_LS0010","CR1L","protein coding gene","no",3.31,0,0,0.007,66,0,0,"0(0)","KICH;TGCT","no","TE_intersect_:207685205|chr1|207685205|207685768|ERVL-E-int:ERVL:LTR|241|-","TE_intersect_:207686732|chr1|207686732|207687049|MLT1A0:ERVL-MaLR:LTR|178|+","intron_intersect_chr1:207684036|207694353","intron_intersect_chr1:207684036|207694353"]
["chr1:207686940|207694353:+","chr1:207686834|207686940:+_chr1:207694353|207694751:+_chr1:207697503|207697667:+","UN_CR1L_LS0011","CR1L","protein coding gene","no",3.7,0,0,0.003,27,0,0,"0(0)","KICH","no","TE_intersect_:207686732|chr1|207686732|207687049|MLT1A0:ERVL-MaLR:LTR|178|+","NA","intron_intersect_chr1:207684036|207694353","exon_intersect_chr1:207694353|207694751"]
["chr1:207708263|207710382:+","chr1:207677460|207677568:+_chr1:207678198|207678297:+_chr1:207683872|207683957:+_chr1:207686791|207686940:+_chr1:207694353|207694751:+_chr1:207697503|207697679:+_chr1:207697771|207697873:+_chr1:207699189|207699274:+_chr1:207701519|207701618:+_chr1:207708178|207708263:+_chr1:207710382|207715397:+_chr1:207717464|207717691:+_chr1:207723618|207724708:+_chr1:207738404|207745281:+","UN_CR1L_LS0015","CR1L","protein coding gene","no",5.26,0,0,0.002,23,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:207708263|207708898","exon_intersect_chr1:207710382|207710818"]
["chr1:207886774|207886807:+","chr1:207886671|207886774:+_chr1:207886807|207886948:+_chr1:207887273|207887460:+","UN_CD34_LS0006","CD34","protein coding gene","no",7.16,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:207880972|207888118","exon_intersect_chr1:207880972|207888118"]
["chr1:207887792|207897503:+","chr1:207886775|207886840:+_chr1:207887062|207887586:+_chr1:207887615|207887792:+_chr1:207897503|207897553:+","UN_CD34_LS0042","CD34","protein coding gene","no",2.85,0,0,0.003,32,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:207880972|207888118","exon_intersect_chr1:207897493|207897573"]
["chr1:208103247|208132000:-","chr1:208022261|208027338:-_chr1:208028009|208028159:-_chr1:208028830|208031338:-_chr1:208031590|208031759:-_chr1:208031980|208032174:-_chr1:208033319|208033509:-_chr1:208034493|208034592:-_chr1:208038371|208038474:-_chr1:208038825|208038984:-_chr1:208039621|208039767:-_chr1:208039992|208040058:-_chr1:208042098|208042366:-_chr1:208043061|208043203:-_chr1:208044508|208044742:-_chr1:208045067|208045210:-_chr1:208045878|208046117:-_chr1:208049496|208049657:-_chr1:208051009|208051102:-_chr1:208051256|208051423:-_chr1:208052327|208052463:-_chr1:208054421|208054538:-_chr1:208060686|208060837:-_chr1:208079260|208079450:-_chr1:208082412|208082508:-_chr1:208084380|208084580:-_chr1:208087956|208088201:-_chr1:208092786|208092900:-_chr1:208096029|208096125:-_chr1:208096730|208096883:-_chr1:208098846|208098969:-_chr1:208103147|208103247:-_chr1:208132000|208132285:-","UN_PLXNA2_LS0043","PLXNA2","protein coding gene","no",1.24,0,0,0.003,32,0,0,"0(0)","TGCT","no","TE_intersect_:208131839|chr1|208131839|208132053|MIRb:MIR:SINE|313|+","NA","intron_intersect_chr1:208103247|208142329","intron_intersect_chr1:208103247|208142329"]
["chr1:208219474|208224649:+","chr1:208219286|208219474:+_chr1:208224649|208224707:+_chr1:208225704|208225912:+","UN_PLXNA2_LS0063","PLXNA2","protein coding gene","no",1.93,0,0,0.004,41,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:208218002|208230191","intron_intersect_chr1:208218002|208230191"]
["chr1:20849530|20850872:-","chr1:20825104|20825198:-_chr1:20827617|20827698:-_chr1:20829147|20829272:-_chr1:20840856|20841028:-_chr1:20849415|20849530:-_chr1:20850872|20850985:-","UN_EIF4G3_LS0026","EIF4G3","protein coding gene","no",2.67,0,0,0.004,37,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:20849530|20851258","intron_intersect_chr1:20849530|20851258"]
["chr1:208604494|208605952:-","chr1:208603614|208604494:-_chr1:208605952|208607275:-_chr1:208612090|208612192:-","UN_AL606753.1_UP_LS0004","AL606753.1","pseudogene","no",1.17,0,0,0.002,20,0,0,"0(0)","PCPG","no","TE_intersect_:208605883|chr1|208605883|208606010|MIRb:MIR:SINE|333|-","NA","NA","NA"]
["chr1:209303997|209304142:+","chr1:209303806|209303997:+_chr1:209304142|209304233:+_chr1:209312177|209312518:+","UN_LINC01696_UP_LS0001","LINC01696","lncRNA gene","no",5.67,0,0,0.005,46,0,0,"0(0)","TGCT","no","NA","TE_intersect_:209304123|chr1|209304123|209304609|L2c:L2:LINE|360|-","NA","NA"]
["chr1:209304233|209312177:+","chr1:209303806|209303997:+_chr1:209304142|209304233:+_chr1:209312177|209312518:+","UN_LINC01696_UP_LS0002","LINC01696","lncRNA gene","no",4.73,0,0,0.006,53,0,0,"0(0)","TGCT","no","TE_intersect_:209304123|chr1|209304123|209304609|L2c:L2:LINE|360|-","TE_intersect_:209312006|chr1|209312006|209312312|LTR79:ERVL:LTR|272|+","NA","NA"]
["chr1:209357092|209368415:+","chr1:209355411|209357092:+_chr1:209368415|209368469:+_chr1:209373394|209373554:+_chr1:209379427|209383402:+","UN_MIR205HG_UP_LS0001","MIR205HG","lncRNA gene","no",2.96,0,0,0.01,95,0,0,"0(0)","ESCA;LUSC","no","NA","TE_intersect_:209368369|chr1|209368369|209368541|MIR3:MIR:SINE|319|-","NA","exon_intersect_chr1:209368415|209368469"]
["chr1:209443066|209443191:-","chr1:209442436|209443066:-_chr1:209443191|209443568:-","UN_ATP5MC2P1_UP_LS0016","ATP5MC2P1","pseudogene","no",2.8,0,0,0.011,108,0,0,"0(0)","ESCA;HNSC;LUSC","no","TE_intersect_:209443096|chr1|209443096|209443297|MLT1B:ERVL-MaLR:LTR|174|+","TE_intersect_:209442796|chr1|209442796|209443096|AluSz:Alu:SINE|133|+","NA","NA"]
["chr1:209449093|209449175:+","chr1:209448729|209449093:+_chr1:209449175|209449404:+_chr1:209456716|209457923:+","UN_CAMK1G_UP_LS0001","CAMK1G","protein coding gene","no",7.5,0,0,0.004,35,0,0,"0(0)","CESC","no","TE_intersect_:209448804|chr1|209448804|209449256|LTR7:ERV1:LTR|54|+","TE_intersect_:209448804|chr1|209448804|209449256|LTR7:ERV1:LTR|54|+","NA","NA"]
["chr1:209449404|209456716:+","chr1:209448729|209449093:+_chr1:209449175|209449404:+_chr1:209456716|209457923:+","UN_CAMK1G_UP_LS0006","CAMK1G","protein coding gene","no",4.46,0,0,0.003,29,0,0,"0(0)","CESC","no","TE_intersect_:209449258|chr1|209449258|209452322|HERVH-int:ERV1:LTR|101|+","TE_intersect_:209456488|chr1|209456488|209456774|L2c:L2:LINE|317|+","NA","NA"]
["chr1:209451481|209456716:+","chr1:209448805|209449093:+_chr1:209449175|209449404:+_chr1:209451328|209451481:+_chr1:209456716|209457919:+","UN_CAMK1G_UP_LS0008","CAMK1G","protein coding gene","no",4.61,0,0,0.003,31,0,0,"0(0)","CESC","no","TE_intersect_:209449258|chr1|209449258|209452322|HERVH-int:ERV1:LTR|101|+","TE_intersect_:209456488|chr1|209456488|209456774|L2c:L2:LINE|317|+","NA","NA"]
["chr1:209531374|209535666:-","chr1:209511412|209517353:-_chr1:209525162|209525393:-_chr1:209526275|209526559:-_chr1:209531247|209531374:-_chr1:209535666|209535760:-_chr1:209537289|209537852:-","UN_AL023754.1_LS0009","AL023754.1","lncRNA gene","no",1.3,0,0,0.006,60,0,0,"0(0)","BRCA","no","TE_intersect_:209535635|chr1|209535635|209535831|LTR33A:ERVL:LTR|302|+","NA","intron_intersect_chr1:209531374|209540698","intron_intersect_chr1:209531374|209540698"]
["chr1:209690669|209701233:-","chr1:209661366|209661567:-_chr1:209662911|209663061:-_chr1:209690572|209690669:-_chr1:209701233|209701310:-","UN_HSD11B1_LS0007","HSD11B1","protein coding gene","no",2.88,0,0,0.002,15,0,0,"0(0)","DLBC","no","TE_intersect_:209701157|chr1|209701157|209701511|THE1A:ERVL-MaLR:LTR|76|-","TE_intersect_:209690414|chr1|209690414|209690703|AluSq2:Alu:SINE|104|+","intron_intersect_chr1:209686285|209704846","intron_intersect_chr1:209686285|209704846"]
["chr1:209779569|209781345:+","chr1:209777439|209777487:+_chr1:209778111|209778173:+_chr1:209779315|209779569:+_chr1:209781345|209781458:+_chr1:209782056|209782183:+","UN_C1orf74_LS0004","C1orf74","protein coding gene","no",16.04,0.02,0,0.003,28,0.001,1,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:209779208|209783709","exon_intersect_chr1:209779208|209783709"]
["chr1:21024259|21053889:+","chr1:21023281|21024259:+_chr1:21053889|21054478:+","UN_EIF4G3_LS0083","EIF4G3","protein coding gene","no",0.64,0,0,0.002,17,0,0,"0(0)","ESCA","no","TE_intersect_:21023239|chr1|21023239|21024912|SVA_F:SVA:Retroposon|26|+","TE_intersect_:21052543|chr1|21052543|21054486|SVA_D:SVA:Retroposon|24|+","intron_intersect_chr1:21003934|21050866","intron_intersect_chr1:21050994|21064531"]
["chr1:21024509|21054089:+","chr1:21023284|21023923:+_chr1:21023964|21024509:+_chr1:21054089|21054467:+","UN_EIF4G3_LS0084","EIF4G3","protein coding gene","no",1.25,0,0,0.002,15,0,0,"0(0)","ESCA","no","TE_intersect_:21023239|chr1|21023239|21024912|SVA_F:SVA:Retroposon|26|+","TE_intersect_:21052543|chr1|21052543|21054486|SVA_D:SVA:Retroposon|24|+","intron_intersect_chr1:21003934|21050866","intron_intersect_chr1:21050994|21064531"]
["chr1:210439478|210464505:+","chr1:210439405|210439478:+_chr1:210464505|210464655:+_chr1:210513153|210513188:+_chr1:210587898|210588099:+_chr1:210623526|210623670:+_chr1:210674288|210676296:+","UN_HHAT_LS0037","HHAT","protein coding gene","no",2.36,0,0,0.012,112,0,0,"0(0)","SKCM","no","TE_intersect_:210438946|chr1|210438946|210439615|ERVL-B4-int:ERVL:LTR|320|-","NA","intron_intersect_chr1:210418325|210439583","exon_intersect_chr1:210464505|210464655"]
["chr1:210680652|210685717:+","chr1:210328910|210329104:+_chr1:210348933|210349066:+_chr1:210362852|210362919:+_chr1:210387468|210387581:+_chr1:210400468|210400662:+_chr1:210404464|210404679:+_chr1:210418154|210418325:+_chr1:210464505|210464655:+_chr1:210513153|210513188:+_chr1:210587898|210588099:+_chr1:210623526|210623670:+_chr1:210674288|210676712:+_chr1:210679120|210679177:+_chr1:210680497|210680652:+_chr1:210685717|210685796:+_chr1:210697480|210697573:+_chr1:210708591|210708615:+_chr1:210710645|210710687:+_chr1:210740741|210740896:+_chr1:210753299|210754800:+","UN_KCNH1_LS0002","KCNH1","protein coding gene","no",0.9,0,0,0.004,36,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr1:210678315|210684138","intron_intersect_chr1:210684138|210775348"]
["chr1:210697573|210699306:+","chr1:210674322|210676712:+_chr1:210679120|210679177:+_chr1:210680497|210680652:+_chr1:210685717|210685796:+_chr1:210697480|210697573:+_chr1:210699306|210699776:+","UN_KCNH1_LS0005","KCNH1","protein coding gene","no",1.45,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:210684138|210775348","intron_intersect_chr1:210684138|210775348"]
["chr1:211260164|211260687:+","chr1:211259606|211259726:+_chr1:211260108|211260164:+_chr1:211260687|211261202:+","UN_RCOR3_LS0005","RCOR3","protein coding gene","no",1.8,0,0,0.004,42,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:211260164|211260929","intron_intersect_chr1:211260164|211260929"]
["chr1:211372947|211373760:+","chr1:211360635|211360779:+_chr1:211361088|211361162:+_chr1:211365376|211365468:+_chr1:211369452|211369592:+_chr1:211371302|211371470:+_chr1:211372128|211372947:+_chr1:211373760|211374785:+","UN_TRAF5_LS0040","TRAF5","protein coding gene","no",5.71,0,0,0.006,53,0,0,"0(0)","DLBC","no","NA","TE_intersect_:211373743|chr1|211373743|211374032|AluSq2:Alu:SINE|111|-","exon_intersect_chr1:211372128|211374946","exon_intersect_chr1:211372128|211374946"]
["chr1:211391976|211426211:+","chr1:211382820|211382925:+_chr1:211391616|211391697:+_chr1:211391827|211391976:+_chr1:211426211|211426283:+_chr1:211432319|211432534:+","UN_LINC00467_LS0009","LINC00467","lncRNA gene","no",4.69,0,0,0.008,75,0,0,"0(0)","GBM;OV;UCS","no","NA","NA","intron_intersect_chr1:211391976|211396767","exon_intersect_chr1:211426211|211426283"]
["chr1:211396831|211399377:+","chr1:211382820|211382925:+_chr1:211391616|211391697:+_chr1:211391827|211391976:+_chr1:211396767|211396831:+_chr1:211399377|211399437:+_chr1:211426211|211426283:+_chr1:211432319|211432534:+","UN_LINC00467_LS0014","LINC00467","lncRNA gene","no",3.09,0.02,0,0.018,173,0.001,1,"0(0)","LIHC","no","NA","TE_intersect_:211399312|chr1|211399312|211400193|HERVK11-int:ERVK:LTR|161|+","intron_intersect_chr1:211396831|211398036","exon_intersect_chr1:211399258|211399437"]
["chr1:211417934|211426211:+","chr1:211417025|211417934:+_chr1:211426211|211426283:+_chr1:211432319|211432534:+","UN_LINC00467_LS0021","LINC00467","lncRNA gene","no",4.08,0,0,0.004,39,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:211417934|211426211","exon_intersect_chr1:211426211|211426283"]
["chr1:211481426|211483119:-","chr1:211476522|211479327:-_chr1:211481120|211481426:-_chr1:211483119|211483451:-_chr1:211491768|211492031:-","UN_RD3_LS0002","RD3","protein coding gene","no",1.57,0,0,0.004,39,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:211481429|211491768","exon_intersect_chr1:211481120|211481429"]
["chr1:211481426|211491768:-","chr1:211476522|211479327:-_chr1:211481120|211481426:-_chr1:211491768|211492031:-","RD3_LS003","RD3","protein coding gene","no",3.32,0,0,0.008,75,0,0,"0(0)","PCPG;TGCT","yes","NA","NA","exon_intersect_chr1:211491768|211492917","exon_intersect_chr1:211481120|211481429"]
["chr1:211481429|211483119:-","chr1:211476522|211479327:-_chr1:211481120|211481429:-_chr1:211483119|211483451:-_chr1:211491768|211492031:-","UN_RD3_LS0004","RD3","protein coding gene","no",2.61,0,0,0.009,86,0,0,"0(0)","OV;PCPG;UCS","no","NA","NA","intron_intersect_chr1:211481429|211491768","intron_intersect_chr1:211481429|211491768"]
["chr1:211483451|211491768:-","chr1:211476522|211479327:-_chr1:211481120|211481429:-_chr1:211483119|211483451:-_chr1:211491768|211492031:-","UN_RD3_LS0006","RD3","protein coding gene","no",5.91,0,0,0.003,32,0,0,"0(0)","PCPG","no","NA","TE_intersect_:211483179|chr1|211483179|211483473|AluSz:Alu:SINE|116|+","exon_intersect_chr1:211491768|211492917","intron_intersect_chr1:211481429|211491768"]
["chr1:211531908|211538351:-","chr1:211531391|211531908:-_chr1:211538351|211538506:-","UN_RD3_UP_LS0001","RD3","protein coding gene","no",3.79,0,0,0.001,13,0,0,"0(0)","UCS","no","NA","TE_intersect_:211531901|chr1|211531901|211531994|MIR:MIR:SINE|215|+","NA","NA"]
["chr1:211750050|211750743:-","chr1:211743457|211750050:-_chr1:211750743|211751067:-_chr1:211778918|211779044:-_chr1:211783229|211783502:-_chr1:211787632|211787727:-_chr1:211793072|211793190:-_chr1:211829059|211829338:-","UN_LPGAT1_LS0014","LPGAT1","protein coding gene","no",2.68,0,0,0.003,30,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:211750050|211750961","intron_intersect_chr1:211750050|211750961"]
["chr1:211750878|211750961:-","chr1:211743457|211750878:-_chr1:211750961|211751067:-_chr1:211778918|211779044:-_chr1:211783229|211783502:-_chr1:211787632|211787727:-_chr1:211793072|211803013:-","UN_LPGAT1_LS0015","LPGAT1","protein coding gene","no",12.93,0,0,0.002,22,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:211750961|211751067","intron_intersect_chr1:211750050|211750961"]
["chr1:211942111|211942823:-","chr1:211941532|211942111:-_chr1:211942823|211942861:-_chr1:211944784|211944969:-_chr1:211946607|211946705:-_chr1:211952569|211952701:-_chr1:211966430|211966498:-_chr1:211967878|211967981:-_chr1:211968513|211968707:-_chr1:211975166|211975342:-","UN_INTS7_LS0001","INTS7","protein coding gene","yes",1.07,0,0,0.003,26,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:211942111|211944784","intron_intersect_chr1:211942111|211944784"]
["chr1:211968707|211976582:-","chr1:211940210|211942111:-_chr1:211944784|211944969:-_chr1:211946607|211946705:-_chr1:211952569|211952701:-_chr1:211966430|211966498:-_chr1:211967878|211967981:-_chr1:211968513|211968707:-_chr1:211976582|211976719:-_chr1:211978272|211978511:-_chr1:211981093|211981173:-","UN_INTS7_LS0028","INTS7","protein coding gene","yes",2.73,0,0,0.006,53,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:211976582|211976719","intron_intersect_chr1:211968707|211975166"]
["chr1:212035942|212038631:+","chr1:212035751|212035942:+_chr1:212038631|212038646:+","UN_DTL_LS0001","DTL","protein coding gene","no",1.73,0,0,0.005,50,0,0,"0(0)","DLBC;TGCT","no","NA","TE_intersect_:212038305|chr1|212038305|212038725|L2:L2:LINE|338|+","intron_intersect_chr1:212035942|212042993","intron_intersect_chr1:212035942|212042993"]
["chr1:212051564|212051613:+","chr1:212051437|212051564:+_chr1:212051613|212051826:+","UN_DTL_LS0010","DTL","protein coding gene","no",22.82,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:212051524|212052006","exon_intersect_chr1:212051524|212052006"]
["chr1:212186838|212190041:+","chr1:212186684|212186838:+_chr1:212190041|212190550:+","UN_AL606468.1_LS0004","AL606468.1","lncRNA gene","no",2.29,0,0,0.007,63,0,0,"0(0)","DLBC;OV;TGCT","no","NA","TE_intersect_:212189994|chr1|212189994|212190046|MER115:hAT-Tip100:DNA|297|+","intron_intersect_chr1:212170295|212190041","exon_intersect_chr1:212190041|212190259"]
["chr1:212347406|212347974:+","chr1:212306781|212306900:+_chr1:212329135|212329331:+_chr1:212333497|212333598:+_chr1:212342188|212342280:+_chr1:212345803|212345933:+_chr1:212347347|212347406:+_chr1:212347974|212348021:+_chr1:212348389|212348497:+_chr1:212349189|212349242:+_chr1:212356626|212356676:+_chr1:212356950|212357069:+_chr1:212357157|212357284:+_chr1:212358686|212358787:+_chr1:212360638|212361861:+","UN_PPP2R5A_LS0034","PPP2R5A","protein coding gene","no",5.42,0.15,0,0.002,15,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:212347406|212348389","intron_intersect_chr1:212347406|212348389"]
["chr1:212361506|212361557:-","chr1:212361349|212361506:-_chr1:212361557|212361598:-","UN_PPP2R5A_LS0046","PPP2R5A","protein coding gene","no",1.78,0,0,0.002,22,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:212360638|212361863","exon_intersect_chr1:212360638|212361863"]
["chr1:212365376|212377562:-","chr1:212364476|212365376:-_chr1:212377562|212377706:-_chr1:212379895|212380037:-_chr1:212385274|212385425:-_chr1:212386891|212387100:-_chr1:212410425|212410521:-_chr1:212413898|212414080:-_chr1:212414722|212414895:-","UN_TMEM206_LS0003","TMEM206","protein coding gene","no",3.23,0,0,0.022,206,0,0,"0(0)","GBM;LGG;OV;UCS","no","NA","NA","exon_intersect_chr1:212377562|212377706","intron_intersect_chr1:212365376|212375193"]
["chr1:212421663|212424615:+","chr1:212421387|212421663:+_chr1:212424615|212424735:+_chr1:212442565|212442625:+_chr1:212444339|212444442:+_chr1:212445830|212446372:+","UN_NENF_UP_LS0003","NENF","protein coding gene","no",24.5,0,0,0.002,17,0,0,"0(0)","UVM","no","TE_intersect_:212421592|chr1|212421592|212421842|PRIMA41-int:ERV1:LTR|232|+","TE_intersect_:212422943|chr1|212422943|212424880|PRIMA41-int:ERV1:LTR|223|+","NA","NA"]
["chr1:212421663|212442546:+","chr1:212421379|212421663:+_chr1:212442546|212442625:+_chr1:212444339|212444442:+_chr1:212445830|212446372:+","UN_LINC01740_UP_LS0001","LINC01740","lncRNA gene","no",22.05,0.1,0,0.008,79,0.001,1,"0(0)","SKCM;UVM","no","TE_intersect_:212421592|chr1|212421592|212421842|PRIMA41-int:ERV1:LTR|232|+","NA","NA","exon_intersect_chr1:212442546|212442625"]
["chr1:212421663|212444339:+","chr1:212421337|212421663:+_chr1:212444339|212444442:+_chr1:212445830|212446372:+","UN_LINC01740_UP_LS0003","LINC01740","lncRNA gene","no",42.31,0,0,0.015,141,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:212421592|chr1|212421592|212421842|PRIMA41-int:ERV1:LTR|232|+","NA","NA","exon_intersect_chr1:212444339|212444442"]
["chr1:212422019|212424615:+","chr1:212421340|212421663:+_chr1:212421979|212422019:+_chr1:212424615|212424735:+_chr1:212442565|212442625:+_chr1:212444339|212444442:+_chr1:212445830|212446372:+","UN_NENF_UP_LS0004","NENF","protein coding gene","no",18.37,0,0,0.006,54,0,0,"0(0)","SKCM;UVM","no","NA","TE_intersect_:212422943|chr1|212422943|212424880|PRIMA41-int:ERV1:LTR|223|+","NA","NA"]
["chr1:212422019|212442546:+","chr1:212421382|212421663:+_chr1:212421979|212422019:+_chr1:212442546|212442625:+_chr1:212444339|212444442:+_chr1:212445830|212446372:+","UN_LINC01740_UP_LS0004","LINC01740","lncRNA gene","no",48.48,0,0,0.004,36,0,0,"0(0)","UVM","no","NA","NA","NA","exon_intersect_chr1:212442546|212442625"]
["chr1:212424735|212442565:+","chr1:212424566|212424735:+_chr1:212442565|212442625:+_chr1:212444339|212444442:+_chr1:212445830|212446377:+","UN_LINC01740_UP_LS0007","LINC01740","lncRNA gene","no",9.36,0.32,0,0.009,83,0.004,3,"0(0)","UVM","no","TE_intersect_:212422943|chr1|212422943|212424880|PRIMA41-int:ERV1:LTR|223|+","NA","NA","exon_intersect_chr1:212442546|212442625"]
["chr1:212431844|212432666:-","chr1:212429965|212430331:-_chr1:212431741|212431844:-_chr1:212432666|212432776:-","UN_TMEM206_UP_LS0010","TMEM206","protein coding gene","no",1.39,0,0,0.007,66,0,0,"0(0)","OV","no","NA","TE_intersect_:212431632|chr1|212431632|212431922|L2a:L2:LINE|270|+","NA","NA"]
["chr1:212637854|212639364:-","chr1:212627138|212636666:-_chr1:212637103|212637854:-_chr1:212639364|212639468:-_chr1:212664587|212664687:-_chr1:212665319|212665434:-","UN_AL590648.2_UP_LS0020","AL590648.2","lncRNA gene","no",1.45,0,0,0.003,26,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr1:212912054|212914251:+","chr1:212905667|212912054:+_chr1:212914251|212914635:+","UN_AC104333.4_UP_LS0002","AC104333.4","lncRNA gene","no",5.44,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:212910474|chr1|212910474|212912921|HERVH-int:ERV1:LTR|88|+","TE_intersect_:212914199|chr1|212914199|212914681|LTR7:ERV1:LTR|58|+","NA","NA"]
["chr1:212914441|212914473:-","chr1:212910009|212914441:-_chr1:212914473|212914620:-","UN_FLVCR1-DT_UP_LS0006","FLVCR1-DT","lncRNA gene","no",4.41,0,0,0.005,48,0,0,"0(0)","TGCT","no","TE_intersect_:212914199|chr1|212914199|212914681|LTR7:ERV1:LTR|58|+","TE_intersect_:212914199|chr1|212914199|212914681|LTR7:ERV1:LTR|58|+","NA","NA"]
["chr1:212917704|212918336:+","chr1:212916520|212917200:+_chr1:212917360|212917704:+_chr1:212918336|212920465:+","UN_VASH2_UP_LS0001","VASH2","protein coding gene","no",4.36,0,0,0.005,45,0,0,"0(0)","TGCT","no","TE_intersect_:212917556|chr1|212917556|212917861|AluSx1:Alu:SINE|95|-","NA","NA","NA"]
["chr1:212918386|212919585:+","chr1:212915572|212917200:+_chr1:212917360|212917704:+_chr1:212918336|212918386:+_chr1:212919585|212920388:+","UN_VASH2_UP_LS0002","VASH2","protein coding gene","no",4.87,0,0,0.004,41,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:212931333|212936199:+","chr1:212931140|212931333:+_chr1:212936199|212936283:+_chr1:212950127|212950190:+_chr1:212950588|212950740:+_chr1:212951339|212951818:+_chr1:212961166|212961254:+_chr1:212965722|212965778:+_chr1:212966271|212966345:+_chr1:212972580|212972961:+_chr1:212973955|212974070:+_chr1:212988512|212991990:+","UN_VASH2_UP_LS0003","VASH2","protein coding gene","no",2.4,0,0,0.004,43,0,0,"0(0)","LIHC","no","TE_intersect_:212930894|chr1|212930894|212931417|MLT2B2:ERVL:LTR|211|+","TE_intersect_:212936193|chr1|212936193|212936475|ERVL-E-int:ERVL:LTR|333|-","NA","NA"]
["chr1:21294210|21294307:+","chr1:21293950|21294210:+_chr1:21294307|21294327:+","UN_ECE1_LS0169","ECE1","protein coding gene","no",0.76,0,0,0.001,12,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chr1:21294154|21294424","exon_intersect_chr1:21294154|21294424"]
["chr1:212953224|212961166:+","chr1:212951543|212951818:+_chr1:212952430|212953224:+_chr1:212961166|212961254:+_chr1:212965722|212965778:+_chr1:212966271|212966345:+_chr1:212972580|212972918:+","UN_VASH2_LS0006","VASH2","protein coding gene","no",4.33,0,0,0.002,19,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:212952791|212961166","exon_intersect_chr1:212961166|212961360"]
["chr1:213000383|213001406:-","chr1:212997200|212997318:-_chr1:213000326|213000383:-_chr1:213001406|213007198:-_chr1:213008210|213008466:-_chr1:213011208|213011458:-_chr1:213013093|213013418:-","ANGEL2_LS004","ANGEL2","protein coding gene","no",3.71,0,0,0.003,32,0,0,"0(0)","LAML","yes","TE_intersect_:213001234|chr1|213001234|213002635|Tigger1:TcMar-Tigger:DNA|129|-","NA","exon_intersect_chr1:213000786|213002234","exon_intersect_chr1:213000326|213000570"]
["chr1:213430139|213474921:+","chr1:213429964|213430139:+_chr1:213474921|213475095:+_chr1:213546283|213546447:+_chr1:213731417|213731558:+_chr1:213794384|213794473:+_chr1:213861829|213862715:+","UN_AL592402.1_UP_LS0007","AL592402.1","lncRNA gene","no",2.9,0,0,0.001,14,0,0,"0(0)","PCPG","no","TE_intersect_:213430074|chr1|213430074|213430221|MIR3:MIR:SINE|351|-","NA","NA","NA"]
["chr1:213475095|213546283:+","chr1:213429964|213430139:+_chr1:213474921|213475095:+_chr1:213546283|213546447:+_chr1:213731417|213731558:+_chr1:213794384|213794473:+_chr1:213861829|213862715:+","UN_AC096639.1_UP_LS0001","AC096639.1","lncRNA gene","no",3.47,0,0,0.002,15,0,0,"0(0)","PCPG","no","NA","NA","NA","exon_intersect_chr1:213546283|213546447"]
["chr1:213608561|213623212:-","chr1:213606786|213608561:-_chr1:213623212|213623300:-_chr1:213631262|213631371:-_chr1:213649359|213649496:-","UN_RPL31P13_UP_LS0006","RPL31P13","pseudogene","no",3.54,0,0,0.007,63,0,0,"0(0)","COAD;READ","no","NA","NA","NA","NA"]
["chr1:213623300|213631262:-","chr1:213606786|213608561:-_chr1:213623212|213623300:-_chr1:213631262|213631371:-_chr1:213649359|213649496:-","UN_RPL31P13_UP_LS0008","RPL31P13","pseudogene","no",5.3,0,0,0.007,69,0,0,"0(0)","COAD;READ","no","TE_intersect_:213630989|chr1|213630989|213631356|L1PA4:L1:LINE|90|-","NA","NA","NA"]
["chr1:21388029|21388256:+","chr1:21387072|21388029:+_chr1:21388256|21388476:+_chr1:21389047|21389408:+","UN_PPP1R11P1_UP_LS0015","PPP1R11P1","pseudogene","no",1.75,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:21387076|chr1|21387076|21388677|SVA_F:SVA:Retroposon|102|+","TE_intersect_:21387076|chr1|21387076|21388677|SVA_F:SVA:Retroposon|102|+","NA","NA"]
["chr1:21388206|21388256:+","chr1:21386591|21388206:+_chr1:21388256|21388951:+_chr1:21389047|21393900:+","UN_PPP1R11P1_UP_LS0017","PPP1R11P1","pseudogene","no",2.53,0,0,0.002,19,0,0,"0(0)","ESCA","no","TE_intersect_:21387076|chr1|21387076|21388677|SVA_F:SVA:Retroposon|102|+","TE_intersect_:21387076|chr1|21387076|21388677|SVA_F:SVA:Retroposon|102|+","NA","NA"]
["chr1:21388349|21388604:+","chr1:21023278|21023923:+_chr1:21023964|21024164:+_chr1:21387931|21388349:+_chr1:21388604|21388951:+_chr1:21389047|21390129:+","UN_PPP1R11P1_UP_LS0020","PPP1R11P1","pseudogene","no",2.98,0,0,0.002,21,0,0,"0(0)","ESCA","no","TE_intersect_:21387076|chr1|21387076|21388677|SVA_F:SVA:Retroposon|102|+","TE_intersect_:21387076|chr1|21387076|21388677|SVA_F:SVA:Retroposon|102|+","NA","NA"]
["chr1:21388349|21389174:+","chr1:21387072|21388349:+_chr1:21389174|21389408:+","UN_PPP1R11P1_UP_LS0022","PPP1R11P1","pseudogene","no",2.14,0,0,0.002,17,0,0,"0(0)","ESCA","no","TE_intersect_:21387076|chr1|21387076|21388677|SVA_F:SVA:Retroposon|102|+","TE_intersect_:21388793|chr1|21388793|21389774|SVA_F:SVA:Retroposon|51|+","NA","NA"]
["chr1:21388697|21389174:+","chr1:21387025|21388697:+_chr1:21389174|21392331:+","UN_PPP1R11P1_UP_LS0029","PPP1R11P1","pseudogene","no",2.59,0,0,0.001,14,0,0,"0(0)","ESCA","no","TE_intersect_:21388677|chr1|21388677|21388776|SVA_F:SVA:Retroposon|51|+","TE_intersect_:21388793|chr1|21388793|21389774|SVA_F:SVA:Retroposon|51|+","NA","NA"]
["chr1:21388824|21389047:+","chr1:21023250|21023923:+_chr1:21023964|21024164:+_chr1:21387931|21388029:+_chr1:21388780|21388824:+_chr1:21389047|21389782:+","UN_PPP1R11P1_UP_LS0031","PPP1R11P1","pseudogene","no",0.98,0,0,0.003,31,0,0,"0(0)","ESCA","no","TE_intersect_:21388793|chr1|21388793|21389774|SVA_F:SVA:Retroposon|51|+","TE_intersect_:21388793|chr1|21388793|21389774|SVA_F:SVA:Retroposon|51|+","NA","NA"]
["chr1:21388951|21389047:+","chr1:21386591|21388206:+_chr1:21388256|21388951:+_chr1:21389047|21393900:+","UN_PPP1R11P1_UP_LS0032","PPP1R11P1","pseudogene","no",1.14,0,0,0.002,23,0,0,"0(0)","ESCA","no","TE_intersect_:21388793|chr1|21388793|21389774|SVA_F:SVA:Retroposon|51|+","TE_intersect_:21388793|chr1|21388793|21389774|SVA_F:SVA:Retroposon|51|+","NA","NA"]
["chr1:214072438|214111904:-","chr1:214053506|214054004:-_chr1:214058919|214059160:-_chr1:214072243|214072438:-_chr1:214111904|214112092:-","UN_AL592287.1_LS0005","AL592287.1","lncRNA gene","no",3.61,0,0,0.002,15,0,0,"0(0)","CHOL","no","NA","NA","NA","NA"]
["chr1:214312716|214314762:+","chr1:214312610|214312716:+_chr1:214314762|214314872:+_chr1:214318079|214318139:+_chr1:214318859|214318983:+_chr1:214324641|214324708:+_chr1:214327622|214327724:+_chr1:214330168|214330278:+_chr1:214330950|214331070:+","UN_SMYD2_LS0009","SMYD2","protein coding gene","no",11.05,0,0,0.002,21,0,0,"0(0)","KICH","no","TE_intersect_:214312302|chr1|214312302|214313119|L2a:L2:LINE|255|-","NA","intron_intersect_chr1:214305250|214314762","exon_intersect_chr1:214314762|214314872"]
["chr1:21431843|21431962:+","chr1:21429863|21430981:+_chr1:21431530|21431843:+_chr1:21431962|21432240:+","UN_CROCCP5_UP_LS0023","CROCCP5","pseudogene","no",1.37,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:214329136|214329929:-","chr1:214327955|214329136:-_chr1:214329929|214330092:-_chr1:214330245|214330361:-","UN_SMYD2_LS0019","SMYD2","protein coding gene","no",2,0,0,0.004,39,0,0,"0(0)","BLCA","no","NA","NA","intron_intersect_chr1:214327724|214330168","intron_intersect_chr1:214327724|214330168"]
["chr1:214330092|214330245:-","chr1:214327955|214329136:-_chr1:214329929|214330092:-_chr1:214330245|214330361:-","UN_SMYD2_LS0022","SMYD2","protein coding gene","no",1.33,0,0,0.004,35,0,0,"0(0)","BLCA","no","NA","NA","exon_intersect_chr1:214330168|214330278","intron_intersect_chr1:214327724|214330168"]
["chr1:214401772|214402556:-","chr1:214350785|214358050:-_chr1:214364512|214364675:-_chr1:214369457|214369691:-_chr1:214372711|214372839:-_chr1:214376219|214376437:-_chr1:214377959|214378102:-_chr1:214383311|214384788:-_chr1:214386844|214386922:-_chr1:214390988|214391045:-_chr1:214393695|214393777:-_chr1:214394899|214394986:-_chr1:214397913|214398001:-_chr1:214401685|214401772:-_chr1:214402556|214402661:-","UN_PTPN14_LS0032","PTPN14","protein coding gene","no",1.41,0,0,0.005,46,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr1:214401772|214402883","intron_intersect_chr1:214401772|214402883"]
["chr1:214464957|214476355:-","chr1:214357751|214358050:-_chr1:214364512|214364675:-_chr1:214369457|214369691:-_chr1:214372711|214372839:-_chr1:214376219|214376437:-_chr1:214377959|214378102:-_chr1:214383311|214384788:-_chr1:214386844|214386922:-_chr1:214390988|214391045:-_chr1:214393695|214393777:-_chr1:214394899|214394986:-_chr1:214397913|214398001:-_chr1:214401685|214401772:-_chr1:214402883|214402953:-_chr1:214411684|214411751:-_chr1:214414629|214414726:-_chr1:214451805|214451974:-_chr1:214464630|214464957:-_chr1:214476355|214476758:-","UN_PTPN14_LS0043","PTPN14","protein coding gene","no",2.95,0,0,0.017,159,0,0,"0(0)","KIRC;KIRP","no","NA","NA","intron_intersect_chr1:214464957|214482813","intron_intersect_chr1:214464957|214482813"]
["chr1:214642437|214652858:+","chr1:214603202|214603321:+_chr1:214613714|214613916:+_chr1:214614832|214615028:+_chr1:214618573|214618694:+_chr1:214619129|214619220:+_chr1:214620655|214620946:+_chr1:214622079|214622281:+_chr1:214629046|214629171:+_chr1:214630534|214630662:+_chr1:214632480|214632602:+_chr1:214637866|214638001:+_chr1:214639921|214642437:+_chr1:214652858|214652989:+_chr1:214655241|214655403:+_chr1:214656933|214657409:+_chr1:214658850|214659028:+_chr1:214663591|214664588:+","UN_CENPF_LS0011","CENPF","protein coding gene","no",3.6,0,0,0.02,187,0,0,"0(0)","BLCA;CESC;DLBC;TGCT;UCS","no","NA","NA","exon_intersect_chr1:214639921|214643324","exon_intersect_chr1:214652828|214652989"]
["chr1:214646044|214646591:-","chr1:214645828|214646044:-_chr1:214646591|214646804:-","UN_CENPF_LS0015","CENPF","protein coding gene","no",4.28,0,0,0.004,34,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:214644557|214647400","exon_intersect_chr1:214644557|214647400"]
["chr1:214824101|214825955:+","chr1:214824004|214824101:+_chr1:214825955|214826068:+_chr1:214915505|214916662:+","UN_GAPDHP24_UP_LS0004","GAPDHP24","pseudogene","no",3.02,0,0,0.017,162,0,0,"0(0)","OV;TGCT","no","TE_intersect_:214823074|chr1|214823074|214824392|L1PB1:L1:LINE|113|-","TE_intersect_:214825330|chr1|214825330|214826351|L1ME2:L1:LINE|274|-","NA","NA"]
["chr1:214826068|214826380:+","chr1:214823708|214824101:+_chr1:214825955|214826068:+_chr1:214826380|214826462:+","UN_GAPDHP24_UP_LS0005","GAPDHP24","pseudogene","no",2.72,0,0,0.005,47,0,0,"0(0)","TGCT","no","TE_intersect_:214825330|chr1|214825330|214826351|L1ME2:L1:LINE|274|-","TE_intersect_:214826357|chr1|214826357|214826492|FLAM_C:Alu:SINE|178|-","NA","NA"]
["chr1:214826068|214915505:+","chr1:214825952|214826068:+_chr1:214915505|214916667:+","UN_AC099563.1_UP_LS0003","AC099563.1","pseudogene","no",3.6,0,0,0.01,96,0,0,"0(0)","OV;TGCT","no","TE_intersect_:214825330|chr1|214825330|214826351|L1ME2:L1:LINE|274|-","NA","NA","NA"]
["chr1:214826470|214915505:+","chr1:214823699|214824101:+_chr1:214825955|214826068:+_chr1:214826380|214826470:+_chr1:214915505|214916640:+","UN_AC099563.1_UP_LS0005","AC099563.1","pseudogene","no",1.77,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:214826357|chr1|214826357|214826492|FLAM_C:Alu:SINE|178|-","NA","NA","NA"]
["chr1:214847917|214859738:-","chr1:214847543|214847917:-_chr1:214859738|214859901:-","UN_UBE2V1P13_UP_LS0003","UBE2V1P13","pseudogene","no",5.47,0,0,0.004,38,0,0,"0(0)","UVM","no","TE_intersect_:214859508|chr1|214859508|214860130|LTR66:ERVL:LTR|84|-","NA","NA","NA"]
["chr1:214914541|214915505:+","chr1:214914443|214914541:+_chr1:214915505|214916661:+","UN_AC099563.1_UP_LS0011","AC099563.1","pseudogene","no",1.58,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:214914421|chr1|214914421|214915468|L1MB5:L1:LINE|180|+","NA","NA","NA"]
["chr1:2153804|2155995:+","chr1:2153322|2153804:+_chr1:2155995|2156092:+_chr1:2169518|2169604:+_chr1:2172055|2172190:+_chr1:2172301|2172388:+_chr1:2173897|2174016:+_chr1:2174754|2174833:+_chr1:2175224|2175313:+_chr1:2184583|2184698:+_chr1:2184922|2185393:+","UN_PRKCZ_LS0028","PRKCZ","protein coding gene","no",5.14,0,0,0.004,40,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:2150979|2155995","exon_intersect_chr1:2155995|2156728"]
["chr1:215496409|215499076:+","chr1:215423614|215423991:+_chr1:215435336|215435473:+_chr1:215496368|215496409:+_chr1:215499076|215499408:+","UN_KCTD3_UP_LS0009","KCTD3","protein coding gene","no",2.76,0,0,0.001,13,0,0,"0(0)","ACC","no","NA","NA","NA","NA"]
["chr1:215567134|215567280:-","chr1:215566565|215567134:-_chr1:215567280|215567496:-","UN_AL450990.1_UP_LS0001","AL450990.1","lncRNA gene","no",1.73,0,0,0.011,110,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr1:21599617|21602804:-","chr1:21596222|21597264:-_chr1:21597686|21597728:-_chr1:21597961|21598064:-_chr1:21598400|21598502:-_chr1:21599494|21599617:-_chr1:21602804|21602913:-_chr1:21606066|21606197:-_chr1:21608213|21608350:-_chr1:21608850|21608936:-_chr1:21609575|21609646:-_chr1:21610120|21610275:-_chr1:21611452|21611581:-_chr1:21611716|21611816:-_chr1:21612026|21612109:-_chr1:21613176|21613229:-_chr1:21613628|21613706:-_chr1:21613986|21614089:-_chr1:21617306|21617491:-_chr1:21617934|21617972:-_chr1:21619025|21619072:-_chr1:21620015|21620050:-_chr1:21626304|21626397:-_chr1:21649761|21649796:-_chr1:21651779|21651820:-","RAP1GAP_LS012","RAP1GAP","protein coding gene","yes",4.06,0,0,0.027,261,0,0,"0(0)","ESCA;GBM;OV;STAD;UCEC;UCS","yes","NA","NA","exon_intersect_chr1:21602804|21603912","intron_intersect_chr1:21599617|21601684"]
["chr1:216010522|216013504:-","chr1:216010494|216010522:-_chr1:216013504|216013692:-","UN_USH2A_LS0014","USH2A","protein coding gene","no",0.45,0,0,0.003,24,0,0,"0(0)","OV","no","TE_intersect_:216013458|chr1|216013458|216013869|LTR7:ERV1:LTR|73|+","TE_intersect_:216008555|chr1|216008555|216011399|HERVH-int:ERV1:LTR|103|+","intron_intersect_chr1:216000562|216046431","intron_intersect_chr1:216000562|216046431"]
["chr1:216014524|216044927:+","chr1:216014372|216014524:+_chr1:216044927|216045048:+","UN_USH2A_LS0019","USH2A","protein coding gene","no",2.09,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:216000562|216046431","intron_intersect_chr1:216000562|216046431"]
["chr1:216145785|216152392:-","chr1:216145615|216145785:-_chr1:216152392|216152614:-","UN_USH2A_LS0027","USH2A","protein coding gene","no",5.58,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:216152206|chr1|216152206|216152688|LTR7:ERV1:LTR|56|+","TE_intersect_:216145600|chr1|216145600|216146051|LTR7:ERV1:LTR|58|+","intron_intersect_chr1:216097213|216173946","intron_intersect_chr1:216097213|216173946"]
["chr1:216703525|216705789:+","chr1:216703476|216703525:+_chr1:216705789|216705926:+_chr1:216709405|216709515:+","UN_ESRRG_LS0023","ESRRG","protein coding gene","no",4.06,0,0,0.003,30,0,0,"0(0)","BRCA","no","NA","NA","intron_intersect_chr1:216701509|216707359","intron_intersect_chr1:216701509|216707359"]
["chr1:216705926|216709405:+","chr1:216678514|216678617:+_chr1:216705789|216705926:+_chr1:216709405|216711980:+","UN_ESRRG_LS0024","ESRRG","protein coding gene","no",5.57,0,0,0.003,32,0,0,"0(0)","BRCA","no","NA","NA","intron_intersect_chr1:216701509|216707359","intron_intersect_chr1:216707486|216714516"]
["chr1:21693674|21695066:-","chr1:21679199|21679439:-_chr1:21680808|21680834:-_chr1:21687191|21687239:-_chr1:21689974|21690099:-_chr1:21693504|21693674:-_chr1:21695066|21695221:-_chr1:21701498|21701602:-_chr1:21703512|21703618:-_chr1:21704262|21704392:-_chr1:21705727|21705837:-_chr1:21706126|21706187:-_chr1:21706467|21706589:-_chr1:21706744|21706868:-_chr1:21715389|21715457:-_chr1:21721036|21721146:-","UN_USP48_LS0007","USP48","protein coding gene","no",5.97,0,0,0.003,24,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:21695066|21695221","intron_intersect_chr1:21690099|21695066"]
["chr1:217088038|217090431:-","chr1:217087540|217088038:-_chr1:217090431|217090542:-","UN_ESRRG_LS0085","ESRRG","protein coding gene","no",2.31,0,0,0.004,35,0,0,"0(0)","TGCT;UCS","no","NA","NA","exon_intersect_chr1:217090431|217090547","intron_intersect_chr1:217078360|217089507"]
["chr1:21748271|21748786:-","chr1:21723898|21728719:-_chr1:21729704|21729832:-_chr1:21736430|21736625:-_chr1:21747067|21747149:-_chr1:21748138|21748271:-_chr1:21748786|21751615:-_chr1:21752527|21752651:-_chr1:21752992|21753119:-_chr1:21756546|21756702:-_chr1:21756829|21756963:-_chr1:21757663|21757783:-_chr1:21782824|21782943:-","UN_USP48_LS0039","USP48","protein coding gene","no",1.77,0.04,0,0.003,33,0.004,3,"0(0)","LAML","no","TE_intersect_:21748628|chr1|21748628|21748928|AluSz6:Alu:SINE|140|+","NA","intron_intersect_chr1:21748271|21751507","intron_intersect_chr1:21748271|21751507"]
["chr1:217514889|217524134:-","chr1:217426992|217431365:-_chr1:217449249|217449337:-_chr1:217491680|217491750:-_chr1:217498356|217498395:-_chr1:217514822|217514889:-_chr1:217524134|217524840:-","GPATCH2_LS008","GPATCH2","protein coding gene","no",5.22,0,0,0.004,42,0,0,"0(0)","ESCA","yes","TE_intersect_:217523175|chr1|217523175|217524901|SVA_D:SVA:Retroposon|40|-","NA","intron_intersect_chr1:217514889|217608184","intron_intersect_chr1:217514889|217608184"]
["chr1:217523770|217524045:-","chr1:217523620|217523770:-_chr1:217524045|217524478:-","UN_GPATCH2_LS0019","GPATCH2","protein coding gene","no",6,0,0,0.002,20,0,0,"0(0)","ESCA","no","TE_intersect_:217523175|chr1|217523175|217524901|SVA_D:SVA:Retroposon|40|-","TE_intersect_:217523175|chr1|217523175|217524901|SVA_D:SVA:Retroposon|40|-","intron_intersect_chr1:217514889|217608184","intron_intersect_chr1:217514889|217608184"]
["chr1:217610400|217614141:-","chr1:217498356|217498395:-_chr1:217514822|217514889:-_chr1:217610321|217610400:-_chr1:217614141|217614202:-_chr1:217619783|217620499:-_chr1:217630916|217631070:-","GPATCH2_LS012","GPATCH2","protein coding gene","no",6.39,0,0,0.003,24,0,0,"0(0)","STAD","yes","NA","NA","exon_intersect_chr1:217614141|217614202","intron_intersect_chr1:217610400|217610889"]
["chr1:217651178|217683258:+","chr1:217631350|217631446:+_chr1:217648882|217648971:+_chr1:217651097|217651178:+_chr1:217683258|217683361:+_chr1:217741975|217742098:+_chr1:217774334|217774537:+_chr1:217782174|217782322:+_chr1:217801718|217801850:+_chr1:217862774|217862856:+_chr1:217866878|217867588:+","UN_SPATA17_LS0011","SPATA17","protein coding gene","no",2.69,0,0,0.011,107,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:217651178|217665279","exon_intersect_chr1:217683258|217683361"]
["chr1:217696259|217741975:+","chr1:217696049|217696259:+_chr1:217741975|217742098:+_chr1:217774334|217774537:+_chr1:217782174|217782322:+_chr1:217801718|217801850:+_chr1:217862774|217862856:+_chr1:217866878|217867588:+","UN_SPATA17_LS0018","SPATA17","protein coding gene","no",6.09,0,0,0.045,429,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;OV;TGCT;THYM;UCS","no","TE_intersect_:217690492|chr1|217690492|217696523|L1PA2:L1:LINE|12|-","NA","intron_intersect_chr1:217683361|217737844","exon_intersect_chr1:217741975|217742098"]
["chr1:218014994|218017172:+","chr1:218014834|218014994:+_chr1:218017172|218018469:+","UN_AL355526.1_UP_LS0006","AL355526.1","lncRNA gene","no",1.3,0,0,0.005,45,0,0,"0(0)","LUSC","no","TE_intersect_:218009227|chr1|218009227|218015252|L1HS:L1:LINE|5|-","TE_intersect_:218016996|chr1|218016996|218018275|HSMAR1:TcMar-Mariner:DNA|114|+","NA","NA"]
["chr1:21816074|21822202:+","chr1:21815954|21816074:+_chr1:21822202|21823489:+","UN_LDLRAD2_LS0002","LDLRAD2","protein coding gene","no",1.03,0,0,0.005,48,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:21816074|21821450","exon_intersect_chr1:21821724|21825221"]
["chr1:21822559|21822690:+","chr1:21822226|21822559:+_chr1:21822690|21823505:+","UN_HSPG2_LS0037","HSPG2","protein coding gene","no",7,0,0,0.009,82,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:21821724|21825221","exon_intersect_chr1:21821724|21825221"]
["chr1:21822559|21822726:+","chr1:21822244|21822559:+_chr1:21822726|21822909:+_chr1:21828994|21829082:+","UN_HSPG2_LS0040","HSPG2","protein coding gene","no",11.86,0,0,0.008,77,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:21821724|21825221","exon_intersect_chr1:21821724|21825221"]
["chr1:21823092|21824317:+","chr1:21822244|21823092:+_chr1:21824317|21825257:+","UN_HSPG2_LS0114","HSPG2","protein coding gene","no",7.79,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:21821724|21825221","exon_intersect_chr1:21821724|21825221"]
["chr1:21824781|21828089:+","chr1:21824077|21824781:+_chr1:21828089|21828138:+","UN_HSPG2_LS0193","HSPG2","protein coding gene","no",0.96,0,0,0.008,72,0,0,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chr1:21821724|21825221","exon_intersect_chr1:21828030|21828152"]
["chr1:218302559|218307431:+","chr1:218285342|218285455:+_chr1:218302294|218302559:+_chr1:218307431|218307632:+_chr1:218322736|218323201:+_chr1:218330948|218337983:+","UN_RRP15_LS0010","RRP15","protein coding gene","no",1.75,0,0,0.003,28,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:218302294|218302671","exon_intersect_chr1:218307431|218307632"]
["chr1:218302559|218330948:+","chr1:218285342|218285455:+_chr1:218302294|218302559:+_chr1:218330948|218337935:+","UN_RRP15_LS0011","RRP15","protein coding gene","no",2.91,0,0,0.004,34,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:218302294|218302671","exon_intersect_chr1:218330948|218337983"]
["chr1:21831570|21831659:+","chr1:21831462|21831570:+_chr1:21831659|21831797:+","UN_HSPG2_LS0240","HSPG2","protein coding gene","no",4.24,0,0,0.002,19,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:21831562|21831652","exon_intersect_chr1:21831652|21831796"]
["chr1:218494973|218510096:+","chr1:218494692|218494973:+_chr1:218510096|218510187:+_chr1:218511631|218511672:+_chr1:218520708|218520986:+_chr1:218523353|218523450:+_chr1:218525407|218525978:+","UN_C1orf143_UP_LS0002","C1orf143","lncRNA gene","no",2.71,0,0,0.004,39,0,0,"0(0)","GBM","no","NA","NA","NA","exon_intersect_chr1:218510096|218510187"]
["chr1:218510187|218525407:+","chr1:218494812|218494973:+_chr1:218510096|218510187:+_chr1:218525407|218525978:+","UN_C1orf143_LS0002","C1orf143","lncRNA gene","no",2.89,0,0,0.003,33,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:218510187|218523353","exon_intersect_chr1:218525407|218525978"]
["chr1:218598841|218599025:+","chr1:218598649|218598841:+_chr1:218599025|218599085:+_chr1:218599147|218599271:+","UN_LYPLAL1_UP_LS0006","LYPLAL1","protein coding gene","no",2.52,0,0,0.002,20,0,0,"0(0)","ESCA","no","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","NA","NA"]
["chr1:218598841|218599147:+","chr1:218598665|218598841:+_chr1:218599147|218599253:+","UN_LYPLAL1_UP_LS0007","LYPLAL1","protein coding gene","no",19.66,0,0,0.006,58,0,0,"0(0)","ESCA","no","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","NA","NA"]
["chr1:218598963|218599147:+","chr1:218598649|218598963:+_chr1:218599147|218599271:+","UN_LYPLAL1_UP_LS0011","LYPLAL1","protein coding gene","no",8.27,0,0,0.005,48,0,0,"0(0)","ESCA","no","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","NA","NA"]
["chr1:218599085|218599147:+","chr1:218598649|218598841:+_chr1:218599025|218599085:+_chr1:218599147|218599271:+","UN_LYPLAL1_UP_LS0012","LYPLAL1","protein coding gene","no",10.5,0,0,0.004,35,0,0,"0(0)","ESCA","no","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","TE_intersect_:218596113|chr1|218596113|218599632|HERVH-int:ERV1:LTR|106|-","NA","NA"]
["chr1:21868968|21869466:-","chr1:21833538|21833614:-_chr1:21833816|21833925:-_chr1:21834679|21834945:-_chr1:21835540|21835637:-_chr1:21836802|21837006:-_chr1:21838825|21839085:-_chr1:21839371|21839550:-_chr1:21839822|21840017:-_chr1:21841101|21841285:-_chr1:21841539|21841673:-_chr1:21842002|21842142:-_chr1:21842239|21842380:-_chr1:21842770|21842921:-_chr1:21843297|21843438:-_chr1:21844148|21844299:-_chr1:21846108|21846255:-_chr1:21846448|21846599:-_chr1:21847354|21847492:-_chr1:21847689|21847840:-_chr1:21847958|21848093:-_chr1:21848643|21848794:-_chr1:21848893|21849031:-_chr1:21850041|21850192:-_chr1:21850363|21850498:-_chr1:21851546|21851697:-_chr1:21851791|21851926:-_chr1:21852088|21852233:-_chr1:21852700|21852832:-_chr1:21852919|21853070:-_chr1:21854193|21854343:-_chr1:21854611|21854765:-_chr1:21854848|21854983:-_chr1:21855304|21855446:-_chr1:21855523|21855675:-_chr1:21855787|21855912:-_chr1:21857015|21857195:-_chr1:21857285|21857385:-_chr1:21859566|21859676:-_chr1:21859835|21860002:-_chr1:21860177|21860235:-_chr1:21861757|21861843:-_chr1:21861988|21862115:-_chr1:21864100|21864213:-_chr1:21864843|21865073:-_chr1:21865285|21865365:-_chr1:21865717|21865809:-_chr1:21868885|21868968:-_chr1:21869466|21869663:-_chr1:21870213|21870386:-_chr1:21870834|21870872:-_chr1:21872186|21872377:-_chr1:21872620|21872760:-_chr1:21872997|21873091:-_chr1:21873375|21873424:-_chr1:21873925|21874011:-_chr1:21874406|21874533:-_chr1:21874616|21874706:-","HSPG2_LS074","HSPG2","protein coding gene","no",11.48,0.59,0,0.001,5,0.001,1,"0(0)","UCS","yes","NA","NA","intron_intersect_chr1:21865809|21872186","intron_intersect_chr1:21865809|21872186"]
["chr1:21869663|21870213:-","chr1:21833538|21833614:-_chr1:21833816|21833925:-_chr1:21834679|21834945:-_chr1:21835540|21835637:-_chr1:21836802|21837006:-_chr1:21838825|21839085:-_chr1:21839371|21839550:-_chr1:21839822|21840017:-_chr1:21841101|21841285:-_chr1:21841539|21841673:-_chr1:21842002|21842142:-_chr1:21842239|21842380:-_chr1:21842770|21842921:-_chr1:21843297|21843438:-_chr1:21844148|21844299:-_chr1:21846108|21846255:-_chr1:21846448|21846599:-_chr1:21847354|21847492:-_chr1:21847689|21847840:-_chr1:21847958|21848093:-_chr1:21848643|21848794:-_chr1:21848893|21849031:-_chr1:21850041|21850192:-_chr1:21850363|21850498:-_chr1:21851546|21851697:-_chr1:21851791|21851926:-_chr1:21852088|21852233:-_chr1:21852700|21852832:-_chr1:21852919|21853070:-_chr1:21854193|21854343:-_chr1:21854611|21854765:-_chr1:21854848|21854983:-_chr1:21855304|21855446:-_chr1:21855523|21855675:-_chr1:21855787|21855912:-_chr1:21857015|21857195:-_chr1:21857285|21857385:-_chr1:21859566|21859676:-_chr1:21859835|21860002:-_chr1:21860177|21860235:-_chr1:21861757|21861843:-_chr1:21861988|21862115:-_chr1:21864100|21864213:-_chr1:21864843|21865073:-_chr1:21865285|21865365:-_chr1:21865717|21865809:-_chr1:21868885|21868968:-_chr1:21869466|21869663:-_chr1:21870213|21870386:-_chr1:21870834|21870872:-_chr1:21872186|21872377:-_chr1:21872620|21872760:-_chr1:21872997|21873091:-_chr1:21873375|21873424:-_chr1:21873925|21874011:-_chr1:21874406|21874533:-_chr1:21874616|21874706:-","HSPG2_LS075","HSPG2","protein coding gene","no",15.93,0.45,0,0,4,0.001,1,"0(0)","UCS","yes","NA","NA","intron_intersect_chr1:21865809|21872186","intron_intersect_chr1:21865809|21872186"]
["chr1:218699308|218712977:-","chr1:218697363|218699308:-_chr1:218712977|218713155:-_chr1:218714658|218714744:-_chr1:218717437|218717668:-","UN_RF00012_UP_LS0059","RF00012","small non-coding RNA gene","no",3.09,0,0,0.009,88,0,0,"0(0)","KIRC;LIHC","no","NA","TE_intersect_:218698526|chr1|218698526|218700684|HAL1:L1:LINE|269|-","NA","NA"]
["chr1:21870314|21870834:-","chr1:21823301|21823488:-_chr1:21823616|21823719:-_chr1:21824121|21824204:-_chr1:21824306|21824376:-_chr1:21824537|21824615:-_chr1:21824704|21824779:-_chr1:21827863|21827919:-_chr1:21828030|21828152:-_chr1:21828255|21828426:-_chr1:21828835|21829079:-_chr1:21829383|21829604:-_chr1:21829993|21830091:-_chr1:21830982|21831090:-_chr1:21831215|21831324:-_chr1:21831463|21831562:-_chr1:21831652|21831796:-_chr1:21832495|21832606:-_chr1:21832875|21832892:-_chr1:21833268|21833384:-_chr1:21833467|21833614:-_chr1:21833816|21833925:-_chr1:21834679|21834945:-_chr1:21835540|21835637:-_chr1:21836802|21837006:-_chr1:21838825|21839085:-_chr1:21839371|21839550:-_chr1:21839822|21840017:-_chr1:21841101|21841285:-_chr1:21841539|21841673:-_chr1:21842002|21842142:-_chr1:21842239|21842380:-_chr1:21842770|21842921:-_chr1:21843297|21843438:-_chr1:21844148|21844299:-_chr1:21846108|21846255:-_chr1:21846448|21846599:-_chr1:21847354|21847492:-_chr1:21847689|21847840:-_chr1:21847958|21848093:-_chr1:21848643|21848794:-_chr1:21848893|21849031:-_chr1:21850041|21850192:-_chr1:21850363|21850498:-_chr1:21851546|21851697:-_chr1:21851791|21851926:-_chr1:21852088|21852233:-_chr1:21852700|21852832:-_chr1:21852919|21853070:-_chr1:21854193|21854343:-_chr1:21854611|21854765:-_chr1:21854848|21854983:-_chr1:21855304|21855446:-_chr1:21855523|21855675:-_chr1:21855787|21855912:-_chr1:21857015|21857195:-_chr1:21857285|21857385:-_chr1:21859566|21859676:-_chr1:21859835|21860002:-_chr1:21860177|21860235:-_chr1:21861757|21861843:-_chr1:21861988|21862115:-_chr1:21864100|21864213:-_chr1:21864843|21865073:-_chr1:21865285|21865365:-_chr1:21865717|21865809:-_chr1:21868885|21868968:-_chr1:21869466|21869663:-_chr1:21870213|21870314:-_chr1:21870834|21870872:-_chr1:21872186|21872377:-_chr1:21872620|21872760:-_chr1:21872997|21873091:-_chr1:21873375|21873424:-_chr1:21873925|21874011:-_chr1:21874406|21874533:-_chr1:21874616|21874706:-","HSPG2_LS076","HSPG2","protein coding gene","no",10.01,0.3,0,0,4,0.001,1,"0(0)","UCS","yes","NA","NA","intron_intersect_chr1:21865809|21872186","intron_intersect_chr1:21865809|21872186"]
["chr1:21870872|21872186:-","chr1:21833538|21833614:-_chr1:21833816|21833925:-_chr1:21834679|21834945:-_chr1:21835540|21835637:-_chr1:21836802|21837006:-_chr1:21838825|21839085:-_chr1:21839371|21839550:-_chr1:21839822|21840017:-_chr1:21841101|21841285:-_chr1:21841539|21841673:-_chr1:21842002|21842142:-_chr1:21842239|21842380:-_chr1:21842770|21842921:-_chr1:21843297|21843438:-_chr1:21844148|21844299:-_chr1:21846108|21846255:-_chr1:21846448|21846599:-_chr1:21847354|21847492:-_chr1:21847689|21847840:-_chr1:21847958|21848093:-_chr1:21848643|21848794:-_chr1:21848893|21849031:-_chr1:21850041|21850192:-_chr1:21850363|21850498:-_chr1:21851546|21851697:-_chr1:21851791|21851926:-_chr1:21852088|21852233:-_chr1:21852700|21852832:-_chr1:21852919|21853070:-_chr1:21854193|21854343:-_chr1:21854611|21854765:-_chr1:21854848|21854983:-_chr1:21855304|21855446:-_chr1:21855523|21855675:-_chr1:21855787|21855912:-_chr1:21857015|21857195:-_chr1:21857285|21857385:-_chr1:21859566|21859676:-_chr1:21859835|21860002:-_chr1:21860177|21860235:-_chr1:21861757|21861843:-_chr1:21861988|21862115:-_chr1:21864100|21864213:-_chr1:21864843|21865073:-_chr1:21865285|21865365:-_chr1:21865717|21865809:-_chr1:21868885|21868968:-_chr1:21869466|21869663:-_chr1:21870213|21870386:-_chr1:21870834|21870872:-_chr1:21872186|21872377:-_chr1:21872620|21872760:-_chr1:21872997|21873091:-_chr1:21873375|21873424:-_chr1:21873925|21874011:-_chr1:21874406|21874533:-_chr1:21874616|21874706:-","HSPG2_LS077","HSPG2","protein coding gene","no",13.3,0.44,0,0.001,5,0.001,1,"0(0)","UCS","yes","NA","NA","exon_intersect_chr1:21872186|21872377","intron_intersect_chr1:21865809|21872186"]
["chr1:218713155|218714658:-","chr1:218697363|218699308:-_chr1:218712977|218713155:-_chr1:218714658|218714744:-_chr1:218717437|218717668:-","UN_RF00012_UP_LS0064","RF00012","small non-coding RNA gene","no",3.77,0,0,0.006,62,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr1:218714744|218717437:-","chr1:218697363|218699308:-_chr1:218712977|218713155:-_chr1:218714658|218714744:-_chr1:218717437|218717668:-","UN_RF00012_UP_LS0066","RF00012","small non-coding RNA gene","no",5.38,0,0,0.006,60,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr1:218717524|218749315:-","chr1:218698226|218699308:-_chr1:218712977|218713155:-_chr1:218714658|218714744:-_chr1:218717437|218717524:-_chr1:218749315|218749698:-_chr1:218754749|218755282:-","UN_RF00012_UP_LS0068","RF00012","small non-coding RNA gene","no",4.13,0,0,0.005,48,0,0,"0(0)","KIRC","no","TE_intersect_:218749208|chr1|218749208|218750735|HERVE_a-int:ERV1:LTR|163|-","NA","NA","NA"]
["chr1:218749698|218754749:-","chr1:218749003|218749698:-_chr1:218754749|218755270:-","UN_RF00012_UP_LS0070","RF00012","small non-coding RNA gene","no",6.02,0,0,0.011,105,0,0,"0(0)","KIRC;LIHC","no","TE_intersect_:218750732|chr1|218750732|218755012|HERVE_a-int:ERV1:LTR|177|-","TE_intersect_:218749208|chr1|218749208|218750735|HERVE_a-int:ERV1:LTR|163|-","NA","NA"]
["chr1:219086660|219092177:-","chr1:219080975|219081943:-_chr1:219086495|219086660:-_chr1:219092177|219092310:-","UN_LYPLAL1-DT_LS0001","LYPLAL1-DT","lncRNA gene","no",4.19,0,0,0.002,20,0,0,"0(0)","CHOL","no","TE_intersect_:219088450|chr1|219088450|219094763|L1MA4:L1:LINE|162|+","NA","intron_intersect_chr1:219086660|219149939","intron_intersect_chr1:219086660|219149939"]
["chr1:219320752|219323934:-","chr1:219320480|219320752:-_chr1:219323934|219324124:-_chr1:219330708|219330842:-","UN_AL360093.1_UP_LS0009","AL360093.1","lncRNA gene","no",5.92,0,0,0.006,58,0,0,"0(0)","LIHC","no","NA","TE_intersect_:219320446|chr1|219320446|219321638|L1PA5:L1:LINE|53|-","NA","NA"]
["chr1:219324677|219326806:+","chr1:219324494|219324677:+_chr1:219326806|219329557:+","UN_AL356364.1_UP_LS0026","AL356364.1","lncRNA gene","no",1.35,0,0,0.005,49,0,0,"0(0)","SKCM","no","NA","NA","NA","NA"]
["chr1:219350989|219359256:-","chr1:219350760|219350989:-_chr1:219359256|219359622:-","UN_AL360093.1_UP_LS0020","AL360093.1","lncRNA gene","no",3.01,0,0,0.007,71,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr1:219411939|219442572:-","chr1:219407667|219410267:-_chr1:219411718|219411939:-_chr1:219442572|219442642:-","UN_AL513283.1_LS0005","AL513283.1","lncRNA gene","no",7.64,0,0,0.004,36,0,0,"0(0)","ACC","no","NA","NA","exon_intersect_chr1:219442572|219442642","exon_intersect_chr1:219411718|219411941"]
["chr1:219545708|219555100:+","chr1:219545610|219545708:+_chr1:219555100|219555477:+_chr1:219557564|219557701:+","UN_AL356364.1_UP_LS0041","AL356364.1","lncRNA gene","no",14.93,0,0,0.002,20,0,0,"0(0)","UCS","no","TE_intersect_:219545012|chr1|219545012|219546884|SVA_D:SVA:Retroposon|70|+","NA","NA","NA"]
["chr1:219545708|219555402:+","chr1:219545319|219545708:+_chr1:219555402|219555477:+_chr1:219557193|219557235:+_chr1:219557564|219557701:+","UN_AL356364.1_UP_LS0042","AL356364.1","lncRNA gene","no",17.19,0,0,0.003,28,0,0,"0(0)","UCS","no","TE_intersect_:219545012|chr1|219545012|219546884|SVA_D:SVA:Retroposon|70|+","TE_intersect_:219555312|chr1|219555312|219555444|OldhAT1:hAT-Ac:DNA|307|+","NA","NA"]
["chr1:219545825|219555100:+","chr1:219545011|219545825:+_chr1:219555100|219555477:+_chr1:219557564|219557701:+","UN_AL356364.1_UP_LS0047","AL356364.1","lncRNA gene","no",10.3,0,0,0.002,15,0,0,"0(0)","UCS","no","TE_intersect_:219545012|chr1|219545012|219546884|SVA_D:SVA:Retroposon|70|+","NA","NA","NA"]
["chr1:219553035|219554159:+","chr1:219552323|219553035:+_chr1:219554159|219554492:+_chr1:219555100|219555477:+_chr1:219557193|219557235:+_chr1:219557564|219557701:+","UN_AL356364.1_UP_LS0060","AL356364.1","lncRNA gene","no",4.42,0,0,0.002,17,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:219685732|219737759:-","chr1:219685424|219685732:-_chr1:219737759|219737911:-_chr1:219746171|219746442:-","UN_SLC30A10_LS0004","SLC30A10","protein coding gene","no",3.15,0,0,0.009,82,0,0,"0(0)","SKCM","no","TE_intersect_:219737418|chr1|219737418|219738104|L2:L2:LINE|265|+","NA","intron_intersect_chr1:219685732|219761789","intron_intersect_chr1:219685732|219761789"]
["chr1:219737911|219746171:-","chr1:219685424|219685732:-_chr1:219737759|219737911:-_chr1:219746171|219746442:-","UN_SLC30A10_LS0012","SLC30A10","protein coding gene","no",4.44,0,0,0.007,63,0,0,"0(0)","SKCM","no","NA","TE_intersect_:219737418|chr1|219737418|219738104|L2:L2:LINE|265|+","intron_intersect_chr1:219685732|219761789","intron_intersect_chr1:219685732|219761789"]
["chr1:219797298|219805324:-","chr1:219797142|219797298:-_chr1:219805324|219805423:-_chr1:219806649|219806791:-","UN_SLC30A10_LS0035","SLC30A10","protein coding gene","no",7.81,0,0,0.009,91,0,0,"0(0)","SKCM;UCS","no","NA","TE_intersect_:219797175|chr1|219797175|219797407|MIRb:MIR:SINE|307|+","intron_intersect_chr1:219792055|219817663","intron_intersect_chr1:219792055|219817663"]
["chr1:219805423|219806649:-","chr1:219797142|219797298:-_chr1:219805324|219805423:-_chr1:219806649|219806791:-","UN_SLC30A10_LS0036","SLC30A10","protein coding gene","no",8.03,0,0,0.011,107,0,0,"0(0)","GBM;UCS","no","NA","NA","intron_intersect_chr1:219792055|219817663","intron_intersect_chr1:219792055|219817663"]
["chr1:21980864|22005488:-","chr1:21980765|21980864:-_chr1:22005488|22007013:-_chr1:22007375|22007563:-","UN_AL590556.2_UP_LS0003","AL590556.2","pseudogene","no",141.9,0,0,0.002,17,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:22005447|22005544","exon_intersect_chr1:21980824|21980921"]
["chr1:21986683|22005447:+","chr1:21976983|21977082:+_chr1:21978369|21978454:+_chr1:21980824|21980921:+_chr1:21981038|21981172:+_chr1:21983694|21983830:+_chr1:21984189|21984331:+_chr1:21986531|21986683:+_chr1:22005447|22005544:+_chr1:22005662|22005796:+_chr1:22006878|22007014:+_chr1:22007373|22007515:+_chr1:22009705|22009857:+_chr1:22012450|22015195:+","AL590556.3_LS004","AL590556.3","lncRNA gene","no",867.73,5.35,0,0.003,27,0.007,5,"0(0)","PAAD","yes","NA","NA","intron_intersect_chr1:21986683|21986964","exon_intersect_chr1:22005447|22005544"]
["chr1:220200939|220202276:-","chr1:220200764|220200939:-_chr1:220202276|220202374:-_chr1:220205907|220206006:-_chr1:220210388|220210489:-_chr1:220210801|220210876:-_chr1:220210955|220211002:-_chr1:220212887|220212968:-_chr1:220213856|220213979:-_chr1:220232799|220232863:-_chr1:220272223|220272447:-","UN_RAB3GAP2_LS0022","RAB3GAP2","protein coding gene","no",2.19,0,0,0.002,15,0,0,"0(0)","DLBC","no","NA","TE_intersect_:220200872|chr1|220200872|220200979|L2b:L2:LINE|377|-","exon_intersect_chr1:220202276|220202374","intron_intersect_chr1:220200676|220202276"]
["chr1:220429329|220432053:+","chr1:220429319|220429329:+_chr1:220432053|220432639:+_chr1:220435624|220435774:+","UN_AC096644.3_UP_LS0001","AC096644.3","pseudogene","no",5.17,0,0,0.001,14,0,0,"0(0)","KICH;UCS","no","NA","TE_intersect_:220431828|chr1|220431828|220432371|MLT1F2:ERVL-MaLR:LTR|251|+","NA","NA"]
["chr1:220460862|220466714:-","chr1:220460422|220460862:-_chr1:220466714|220467568:-","UN_AC096644.2_UP_LS0004","AC096644.2","pseudogene","no",4.57,0,0,0.006,62,0,0,"0(0)","ESCA;HNSC","no","TE_intersect_:220465686|chr1|220465686|220467569|SVA_D:SVA:Retroposon|33|-","NA","NA","NA"]
["chr1:220460862|220466754:-","chr1:220460434|220460862:-_chr1:220466754|220467580:-","UN_AC096644.2_UP_LS0005","AC096644.2","pseudogene","no",4.44,0,0,0.008,76,0,0,"0(0)","HNSC","no","TE_intersect_:220465686|chr1|220465686|220467569|SVA_D:SVA:Retroposon|33|-","NA","NA","NA"]
["chr1:220460862|220466831:-","chr1:220460422|220460862:-_chr1:220466831|220467568:-","UN_AC096644.2_UP_LS0006","AC096644.2","pseudogene","no",4.56,0,0,0.005,47,0,0,"0(0)","ESCA","no","TE_intersect_:220465686|chr1|220465686|220467569|SVA_D:SVA:Retroposon|33|-","NA","NA","NA"]
["chr1:220463076|220463735:+","chr1:220462857|220463076:+_chr1:220463735|220465686:+","UN_PRELID3BP1_UP_LS0001","PRELID3BP1","pseudogene","no",1.65,0,0,0.006,62,0,0,"0(0)","STAD","no","TE_intersect_:220462815|chr1|220462815|220464050|MER52C:ERV1:LTR|131|+","TE_intersect_:220462815|chr1|220462815|220464050|MER52C:ERV1:LTR|131|+","NA","NA"]
["chr1:220466269|220466397:+","chr1:220465667|220466269:+_chr1:220466397|220467699:+","UN_PRELID3BP1_UP_LS0003","PRELID3BP1","pseudogene","no",2.32,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:220465686|chr1|220465686|220467569|SVA_D:SVA:Retroposon|33|-","TE_intersect_:220465686|chr1|220465686|220467569|SVA_D:SVA:Retroposon|33|-","NA","NA"]
["chr1:220466407|220466535:-","chr1:220465671|220466407:-_chr1:220466535|220467623:-","UN_AC096644.2_UP_LS0012","AC096644.2","pseudogene","no",2.23,0,0,0.002,18,0,0,"0(0)","ESCA","no","TE_intersect_:220465686|chr1|220465686|220467569|SVA_D:SVA:Retroposon|33|-","TE_intersect_:220465686|chr1|220465686|220467569|SVA_D:SVA:Retroposon|33|-","NA","NA"]
["chr1:220511634|220526883:+","chr1:220511404|220511634:+_chr1:220526883|220527244:+","UN_MARK1_UP_LS0003","MARK1","protein coding gene","no",3.41,0,0,0.008,81,0,0,"0(0)","ESCA;HNSC","no","NA","NA","NA","NA"]
["chr1:22091687|22092623:-","chr1:22090820|22091476:-_chr1:22091533|22091687:-_chr1:22092623|22092838:-","UN_CDC42_LS0026","CDC42","protein coding gene","no",1.62,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:22091428|22092946","exon_intersect_chr1:22091428|22092946"]
["chr1:221414030|221417280:-","chr1:221413875|221414030:-_chr1:221417280|221417393:-_chr1:221440714|221440849:-","UN_C1orf140_UP_LS0002","C1orf140","lncRNA gene","no",5.45,0,0,0.02,196,0,0,"0(0)","GBM;KIRC;KIRP;LGG","no","TE_intersect_:221417032|chr1|221417032|221417369|L1ME3G:L1:LINE|300|-","TE_intersect_:221413909|chr1|221413909|221414072|AluSp:Alu:SINE|117|+","NA","NA"]
["chr1:221417393|221440714:-","chr1:221413875|221414030:-_chr1:221417280|221417393:-_chr1:221440714|221440849:-","UN_C1orf140_UP_LS0006","C1orf140","lncRNA gene","no",2.84,0,0,0.018,173,0,0,"0(0)","GBM;KIRC;KIRP;LGG","no","NA","NA","NA","NA"]
["chr1:221489530|221492262:-","chr1:221489037|221489530:-_chr1:221492262|221492362:-","UN_C1orf140_UP_LS0008","C1orf140","lncRNA gene","no",9.76,0,0,0.006,53,0,0,"0(0)","LGG","no","TE_intersect_:221492083|chr1|221492083|221492413|Tigger2:TcMar-Tigger:DNA|116|-","NA","NA","NA"]
["chr1:221497296|221508278:-","chr1:221488730|221489530:-_chr1:221492262|221492326:-_chr1:221497083|221497296:-_chr1:221508278|221508360:-","UN_C1orf140_UP_LS0013","C1orf140","lncRNA gene","no",2.35,0,0,0.003,30,0,0,"0(0)","LGG","no","TE_intersect_:221507900|chr1|221507900|221509958|L1PA15-16:L1:LINE|110|+","TE_intersect_:221497225|chr1|221497225|221497351|MIRb:MIR:SINE|312|-","NA","NA"]
["chr1:221706466|221714418:-","chr1:221701424|221702677:-_chr1:221706095|221706466:-_chr1:221714418|221714510:-","UN_DUSP10_LS0010","DUSP10","protein coding gene","no",2.68,0,0,0.014,134,0,0,"0(0)","BRCA;CHOL;SKCM","no","TE_intersect_:221714228|chr1|221714228|221714848|LTR9:ERV1:LTR|117|+","NA","intron_intersect_chr1:221711816|221736843","intron_intersect_chr1:221706466|221711637"]
["chr1:22172230|22188826:+","chr1:22163362|22163496:+_chr1:22172055|22172230:+_chr1:22188826|22188935:+","UN_MIR4418_UP_LS0011","MIR4418","small non-coding RNA gene","no",4.07,0,0,0.008,80,0,0,"0(0)","HNSC","no","NA","NA","NA","NA"]
["chr1:221739787|221741306:-","chr1:221727638|221739787:-_chr1:221741306|221742157:-","UN_DUSP10_LS0023","DUSP10","protein coding gene","no",3.12,0.03,0,0.003,32,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:221739787|221741981","intron_intersect_chr1:221739787|221741981"]
["chr1:221739787|221741714:-","chr1:221701483|221702677:-_chr1:221706095|221706466:-_chr1:221738934|221739787:-_chr1:221741714|221742089:-","UN_DUSP10_LS0024","DUSP10","protein coding gene","no",1.94,0,0,0.018,177,0,0,"0(0)","ACC;LAML;SKCM","no","NA","NA","intron_intersect_chr1:221739787|221741981","intron_intersect_chr1:221739787|221741981"]
["chr1:221774679|221778404:-","chr1:221773391|221774679:-_chr1:221778404|221778821:-","UN_DUSP10_UP_LS0002","DUSP10","protein coding gene","no",2.22,0,0,0.001,14,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:221915935|221918592:-","chr1:221811358|221812719:-_chr1:221913762|221913858:-_chr1:221914423|221914531:-_chr1:221915789|221915935:-_chr1:221918592|221918712:-_chr1:221969290|221971576:-","UN_LINC02257_LS0012","LINC02257","lncRNA gene","no",1.61,0,0,0.012,118,0,0,"0(0)","LUAD","no","TE_intersect_:221918435|chr1|221918435|221918738|AluSx3:Alu:SINE|148|+","TE_intersect_:221915691|chr1|221915691|221915982|L2a:L2:LINE|285|+","exon_intersect_chr1:221918592|221918712","intron_intersect_chr1:221914531|221918592"]
["chr1:221916015|221918592:-","chr1:221835837|221840453:-_chr1:221913762|221913858:-_chr1:221914423|221914531:-_chr1:221915789|221916015:-_chr1:221918592|221918712:-_chr1:221976287|221977783:-","UN_LINC02257_LS0013","LINC02257","lncRNA gene","no",2.19,0,0,0.019,180,0,0,"0(0)","LUAD;OV;SARC","no","TE_intersect_:221918435|chr1|221918435|221918738|AluSx3:Alu:SINE|148|+","NA","exon_intersect_chr1:221918592|221918712","intron_intersect_chr1:221914531|221918592"]
["chr1:221918712|222058414:-","chr1:221811788|221812719:-_chr1:221913762|221913858:-_chr1:221914423|221914531:-_chr1:221918592|221918712:-_chr1:222058414|222058678:-_chr1:222059006|222059149:-_chr1:222064685|222064763:-","UN_LINC01655_UP_LS0002","LINC01655","lncRNA gene","no",3.78,0,0,0.028,266,0,0,"0(0)","BRCA;ESCA;PAAD;PCPG;SARC;STAD","no","NA","TE_intersect_:221918435|chr1|221918435|221918738|AluSx3:Alu:SINE|148|+","exon_intersect_chr1:222058414|222058678","intron_intersect_chr1:221918712|221966341"]
["chr1:221966502|221972438:+","chr1:221966248|221966502:+_chr1:221972438|221972706:+","UN_LINC02474_LS0005","LINC02474","lncRNA gene","no",6.71,0,0,0.004,41,0,0,"0(0)","OV","no","TE_intersect_:221966356|chr1|221966356|221969342|HERVH-int:ERV1:LTR|96|+","TE_intersect_:221971984|chr1|221971984|221972731|MER4E1:ERV1:LTR|86|+","intron_intersect_chr1:221966502|221968348","intron_intersect_chr1:221968496|221978360"]
["chr1:221968496|221972438:+","chr1:221966410|221966502:+_chr1:221968348|221968496:+_chr1:221972438|221972900:+","UN_LINC02474_LS0014","LINC02474","lncRNA gene","no",3.69,0,0,0.016,154,0,0,"0(0)","BLCA;LUAD;OV;STAD","no","TE_intersect_:221966356|chr1|221966356|221969342|HERVH-int:ERV1:LTR|96|+","TE_intersect_:221971984|chr1|221971984|221972731|MER4E1:ERV1:LTR|86|+","intron_intersect_chr1:221968496|221978360","intron_intersect_chr1:221968496|221978360"]
["chr1:221976389|221978360:-","chr1:221835657|221840453:-_chr1:221913762|221913858:-_chr1:221914423|221914531:-_chr1:221918592|221918712:-_chr1:221976287|221976389:-_chr1:221978360|221979394:-","UN_LINC02474_LS0026","LINC02474","lncRNA gene","no",1.89,0,0,0.002,23,0,0,"0(0)","OV","no","TE_intersect_:221975431|chr1|221975431|221978506|HERVH-int:ERV1:LTR|92|-","TE_intersect_:221975431|chr1|221975431|221978506|HERVH-int:ERV1:LTR|92|-","exon_intersect_chr1:221978360|221978523","intron_intersect_chr1:221968496|221978360"]
["chr1:221976453|221983000:+","chr1:221975168|221976453:+_chr1:221983000|221983143:+_chr1:222015340|222017662:+","UN_LINC02474_LS0027","LINC02474","lncRNA gene","no",2,0,0,0.006,53,0,0,"0(0)","LUAD","no","TE_intersect_:221975431|chr1|221975431|221978506|HERVH-int:ERV1:LTR|92|-","NA","intron_intersect_chr1:221968496|221978360","exon_intersect_chr1:221983000|221983143"]
["chr1:221976575|221978360:-","chr1:221835183|221840453:-_chr1:221913762|221913858:-_chr1:221914423|221914531:-_chr1:221918592|221918712:-_chr1:221976287|221976575:-_chr1:221978360|221978530:-","UN_LINC02474_LS0028","LINC02474","lncRNA gene","no",1.54,0,0,0.004,43,0,0,"0(0)","OV","no","TE_intersect_:221975431|chr1|221975431|221978506|HERVH-int:ERV1:LTR|92|-","TE_intersect_:221975431|chr1|221975431|221978506|HERVH-int:ERV1:LTR|92|-","exon_intersect_chr1:221978360|221978523","intron_intersect_chr1:221968496|221978360"]
["chr1:221976718|222015340:+","chr1:221973572|221976235:+_chr1:221976335|221976718:+_chr1:222015340|222017756:+","UN_CICP13_UP_LS0007","CICP13","pseudogene","no",1,0,0,0.002,19,0,0,"0(0)","OV","no","TE_intersect_:221975431|chr1|221975431|221978506|HERVH-int:ERV1:LTR|92|-","TE_intersect_:222015319|chr1|222015319|222015451|FLAM_C:Alu:SINE|197|-","intron_intersect_chr1:221968496|221978360","NA"]
["chr1:221978518|222058414:-","chr1:221836814|221840453:-_chr1:221913762|221913858:-_chr1:221914423|221914531:-_chr1:221918592|221918712:-_chr1:221976287|221976575:-_chr1:221978360|221978518:-_chr1:222058414|222058678:-_chr1:222064685|222064763:-","UN_LINC01655_UP_LS0004","LINC01655","lncRNA gene","no",1.9,0,0,0.015,145,0,0,"0(0)","BRCA;PAAD;STAD","no","NA","TE_intersect_:221978508|chr1|221978508|221978957|LTR7:ERV1:LTR|67|-","exon_intersect_chr1:222058414|222058678","exon_intersect_chr1:221978360|221978523"]
["chr1:221983143|222015340:+","chr1:221975168|221976453:+_chr1:221983000|221983143:+_chr1:222015340|222017662:+","UN_CICP13_UP_LS0009","CICP13","pseudogene","no",5.42,0,0,0.005,44,0,0,"0(0)","LUAD","no","NA","TE_intersect_:222015319|chr1|222015319|222015451|FLAM_C:Alu:SINE|197|-","intron_intersect_chr1:221983143|221984054","NA"]
["chr1:221997980|222058414:-","chr1:221996242|221997980:-_chr1:222058414|222058678:-_chr1:222059006|222059149:-_chr1:222064685|222064763:-","UN_LINC02257_UP_LS0001","LINC02257","lncRNA gene","no",2.77,0,0,0.019,180,0,0,"0(0)","BRCA;ESCA;PAAD;SARC","no","NA","TE_intersect_:221997700|chr1|221997700|221998013|AluSz:Alu:SINE|144|+","exon_intersect_chr1:222058414|222058678","NA"]
["chr1:222033671|222058414:-","chr1:222028188|222028584:-_chr1:222033022|222033103:-_chr1:222033547|222033671:-_chr1:222058414|222058678:-_chr1:222059006|222059149:-_chr1:222064685|222064763:-","UN_LINC02257_UP_LS0009","LINC02257","lncRNA gene","no",2.79,0,0,0.009,88,0,0,"0(0)","SARC","no","NA","TE_intersect_:222033633|chr1|222033633|222033791|L3b:CR1:LINE|351|+","exon_intersect_chr1:222058414|222058678","NA"]
["chr1:222230366|222233622:+","chr1:222229210|222230366:+_chr1:222233622|222234072:+","UN_AL356108.1_LS0015","AL356108.1","lncRNA gene","no",8.93,0,0,0.003,30,0,0,"0(0)","OV","no","NA","TE_intersect_:222233371|chr1|222233371|222234098|MER72:ERV1:LTR|140|+","intron_intersect_chr1:222218489|222261833","intron_intersect_chr1:222218489|222261833"]
["chr1:222475152|222475814:-","chr1:222475022|222475152:-_chr1:222475814|222475998:-","UN_AL513314.1_UP_LS0011","AL513314.1","lncRNA gene","no",1.39,0,0,0.004,37,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr1:222486121|222486693:-","chr1:222471922|222477153:-_chr1:222477247|222477304:-_chr1:222479368|222479558:-_chr1:222486057|222486121:-_chr1:222486693|222486749:-_chr1:222487175|222487316:-_chr1:222487567|222487697:-_chr1:222489578|222489700:-","UN_AL513314.2_LS0005","AL513314.2","lncRNA gene","no",0.44,0.01,0,0.009,89,0.009,6,"0(0)","TGCT","no","TE_intersect_:222486558|chr1|222486558|222486809|MER1A:hAT-Charlie:DNA|108|-","NA","intron_intersect_chr1:222486207|222489586","exon_intersect_chr1:222486057|222486207"]
["chr1:222486121|222487567:-","chr1:222471915|222477153:-_chr1:222477247|222477304:-_chr1:222479368|222479558:-_chr1:222486057|222486121:-_chr1:222487567|222489700:-","UN_AL513314.2_LS0006","AL513314.2","lncRNA gene","no",0.21,0,0,0.003,31,0,0,"0(0)","TGCT","no","TE_intersect_:222486966|chr1|222486966|222488651|SVA_D:SVA:Retroposon|92|+","NA","intron_intersect_chr1:222486207|222489586","exon_intersect_chr1:222486057|222486207"]
["chr1:222487905|222488263:+","chr1:222486815|222487905:+_chr1:222488263|222489541:+","UN_AL513314.2_LS0018","AL513314.2","lncRNA gene","no",2.8,0,0,0.001,14,0,0,"0(0)","TGCT","no","TE_intersect_:222486966|chr1|222486966|222488651|SVA_D:SVA:Retroposon|92|+","TE_intersect_:222486966|chr1|222486966|222488651|SVA_D:SVA:Retroposon|92|+","intron_intersect_chr1:222486207|222489586","intron_intersect_chr1:222486207|222489586"]
["chr1:222487905|222488743:+","chr1:222487681|222487905:+_chr1:222488743|222489386:+","UN_AL513314.2_LS0020","AL513314.2","lncRNA gene","no",0.82,0,0,0.003,32,0,0,"0(0)","OV","no","TE_intersect_:222486966|chr1|222486966|222488651|SVA_D:SVA:Retroposon|92|+","TE_intersect_:222488404|chr1|222488404|222489387|SVA_D:SVA:Retroposon|60|+","intron_intersect_chr1:222486207|222489586","intron_intersect_chr1:222486207|222489586"]
["chr1:222488082|222488788:+","chr1:222487657|222487905:+_chr1:222487956|222488082:+_chr1:222488788|222489411:+","UN_AL513314.2_LS0022","AL513314.2","lncRNA gene","no",1.4,0,0,0.001,13,0,0,"0(0)","ESCA","no","TE_intersect_:222486966|chr1|222486966|222488651|SVA_D:SVA:Retroposon|92|+","TE_intersect_:222488404|chr1|222488404|222489387|SVA_D:SVA:Retroposon|60|+","intron_intersect_chr1:222486207|222489586","intron_intersect_chr1:222486207|222489586"]
["chr1:222488435|222488612:+","chr1:222486821|222488435:+_chr1:222488612|222489373:+","UN_AL513314.2_LS0023","AL513314.2","lncRNA gene","no",1.66,0,0,0.002,19,0,0,"0(0)","TGCT","no","TE_intersect_:222488404|chr1|222488404|222489387|SVA_D:SVA:Retroposon|60|+","TE_intersect_:222488404|chr1|222488404|222489387|SVA_D:SVA:Retroposon|60|+","intron_intersect_chr1:222486207|222489586","intron_intersect_chr1:222486207|222489586"]
["chr1:222511809|222513964:-","chr1:222471927|222477153:-_chr1:222477247|222477304:-_chr1:222479368|222479558:-_chr1:222486057|222486121:-_chr1:222487567|222490220:-_chr1:222492074|222492197:-_chr1:222501469|222501533:-_chr1:222504366|222504601:-_chr1:222510169|222510658:-_chr1:222511751|222511809:-_chr1:222513964|222514029:-_chr1:222519623|222519873:-","UN_AL592148.2_LS0002","AL592148.2","pseudogene","no",1.36,0,0,0.003,24,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:222513964|222514029","intron_intersect_chr1:222510658|222513964"]
["chr1:222654793|222657922:+","chr1:222621416|222624854:+_chr1:222627575|222630389:+_chr1:222632165|222632326:+_chr1:222633104|222633249:+_chr1:222645554|222645685:+_chr1:222648829|222648850:+_chr1:222650292|222650380:+_chr1:222650634|222650711:+_chr1:222650793|222650903:+_chr1:222651977|222652048:+_chr1:222652228|222652332:+_chr1:222653008|222653130:+_chr1:222653228|222653339:+_chr1:222654243|222654298:+_chr1:222654389|222654479:+_chr1:222654655|222654793:+_chr1:222657922|222657972:+_chr1:222658722|222658823:+_chr1:222659453|222659513:+_chr1:222659622|222659657:+_chr1:222659734|222659801:+_chr1:222659906|222659993:+","UN_MIA3_LS0024","MIA3","protein coding gene","no",10.05,0,0,0.002,16,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:222654793|222658642","intron_intersect_chr1:222654793|222658642"]
["chr1:222657972|222658722:+","chr1:222621416|222624854:+_chr1:222627575|222630389:+_chr1:222632165|222632326:+_chr1:222633104|222633249:+_chr1:222645554|222645685:+_chr1:222648829|222648850:+_chr1:222650292|222650380:+_chr1:222650634|222650711:+_chr1:222650793|222650903:+_chr1:222651977|222652048:+_chr1:222652228|222652332:+_chr1:222653008|222653130:+_chr1:222653228|222653339:+_chr1:222654243|222654298:+_chr1:222654389|222654479:+_chr1:222654655|222654793:+_chr1:222657922|222657972:+_chr1:222658722|222658823:+_chr1:222659453|222659513:+_chr1:222659622|222659657:+_chr1:222659734|222659801:+_chr1:222659906|222659993:+","UN_MIA3_LS0025","MIA3","protein coding gene","no",13.02,0,0,0.001,13,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:222654793|222658642","exon_intersect_chr1:222658642|222658823"]
["chr1:222662529|222662888:+","chr1:222662083|222662124:+_chr1:222662253|222662529:+_chr1:222662888|222664148:+_chr1:222665309|222668044:+","UN_MIA3_LS0033","MIA3","protein coding gene","no",1.87,0,0,0.004,42,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:222662508|222662888","exon_intersect_chr1:222662888|222663031"]
["chr1:222694263|222694475:-","chr1:222668013|222669989:-_chr1:222670133|222670250:-_chr1:222673313|222673435:-_chr1:222676096|222676218:-_chr1:222686930|222687036:-_chr1:222687595|222687658:-_chr1:222693789|222693843:-_chr1:222694210|222694263:-_chr1:222694475|222694817:-","UN_AIDA_LS0008","AIDA","protein coding gene","no",20.52,0,0,0.003,28,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:222694263|222703148","intron_intersect_chr1:222694263|222703148"]
["chr1:22283382|22285184:-","chr1:22278628|22283382:-_chr1:22285184|22285587:-","UN_WNT4_UP_LS0008","WNT4","protein coding gene","no",3.39,0,0,0.002,21,0,0,"0(0)","ACC","no","NA","TE_intersect_:22282975|chr1|22282975|22283469|MLT1K:ERVL-MaLR:LTR|242|+","NA","NA"]
["chr1:223095992|223096401:-","chr1:223091823|223095992:-_chr1:223096401|223098409:-_chr1:223098690|223098976:-_chr1:223103123|223103356:-","UN_AIDA_UP_LS0033","AIDA","protein coding gene","no",2.23,0,0,0.001,11,0,0,"0(0)","KICH","no","TE_intersect_:223096173|chr1|223096173|223096584|L1PREC2:L1:LINE|125|-","TE_intersect_:223095853|chr1|223095853|223096161|AluJo:Alu:SINE|188|-","NA","NA"]
["chr1:223313341|223315377:+","chr1:223313230|223313341:+_chr1:223315377|223315671:+","UN_SUSD4_LS0015","SUSD4","protein coding gene","no",2.85,0,0,0.001,14,0,0,"0(0)","ACC","no","TE_intersect_:223313003|chr1|223313003|223313541|MER77B:ERVL:LTR|220|+","TE_intersect_:223315050|chr1|223315050|223315700|LTR8A:ERV1:LTR|194|+","intron_intersect_chr1:223292651|223358825","intron_intersect_chr1:223292651|223358825"]
["chr1:223626105|223626989:-","chr1:223541599|223541859:-_chr1:223543108|223543166:-_chr1:223544067|223544183:-_chr1:223544772|223549382:-_chr1:223550960|223551017:-_chr1:223553832|223553900:-_chr1:223558131|223558167:-_chr1:223609153|223609364:-_chr1:223612246|223612257:-_chr1:223615970|223620266:-_chr1:223622815|223622900:-_chr1:223625805|223625888:-_chr1:223626025|223626105:-_chr1:223626989|223627157:-_chr1:223628662|223628780:-_chr1:223654330|223654399:-_chr1:223665410|223665769:-","UN_CAPN8_LS0048","CAPN8","protein coding gene","no",1.51,0,0,0.004,35,0.003,2,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:223626989|223627157","intron_intersect_chr1:223625888|223626989"]
["chr1:223654399|223677938:-","chr1:223541648|223541859:-_chr1:223543108|223543166:-_chr1:223544067|223544183:-_chr1:223544772|223549382:-_chr1:223550960|223551017:-_chr1:223553832|223553900:-_chr1:223558131|223558167:-_chr1:223609153|223609364:-_chr1:223612246|223612257:-_chr1:223615970|223616145:-_chr1:223619293|223619453:-_chr1:223620192|223620266:-_chr1:223622815|223622900:-_chr1:223625805|223625888:-_chr1:223626989|223627157:-_chr1:223628009|223628142:-_chr1:223628662|223628780:-_chr1:223654330|223654399:-_chr1:223677938|223678071:-","UN_SNRPEP10_UP_LS0002","SNRPEP10","pseudogene","no",1.71,0,0,0.003,28,0,0,"0(0)","KICH","no","TE_intersect_:223677851|chr1|223677851|223678091|L2a:L2:LINE|294|+","NA","NA","intron_intersect_chr1:223654399|223665410"]
["chr1:223678082|223690772:-","chr1:223541648|223541859:-_chr1:223543108|223543166:-_chr1:223544067|223544183:-_chr1:223544772|223544850:-_chr1:223545231|223545299:-_chr1:223549318|223549382:-_chr1:223550960|223551017:-_chr1:223553832|223553900:-_chr1:223558131|223558167:-_chr1:223609153|223609364:-_chr1:223612246|223612257:-_chr1:223615970|223616145:-_chr1:223619293|223619453:-_chr1:223620192|223620266:-_chr1:223622815|223622900:-_chr1:223625805|223625888:-_chr1:223626989|223627157:-_chr1:223628009|223628142:-_chr1:223628662|223628780:-_chr1:223654330|223654399:-_chr1:223677938|223678082:-_chr1:223690772|223690828:-_chr1:223719090|223719591:-","UN_CAPN8_UP_LS0002","CAPN8","protein coding gene","no",1.98,0,0,0.004,40,0,0,"0(0)","KICH","no","NA","TE_intersect_:223677851|chr1|223677851|223678091|L2a:L2:LINE|294|+","NA","NA"]
["chr1:223705429|223706240:+","chr1:223705159|223705429:+_chr1:223706240|223707036:+","UN_CAPN2_LS0003","CAPN2","protein coding gene","no",3.16,0,0,0.002,21,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:223701831|223712332","intron_intersect_chr1:223701831|223712332"]
["chr1:223806947|223809107:-","chr1:223795838|223796590:-_chr1:223798215|223798677:-_chr1:223799899|223800047:-_chr1:223800700|223800810:-_chr1:223802116|223802344:-_chr1:223802731|223802895:-_chr1:223803271|223803417:-_chr1:223804174|223804348:-_chr1:223806846|223806947:-_chr1:223809107|223809164:-_chr1:223810431|223810513:-_chr1:223814240|223814328:-","UN_TP53BP2_LS0025","TP53BP2","protein coding gene","yes",3.17,0,0,0.002,15,0,0,"0(0)","LAML","no","TE_intersect_:223809084|chr1|223809084|223809165|AluJr:Alu:SINE|222|-","NA","intron_intersect_chr1:223806947|223810431","intron_intersect_chr1:223806947|223810431"]
["chr1:223945706|224030704:-","chr1:223945532|223945706:-_chr1:224030704|224030796:-_chr1:224034954|224035053:-","UN_ACTBP11_UP_LS0002","ACTBP11","pseudogene","no",3.28,0,0,0.003,27,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:224030704|224030796","NA"]
["chr1:224151824|224192836:-","chr1:224151568|224151824:-_chr1:224192836|224192928:-_chr1:224327318|224327356:-","UN_RN7SKP49_UP_LS0001","RN7SKP49","small non-coding RNA gene","no",4.68,0,0,0.003,28,0,0,"0(0)","GBM","no","TE_intersect_:224192772|chr1|224192772|224193089|AluSx:Alu:SINE|117|+","TE_intersect_:224151760|chr1|224151760|224152054|AluSx:Alu:SINE|133|+","exon_intersect_chr1:224192332|224193441","intron_intersect_chr1:224134365|224153142"]
["chr1:224165919|224192823:+","chr1:224165871|224165919:+_chr1:224192823|224193441:+","UN_AC092809.4_UP_LS0001","AC092809.4","lncRNA gene","no",7.83,0,0,0.008,72,0,0,"0(0)","GBM","no","TE_intersect_:224165868|chr1|224165868|224166172|AluSx1:Alu:SINE|92|+","TE_intersect_:224192772|chr1|224192772|224193089|AluSx:Alu:SINE|117|+","NA","exon_intersect_chr1:224192332|224193441"]
["chr1:22429014|22489880:+","chr1:22428863|22429014:+_chr1:22489880|22490645:+_chr1:22491400|22491533:+_chr1:22501492|22501684:+_chr1:22502299|22502441:+_chr1:22506049|22506241:+_chr1:22508001|22508137:+_chr1:22508530|22508731:+_chr1:22509100|22509233:+_chr1:22511179|22511347:+_chr1:22511676|22512134:+_chr1:22512924|22513130:+_chr1:22517300|22517464:+_chr1:22520061|22520275:+_chr1:22521496|22521658:+_chr1:22522377|22522463:+_chr1:22524218|22524444:+_chr1:22526202|22531095:+","ZBTB40_LS001","ZBTB40","protein coding gene","no",1.54,0,0,0.032,303,0,0,"0(0)","ESCA;OV;SKCM;STAD;TGCT;UCS","yes","NA","NA","NA","exon_intersect_chr1:22489880|22490645"]
["chr1:224356993|224360452:+","chr1:224356921|224356993:+_chr1:224360452|224360563:+_chr1:224365879|224365991:+_chr1:224371283|224371423:+_chr1:224375795|224375998:+","UN_CNIH4_LS0003","CNIH4","protein coding gene","no",3.06,0,0,0.004,43,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:224356850|224357612","intron_intersect_chr1:224357612|224360495"]
["chr1:224434862|224451871:+","chr1:224433763|224433924:+_chr1:224434249|224434427:+_chr1:224434484|224434862:+_chr1:224451871|224451974:+_chr1:224454278|224454343:+_chr1:224456859|224456921:+_chr1:224459143|224460688:+","UN_CNIH3_LS0003","CNIH3","protein coding gene","no",3.19,0,0,0.007,69,0,0,"0(0)","LGG","no","NA","TE_intersect_:224451835|chr1|224451835|224452152|Charlie8:hAT-Charlie:DNA|267|+","intron_intersect_chr1:224434862|224434912","intron_intersect_chr1:224437033|224513688"]
["chr1:224434862|224513204:+","chr1:224434296|224434862:+_chr1:224513204|224513310:+_chr1:224515741|224515876:+_chr1:224521000|224521737:+","UN_CNIH3_LS0011","CNIH3","protein coding gene","no",2.34,0,0,0.003,30,0,0,"0(0)","GBM","no","NA","TE_intersect_:224513166|chr1|224513166|224513479|AluJb:Alu:SINE|144|-","intron_intersect_chr1:224434862|224434912","intron_intersect_chr1:224437033|224513688"]
["chr1:224435187|224459124:+","chr1:224434925|224435187:+_chr1:224459124|224460694:+","UN_CNIH3_LS0023","CNIH3","protein coding gene","no",2.14,0,0,0.002,17,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr1:224435187|224435717","intron_intersect_chr1:224437033|224513688"]
["chr1:224439774|224451871:+","chr1:224434676|224434862:+_chr1:224439634|224439774:+_chr1:224451871|224451974:+_chr1:224454278|224454343:+_chr1:224456854|224456921:+_chr1:224459197|224460699:+","UN_CNIH3_LS0035","CNIH3","protein coding gene","no",2.38,0.04,0,0.007,67,0.001,1,"0(0)","LGG","no","TE_intersect_:224439621|chr1|224439621|224439784|AluSc:Alu:SINE|84|-","TE_intersect_:224451835|chr1|224451835|224452152|Charlie8:hAT-Charlie:DNA|267|+","intron_intersect_chr1:224437033|224513688","intron_intersect_chr1:224437033|224513688"]
["chr1:224439774|224459124:+","chr1:224434925|224435187:+_chr1:224439634|224439774:+_chr1:224459124|224460679:+","CNIH3_LS009","CNIH3","protein coding gene","no",2.45,0,0,0.001,14,0,0,"0(0)","UVM","yes","TE_intersect_:224439621|chr1|224439621|224439784|AluSc:Alu:SINE|84|-","NA","intron_intersect_chr1:224437033|224513688","intron_intersect_chr1:224437033|224513688"]
["chr1:224439774|224513089:+","chr1:224433684|224433851:+_chr1:224434401|224434862:+_chr1:224439634|224439774:+_chr1:224513089|224513146:+","UN_CNIH3_LS0042","CNIH3","protein coding gene","no",2.67,0,0,0.013,121,0,0,"0(0)","THCA","no","TE_intersect_:224439621|chr1|224439621|224439784|AluSc:Alu:SINE|84|-","TE_intersect_:224513044|chr1|224513044|224513120|L2c:L2:LINE|355|+","intron_intersect_chr1:224437033|224513688","intron_intersect_chr1:224437033|224513688"]
["chr1:224529420|224529915:+","chr1:224529223|224529420:+_chr1:224529915|224530163:+_chr1:224566199|224566264:+_chr1:224583164|224583267:+_chr1:224588361|224590261:+","UN_CNIH3_LS0100","CNIH3","protein coding gene","no",1.81,0,0,0.003,33,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:224529420|224536936","intron_intersect_chr1:224529420|224536936"]
["chr1:224611592|224615218:-","chr1:224611392|224611592:-_chr1:224615218|224615427:-_chr1:224615612|224615736:-_chr1:224616198|224616380:-","UN_CNIH3_LS0120","CNIH3","protein coding gene","no",4.14,0,0,0.039,371,0,0,"0(0)","BLCA;GBM;OV;SARC;SKCM","no","NA","TE_intersect_:224611344|chr1|224611344|224611613|MLT1J:ERVL-MaLR:LTR|281|-","intron_intersect_chr1:224588616|224615296","intron_intersect_chr1:224588616|224615296"]
["chr1:224615736|224616021:-","chr1:224615296|224615427:-_chr1:224615612|224615736:-_chr1:224616021|224616405:-","UN_CNIH3_LS0125","CNIH3","protein coding gene","no",1.87,0.01,0,0.033,315,0.001,1,"0(0)","BLCA;SARC","no","NA","NA","intron_intersect_chr1:224615736|224616075","intron_intersect_chr1:224615736|224616075"]
["chr1:224615736|224616036:-","chr1:224615296|224615427:-_chr1:224615612|224615736:-_chr1:224616036|224616412:-","UN_CNIH3_LS0126","CNIH3","protein coding gene","no",1.7,0,0,0.004,41,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:224615736|224616075","intron_intersect_chr1:224615736|224616075"]
["chr1:224701765|224710945:-","chr1:224701661|224701765:-_chr1:224710945|224711069:-_chr1:224718944|224719108:-_chr1:224730298|224730662:-","UN_CNIH3_LS0153","CNIH3","protein coding gene","no",6.14,0,0,0.021,205,0,0,"0(0)","GBM;LGG;SKCM","no","TE_intersect_:224710759|chr1|224710759|224711045|L2c:L2:LINE|341|+","TE_intersect_:224701642|chr1|224701642|224701865|MIR:MIR:SINE|250|-","intron_intersect_chr1:224684843|224717504","intron_intersect_chr1:224684843|224717504"]
["chr1:224711069|224718944:-","chr1:224701661|224701765:-_chr1:224710945|224711069:-_chr1:224718944|224719108:-_chr1:224730298|224730662:-","UN_CNIH3_LS0155","CNIH3","protein coding gene","no",6.65,0,0,0.022,214,0,0,"0(0)","GBM;LGG;SKCM","no","NA","NA","exon_intersect_chr1:224718944|224719108","intron_intersect_chr1:224684843|224717504"]
["chr1:224719108|224727694:-","chr1:224701632|224711069:-_chr1:224718944|224719108:-_chr1:224727694|224727865:-_chr1:224730298|224730662:-","UN_CNIH3_LS0160","CNIH3","protein coding gene","no",3.94,0,0,0.004,40,0,0,"0(0)","SKCM","no","NA","TE_intersect_:224718976|chr1|224718976|224719125|L2a:L2:LINE|357|+","intron_intersect_chr1:224722541|224730298","intron_intersect_chr1:224719108|224722467"]
["chr1:224727865|224730298:-","chr1:224701632|224701765:-_chr1:224709391|224709500:-_chr1:224710945|224711069:-_chr1:224718944|224719108:-_chr1:224727575|224727865:-_chr1:224730298|224730662:-","UN_CNIH3_LS0170","CNIH3","protein coding gene","no",4.3,0,0,0.008,78,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr1:224730298|224730662","intron_intersect_chr1:224722541|224730298"]
["chr1:224773053|224773173:+","chr1:224772410|224773053:+_chr1:224773173|224773341:+","UN_AL391811.1_LS0001","AL391811.1","lncRNA gene","no",5.81,0,0,0.007,66,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:224767153|224773173","exon_intersect_chr1:224773173|224773341"]
["chr1:225007544|225038694:+","chr1:225002871|225002927:+_chr1:225007413|225007544:+_chr1:225038694|225038823:+_chr1:225042835|225043322:+","UN_DNAH14_LS0016","DNAH14","protein coding gene","no",6.39,0,0,0.007,69,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:225007544|225023615","exon_intersect_chr1:225038694|225038823"]
["chr1:22506321|22509913:-","chr1:22505886|22506321:-_chr1:22509913|22509968:-","UN_ZBTB40_LS0017","ZBTB40","protein coding gene","no",2.37,0,0,0.003,29,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr1:22509233|22511179","intron_intersect_chr1:22506241|22508001"]
["chr1:225144330|225146081:-","chr1:225143774|225144330:-_chr1:225146081|225146535:-","UN_DNAH14_LS0032","DNAH14","protein coding gene","no",4.67,0,0,0.002,20,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr1:225145379|225147104","intron_intersect_chr1:225141021|225144397"]
["chr1:225519557|225530606:+","chr1:225519151|225519336:+_chr1:225519391|225519557:+_chr1:225530606|225530640:+","UN_ENAH_LS0060","ENAH","protein coding gene","no",4.24,0,0,0.002,20,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:225519044|225519565","exon_intersect_chr1:225530554|225530638"]
["chr1:225567414|225614460:-","chr1:225486851|225497812:-_chr1:225498347|225498404:-_chr1:225500992|225501070:-_chr1:225504991|225505053:-_chr1:225507951|225508017:-_chr1:225511811|225511859:-_chr1:225512657|225512714:-_chr1:225512871|225513016:-_chr1:225514596|225514900:-_chr1:225519198|225519565:-_chr1:225530554|225530638:-_chr1:225554906|225555083:-_chr1:225567249|225567414:-_chr1:225614460|225614588:-","UN_ENAH_LS0073","ENAH","protein coding gene","no",3.23,0,0,0.001,14,0,0,"0(0)","TGCT","no","TE_intersect_:225614358|chr1|225614358|225614834|MER21C:ERVL:LTR|179|-","NA","intron_intersect_chr1:225580257|225652686","intron_intersect_chr1:225567414|225580167"]
["chr1:225614883|225615162:+","chr1:225614763|225614883:+_chr1:225615162|225616380:+","UN_ENAH_LS0084","ENAH","protein coding gene","no",2.35,0,0,0.003,31,0,0,"0(0)","TGCT","no","NA","TE_intersect_:225615013|chr1|225615013|225616343|SVA_B:SVA:Retroposon|37|+","intron_intersect_chr1:225580257|225652686","intron_intersect_chr1:225580257|225652686"]
["chr1:22563942|22569289:+","chr1:22563785|22563942:+_chr1:22569289|22570125:+_chr1:22572421|22572577:+_chr1:22573078|22573176:+_chr1:22573678|22573844:+_chr1:22576217|22576880:+_chr1:22586480|22586635:+_chr1:22588871|22589621:+","UN_EPHA8_LS0001","EPHA8","protein coding gene","no",1.59,0,0,0.008,76,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22563729|22569289","exon_intersect_chr1:22569289|22569353"]
["chr1:22564071|22569289:+","chr1:22564053|22564071:+_chr1:22569289|22572577:+_chr1:22573078|22573176:+_chr1:22573678|22573844:+_chr1:22576217|22576880:+_chr1:22586480|22586635:+_chr1:22588871|22589621:+","UN_EPHA8_LS0002","EPHA8","protein coding gene","no",0.96,0,0,0.002,15,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22563729|22569289","exon_intersect_chr1:22569289|22569353"]
["chr1:225691793|225693162:+","chr1:225691619|225691793:+_chr1:225693162|225693328:+_chr1:225700257|225701106:+_chr1:225710503|225710744:+","UN_AC099066.2_UP_LS0011","AC099066.2","lncRNA gene","no",2.14,0,0,0.013,124,0,0,"0(0)","CHOL;LIHC","no","NA","TE_intersect_:225692782|chr1|225692782|225693233|LTR33C:ERVL:LTR|245|-","NA","NA"]
["chr1:225693328|225700257:+","chr1:225691619|225691793:+_chr1:225693162|225693328:+_chr1:225700257|225701106:+_chr1:225710503|225710744:+","UN_AC099066.2_UP_LS0013","AC099066.2","lncRNA gene","no",2.56,0,0,0.014,135,0,0,"0(0)","CHOL;LIHC","no","NA","NA","NA","NA"]
["chr1:22569353|22572421:+","chr1:22563564|22563942:+_chr1:22569289|22569353:+_chr1:22572421|22572577:+_chr1:22573078|22573176:+_chr1:22573678|22573844:+_chr1:22576217|22576880:+_chr1:22586480|22586635:+_chr1:22588871|22589621:+","UN_EPHA8_LS0004","EPHA8","protein coding gene","no",4.13,0,0,0.004,34,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22569353|22576217","intron_intersect_chr1:22569353|22576217"]
["chr1:225701432|225710503:+","chr1:225701322|225701432:+_chr1:225710503|225710568:+_chr1:225716046|225716409:+","UN_AC099066.2_LS0003","AC099066.2","lncRNA gene","no",2.58,0,0,0.015,141,0,0,"0(0)","OV;SARC;UCS","no","NA","NA","intron_intersect_chr1:225701106|225710968","intron_intersect_chr1:225701106|225710968"]
["chr1:22572577|22573078:+","chr1:22563785|22563942:+_chr1:22569289|22570125:+_chr1:22572421|22572577:+_chr1:22573078|22573176:+_chr1:22573678|22573844:+_chr1:22576217|22576880:+_chr1:22586480|22586635:+_chr1:22588871|22589621:+","UN_EPHA8_LS0008","EPHA8","protein coding gene","no",2.65,0,0,0.008,81,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22569353|22576217","intron_intersect_chr1:22569353|22576217"]
["chr1:22573176|22573678:+","chr1:22563785|22563942:+_chr1:22569289|22570125:+_chr1:22572421|22572577:+_chr1:22573078|22573176:+_chr1:22573678|22573844:+_chr1:22576217|22576880:+_chr1:22586480|22586635:+_chr1:22588871|22589621:+","UN_EPHA8_LS0009","EPHA8","protein coding gene","no",4.33,0,0,0.01,97,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22569353|22576217","intron_intersect_chr1:22569353|22576217"]
["chr1:225777879|225783300:+","chr1:225777805|225777879:+_chr1:225783300|225783368:+_chr1:225789240|225790467:+","UN_SRP9_LS0003","SRP9","protein coding gene","no",1.51,0,0,0.004,34,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:225777813|225778012","exon_intersect_chr1:225783300|225783368"]
["chr1:225796419|225800681:-","chr1:225795607|225796419:-_chr1:225800681|225800929:-","UN_AC099066.1_UP_LS0004","AC099066.1","lncRNA gene","no",3.94,0,0,0.008,78,0,0,"0(0)","UCEC","no","TE_intersect_:225800612|chr1|225800612|225800788|HERVK14-int:ERVK:LTR|106|-","TE_intersect_:225795592|chr1|225795592|225796836|SVA_A:SVA:Retroposon|68|-","NA","NA"]
["chr1:225848614|225848897:-","chr1:225840446|225841187:-_chr1:225846480|225846932:-_chr1:225847034|225847213:-_chr1:225848492|225848614:-_chr1:225848897|225849013:-","UN_TMEM63A_LS0029","TMEM63A","protein coding gene","no",24.33,0,0,0.004,34,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:225848897|225849012","intron_intersect_chr1:225848554|225848897"]
["chr1:225862351|225862463:-","chr1:225845500|225846932:-_chr1:225847034|225847213:-_chr1:225848492|225848554:-_chr1:225848897|225849012:-_chr1:225849912|225850079:-_chr1:225852664|225852769:-_chr1:225853629|225853791:-_chr1:225855878|225855940:-_chr1:225856652|225856738:-_chr1:225856911|225857017:-_chr1:225859196|225859349:-_chr1:225860860|225860997:-_chr1:225862218|225862351:-_chr1:225862463|225862578:-_chr1:225862771|225862851:-_chr1:225865897|225865967:-_chr1:225866574|225866682:-_chr1:225867112|225867163:-_chr1:225867888|225868030:-_chr1:225871076|225871113:-_chr1:225871987|225872053:-_chr1:225874288|225874367:-_chr1:225877395|225877594:-_chr1:225879220|225879410:-_chr1:225879495|225880910:-","UN_TMEM63A_LS0063","TMEM63A","protein coding gene","no",12.62,0,0,0.008,81,0,0,"0(0)","CHOL;COAD;PAAD","no","NA","NA","exon_intersect_chr1:225862455|225862578","intron_intersect_chr1:225862351|225862455"]
["chr1:22586635|22588439:+","chr1:22563819|22563942:+_chr1:22569289|22569353:+_chr1:22576217|22576880:+_chr1:22586480|22586635:+_chr1:22588439|22588578:+_chr1:22588871|22589621:+","UN_EPHA8_LS0021","EPHA8","protein coding gene","no",1.07,0,0,0.001,14,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22586635|22588871","intron_intersect_chr1:22586635|22588871"]
["chr1:225877984|225879220:-","chr1:225845498|225846932:-_chr1:225847034|225847213:-_chr1:225848492|225848554:-_chr1:225848897|225849012:-_chr1:225849912|225850079:-_chr1:225852664|225852769:-_chr1:225853629|225853791:-_chr1:225855878|225855940:-_chr1:225856652|225856738:-_chr1:225856911|225857017:-_chr1:225859196|225859349:-_chr1:225860860|225860997:-_chr1:225862218|225862351:-_chr1:225862455|225862578:-_chr1:225862771|225862851:-_chr1:225865897|225868030:-_chr1:225871076|225871113:-_chr1:225871987|225872053:-_chr1:225874288|225874367:-_chr1:225877395|225877984:-_chr1:225879220|225879410:-_chr1:225882304|225883886:-","UN_TMEM63A_LS0082","TMEM63A","protein coding gene","no",2.07,0,0,0.005,50,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:225879220|225879410","intron_intersect_chr1:225877679|225879220"]
["chr1:225882710|225883972:-","chr1:225845478|225846932:-_chr1:225847034|225847213:-_chr1:225848492|225848554:-_chr1:225848897|225849012:-_chr1:225849912|225850079:-_chr1:225852664|225852769:-_chr1:225853629|225853791:-_chr1:225855878|225855940:-_chr1:225856652|225856738:-_chr1:225856911|225857017:-_chr1:225859196|225859349:-_chr1:225860860|225860997:-_chr1:225862218|225862351:-_chr1:225862455|225862578:-_chr1:225862771|225862851:-_chr1:225865897|225867163:-_chr1:225867888|225868030:-_chr1:225871076|225871113:-_chr1:225871987|225872053:-_chr1:225874288|225874367:-_chr1:225877395|225877594:-_chr1:225879220|225882710:-_chr1:225883972|225884255:-","UN_TMEM63A_UP_LS0002","TMEM63A","protein coding gene","no",0.95,0,0,0.004,42,0,0,"0(0)","STAD","no","NA","NA","NA","NA"]
["chr1:22588578|22588871:+","chr1:22563819|22563942:+_chr1:22569289|22569353:+_chr1:22576217|22576880:+_chr1:22586480|22586635:+_chr1:22588439|22588578:+_chr1:22588871|22589621:+","UN_EPHA8_LS0022","EPHA8","protein coding gene","no",1.1,0,0,0.001,12,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22586635|22588871","exon_intersect_chr1:22588871|22589621"]
["chr1:22589258|22597228:-","chr1:22588899|22589258:-_chr1:22597228|22597240:-","UN_EPHA8_LS0024","EPHA8","protein coding gene","no",11.02,0,0,0.005,44,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:22596173|22597312","exon_intersect_chr1:22588871|22589621"]
["chr1:225983592|225984106:+","chr1:225983425|225983592:+_chr1:225984106|225984296:+","UN_SDE2_LS0003","SDE2","protein coding gene","no",0.8,0,0,0.003,27,0,0,"0(0)","ESCA","no","TE_intersect_:225983551|chr1|225983551|225983702|AluSz6:Alu:SINE|166|-","TE_intersect_:225983964|chr1|225983964|225984268|AluSq2:Alu:SINE|102|+","exon_intersect_chr1:225982702|225985523","exon_intersect_chr1:225982702|225985523"]
["chr1:225984150|225984199:+","chr1:225984101|225984150:+_chr1:225984199|225984381:+","UN_SDE2_LS0014","SDE2","protein coding gene","no",2.13,0,0,0.003,31,0,0,"0(0)","ESCA","no","TE_intersect_:225983964|chr1|225983964|225984268|AluSq2:Alu:SINE|102|+","TE_intersect_:225983964|chr1|225983964|225984268|AluSq2:Alu:SINE|102|+","exon_intersect_chr1:225982702|225985523","exon_intersect_chr1:225982702|225985523"]
["chr1:226114896|226115073:-","chr1:226114564|226114896:-_chr1:226115073|226115946:-","UN_AL512343.2_UP_LS0007","AL512343.2","lncRNA gene","no",1.76,0,0,0.001,14,0,0,"0(0)","ESCA","no","TE_intersect_:226114298|chr1|226114298|226115980|SVA_D:SVA:Retroposon|66|-","TE_intersect_:226114298|chr1|226114298|226115980|SVA_D:SVA:Retroposon|66|-","NA","NA"]
["chr1:226114941|226114992:-","chr1:226114591|226114941:-_chr1:226114992|226115920:-","UN_AL512343.2_UP_LS0008","AL512343.2","lncRNA gene","no",7.36,0,0,0.007,64,0,0,"0(0)","ESCA","no","TE_intersect_:226114298|chr1|226114298|226115980|SVA_D:SVA:Retroposon|66|-","TE_intersect_:226114298|chr1|226114298|226115980|SVA_D:SVA:Retroposon|66|-","NA","NA"]
["chr1:226123942|226124127:+","chr1:226123824|226123942:+_chr1:226124127|226124663:+","UN_AL512343.1_UP_LS0010","AL512343.1","pseudogene","no",2.26,0,0,0.002,19,0,0,"0(0)","PAAD","no","NA","NA","NA","NA"]
["chr1:226187079|226187679:+","chr1:226186779|226187079:+_chr1:226187679|226187910:+","UN_MIXL1_UP_LS0006","MIXL1","protein coding gene","no",2,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:226239096|226246109:-","chr1:226231157|226232606:-_chr1:226233096|226233193:-_chr1:226233344|226233523:-_chr1:226238971|226239096:-_chr1:226246109|226246264:-","UN_LIN9_LS0012","LIN9","protein coding gene","yes",2.75,0,0,0.012,111,0,0,"0(0)","CESC;ESCA;OV;STAD","no","TE_intersect_:226246038|chr1|226246038|226246500|L1MEg:L1:LINE|247|-","NA","intron_intersect_chr1:226239096|226250839","intron_intersect_chr1:226239096|226250839"]
["chr1:226248203|226250839:-","chr1:226247978|226248203:-_chr1:226250839|226250919:-_chr1:226265533|226265634:-_chr1:226266213|226266332:-_chr1:226267957|226268090:-_chr1:226277775|226277932:-_chr1:226286333|226286458:-_chr1:226287664|226287797:-_chr1:226297719|226297813:-_chr1:226301173|226301205:-_chr1:226309109|226309172:-","UN_LIN9_LS0022","LIN9","protein coding gene","yes",2.07,0,0,0.018,175,0,0,"0(0)","ESCA;LUSC;OV;STAD","no","NA","NA","exon_intersect_chr1:226250839|226250919","intron_intersect_chr1:226239096|226250839"]
["chr1:226349334|226350515:+","chr1:226349007|226349334:+_chr1:226350515|226350971:+","UN_AL359704.1_UP_LS0007","AL359704.1","pseudogene","no",2.18,0,0,0.003,24,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:226349334|226353541:+","chr1:226348904|226349334:+_chr1:226353541|226353816:+","UN_AL359704.1_UP_LS0008","AL359704.1","pseudogene","no",4.97,0,0,0.011,104,0,0,"0(0)","DLBC;UCEC","no","NA","TE_intersect_:226353401|chr1|226353401|226353795|LTR78:ERV1:LTR|271|+","NA","NA"]
["chr1:22638886|22639223:-","chr1:22638667|22638886:-_chr1:22639223|22639403:-_chr1:22639533|22640380:-","UN_C1QA_LS0053","C1QA","protein coding gene","no",0.48,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:22638833|22639608","exon_intersect_chr1:22638833|22639608"]
["chr1:22639154|22639248:-","chr1:22637587|22637731:-_chr1:22638852|22639154:-_chr1:22639248|22639403:-_chr1:22639533|22640202:-","UN_C1QA_LS0063","C1QA","protein coding gene","no",6.36,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:22638833|22639608","exon_intersect_chr1:22638833|22639608"]
["chr1:22643708|22647433:-","chr1:22643660|22643708:-_chr1:22647433|22647878:-","UN_C1QC_LS0004","C1QC","protein coding gene","no",4.29,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:22647227|22648110","exon_intersect_chr1:22643630|22643886"]
["chr1:22661136|22661236:-","chr1:22659407|22659613:-_chr1:22660835|22661136:-_chr1:22661236|22661646:-","UN_C1QB_LS0049","C1QB","protein coding gene","no",24.72,0,0,0.005,49,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr1:22660812|22661538","exon_intersect_chr1:22660812|22661538"]
["chr1:226762561|226765126:-","chr1:226762375|226762561:-_chr1:226765126|226765243:-","UN_ITPKB_UP_LS0001","ITPKB","protein coding gene","no",2.31,0,0,0.003,26,0,0,"0(0)","SKCM","no","TE_intersect_:226764960|chr1|226764960|226765137|L2a:L2:LINE|244|-","TE_intersect_:226762333|chr1|226762333|226762626|LTR16A1:ERVL:LTR|302|-","NA","NA"]
["chr1:226765477|226768602:+","chr1:226765327|226765477:+_chr1:226768602|226770608:+","UN_RPS27P5_UP_LS0001","RPS27P5","pseudogene","no",4.63,0,0,0.008,81,0,0,"0(0)","SKCM","no","TE_intersect_:226765159|chr1|226765159|226765559|MSTA:ERVL-MaLR:LTR|137|+","TE_intersect_:226768583|chr1|226768583|226768872|AluJb:Alu:SINE|187|-","NA","NA"]
["chr1:226810693|226811102:+","chr1:226810621|226810693:+_chr1:226811102|226811204:+_chr1:226818126|226819143:+","UN_PSEN2_UP_LS0003","PSEN2","protein coding gene","no",4.11,0,0,0.007,64,0,0,"0(0)","SKCM;UVM","no","NA","TE_intersect_:226810893|chr1|226810893|226811286|MSTA:ERVL-MaLR:LTR|132|+","NA","NA"]
["chr1:226811204|226814287:+","chr1:226811079|226811204:+_chr1:226814287|226814566:+","UN_PSEN2_UP_LS0005","PSEN2","protein coding gene","no",4.82,0,0,0.005,44,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:226810893|chr1|226810893|226811286|MSTA:ERVL-MaLR:LTR|132|+","TE_intersect_:226814277|chr1|226814277|226814396|MamGypsy2-I:Gypsy:LTR|281|+","NA","NA"]
["chr1:226847271|226848202:+","chr1:226847172|226847271:+_chr1:226848202|226848241:+_chr1:226857322|226857486:+_chr1:226860370|226861396:+","UN_PSEN2_UP_LS0013","PSEN2","protein coding gene","no",10.03,0,0,0.004,40,0,0,"0(0)","TGCT","no","TE_intersect_:226846454|chr1|226846454|226847365|MLT1D-int:ERVL-MaLR:LTR|226|+","TE_intersect_:226847833|chr1|226847833|226848407|MER4-int:ERV1:LTR|87|+","NA","NA"]
["chr1:226848241|226855282:+","chr1:226847687|226848241:+_chr1:226855282|226855439:+_chr1:226855824|226856604:+","UN_PSEN2_UP_LS0014","PSEN2","protein coding gene","no",5.16,0,0,0.008,81,0,0,"0(0)","KICH;TGCT","no","TE_intersect_:226847833|chr1|226847833|226848407|MER4-int:ERV1:LTR|87|+","TE_intersect_:226855070|chr1|226855070|226856309|MER4-int:ERV1:LTR|76|+","NA","NA"]
["chr1:226848241|226857322:+","chr1:226847172|226847271:+_chr1:226848202|226848241:+_chr1:226857322|226857486:+_chr1:226860370|226861396:+","UN_PSEN2_UP_LS0015","PSEN2","protein coding gene","no",5.21,0,0,0.002,21,0,0,"0(0)","TGCT","no","TE_intersect_:226847833|chr1|226847833|226848407|MER4-int:ERV1:LTR|87|+","TE_intersect_:226857037|chr1|226857037|226857800|MER21C:ERVL:LTR|199|+","NA","NA"]
["chr1:226855439|226855824:+","chr1:226847687|226848241:+_chr1:226855282|226855439:+_chr1:226855824|226856604:+","UN_PSEN2_UP_LS0016","PSEN2","protein coding gene","no",4.11,0,0,0.008,74,0,0,"0(0)","KICH;TGCT","no","TE_intersect_:226855070|chr1|226855070|226856309|MER4-int:ERV1:LTR|76|+","TE_intersect_:226855070|chr1|226855070|226856309|MER4-int:ERV1:LTR|76|+","NA","NA"]
["chr1:226855439|226856153:+","chr1:226847674|226848241:+_chr1:226855282|226855439:+_chr1:226856153|226856605:+","UN_PSEN2_UP_LS0017","PSEN2","protein coding gene","no",4.08,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:226855070|chr1|226855070|226856309|MER4-int:ERV1:LTR|76|+","TE_intersect_:226855070|chr1|226855070|226856309|MER4-int:ERV1:LTR|76|+","NA","NA"]
["chr1:226855439|226857322:+","chr1:226847088|226847271:+_chr1:226848202|226848241:+_chr1:226855282|226855439:+_chr1:226857322|226857486:+_chr1:226860370|226860888:+","UN_PSEN2_UP_LS0018","PSEN2","protein coding gene","no",5.36,0,0,0.002,19,0,0,"0(0)","TGCT","no","TE_intersect_:226855070|chr1|226855070|226856309|MER4-int:ERV1:LTR|76|+","TE_intersect_:226857037|chr1|226857037|226857800|MER21C:ERVL:LTR|199|+","NA","NA"]
["chr1:226857486|226860370:+","chr1:226847172|226847271:+_chr1:226848202|226848241:+_chr1:226857322|226857486:+_chr1:226860370|226861396:+","UN_PSEN2_UP_LS0020","PSEN2","protein coding gene","no",3.26,0,0,0.006,60,0,0,"0(0)","KICH;TGCT","no","TE_intersect_:226857037|chr1|226857037|226857800|MER21C:ERVL:LTR|199|+","TE_intersect_:226860187|chr1|226860187|226861064|Charlie1a:hAT-Charlie:DNA|178|+","NA","NA"]
["chr1:226897091|226897720:+","chr1:226870881|226871404:+_chr1:226875365|226875550:+_chr1:226881888|226882048:+_chr1:226883705|226883919:+_chr1:226885538|226885679:+_chr1:226888091|226888158:+_chr1:226888829|226889049:+_chr1:226890035|226890133:+_chr1:226891278|226891361:+_chr1:226891746|226891844:+_chr1:226894007|226894125:+_chr1:226895424|226897091:+_chr1:226897720|226897829:+_chr1:226898339|226899555:+_chr1:226903502|226903791:+","UN_AL353689.2_UP_LS0005","AL353689.2","lncRNA gene","no",1.66,0,0,0.005,48,0,0,"0(0)","STAD","no","NA","NA","NA","exon_intersect_chr1:226897536|226899555"]
["chr1:226897829|226898339:+","chr1:226870567|226871404:+_chr1:226875365|226875550:+_chr1:226881888|226882048:+_chr1:226883705|226883919:+_chr1:226885538|226885679:+_chr1:226888091|226888158:+_chr1:226888829|226889049:+_chr1:226890035|226890133:+_chr1:226891278|226891361:+_chr1:226891743|226891844:+_chr1:226894007|226894125:+_chr1:226895424|226897829:+_chr1:226898339|226898446:+_chr1:226899452|226899555:+_chr1:226903502|226904498:+","UN_COQ8A_LS0002","COQ8A","protein coding gene","no",3.08,0,0,0.009,86,0,0,"0(0)","STAD","no","NA","TE_intersect_:226898254|chr1|226898254|226898374|L1ME3Cz:L1:LINE|207|-","exon_intersect_chr1:226897536|226899555","exon_intersect_chr1:226897536|226899555"]
["chr1:227059411|227068654:-","chr1:226989866|226994399:-_chr1:226994823|226994980:-_chr1:227004994|227005111:-_chr1:227016080|227016197:-_chr1:227016927|227017050:-_chr1:227023263|227023347:-_chr1:227026055|227026152:-_chr1:227028657|227029250:-_chr1:227030408|227030470:-_chr1:227031298|227031514:-_chr1:227033334|227033415:-_chr1:227034655|227034794:-_chr1:227035471|227035607:-_chr1:227040131|227040236:-_chr1:227047927|227048010:-_chr1:227051881|227051985:-_chr1:227059373|227059411:-_chr1:227068654|227068701:-_chr1:227069777|227069853:-_chr1:227072208|227072299:-_chr1:227073864|227074012:-_chr1:227074259|227074364:-_chr1:227080893|227081017:-","UN_CDC42BPA_LS0039","CDC42BPA","protein coding gene","no",1.39,0,0,0.006,59,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:227068467|227069853","intron_intersect_chr1:227059411|227068467"]
["chr1:227509519|227509611:-","chr1:227509382|227509519:-_chr1:227509611|227509728:-","UN_AL451054.1_LS0001","AL451054.1","pseudogene","no",2.72,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:227509555|227509878","exon_intersect_chr1:227509464|227509555"]
["chr1:227794734|227797290:+","chr1:227794690|227794734:+_chr1:227797290|227797460:+_chr1:227806920|227807443:+","UN_PRSS38_UP_LS0009","PRSS38","protein coding gene","no",1.55,0,0,0.006,56,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:227797460|227798960:+","chr1:227794669|227794734:+_chr1:227797290|227797460:+_chr1:227798960|227801566:+","UN_PRSS38_UP_LS0011","PRSS38","protein coding gene","no",1.85,0,0,0.002,19,0,0,"0(0)","OV","no","NA","TE_intersect_:227798791|chr1|227798791|227799379|MER49:ERV1:LTR|166|+","NA","NA"]
["chr1:227797460|227806920:+","chr1:227794690|227794734:+_chr1:227797290|227797460:+_chr1:227806920|227807443:+","UN_PRSS38_UP_LS0013","PRSS38","protein coding gene","no",2.31,0,0,0.005,50,0,0,"0(0)","OV","no","NA","TE_intersect_:227806885|chr1|227806885|227807192|AluSp:Alu:SINE|94|-","NA","NA"]
["chr1:22781137|22781421:+","chr1:22780911|22781137:+_chr1:22781421|22781485:+_chr1:22784392|22785076:+_chr1:22863037|22863192:+_chr1:22864877|22865212:+_chr1:22882359|22882483:+_chr1:22892884|22893046:+_chr1:22895472|22895580:+_chr1:22896414|22896478:+_chr1:22905987|22906109:+_chr1:22906710|22906957:+_chr1:22907953|22908168:+_chr1:22909022|22909171:+_chr1:22910382|22910575:+_chr1:22912444|22912599:+_chr1:22913462|22915325:+","UN_EPHB2_LS0010","EPHB2","protein coding gene","yes",1.97,0,0,0.01,99,0,0,"0(0)","OV;TGCT","no","TE_intersect_:22781038|chr1|22781038|22781345|AluY:Alu:SINE|59|+","NA","intron_intersect_chr1:22775244|22781421","exon_intersect_chr1:22781421|22781485"]
["chr1:227967162|227967390:+","chr1:227967002|227967162:+_chr1:227967390|227968875:+","UN_SEPT14P17_UP_LS0015","SEPT14P17","pseudogene","no",0.55,0,0,0.004,34,0,0,"0(0)","LAML","no","TE_intersect_:227967109|chr1|227967109|227967529|MER1A:hAT-Charlie:DNA|126|+","TE_intersect_:227967109|chr1|227967109|227967529|MER1A:hAT-Charlie:DNA|126|+","NA","NA"]
["chr1:227971327|227973602:+","chr1:227971250|227971327:+_chr1:227973602|227974355:+","UN_SEPT14P17_UP_LS0027","SEPT14P17","pseudogene","no",4,0.12,0,0.007,69,0.001,1,"0(0)","UCEC","no","NA","NA","NA","NA"]
["chr1:228044991|228059624:-","chr1:228044175|228044991:-_chr1:228059624|228059725:-","UN_WNT3A_LS0003","WNT3A","protein coding gene","no",1.8,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228058986|228061260","intron_intersect_chr1:228022908|228050656"]
["chr1:228082740|228097866:-","chr1:228082722|228082740:-_chr1:228097866|228098117:-","UN_ARF1_LS0001","ARF1","protein coding gene","yes",8.26,0,0,0.009,88,0,0,"0(0)","LAML;OV","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228082660|228082850"]
["chr1:228097940|228098314:-","chr1:228097849|228097940:-_chr1:228098314|228098426:-","UN_ARF1_LS0044","ARF1","protein coding gene","yes",5.82,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228097940|228098353:-","chr1:228097897|228097940:-_chr1:228098353|228098504:-_chr1:228098683|228098730:-","UN_ARF1_LS0045","ARF1","protein coding gene","yes",10.64,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228097940|228098705:-","chr1:228097841|228097940:-_chr1:228098705|228098852:-_chr1:228098920|228099069:-","UN_ARF1_LS0050","ARF1","protein coding gene","yes",2.91,0,0,0.002,22,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228098271|228098853:-","chr1:228098083|228098271:-_chr1:228098853|228099027:-","UN_ARF1_LS0100","ARF1","protein coding gene","yes",2.82,0,0,0.005,47,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228098480|228098710:-","chr1:228098087|228098368:-_chr1:228098405|228098480:-_chr1:228098710|228098992:-_chr1:228099092|228099212:-","UN_ARF1_LS0126","ARF1","protein coding gene","yes",2.08,0,0,0.004,36,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228098480|228098734:-","chr1:228098239|228098480:-_chr1:228098734|228098782:-","UN_ARF1_LS0129","ARF1","protein coding gene","yes",5.16,0,0,0.004,43,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228098480|228098925:-","chr1:228096523|228097137:-_chr1:228097437|228097694:-_chr1:228097855|228098039:-_chr1:228098314|228098480:-_chr1:228098925|228099139:-","UN_ARF1_LS0131","ARF1","protein coding gene","yes",7.08,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228098630|228098920:-","chr1:228098406|228098630:-_chr1:228098920|228098992:-_chr1:228099092|228099225:-","UN_ARF1_LS0152","ARF1","protein coding gene","yes",13.05,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228097852|228099212","exon_intersect_chr1:228097852|228099212"]
["chr1:228115480|228119882:-","chr1:228106644|228106918:-_chr1:228107668|228107869:-_chr1:228108235|228108318:-_chr1:228108955|228109021:-_chr1:228109149|228109307:-_chr1:228113945|228115480:-_chr1:228119882|228119958:-_chr1:228121058|228121333:-","UN_FAM96AP2_UP_LS0001","FAM96AP2","pseudogene","no",3.79,0,0,0.004,35,0,0,"0(0)","STAD","no","TE_intersect_:228118930|chr1|228118930|228120532|MER57-int:ERV1:LTR|164|-","NA","NA","NA"]
["chr1:228122854|228124821:-","chr1:228122699|228122854:-_chr1:228124821|228124894:-","UN_FAM96AP2_UP_LS0004","FAM96AP2","pseudogene","no",2.15,0,0,0.007,66,0,0,"0(0)","ESCA;OV","no","TE_intersect_:228124793|chr1|228124793|228124936|ERV24_Prim-int:ERV1:LTR|283|+","TE_intersect_:228122538|chr1|228122538|228123076|LTR48B:ERV1:LTR|223|-","NA","exon_intersect_chr1:228121523|228123771"]
["chr1:228298717|228306372:+","chr1:228294195|228294415:+_chr1:228294780|228295043:+_chr1:228298454|228298717:+_chr1:228306372|228306638:+_chr1:228306901|228307167:+_chr1:228307259|228307531:+_chr1:228309099|228309295:+_chr1:228309484|228309559:+_chr1:228315847|228316119:+_chr1:228316709|228316984:+_chr1:228317464|228317751:+_chr1:228317895|228318173:+_chr1:228318884|228319254:+_chr1:228321344|228322214:+_chr1:228323328|228323606:+_chr1:228332860|228332938:+_chr1:228333199|228333323:+_chr1:228333583|228333780:+_chr1:228334512|228334544:+_chr1:228334815|228334913:+_chr1:228335080|228335298:+_chr1:228335791|228335851:+_chr1:228336200|228336270:+_chr1:228337004|228337126:+_chr1:228337244|228337383:+_chr1:228337944|228338144:+_chr1:228338290|228338372:+_chr1:228338853|228339026:+_chr1:228339945|228340101:+_chr1:228340506|228340622:+_chr1:228340724|228340888:+_chr1:228341095|228341253:+_chr1:228341437|228341614:+_chr1:228342119|228342232:+_chr1:228349890|228350057:+_chr1:228350841|228350943:+_chr1:228351321|228351450:+_chr1:228352951|228353062:+_chr1:228356151|228356193:+_chr1:228359597|228361248:+","OBSCN_LS065","OBSCN","protein coding gene","no",1.6,0,0,0.006,54,0,0,"0(0)","OV","yes","NA","NA","intron_intersect_chr1:228298717|228299259","exon_intersect_chr1:228306372|228306638"]
["chr1:228347078|228348954:-","chr1:228346130|228347078:-_chr1:228348954|228349085:-_chr1:228349859|228349901:-","UN_OBSCN_LS0109","OBSCN","protein coding gene","no",2.25,0,0,0.005,51,0,0,"0(0)","ACC;OV","no","NA","NA","intron_intersect_chr1:228342232|228349890","intron_intersect_chr1:228342232|228349890"]
["chr1:228349085|228349859:-","chr1:228346130|228347078:-_chr1:228348954|228349085:-_chr1:228349859|228349901:-","UN_OBSCN_LS0113","OBSCN","protein coding gene","no",1.63,0,0,0.004,36,0,0,"0(0)","ACC;OV","no","NA","NA","intron_intersect_chr1:228342232|228349890","intron_intersect_chr1:228342232|228349890"]
["chr1:228352254|228360890:-","chr1:228346130|228347078:-_chr1:228348954|228349085:-_chr1:228351960|228352254:-_chr1:228360890|228360999:-_chr1:228361447|228361807:-_chr1:228362170|228362574:-","UN_OBSCN_LS0122","OBSCN","protein coding gene","no",4.04,0,0,0.001,12,0,0,"0(0)","ACC","no","NA","NA","exon_intersect_chr1:228359597|228361250","intron_intersect_chr1:228351450|228352951"]
["chr1:228352275|228352951:+","chr1:228352231|228352275:+_chr1:228352951|228353062:+_chr1:228356151|228356193:+_chr1:228359597|228361250:+","UN_OBSCN_LS0124","OBSCN","protein coding gene","no",0.85,0,0,0.002,16,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr1:228351450|228352951","exon_intersect_chr1:228352951|228353062"]
["chr1:228366802|228372270:-","chr1:228360179|228360312:-_chr1:228360890|228360999:-_chr1:228361447|228361807:-_chr1:228364453|228364610:-_chr1:228365700|228365779:-_chr1:228366685|228366802:-_chr1:228372270|228372392:-","UN_OBSCN_LS0171","OBSCN","protein coding gene","no",2.07,0,0,0.009,83,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228371023|228373081","intron_intersect_chr1:228366568|228366808"]
["chr1:228369472|228369942:+","chr1:228369296|228369472:+_chr1:228369942|228370094:+_chr1:228370193|228370238:+_chr1:228370679|228370756:+_chr1:228371023|228373081:+_chr1:228373932|228374012:+_chr1:228374314|228374424:+_chr1:228374585|228374752:+_chr1:228375702|228375824:+_chr1:228376008|228376178:+_chr1:228376793|228376874:+_chr1:228377052|228377291:+_chr1:228377489|228377712:+_chr1:228377931|228378006:+_chr1:228378271|228378420:+_chr1:228378618|228378877:+","UN_OBSCN_LS0186","OBSCN","protein coding gene","no",1.03,0,0,0.001,12,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr1:228369162|228369942","exon_intersect_chr1:228369942|228370094"]
["chr1:228378006|228378231:+","chr1:228341111|228341614:+_chr1:228342119|228342232:+_chr1:228349890|228350057:+_chr1:228350841|228350943:+_chr1:228351321|228351450:+_chr1:228352951|228353062:+_chr1:228362576|228362755:+_chr1:228364981|228365077:+_chr1:228365436|228370238:+_chr1:228370679|228370756:+_chr1:228371023|228373081:+_chr1:228373932|228374424:+_chr1:228374585|228374748:+_chr1:228375702|228375824:+_chr1:228376008|228376178:+_chr1:228376647|228376874:+_chr1:228377052|228377291:+_chr1:228377489|228377712:+_chr1:228377931|228378006:+_chr1:228378231|228378420:+_chr1:228378618|228378876:+","UN_OBSCN_LS0206","OBSCN","protein coding gene","no",4.77,0,0,0.004,39,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr1:228378006|228378271","intron_intersect_chr1:228378006|228378271"]
["chr1:228435461|228441757:-","chr1:228435303|228435461:-_chr1:228441757|228441938:-","UN_HIST3H3_UP_LS0001","HIST3H3","protein coding gene","no",3.06,0,0,0.01,94,0,0,"0(0)","LGG;OV;UCS;UVM","no","TE_intersect_:228441454|chr1|228441454|228442382|MER49:ERV1:LTR|175|-","NA","NA","NA"]
["chr1:228459603|228459879:+","chr1:228458107|228459603:+_chr1:228459879|228464105:+","UN_HIST3H2BB_LS0002","HIST3H2BB","protein coding gene","no",1.55,0,0,0.012,118,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228458107|228460470","exon_intersect_chr1:228458107|228460470"]
["chr1:228487456|228487521:-","chr1:228487385|228487456:-_chr1:228487521|228487808:-_chr1:228494723|228494890:-","UN_RNF187_LS0002","RNF187","protein coding gene","no",2.16,0,0,0.008,73,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228487061|228487878","exon_intersect_chr1:228487061|228487878"]
["chr1:228493167|228494095:-","chr1:228493051|228493167:-_chr1:228494095|228494111:-_chr1:228494258|228494451:-_chr1:228494536|228494669:-","UN_RNF187_LS0033","RNF187","protein coding gene","no",2.17,0,0,0.006,57,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228493883|228495766","exon_intersect_chr1:228493053|228493274"]
["chr1:228493250|228494112:-","chr1:228488795|228488972:-_chr1:228493057|228493250:-_chr1:228494112|228494766:-","UN_RNF187_LS0045","RNF187","protein coding gene","no",3.05,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228493883|228495766","exon_intersect_chr1:228493053|228493274"]
["chr1:228494123|228494241:-","chr1:228493981|228494123:-_chr1:228494241|228494423:-_chr1:228494501|228494508:-_chr1:228494531|228494671:-","UN_RNF187_LS0076","RNF187","protein coding gene","no",2.65,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228493883|228495766","exon_intersect_chr1:228493883|228495766"]
["chr1:228494421|228494475:-","chr1:228494120|228494421:-_chr1:228494475|228494752:-","UN_RNF187_LS0120","RNF187","protein coding gene","no",5.47,0,0,0.008,75,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228493883|228495766","exon_intersect_chr1:228493883|228495766"]
["chr1:228494421|228494496:-","chr1:228488558|228489066:-_chr1:228493068|228494127:-_chr1:228494275|228494421:-_chr1:228494496|228494960:-","UN_RNF187_LS0121","RNF187","protein coding gene","no",7.14,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:228493883|228495766","exon_intersect_chr1:228493883|228495766"]
["chr1:228687546|228921763:+","chr1:228687364|228687546:+_chr1:228921763|228921784:+","UN_ISCA1P2_UP_LS0001","ISCA1P2","pseudogene","no",10.49,0,0,0.004,42,0,0,"0(0)","COAD","no","NA","NA","exon_intersect_chr1:228687415|228687826","NA"]
["chr1:228687580|228921763:+","chr1:228687348|228687580:+_chr1:228921763|228921784:+","UN_ISCA1P2_UP_LS0002","ISCA1P2","pseudogene","no",9.08,0,0,0.004,41,0,0,"0(0)","COAD","no","NA","NA","exon_intersect_chr1:228687415|228687826","NA"]
["chr1:228931934|228935797:-","chr1:228929889|228931934:-_chr1:228935797|228936039:-","UN_RNA5SP18_UP_LS0025","RNA5SP18","no","no",2.33,0,0,0.007,69,0,0,"0(0)","LUAD","no","NA","NA","NA","NA"]
["chr1:228949193|229177382:-","chr1:228897204|228897350:-_chr1:228897788|228897948:-_chr1:228948621|228948733:-_chr1:228948834|228949193:-_chr1:229177382|229180543:-","UN_RNA5SP18_UP_LS0042","RNA5SP18","no","no",5.13,0,0,0.004,37,0,0,"0(0)","OV","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:228948093|chr1|228948093|228949637|HERVH-int:ERV1:LTR|98|+","NA","NA"]
["chr1:228949647|229415787:-","chr1:228768689|228768878:-_chr1:228948621|228948733:-_chr1:228949582|228949647:-_chr1:229415787|229415852:-","UN_RNA5SP18_UP_LS0043","RNA5SP18","no","no",2.18,0,0,0.002,23,0,0,"0(0)","OV","no","TE_intersect_:229415748|chr1|229415748|229415920|HERVH-int:ERV1:LTR|140|+","TE_intersect_:228949631|chr1|228949631|228949779|HERVH-int:ERV1:LTR|155|+","NA","NA"]
["chr1:229093288|229094167:-","chr1:229087100|229089951:-_chr1:229091506|229091566:-_chr1:229092087|229093288:-_chr1:229094167|229094905:-","UN_AL137793.1_LS0002","AL137793.1","lncRNA gene","no",0.4,0,0,0.006,55,0,0,"0(0)","THCA","no","TE_intersect_:229093662|chr1|229093662|229094499|MER4D0:ERV1:LTR|116|+","TE_intersect_:229093226|chr1|229093226|229093332|MLT1N2:ERVL-MaLR:LTR|252|+","intron_intersect_chr1:229093288|229094781","intron_intersect_chr1:229093288|229094781"]
["chr1:229093288|229176582:-","chr1:229087088|229089951:-_chr1:229091506|229091566:-_chr1:229092087|229093288:-_chr1:229176582|229180140:-","UN_AL137793.2_UP_LS0023","AL137793.2","lncRNA gene","no",1.12,0,0,0.004,35,0,0,"0(0)","OV","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:229093226|chr1|229093226|229093332|MLT1N2:ERVL-MaLR:LTR|252|+","NA","intron_intersect_chr1:229093288|229094781"]
["chr1:229093288|229176805:-","chr1:229086861|229089951:-_chr1:229091506|229091737:-_chr1:229092087|229093288:-_chr1:229176805|229180543:-","UN_AL137793.2_UP_LS0024","AL137793.2","lncRNA gene","no",2.15,0,0,0.004,43,0,0,"0(0)","OV","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:229093226|chr1|229093226|229093332|MLT1N2:ERVL-MaLR:LTR|252|+","NA","intron_intersect_chr1:229093288|229094781"]
["chr1:229123113|229124560:-","chr1:229121765|229123113:-_chr1:229124560|229124578:-","UN_AL137793.1_UP_LS0026","AL137793.1","lncRNA gene","no",1.83,0,0,0.005,44,0,0,"0(0)","STAD","no","NA","TE_intersect_:229123031|chr1|229123031|229123166|L2:L2:LINE|341|-","NA","NA"]
["chr1:229140380|229140645:-","chr1:229139960|229140380:-_chr1:229140645|229140694:-","UN_AL137793.1_UP_LS0042","AL137793.1","lncRNA gene","no",3.71,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:229140703|229176109:-","chr1:229139866|229140380:-_chr1:229140645|229140703:-_chr1:229176109|229176146:-","UN_AL137793.1_UP_LS0046","AL137793.1","lncRNA gene","no",1.98,0,0,0.003,26,0,0,"0(0)","OV","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","NA","NA","NA"]
["chr1:229174038|229174769:+","chr1:229173773|229174038:+_chr1:229174769|229174926:+_chr1:229179717|229180120:+","UN_TMEM78_UP_LS0001","TMEM78","lncRNA gene","no",1.96,0,0,0.003,25,0,0,"0(0)","OV","no","TE_intersect_:229173988|chr1|229173988|229174253|AluSq2:Alu:SINE|106|+","TE_intersect_:229174728|chr1|229174728|229174780|LTR7:ERV1:LTR|39|+","NA","NA"]
["chr1:229174644|229174769:+","chr1:229174277|229174644:+_chr1:229174769|229174926:+_chr1:229179720|229180140:+","UN_TMEM78_UP_LS0003","TMEM78","lncRNA gene","no",2.83,0,0,0.006,60,0,0,"0(0)","OV;TGCT","no","TE_intersect_:229174257|chr1|229174257|229174711|LTR7:ERV1:LTR|56|+","TE_intersect_:229174728|chr1|229174728|229174780|LTR7:ERV1:LTR|39|+","NA","NA"]
["chr1:229174926|229176869:+","chr1:229172921|229174644:+_chr1:229174769|229174926:+_chr1:229176869|229180168:+","UN_TMEM78_UP_LS0006","TMEM78","lncRNA gene","no",2.68,0,0,0.003,31,0,0,"0(0)","OV;TGCT","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","NA","NA"]
["chr1:229174926|229179717:+","chr1:229174064|229174644:+_chr1:229174769|229174926:+_chr1:229179717|229180171:+","UN_TMEM78_UP_LS0007","TMEM78","lncRNA gene","no",4.33,0,0,0.007,68,0,0,"0(0)","OV;TGCT","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:229179350|chr1|229179350|229179726|HERVH-int:ERV1:LTR|75|+","NA","NA"]
["chr1:229174926|229179720:+","chr1:229174277|229174644:+_chr1:229174769|229174926:+_chr1:229179720|229180140:+","UN_TMEM78_UP_LS0008","TMEM78","lncRNA gene","no",4.87,0,0,0.006,61,0,0,"0(0)","OV;TGCT","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:229179350|chr1|229179350|229179726|HERVH-int:ERV1:LTR|75|+","NA","NA"]
["chr1:229176970|229179717:+","chr1:229173592|229174644:+_chr1:229174769|229176970:+_chr1:229179717|229180140:+","UN_TMEM78_UP_LS0010","TMEM78","lncRNA gene","no",3.66,0,0,0.019,185,0,0,"0(0)","OV;TGCT","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:229179350|chr1|229179350|229179726|HERVH-int:ERV1:LTR|75|+","NA","NA"]
["chr1:229176970|229179720:+","chr1:229176357|229176970:+_chr1:229179720|229180140:+","UN_TMEM78_UP_LS0011","TMEM78","lncRNA gene","no",3.75,0,0,0.012,115,0,0,"0(0)","OV","no","TE_intersect_:229174780|chr1|229174780|229177850|HERVH-int:ERV1:LTR|88|+","TE_intersect_:229179350|chr1|229179350|229179726|HERVH-int:ERV1:LTR|75|+","NA","NA"]
["chr1:229179107|229417606:+","chr1:229178987|229179107:+_chr1:229417606|229417689:+","UN_AL160004.2_UP_LS0001","AL160004.2","pseudogene","no",10.09,0,0,0.003,27,0,0,"0(0)","OV","no","TE_intersect_:229178473|chr1|229178473|229179135|HERVH-int:ERV1:LTR|133|+","TE_intersect_:229415910|chr1|229415910|229417633|HERVH-int:ERV1:LTR|152|+","NA","NA"]
["chr1:229238031|229243524:-","chr1:229237964|229238031:-_chr1:229243524|229243592:-_chr1:229245980|229246097:-_chr1:229252101|229252203:-_chr1:229253263|229253391:-_chr1:229256287|229269627:-_chr1:229270976|229271313:-","UN_AL162595.2_UP_LS0003","AL162595.2","lncRNA gene","no",2.7,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","TE_intersect_:229237877|chr1|229237877|229238169|L1ME4a:L1:LINE|278|+","NA","NA"]
["chr1:229243592|229252101:-","chr1:229242697|229243025:-_chr1:229243524|229243592:-_chr1:229252101|229252203:-_chr1:229253263|229253468:-","UN_AL162595.2_UP_LS0006","AL162595.2","lncRNA gene","no",3.08,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:229252064|chr1|229252064|229252608|MLT1G1:ERVL-MaLR:LTR|234|+","TE_intersect_:229243592|chr1|229243592|229243718|MIR:MIR:SINE|300|+","NA","NA"]
["chr1:229243592|229253263:-","chr1:229242690|229243025:-_chr1:229243524|229243592:-_chr1:229253263|229253483:-","UN_AL162595.2_UP_LS0007","AL162595.2","lncRNA gene","no",2.84,0,0,0.009,83,0,0,"0(0)","TGCT","no","TE_intersect_:229252608|chr1|229252608|229253442|L2a:L2:LINE|267|+","TE_intersect_:229243592|chr1|229243592|229243718|MIR:MIR:SINE|300|+","NA","NA"]
["chr1:229243592|229256287:-","chr1:229242587|229243025:-_chr1:229243524|229243592:-_chr1:229256287|229269627:-_chr1:229270976|229271896:-","UN_AL162595.2_UP_LS0008","AL162595.2","lncRNA gene","no",2.23,0,0,0.01,97,0,0,"0(0)","GBM;OV","no","TE_intersect_:229256260|chr1|229256260|229256545|MLT1F1:ERVL-MaLR:LTR|232|+","TE_intersect_:229243592|chr1|229243592|229243718|MIR:MIR:SINE|300|+","NA","NA"]
["chr1:229246097|229252101:-","chr1:229242445|229243025:-_chr1:229243524|229243592:-_chr1:229245980|229246097:-_chr1:229252101|229252203:-","UN_AL162595.2_UP_LS0011","AL162595.2","lncRNA gene","no",5.2,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:229252064|chr1|229252064|229252608|MLT1G1:ERVL-MaLR:LTR|234|+","TE_intersect_:229245962|chr1|229245962|229246121|AluJo:Alu:SINE|157|+","NA","NA"]
["chr1:229246097|229253263:-","chr1:229244444|229246097:-_chr1:229253263|229253476:-","UN_AL162595.2_UP_LS0012","AL162595.2","lncRNA gene","no",1.69,0,0,0.003,27,0,0,"0(0)","TGCT","no","TE_intersect_:229252608|chr1|229252608|229253442|L2a:L2:LINE|267|+","TE_intersect_:229245962|chr1|229245962|229246121|AluJo:Alu:SINE|157|+","NA","NA"]
["chr1:229249626|229252101:-","chr1:229242569|229243025:-_chr1:229243524|229243592:-_chr1:229245980|229246097:-_chr1:229249362|229249626:-_chr1:229252101|229252203:-_chr1:229253263|229253476:-","UN_AL162595.2_UP_LS0013","AL162595.2","lncRNA gene","no",2,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:229252064|chr1|229252064|229252608|MLT1G1:ERVL-MaLR:LTR|234|+","NA","NA","NA"]
["chr1:229249626|229253263:-","chr1:229248580|229249626:-_chr1:229253263|229253478:-","UN_AL162595.2_UP_LS0014","AL162595.2","lncRNA gene","no",1.34,0,0,0.005,51,0,0,"0(0)","TGCT","no","TE_intersect_:229252608|chr1|229252608|229253442|L2a:L2:LINE|267|+","NA","NA","NA"]
["chr1:229252203|229253263:-","chr1:229242533|229243025:-_chr1:229243524|229243592:-_chr1:229245980|229246097:-_chr1:229252101|229252203:-_chr1:229253263|229253454:-","UN_AL162595.2_UP_LS0015","AL162595.2","lncRNA gene","no",2.1,0,0,0.004,43,0,0,"0(0)","TGCT","no","TE_intersect_:229252608|chr1|229252608|229253442|L2a:L2:LINE|267|+","TE_intersect_:229252064|chr1|229252064|229252608|MLT1G1:ERVL-MaLR:LTR|234|+","NA","NA"]
["chr1:229271370|229286468:+","chr1:229271216|229271370:+_chr1:229286468|229286566:+_chr1:229288729|229288843:+_chr1:229295848|229295910:+_chr1:229297482|229297636:+_chr1:229298977|229299072:+_chr1:229302862|229302989:+_chr1:229303806|229305504:+","UN_RAB4A_LS0003","RAB4A","protein coding gene","no",4.08,0,0,0.003,26,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr1:229270927|229271599","intron_intersect_chr1:229271599|229286485"]
["chr1:229496047|229497684:-","chr1:229441307|229442040:-_chr1:229444914|229445002:-_chr1:229449126|229449190:-_chr1:229450525|229450605:-_chr1:229452525|229452643:-_chr1:229458161|229458296:-_chr1:229460611|229460769:-_chr1:229463543|229463676:-_chr1:229464624|229464875:-_chr1:229465420|229465519:-_chr1:229466634|229466756:-_chr1:229470580|229470804:-_chr1:229475638|229475732:-_chr1:229477597|229477760:-_chr1:229484054|229484145:-_chr1:229486371|229486528:-_chr1:229487466|229487613:-_chr1:229489955|229490102:-_chr1:229495495|229495565:-_chr1:229495892|229496047:-_chr1:229497684|229497721:-","UN_NUP133_LS0032","NUP133","protein coding gene","no",2.52,0,0,0.003,28,0,0,"0(0)","LAML","no","TE_intersect_:229497483|chr1|229497483|229497718|MIRb:MIR:SINE|316|+","NA","intron_intersect_chr1:229496047|229498136","intron_intersect_chr1:229496047|229498136"]
["chr1:2295705|2295729:+","chr1:2285583|2295705:+_chr1:2295729|2303103:+_chr1:2303285|2303400:+_chr1:2303840|2304108:+_chr1:2304293|2306250:+_chr1:2306577|2310119:+","UN_SKI_LS0031","SKI","protein coding gene","yes",11.83,0,0,0.005,48,0,0,"0(0)","LAML","no","TE_intersect_:2295376|chr1|2295376|2296110|L1MB7:L1:LINE|269|-","TE_intersect_:2295376|chr1|2295376|2296110|L1MB7:L1:LINE|269|-","intron_intersect_chr1:2248071|2302978","intron_intersect_chr1:2248071|2302978"]
["chr1:229627759|229643533:+","chr1:229626181|229626356:+_chr1:229627621|229627759:+_chr1:229643533|229643693:+_chr1:229645859|229645969:+_chr1:229647510|229647752:+_chr1:229651235|229651322:+_chr1:229654249|229654388:+_chr1:229659100|229660523:+","UN_URB2_LS0006","URB2","protein coding gene","no",2.08,0,0,0.005,44,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:229627759|229632269","exon_intersect_chr1:229643533|229643693"]
["chr1:229897656|229905750:-","chr1:229892298|229897656:-_chr1:229905750|229905826:-","UN_LINC01682_UP_LS0001","LINC01682","lncRNA gene","no",1.95,0,0,0.004,43,0,0,"0(0)","LIHC","no","TE_intersect_:229905660|chr1|229905660|229907247|L1M5:L1:LINE|239|+","NA","NA","NA"]
["chr1:230002784|230002927:+","chr1:230002730|230002784:+_chr1:230002927|230002993:+_chr1:230005958|230006024:+_chr1:230006773|230007162:+","UN_LINC01736_LS0001","LINC01736","lncRNA gene","no",4.09,0,0,0.005,49,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr1:230002730|230002993","exon_intersect_chr1:230002730|230002993"]
["chr1:230006098|230006773:+","chr1:230002730|230002993:+_chr1:230005958|230006098:+_chr1:230006773|230007162:+","UN_LINC01736_LS0004","LINC01736","lncRNA gene","no",3.16,0,0,0.004,37,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:230002993|230006773","exon_intersect_chr1:230006773|230007162"]
["chr1:230357321|230372729:-","chr1:230321685|230323620:-_chr1:230325310|230325415:-_chr1:230332844|230333041:-_chr1:230337108|230337288:-_chr1:230350958|230351092:-_chr1:230356894|230357321:-_chr1:230372729|230372877:-","UN_PGBD5_LS0005","PGBD5","protein coding gene","no",2.09,0,0,0.003,25,0,0,"0(0)","THYM","no","TE_intersect_:230372723|chr1|230372723|230372862|MER5B:hAT-Charlie:DNA|300|-","NA","intron_intersect_chr1:230357321|230377498","intron_intersect_chr1:230357321|230377498"]
["chr1:230357321|230401594:-","chr1:230321663|230323620:-_chr1:230325310|230325415:-_chr1:230332844|230333041:-_chr1:230337108|230337288:-_chr1:230350958|230351092:-_chr1:230356894|230357321:-_chr1:230401594|230401982:-","UN_PGBD5_LS0008","PGBD5","protein coding gene","no",1.65,0,0,0.007,67,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr1:230377645|230425598","intron_intersect_chr1:230357321|230377498"]
["chr1:230360663|230374900:+","chr1:230360592|230360663:+_chr1:230374900|230375228:+","UN_PGBD5_LS0014","PGBD5","protein coding gene","no",3.12,0,0,0.005,44,0,0,"0(0)","UVM","no","TE_intersect_:230360418|chr1|230360418|230360780|THE1C:ERVL-MaLR:LTR|110|+","NA","intron_intersect_chr1:230357321|230377498","intron_intersect_chr1:230357321|230377498"]
["chr1:230360698|230374900:+","chr1:230360591|230360698:+_chr1:230374900|230375228:+","UN_PGBD5_LS0015","PGBD5","protein coding gene","no",2.56,0,0,0.002,21,0,0,"0(0)","UVM","no","TE_intersect_:230360418|chr1|230360418|230360780|THE1C:ERVL-MaLR:LTR|110|+","NA","intron_intersect_chr1:230357321|230377498","intron_intersect_chr1:230357321|230377498"]
["chr1:230398410|230399755:-","chr1:230398239|230398410:-_chr1:230399755|230399992:-_chr1:230401106|230401225:-","UN_PGBD5_LS0017","PGBD5","protein coding gene","no",4.53,0,0,0.006,55,0,0,"0(0)","KIRC","no","NA","TE_intersect_:230398198|chr1|230398198|230398571|MLT1B:ERVL-MaLR:LTR|148|-","intron_intersect_chr1:230377645|230425598","intron_intersect_chr1:230377645|230425598"]
["chr1:23083492|23083518:-","chr1:23083393|23083492:-_chr1:23083518|23083635:-","UN_KDM1A_LS0048","KDM1A","protein coding gene","no",43.66,0,0,0.003,30,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr1:23080873|23083689","exon_intersect_chr1:23080873|23083689"]
["chr1:230868416|230869076:+","chr1:230868049|230868416:+_chr1:230869076|230869359:+_chr1:230874542|230879015:+","UN_C1orf198_LS0044","C1orf198","protein coding gene","no",1.02,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:230868180|230868998","exon_intersect_chr1:230869048|230869589"]
["chr1:230979279|230995760:+","chr1:230979146|230979279:+_chr1:230995760|230995984:+_chr1:230997121|230997267:+_chr1:231000138|231000595:+","UN_ARV1_LS0003","ARV1","protein coding gene","no",3.13,0,0,0.008,73,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:230978981|230979519","exon_intersect_chr1:230995760|230995984"]
["chr1:230992470|230995760:+","chr1:230979146|230979279:+_chr1:230988320|230988439:+_chr1:230990110|230990263:+_chr1:230992226|230992470:+_chr1:230995760|230995984:+_chr1:230997121|230997267:+_chr1:231000138|231000594:+","UN_ARV1_LS0017","ARV1","protein coding gene","no",2.23,0,0,0.003,25,0,0,"0(0)","LAML","no","TE_intersect_:230991927|chr1|230991927|230992643|L2a:L2:LINE|274|+","NA","intron_intersect_chr1:230990698|230995760","exon_intersect_chr1:230995760|230995984"]
["chr1:2315998|2318990:+","chr1:2314939|2315998:+_chr1:2318990|2319526:+","UN_RER1_UP_LS0008","RER1","protein coding gene","no",3.1,0,0,0.006,58,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:231829817|231835384:+","chr1:231626837|231626934:+_chr1:231693826|231694805:+_chr1:231701955|231702024:+_chr1:231749926|231750076:+_chr1:231767140|231767269:+_chr1:231770835|231771070:+_chr1:231795242|231795296:+_chr1:231800108|231800210:+_chr1:231818329|231829817:+_chr1:231835384|231916482:+","UN_DISC1_LS0019","DISC1","protein coding gene","no",12.72,0,0,0.002,22,0,0,"0(0)","LAML","no","TE_intersect_:231829671|chr1|231829671|231830084|LTR7:ERV1:LTR|81|-","TE_intersect_:231835236|chr1|231835236|231835648|LTR7:ERV1:LTR|78|-","intron_intersect_chr1:231819244|231854739","intron_intersect_chr1:231819244|231854739"]
["chr1:231904146|231958828:+","chr1:231903944|231904146:+_chr1:231958828|231958888:+_chr1:232008785|232009049:+_chr1:232026435|232026552:+_chr1:232036692|232041124:+","UN_DISC1_LS0029","DISC1","protein coding gene","no",2.71,0,0,0.012,114,0,0,"0(0)","SKCM;UVM","no","NA","NA","intron_intersect_chr1:231866712|231925834","exon_intersect_chr1:231958828|231959503"]
["chr1:232265526|232266057:+","chr1:232261061|232261204:+_chr1:232265438|232265526:+_chr1:232266057|232269352:+","UN_RNU6-1211P_UP_LS0006","RNU6-1211P","small non-coding RNA gene","no",2.1,0,0,0.005,51,0,0,"0(0)","BRCA","no","NA","NA","NA","NA"]
["chr1:232374787|232375285:-","chr1:232374176|232374787:-_chr1:232375285|232375428:-_chr1:232375514|232375608:-_chr1:232376598|232377358:-_chr1:232378074|232380812:-","UN_BX323014.1_UP_LS0020","BX323014.1","pseudogene","no",5.19,0,0,0.005,49,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:232375428|232375514:-","chr1:232374176|232374787:-_chr1:232375285|232375428:-_chr1:232375514|232375608:-_chr1:232376598|232377358:-_chr1:232378074|232380812:-","UN_BX323014.1_UP_LS0022","BX323014.1","pseudogene","no",4.35,0,0,0.004,35,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:232375608|232376598:-","chr1:232374176|232374787:-_chr1:232375285|232375428:-_chr1:232375514|232375608:-_chr1:232376598|232377358:-_chr1:232378074|232380812:-","UN_BX323014.1_UP_LS0023","BX323014.1","pseudogene","no",3.89,0,0,0.003,30,0,0,"0(0)","THYM","no","TE_intersect_:232376407|chr1|232376407|232376614|MIRb:MIR:SINE|313|-","TE_intersect_:232375584|chr1|232375584|232376039|MLT1J:ERVL-MaLR:LTR|298|-","NA","NA"]
["chr1:232564133|232564221:+","chr1:232563921|232564133:+_chr1:232564221|232564657:+","UN_RNU6-1211P_UP_LS0029","RNU6-1211P","small non-coding RNA gene","no",6.96,0,0,0.004,36,0,0,"0(0)","ESCA","no","NA","TE_intersect_:232564221|chr1|232564221|232564235|AluSq2:Alu:SINE|108|-","NA","NA"]
["chr1:232950939|232951034:-","chr1:232948222|232950418:-_chr1:232950811|232950939:-_chr1:232951034|232951073:-","UN_NTPCR_LS0003","NTPCR","protein coding gene","no",1.71,0,0,0.002,19,0,0,"0(0)","DLBC","no","TE_intersect_:232950979|chr1|232950979|232951251|Charlie4a:hAT-Charlie:DNA|273|-","NA","exon_intersect_chr1:232950842|232951132","exon_intersect_chr1:232950842|232951132"]
["chr1:232951156|232951328:-","chr1:232950896|232951156:-_chr1:232951328|232951529:-","UN_NTPCR_LS0004","NTPCR","protein coding gene","no",2.3,0,0,0.005,47,0,0,"0(0)","DLBC;ESCA","no","NA","TE_intersect_:232950979|chr1|232950979|232951251|Charlie4a:hAT-Charlie:DNA|273|-","intron_intersect_chr1:232951132|232955557","intron_intersect_chr1:232951132|232955557"]
["chr1:232986536|232998251:-","chr1:232983435|232984477:-_chr1:232986092|232986536:-_chr1:232998251|232998438:-_chr1:232999105|232999379:-_chr1:233000305|233000535:-_chr1:233001537|233001681:-_chr1:233014665|233014777:-_chr1:233016921|233017154:-_chr1:233025146|233025583:-","UN_PCNX2_LS0004","PCNX2","protein coding gene","no",3.13,0,0,0.005,52,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr1:232998251|232998438","exon_intersect_chr1:232983435|232986540"]
["chr1:233001681|233002069:-","chr1:232984137|232984477:-_chr1:232986092|232986540:-_chr1:232998251|232998438:-_chr1:232999105|232999379:-_chr1:233000305|233000535:-_chr1:233001537|233001681:-_chr1:233002069|233002128:-_chr1:233014665|233014777:-_chr1:233016921|233017154:-_chr1:233025146|233025399:-_chr1:233054268|233054483:-_chr1:233057232|233057290:-_chr1:233090061|233090190:-_chr1:233095755|233095863:-_chr1:233112845|233112966:-_chr1:233135013|233135188:-","UN_PCNX2_LS0014","PCNX2","protein coding gene","no",0.63,0,0,0.005,44,0,0,"0(0)","CHOL;TGCT","no","NA","NA","intron_intersect_chr1:233001681|233014665","intron_intersect_chr1:233001681|233014665"]
["chr1:23310752|23310825:+","chr1:23310413|23310581:+_chr1:23310615|23310752:+_chr1:23310825|23310969:+","UN_HNRNPR_LS0017","HNRNPR","protein coding gene","no",1.54,0,0,0.004,41,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:23304688|23311066","exon_intersect_chr1:23304688|23311066"]
["chr1:233137737|233139714:-","chr1:233137601|233137737:-_chr1:233139714|233139855:-_chr1:233160283|233160425:-","UN_PCNX2_LS0073","PCNX2","protein coding gene","no",5.42,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr1:233139714|233139855","intron_intersect_chr1:233135190|233139714"]
["chr1:233139855|233140061:-","chr1:233025263|233025399:-_chr1:233054268|233054483:-_chr1:233057232|233057290:-_chr1:233065284|233065331:-_chr1:233065445|233065661:-_chr1:233090061|233090190:-_chr1:233095755|233095863:-_chr1:233135013|233135190:-_chr1:233139714|233139855:-_chr1:233140061|233140311:-","UN_PCNX2_LS0074","PCNX2","protein coding gene","no",4.21,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:233139855|233160247","intron_intersect_chr1:233139855|233160247"]
["chr1:233220710|233227226:-","chr1:233220678|233220710:-_chr1:233227226|233227371:-_chr1:233236845|233236980:-_chr1:233250739|233250832:-_chr1:233252354|233252499:-_chr1:233252641|233252788:-_chr1:233258028|233259344:-_chr1:233261285|233261321:-_chr1:233262045|233262165:-_chr1:233262958|233263163:-_chr1:233295326|233295578:-","UN_PCNX2_LS0086","PCNX2","protein coding gene","no",0.91,0,0,0.003,31,0,0,"0(0)","TGCT","no","NA","TE_intersect_:233219637|chr1|233219637|233220716|L1MC1:L1:LINE|144|-","exon_intersect_chr1:233227226|233227371","intron_intersect_chr1:233218184|233227226"]
["chr1:233273137|233295326:-","chr1:233271338|233272002:-_chr1:233273104|233273137:-_chr1:233295326|233295737:-","UN_PCNX2_LS0105","PCNX2","protein coding gene","no",1.34,0,0,0.01,98,0,0,"0(0)","ESCA;STAD;TGCT","no","NA","TE_intersect_:233272015|chr1|233272015|233273154|L1PB1:L1:LINE|78|+","exon_intersect_chr1:233295325|233295727","intron_intersect_chr1:233263163|233288868"]
["chr1:233294503|233295326:-","chr1:233293795|233294503:-_chr1:233295326|233295560:-","UN_PCNX2_LS0108","PCNX2","protein coding gene","no",2.45,0,0,0.024,231,0,0,"0(0)","ESCA;LUSC;OV;STAD","no","NA","NA","exon_intersect_chr1:233295325|233295727","intron_intersect_chr1:233289447|233295325"]
["chr1:2334937|2336469:-","chr1:2332050|2334937:-_chr1:2336469|2336945:-","UN_MORN1_LS0012","MORN1","protein coding gene","no",1.58,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:2336469|2336548","intron_intersect_chr1:2332753|2336469"]
["chr1:2336850|2372481:-","chr1:2333849|2336548:-_chr1:2336717|2336850:-_chr1:2372481|2372591:-_chr1:2374461|2374557:-_chr1:2384978|2385065:-_chr1:2385807|2385897:-_chr1:2387419|2387529:-_chr1:2388239|2388316:-","UN_MORN1_LS0021","MORN1","protein coding gene","no",2.67,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:2371165|2372591","intron_intersect_chr1:2336850|2350414"]
["chr1:233702880|233707135:-","chr1:233696514|233699355:-_chr1:233702197|233702265:-_chr1:233702408|233702500:-_chr1:233702773|233702880:-_chr1:233707135|233707552:-","UN_RNU4-77P_UP_LS0044","RNU4-77P","small non-coding RNA gene","no",1.69,0,0,0.002,21,0,0,"0(0)","STAD","no","TE_intersect_:233706900|chr1|233706900|233707200|THE1D:ERVL-MaLR:LTR|130|-","TE_intersect_:233702552|chr1|233702552|233704186|L1MC5:L1:LINE|249|+","NA","NA"]
["chr1:233725727|233727661:-","chr1:233725274|233725727:-_chr1:233727661|233727785:-_chr1:233734791|233734861:-","UN_RNU4-77P_UP_LS0056","RNU4-77P","small non-coding RNA gene","no",9.03,0,0,0.002,22,0,0,"0(0)","TGCT","no","TE_intersect_:233725525|chr1|233725525|233729409|MER61-int:ERV1:LTR|102|-","TE_intersect_:233725525|chr1|233725525|233729409|MER61-int:ERV1:LTR|102|-","NA","NA"]
["chr1:233727785|233734791:-","chr1:233725274|233725727:-_chr1:233727661|233727785:-_chr1:233734791|233734861:-","UN_RNU4-77P_UP_LS0058","RNU4-77P","small non-coding RNA gene","no",4,0,0,0.002,19,0,0,"0(0)","TGCT","no","TE_intersect_:233734575|chr1|233734575|233735250|MER41B:ERV1:LTR|115|+","TE_intersect_:233725525|chr1|233725525|233729409|MER61-int:ERV1:LTR|102|-","NA","NA"]
["chr1:234157837|234164471:-","chr1:234156090|234157837:-_chr1:234164471|234164779:-","UN_SLC35F3_LS0015","SLC35F3","protein coding gene","no",4.3,0,0,0.004,36,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:234027227|234212606","intron_intersect_chr1:234027227|234212606"]
["chr1:234450566|234452683:-","chr1:234391598|234391745:-_chr1:234392416|234392552:-_chr1:234393362|234393486:-_chr1:234393646|234393837:-_chr1:234398382|234398553:-_chr1:234400853|234400948:-_chr1:234401181|234401262:-_chr1:234405903|234406099:-_chr1:234410445|234410531:-_chr1:234418084|234418233:-_chr1:234420702|234420812:-_chr1:234425673|234425793:-_chr1:234427317|234427388:-_chr1:234427576|234427766:-_chr1:234429136|234429324:-_chr1:234429416|234429677:-_chr1:234430087|234430301:-_chr1:234433410|234433571:-_chr1:234437275|234437372:-_chr1:234446803|234446975:-_chr1:234448480|234448576:-_chr1:234450428|234450566:-_chr1:234452683|234452793:-_chr1:234457667|234457756:-_chr1:234459230|234459326:-_chr1:234460261|234460396:-_chr1:234463837|234463934:-_chr1:234465656|234465708:-_chr1:234467502|234467650:-_chr1:234471188|234471257:-_chr1:234472714|234479103:-","UN_TARBP1_LS0048","TARBP1","protein coding gene","no",1.95,0,0,0.007,64,0,0,"0(0)","LAML","no","TE_intersect_:234452270|chr1|234452270|234453322|L1MC2:L1:LINE|156|+","NA","intron_intersect_chr1:234450566|234457667","intron_intersect_chr1:234450566|234457667"]
["chr1:234536481|234537325:-","chr1:234536121|234536481:-_chr1:234537325|234537469:-_chr1:234538688|234538988:-","UN_LINC01354_UP_LS0002","LINC01354","lncRNA gene","no",3.64,0,0,0.022,208,0,0,"0(0)","CESC;ESCA;HNSC;LUSC","no","NA","NA","NA","NA"]
["chr1:234537469|234538632:-","chr1:234536247|234536481:-_chr1:234537325|234537469:-_chr1:234538632|234538858:-","UN_LINC01354_UP_LS0003","LINC01354","lncRNA gene","no",2.67,0,0,0.004,42,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr1:234602922|234606958:-","chr1:234600522|234602922:-_chr1:234606958|234612104:-","UN_LINC01354_UP_LS0010","LINC01354","lncRNA gene","no",2.65,0.03,0,0.001,11,0.001,1,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:234604269|234607852","NA"]
["chr1:234609174|234609265:+","chr1:234608095|234608838:+_chr1:234608985|234609174:+_chr1:234609265|234609465:+_chr1:234609635|234610221:+","UN_IRF2BP2_LS0084","IRF2BP2","protein coding gene","no",3.67,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:234608447|234609525","exon_intersect_chr1:234608447|234609525"]
["chr1:234622101|234634534:-","chr1:234619482|234622101:-_chr1:234634534|234634720:-_chr1:234636474|234636693:-_chr1:234650435|234650622:-","UN_IRF2BP2_UP_LS0003","IRF2BP2","protein coding gene","no",2.16,0,0,0.005,52,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:234632948|234634780","NA"]
["chr1:234634720|234636474:-","chr1:234619482|234622101:-_chr1:234634534|234634720:-_chr1:234636474|234636693:-_chr1:234650435|234650622:-","UN_IRF2BP2_UP_LS0006","IRF2BP2","protein coding gene","no",2.44,0,0,0.003,30,0,0,"0(0)","ESCA","no","NA","TE_intersect_:234634656|chr1|234634656|234634750|L2c:L2:LINE|326|+","NA","exon_intersect_chr1:234632948|234634780"]
["chr1:234636647|234636982:+","chr1:234629311|234629341:+_chr1:234629609|234629747:+_chr1:234636482|234636647:+_chr1:234636982|234637392:+","UN_AL160408.5_UP_LS0007","AL160408.5","lncRNA gene","no",2.9,0,0,0.001,14,0,0,"0(0)","DLBC","no","NA","TE_intersect_:234636957|chr1|234636957|234637260|AluSz:Alu:SINE|92|-","NA","NA"]
["chr1:234655967|234656104:+","chr1:234655791|234655967:+_chr1:234656104|234656233:+_chr1:234682692|234683198:+","UN_AL160408.1_LS0007","AL160408.1","lncRNA gene","no",4.49,0,0,0.002,19,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:234655464|234656108","intron_intersect_chr1:234655464|234656108"]
["chr1:234656233|234660681:+","chr1:234656125|234656233:+_chr1:234660681|234660909:+_chr1:234664842|234664903:+_chr1:234666332|234667106:+","UN_AL160408.1_LS0010","AL160408.1","lncRNA gene","no",2.52,0,0,0.006,60,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:234656233|234660134","exon_intersect_chr1:234660134|234660924"]
["chr1:234656233|234664842:+","chr1:234656125|234656233:+_chr1:234664842|234664903:+_chr1:234666332|234667074:+","UN_AL160408.1_LS0011","AL160408.1","lncRNA gene","no",2.93,0,0,0.005,52,0,0,"0(0)","KICH","no","NA","TE_intersect_:234664550|chr1|234664550|234665072|MER1A:hAT-Charlie:DNA|97|+","intron_intersect_chr1:234656233|234660134","exon_intersect_chr1:234664842|234664903"]
["chr1:234717257|234722073:-","chr1:234714895|234717257:-_chr1:234722073|234723261:-","UN_AL160408.3_UP_LS0005","AL160408.3","lncRNA gene","no",3.04,0,0,0.005,50,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr1:234725678|234726879:+","chr1:234725245|234725678:+_chr1:234726879|234727072:+","LINC01132_LS001","LINC01132","lncRNA gene","no",2.27,0,0,0.003,25,0,0,"0(0)","THYM","yes","NA","NA","intron_intersect_chr1:234725678|234728348","intron_intersect_chr1:234725678|234728348"]
["chr1:234747550|234748093:-","chr1:234733884|234736419:-_chr1:234745740|234746391:-_chr1:234746864|234747003:-_chr1:234747438|234747550:-_chr1:234748093|234748319:-","UN_AL160408.3_UP_LS0014","AL160408.3","lncRNA gene","no",2.83,0,0,0.004,39,0,0,"0(0)","LGG","no","NA","TE_intersect_:234747481|chr1|234747481|234747673|MIRc:MIR:SINE|271|+","NA","NA"]
["chr1:234835048|234835897:-","chr1:234832374|234835048:-_chr1:234835897|234836021:-_chr1:234869178|234869664:-","UN_AL360294.1_UP_LS0012","AL360294.1","lncRNA gene","no",3.19,0,0,0.011,103,0,0,"0(0)","ESCA;LUAD","no","NA","NA","NA","NA"]
["chr1:234836021|234869178:-","chr1:234832374|234835048:-_chr1:234835897|234836021:-_chr1:234869178|234869664:-","UN_AL360294.1_UP_LS0013","AL360294.1","lncRNA gene","no",3.01,0,0,0.009,91,0,0,"0(0)","LUAD","no","NA","NA","NA","NA"]
["chr1:234868061|234869178:-","chr1:234867928|234868061:-_chr1:234869178|234869645:-","UN_AL360294.1_UP_LS0021","AL360294.1","lncRNA gene","no",8,0,0,0.006,60,0,0,"0(0)","ESCA;STAD","no","NA","TE_intersect_:234867937|chr1|234867937|234868082|AluYc:Alu:SINE|62|+","NA","NA"]
["chr1:234953979|234955107:+","chr1:234953857|234953979:+_chr1:234955107|234955204:+_chr1:234957231|234957360:+_chr1:234959697|234961372:+","UN_AL391832.1_UP_LS0009","AL391832.1","lncRNA gene","no",2.72,0,0,0.004,36,0,0,"0(0)","DLBC;LIHC","no","NA","NA","NA","NA"]
["chr1:234953979|234957231:+","chr1:234953821|234953979:+_chr1:234957231|234957360:+_chr1:234959697|234959989:+","UN_AL391832.1_UP_LS0010","AL391832.1","lncRNA gene","no",2.61,0,0,0.001,12,0,0,"0(0)","DLBC","no","NA","NA","NA","exon_intersect_chr1:234957231|234957360"]
["chr1:234955204|234957231:+","chr1:234953857|234953979:+_chr1:234955107|234955204:+_chr1:234957231|234957360:+_chr1:234959697|234961372:+","UN_AL391832.1_UP_LS0011","AL391832.1","lncRNA gene","no",4.95,0,0,0.004,42,0,0,"0(0)","DLBC;LIHC","no","NA","NA","NA","exon_intersect_chr1:234957231|234957360"]
["chr1:234998721|234999439:+","chr1:234998488|234998721:+_chr1:234999439|235001055:+","UN_RPL23AP23_UP_LS0004","RPL23AP23","pseudogene","no",2.06,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:235008215|235008813:-","chr1:235007884|235008215:-_chr1:235008813|235008907:-","UN_AL391832.3_UP_LS0001","AL391832.3","lncRNA gene","no",4.13,0,0,0.002,16,0,0,"0(0)","DLBC","no","TE_intersect_:235008729|chr1|235008729|235009098|THE1B:ERVL-MaLR:LTR|124|-","TE_intersect_:235008198|chr1|235008198|235008569|L1MB3:L1:LINE|181|+","NA","NA"]
["chr1:235110469|235111055:+","chr1:235110381|235110469:+_chr1:235111055|235111201:+","UN_TOMM20_LS0019","TOMM20","protein coding gene","no",0.64,0,0,0.002,21,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr1:235109336|235112108","exon_intersect_chr1:235109336|235112108"]
["chr1:235404503|235414433:+","chr1:235404375|235404503:+_chr1:235414433|235414618:+_chr1:235419473|235419561:+_chr1:235427140|235427239:+_chr1:235430705|235430804:+_chr1:235434204|235434280:+_chr1:235435745|235435840:+_chr1:235436386|235436450:+_chr1:235436544|235436608:+_chr1:235437322|235437474:+_chr1:235438769|235438922:+_chr1:235441814|235441882:+_chr1:235442852|235442911:+_chr1:235448349|235448440:+_chr1:235448670|235448966:+","UN_TBCE_LS0036","TBCE","protein coding gene","no",2.63,0,0,0.004,35,0,0,"0(0)","MESO","no","TE_intersect_:235404429|chr1|235404429|235404669|Tigger3b:TcMar-Tigger:DNA|104|-","NA","intron_intersect_chr1:235401587|235414433","exon_intersect_chr1:235414433|235414618"]
["chr1:235423781|235427140:+","chr1:235423532|235423781:+_chr1:235427140|235427239:+_chr1:235430705|235430804:+_chr1:235434204|235434280:+_chr1:235435745|235435840:+_chr1:235436386|235436450:+_chr1:235436544|235436608:+_chr1:235437322|235437474:+_chr1:235438769|235438922:+_chr1:235441814|235441882:+_chr1:235442852|235442911:+_chr1:235448349|235448440:+_chr1:235448670|235448966:+","TBCE_LS038","TBCE","protein coding gene","no",5.43,0,0,0.005,44,0,0,"0(0)","THYM","yes","TE_intersect_:235423745|chr1|235423745|235423794|MER58D:hAT-Charlie:DNA|149|-","NA","intron_intersect_chr1:235419561|235427140","exon_intersect_chr1:235427140|235427239"]
["chr1:235427239|235434204:+","chr1:235367449|235367552:+_chr1:235380019|235380149:+_chr1:235414433|235414618:+_chr1:235419473|235419561:+_chr1:235427140|235427239:+_chr1:235434204|235434280:+_chr1:235435745|235435840:+_chr1:235436386|235436450:+_chr1:235436544|235436608:+_chr1:235437322|235437474:+_chr1:235438769|235438922:+_chr1:235441814|235441882:+_chr1:235442852|235442911:+_chr1:235448349|235448966:+","TBCE_LS041","TBCE","protein coding gene","no",1.56,0,0,0.007,64,0,0,"0(0)","LAML","yes","NA","NA","intron_intersect_chr1:235427239|235430705","exon_intersect_chr1:235434204|235434280"]
["chr1:235503901|235504141:-","chr1:235454212|235454315:-_chr1:235455559|235455684:-_chr1:235458603|235458786:-_chr1:235465636|235465714:-_chr1:235470850|235470960:-_chr1:235480054|235480149:-_chr1:235484322|235484515:-_chr1:235489168|235489268:-_chr1:235494681|235494828:-_chr1:235496186|235496308:-_chr1:235503688|235503901:-_chr1:235504141|235504254:-","UN_B3GALNT2_LS0033","B3GALNT2","protein coding gene","no",1.17,0,0,0.012,119,0,0,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chr1:235504141|235504481","intron_intersect_chr1:235496308|235504141"]
["chr1:235655075|235657023:-","chr1:235654645|235655075:-_chr1:235657023|235657443:-","UN_GNG4_UP_LS0003","GNG4","protein coding gene","no",3.2,0,0,0.003,28,0,0,"0(0)","TGCT","no","NA","TE_intersect_:235654938|chr1|235654938|235655283|L1MEc:L1:LINE|313|-","NA","NA"]
["chr1:235714623|235716759:+","chr1:235714394|235714623:+_chr1:235716759|235716862:+_chr1:235717466|235717680:+_chr1:235718380|235720638:+","UN_LYST_LS0015","LYST","protein coding gene","no",3.64,0,0,0.005,45,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:235713176|235715201","exon_intersect_chr1:235716712|235716778"]
["chr1:235716862|235717466:+","chr1:235714394|235714623:+_chr1:235716759|235716862:+_chr1:235717466|235717680:+_chr1:235718380|235720638:+","UN_LYST_LS0018","LYST","protein coding gene","no",3.91,0,0,0.005,49,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:235716778|235720661","intron_intersect_chr1:235716778|235720661"]
["chr1:235717680|235718380:+","chr1:235714394|235714623:+_chr1:235716759|235716862:+_chr1:235717466|235717680:+_chr1:235718380|235720638:+","UN_LYST_LS0020","LYST","protein coding gene","no",4.73,0,0,0.004,36,0,0,"0(0)","PRAD","no","NA","TE_intersect_:235718363|chr1|235718363|235718560|AluSx:Alu:SINE|127|-","intron_intersect_chr1:235716778|235720661","intron_intersect_chr1:235716778|235720661"]
["chr1:235740661|235741422:-","chr1:235738991|235740661:-_chr1:235741422|235741628:-_chr1:235743979|235744157:-_chr1:235746336|235746527:-_chr1:235751210|235751362:-_chr1:235752005|235752171:-","UN_LYST_LS0031","LYST","protein coding gene","no",28.45,0,0,0.003,31,0,0,"0(0)","LAML","no","NA","TE_intersect_:235740264|chr1|235740264|235740921|L1ME2:L1:LINE|212|-","exon_intersect_chr1:235741422|235741628","intron_intersect_chr1:235738989|235741422"]
["chr1:235820528|235826841:-","chr1:235820355|235820528:-_chr1:235826841|235827025:-","UN_LYST_LS0060","LYST","protein coding gene","no",1.91,0,0,0.003,26,0,0,"0(0)","STAD","no","TE_intersect_:235826682|chr1|235826682|235826967|AluJb:Alu:SINE|154|-","TE_intersect_:235820357|chr1|235820357|235820670|AluJb:Alu:SINE|160|-","intron_intersect_chr1:235813061|235828805","intron_intersect_chr1:235813061|235828805"]
["chr1:235833667|235865056:-","chr1:235759175|235759599:-_chr1:235762720|235762851:-_chr1:235766079|235766277:-_chr1:235770160|235770297:-_chr1:235773842|235773991:-_chr1:235774913|235775086:-_chr1:235777063|235777308:-_chr1:235780865|235781055:-_chr1:235781927|235782087:-_chr1:235787200|235787373:-_chr1:235788701|235788845:-_chr1:235791699|235792125:-_chr1:235793503|235793612:-_chr1:235800320|235800386:-_chr1:235800871|235801097:-_chr1:235802908|235803064:-_chr1:235804504|235804665:-_chr1:235805743|235806772:-_chr1:235808455|235810534:-_chr1:235812971|235813061:-_chr1:235830226|235830424:-_chr1:235833578|235833667:-_chr1:235865056|235866876:-","UN_LYST_LS0069","LYST","protein coding gene","no",3.53,0,0,0.008,80,0,0,"0(0)","LAML;SKCM","no","TE_intersect_:235864944|chr1|235864944|235865509|L2a:L2:LINE|261|+","NA","intron_intersect_chr1:235853060|235866843","intron_intersect_chr1:235833667|235839483"]
["chr1:235873025|235883187:-","chr1:235871962|235872575:-_chr1:235872661|235873025:-_chr1:235883187|235883616:-","UN_LYST_LS0080","LYST","protein coding gene","no",4.2,0,0,0.01,95,0,0,"0(0)","SKCM","no","NA","TE_intersect_:235872931|chr1|235872931|235873178|MER39:ERV1:LTR|183|-","exon_intersect_chr1:235883187|235883640","intron_intersect_chr1:235866924|235883187"]
["chr1:235873029|235883187:-","chr1:235871962|235872575:-_chr1:235872661|235873029:-_chr1:235883187|235883616:-","UN_LYST_LS0082","LYST","protein coding gene","no",4.41,0,0,0.018,177,0,0,"0(0)","SKCM","no","NA","TE_intersect_:235872931|chr1|235872931|235873178|MER39:ERV1:LTR|183|-","exon_intersect_chr1:235883187|235883640","intron_intersect_chr1:235866924|235883187"]
["chr1:235883366|235909575:-","chr1:235871963|235872575:-_chr1:235883187|235883366:-_chr1:235909575|235909789:-","UN_MIR1537_UP_LS0005","MIR1537","small non-coding RNA gene","no",2.68,0,0,0.016,154,0,0,"0(0)","HNSC;LUAD;SKCM","no","NA","NA","NA","exon_intersect_chr1:235883187|235883640"]
["chr1:235990925|236000401:+","chr1:235968535|235971645:+_chr1:235990839|235990925:+_chr1:236000401|236000741:+","UN_NID1_LS0034","NID1","protein coding gene","no",1.47,0,0,0.003,24,0,0,"0(0)","LIHC","no","NA","TE_intersect_:236000259|chr1|236000259|236000707|MER4B:ERV1:LTR|91|+","exon_intersect_chr1:235990886|235991058","intron_intersect_chr1:235993872|236011921"]
["chr1:235993872|236017148:-","chr1:235975830|235977988:-_chr1:235978995|235979107:-_chr1:235979822|235979945:-_chr1:235980496|235980653:-_chr1:235981611|235981782:-_chr1:235985379|235985505:-_chr1:235990886|235991058:-_chr1:235993645|235993872:-_chr1:236017148|236017273:-_chr1:236024070|236024213:-_chr1:236025896|236026141:-_chr1:236029550|236029750:-_chr1:236032401|236032652:-_chr1:236038104|236038253:-_chr1:236041910|236042292:-_chr1:236045457|236045683:-_chr1:236048690|236048989:-_chr1:236064855|236065109:-","UN_NID1_LS0040","NID1","protein coding gene","no",2.42,0,0,0.006,56,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr1:236017148|236017273","intron_intersect_chr1:235993872|236011921"]
["chr1:236025659|236025905:+","chr1:236025646|236025659:+_chr1:236025905|236026119:+","UN_NID1_LS0048","NID1","protein coding gene","no",1.58,0,0,0.006,60,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:236024213|236025896","exon_intersect_chr1:236025896|236026141"]
["chr1:236026058|236027299:+","chr1:236025004|236025659:+_chr1:236025905|236026058:+_chr1:236027299|236028061:+","UN_NID1_LS0050","NID1","protein coding gene","no",1.84,0,0,0.007,69,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr1:236025896|236026141","intron_intersect_chr1:236026141|236029550"]
["chr1:236083908|236084064:-","chr1:235975830|235977988:-_chr1:235978995|235979107:-_chr1:235979822|235979945:-_chr1:235980496|235980653:-_chr1:235981611|235981782:-_chr1:235985379|235985505:-_chr1:235990886|235991058:-_chr1:235993645|235993872:-_chr1:236011921|236012043:-_chr1:236013411|236013560:-_chr1:236017148|236017273:-_chr1:236024070|236024213:-_chr1:236025896|236026141:-_chr1:236029550|236029750:-_chr1:236032401|236032652:-_chr1:236038104|236038253:-_chr1:236041910|236042292:-_chr1:236045457|236045683:-_chr1:236048690|236048989:-_chr1:236064855|236065524:-_chr1:236083794|236083908:-_chr1:236084064|236084082:-","UN_NID1_UP_LS0004","NID1","protein coding gene","no",1.14,0,0,0.004,38,0,0,"0(0)","STAD","no","NA","NA","NA","NA"]
["chr1:236113544|236128819:-","chr1:236112627|236113544:-_chr1:236128819|236129549:-","UN_NID1_UP_LS0006","NID1","protein coding gene","no",2.59,0,0,0.003,32,0,0,"0(0)","GBM","no","NA","TE_intersect_:236113515|chr1|236113515|236113622|L2b:L2:LINE|349|-","NA","NA"]
["chr1:236465118|236466123:-","chr1:236463105|236465118:-_chr1:236466123|236466235:-","UN_EDARADD_LS0019","EDARADD","protein coding gene","no",2.22,0,0,0.005,48,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr1:236427450|236468231","intron_intersect_chr1:236427450|236468231"]
["chr1:236557345|236557588:-","chr1:236550671|236550990:-_chr1:236551999|236552107:-_chr1:236553581|236553739:-_chr1:236554598|236554752:-_chr1:236555296|236555464:-_chr1:236555551|236555655:-_chr1:236555805|236555939:-_chr1:236556100|236556258:-_chr1:236557195|236557345:-_chr1:236557588|236558089:-","UN_HEATR1_LS0017","HEATR1","protein coding gene","no",3.44,0,0,0.001,13,0,0,"0(0)","MESO","no","TE_intersect_:236557554|chr1|236557554|236557755|MIRb:MIR:SINE|301|-","NA","intron_intersect_chr1:236557345|236558237","intron_intersect_chr1:236557345|236558237"]
["chr1:236706619|236717858:+","chr1:236706416|236706619:+_chr1:236717858|236717972:+_chr1:236718894|236719013:+_chr1:236720105|236720191:+_chr1:236725933|236726020:+_chr1:236731233|236731314:+_chr1:236735635|236735720:+_chr1:236737122|236737214:+_chr1:236739302|236739532:+_chr1:236742896|236743043:+_chr1:236744626|236744769:+","UN_ACTN2_LS0002","ACTN2","protein coding gene","no",2.21,0,0,0.006,59,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:236686799|236717858","exon_intersect_chr1:236717858|236717972"]
["chr1:236735521|236737122:+","chr1:236735374|236735521:+_chr1:236737122|236737214:+_chr1:236739302|236739532:+_chr1:236742896|236743043:+_chr1:236744626|236744776:+_chr1:236747667|236747775:+_chr1:236749124|236749264:+_chr1:236751470|236751652:+_chr1:236753947|236754081:+_chr1:236755019|236755198:+_chr1:236757486|236757632:+_chr1:236759724|236759789:+_chr1:236761015|236761173:+_chr1:236762461|236764463:+","UN_ACTN2_LS0005","ACTN2","protein coding gene","no",1.4,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:236734518|236735635","exon_intersect_chr1:236737019|236737214"]
["chr1:236760896|236761015:+","chr1:236760751|236760896:+_chr1:236761015|236761173:+_chr1:236762461|236764631:+","UN_ACTN2_LS0012","ACTN2","protein coding gene","no",9.56,0,0,0.002,15,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr1:236759789|236761015","exon_intersect_chr1:236761015|236761173"]
["chr1:237127426|237127576:-","chr1:237126803|237127426:-_chr1:237127576|237128210:-","UN_RYR2_LS0002","RYR2","protein coding gene","no",0.92,0,0,0.002,20,0,0,"0(0)","ESCA","no","TE_intersect_:237126779|chr1|237126779|237128383|SVA_F:SVA:Retroposon|28|-","TE_intersect_:237126779|chr1|237126779|237128383|SVA_F:SVA:Retroposon|28|-","intron_intersect_chr1:237121109|237270497","intron_intersect_chr1:237121109|237270497"]
["chr1:237903882|237903974:+","chr1:237903528|237903882:+_chr1:237903974|237904866:+","UN_AL359924.1_LS0002","AL359924.1","lncRNA gene","no",3.32,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:237890922|237903974","exon_intersect_chr1:237903974|237904122"]
["chr1:237907175|237920878:+","chr1:237901973|237902095:+_chr1:237903974|237904122:+_chr1:237905427|237905601:+_chr1:237905937|237906110:+_chr1:237906947|237907175:+_chr1:237920878|237921058:+_chr1:237921245|237921316:+_chr1:237926749|237930845:+","UN_AL359924.1_LS0003","AL359924.1","lncRNA gene","no",6.68,0,0,0.003,24,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:237907175|237916233","exon_intersect_chr1:237920878|237921058"]
["chr1:237942026|238000418:+","chr1:237941891|237942026:+_chr1:238000418|238000515:+_chr1:238061320|238062431:+","UN_AL356010.2_UP_LS0002","AL356010.2","lncRNA gene","no",4.61,0,0,0.002,19,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:23794836|23794915:-","chr1:23794424|23794587:-_chr1:23794722|23794836:-_chr1:23794915|23795076:-_chr1:23795161|23795303:-","UN_LYPLA2_LS0035","LYPLA2","protein coding gene","no",5.24,0,0,0.007,69,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:23794224|23795539","exon_intersect_chr1:23794224|23795539"]
["chr1:23795040|23795087:-","chr1:23794774|23795040:-_chr1:23795087|23795329:-","UN_LYPLA2_LS0070","LYPLA2","protein coding gene","no",10.95,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:23794224|23795539","exon_intersect_chr1:23794224|23795539"]
["chr1:23795048|23795087:-","chr1:23794423|23794587:-_chr1:23794722|23795048:-_chr1:23795087|23795211:-_chr1:23795267|23795464:-","UN_LYPLA2_LS0071","LYPLA2","protein coding gene","no",8.68,0,0,0.007,66,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:23794224|23795539","exon_intersect_chr1:23794224|23795539"]
["chr1:238000515|238061320:+","chr1:237941891|237942026:+_chr1:238000418|238000515:+_chr1:238061320|238062431:+","UN_AL356010.2_UP_LS0006","AL356010.2","lncRNA gene","no",3.33,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","TE_intersect_:238061132|chr1|238061132|238061428|AluJr:Alu:SINE|186|-","NA","NA"]
["chr1:238239012|238276037:+","chr1:238238918|238239012:+_chr1:238276037|238276159:+_chr1:238325765|238325833:+_chr1:238326212|238326264:+","UN_AL356010.2_UP_LS0013","AL356010.2","lncRNA gene","no",3.25,0,0,0.004,40,0,0,"0(0)","TGCT","no","TE_intersect_:238238520|chr1|238238520|238239036|MER54A:ERVL:LTR|179|-","NA","NA","exon_intersect_chr1:238276037|238276159"]
["chr1:238239382|238276037:+","chr1:238239160|238239382:+_chr1:238276037|238276159:+_chr1:238325765|238325833:+_chr1:238326212|238326264:+","UN_AL356010.2_UP_LS0014","AL356010.2","lncRNA gene","no",1.98,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:238239363|chr1|238239363|238239577|MER54A:ERVL:LTR|179|-","NA","NA","exon_intersect_chr1:238276037|238276159"]
["chr1:238276159|238325765:+","chr1:237947134|237947233:+_chr1:238000418|238000515:+_chr1:238276037|238276159:+_chr1:238325765|238325833:+_chr1:238326212|238326264:+","UN_AL359551.1_UP_LS0006","AL359551.1","lncRNA gene","no",4.35,0,0,0.006,56,0,0,"0(0)","TGCT","no","TE_intersect_:238276116|chr1|238276116|238276672|LTR7B:ERV1:LTR|84|-","TE_intersect_:238325686|chr1|238325686|238325769|U6:snRNA:snRNA|157|-","intron_intersect_chr1:238276159|238286943","exon_intersect_chr1:238325687|238325788"]
["chr1:238276194|238325765:+","chr1:238238901|238239012:+_chr1:238276037|238276194:+_chr1:238325765|238325833:+_chr1:238326212|238326274:+_chr1:238425438|238425511:+_chr1:238444736|238445722:+","UN_AL359551.1_UP_LS0007","AL359551.1","lncRNA gene","no",2.74,0,0,0.003,32,0,0,"0(0)","TGCT","no","TE_intersect_:238276116|chr1|238276116|238276672|LTR7B:ERV1:LTR|84|-","TE_intersect_:238325686|chr1|238325686|238325769|U6:snRNA:snRNA|157|-","intron_intersect_chr1:238276159|238286943","exon_intersect_chr1:238325687|238325788"]
["chr1:238325833|238326212:+","chr1:238062433|238062886:+_chr1:238325765|238325833:+_chr1:238326212|238326314:+","UN_AL359551.1_UP_LS0011","AL359551.1","lncRNA gene","no",6.02,0,0,0.014,137,0,0,"0(0)","ESCA;TGCT;THYM","no","TE_intersect_:238325769|chr1|238325769|238326213|LTR3B:ERVK:LTR|110|-","TE_intersect_:238325769|chr1|238325769|238326213|LTR3B:ERVK:LTR|110|-","NA","NA"]
["chr1:238326274|238425438:+","chr1:238324733|238324833:+_chr1:238325765|238325833:+_chr1:238326212|238326274:+_chr1:238425438|238425511:+_chr1:238444736|238445763:+","UN_AL359551.1_UP_LS0016","AL359551.1","lncRNA gene","no",4.49,0.04,0,0.003,28,0.001,1,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:238590536|238617141:+","chr1:238590385|238590536:+_chr1:238617141|238617189:+_chr1:238624812|238626324:+","UN_CHRM3_UP_LS0002","CHRM3","protein coding gene","no",3.89,0,0,0.004,39,0,0,"0(0)","SARC","no","NA","NA","NA","NA"]
["chr1:238617189|238621896:+","chr1:238617139|238617189:+_chr1:238621896|238621942:+_chr1:238624812|238627460:+","UN_CHRM3_UP_LS0004","CHRM3","protein coding gene","no",3.98,0,0,0.003,29,0,0,"0(0)","SARC","no","NA","NA","NA","NA"]
["chr1:238621942|238624812:+","chr1:238617139|238617189:+_chr1:238621896|238621942:+_chr1:238624812|238627460:+","UN_CHRM3_UP_LS0007","CHRM3","protein coding gene","no",2.29,0,0,0.004,35,0,0,"0(0)","SARC","no","NA","TE_intersect_:238624751|chr1|238624751|238624933|L2a:L2:LINE|305|+","NA","NA"]
["chr1:23865625|23866657:-","chr1:23845077|23845855:-_chr1:23846074|23846173:-_chr1:23848649|23848839:-_chr1:23854360|23854560:-_chr1:23859798|23859903:-_chr1:23863134|23863271:-_chr1:23865491|23865625:-_chr1:23866657|23868277:-","UN_FUCA1_LS0014","FUCA1","protein coding gene","no",3.82,0,0,0.011,106,0,0,"0(0)","LAML","no","TE_intersect_:23866548|chr1|23866548|23866713|MER58C:hAT-Charlie:DNA|171|-","NA","intron_intersect_chr1:23865625|23867898","intron_intersect_chr1:23865625|23867898"]
["chr1:23879604|23883145:-","chr1:23873092|23875662:-_chr1:23879504|23879604:-_chr1:23883145|23883728:-","UN_CNR2_LS0006","CNR2","protein coding gene","yes",3.71,0,0,0.001,12,0,0,"0(0)","DLBC","no","TE_intersect_:23883110|chr1|23883110|23883542|L1ME3A:L1:LINE|223|+","TE_intersect_:23879332|chr1|23879332|23879642|AluJb:Alu:SINE|206|+","intron_intersect_chr1:23875662|23901471","intron_intersect_chr1:23875662|23901471"]
["chr1:23879604|23913246:-","chr1:23870526|23875662:-_chr1:23879504|23879604:-_chr1:23913246|23913362:-","UN_CNR2_LS0007","CNR2","protein coding gene","yes",1.95,0,0,0.001,11,0,0,"0(0)","DLBC","no","NA","TE_intersect_:23879332|chr1|23879332|23879642|AluJb:Alu:SINE|206|+","exon_intersect_chr1:23913246|23913362","intron_intersect_chr1:23875662|23901471"]
["chr1:23934569|23934999:+","chr1:23934434|23934569:+_chr1:23934999|23936598:+","UN_PNRC2_UP_LS0002","PNRC2","protein coding gene","no",3.46,0,0,0.002,23,0,0,"0(0)","TGCT","no","TE_intersect_:23934406|chr1|23934406|23934706|AluSx1:Alu:SINE|133|-","TE_intersect_:23934958|chr1|23934958|23936501|SVA_D:SVA:Retroposon|34|+","NA","NA"]
["chr1:23957127|23960929:+","chr1:23956978|23957127:+_chr1:23960929|23961134:+_chr1:23961440|23963462:+","PNRC2_LS001","PNRC2","protein coding gene","no",13.67,0,0,0.002,16,0,0,"0(0)","KICH","yes","NA","NA","NA","exon_intersect_chr1:23960929|23961134"]
["chr1:23963019|24040285:+","chr1:23959828|23959998:+_chr1:23960929|23963019:+_chr1:24040285|24040298:+","UN_AL591178.1_UP_LS0004","AL591178.1","lncRNA gene","no",5.82,0,0,0.003,31,0,0,"0(0)","OV","no","NA","TE_intersect_:24039802|chr1|24039802|24040678|L1MB3:L1:LINE|142|+","exon_intersect_chr1:23961440|23963462","NA"]
["chr1:23986625|23992808:+","chr1:23986544|23986625:+_chr1:23992808|23993040:+_chr1:24031748|24031921:+","UN_AL591178.1_UP_LS0010","AL591178.1","lncRNA gene","no",0.76,0,0,0.004,42,0,0,"0(0)","ESCA","no","TE_intersect_:23986536|chr1|23986536|23987324|SVA_C:SVA:Retroposon|61|-","TE_intersect_:23992715|chr1|23992715|23994960|SVA_F:SVA:Retroposon|93|-","NA","NA"]
["chr1:23987055|23993240:-","chr1:23986907|23987055:-_chr1:23993240|23993445:-_chr1:23994224|23994268:-_chr1:23994367|23994618:-_chr1:24032230|24032710:-","UN_SRSF10_UP_LS0001","SRSF10","protein coding gene","no",1.84,0,0,0.004,35,0,0,"0(0)","ESCA","no","TE_intersect_:23992715|chr1|23992715|23994960|SVA_F:SVA:Retroposon|93|-","TE_intersect_:23986536|chr1|23986536|23987324|SVA_C:SVA:Retroposon|61|-","NA","NA"]
["chr1:23993363|24032069:-","chr1:23993179|23993363:-_chr1:24032069|24032722:-","UN_SRSF10_UP_LS0005","SRSF10","protein coding gene","no",0.9,0,0,0.008,77,0,0,"0(0)","ESCA;OV","no","TE_intersect_:24031429|chr1|24031429|24032897|SVA_A:SVA:Retroposon|67|-","TE_intersect_:23992715|chr1|23992715|23994960|SVA_F:SVA:Retroposon|93|-","NA","NA"]
["chr1:23993492|24032069:-","chr1:23993129|23993492:-_chr1:24032069|24033062:-","UN_SRSF10_UP_LS0007","SRSF10","protein coding gene","no",0.65,0,0,0.004,37,0,0,"0(0)","OV","no","TE_intersect_:24031429|chr1|24031429|24032897|SVA_A:SVA:Retroposon|67|-","TE_intersect_:23992715|chr1|23992715|23994960|SVA_F:SVA:Retroposon|93|-","NA","NA"]
["chr1:23993670|24032069:-","chr1:23993583|23993670:-_chr1:24032069|24032728:-","UN_SRSF10_UP_LS0010","SRSF10","protein coding gene","no",0.4,0,0,0.006,59,0,0,"0(0)","ESCA;OV","no","TE_intersect_:24031429|chr1|24031429|24032897|SVA_A:SVA:Retroposon|67|-","TE_intersect_:23992715|chr1|23992715|23994960|SVA_F:SVA:Retroposon|93|-","NA","NA"]
["chr1:23994618|24032230:-","chr1:23994398|23994618:-_chr1:24032230|24032687:-","UN_SRSF10_UP_LS0018","SRSF10","protein coding gene","no",1.79,0,0,0.005,50,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:24031429|chr1|24031429|24032897|SVA_A:SVA:Retroposon|67|-","TE_intersect_:23992715|chr1|23992715|23994960|SVA_F:SVA:Retroposon|93|-","NA","NA"]
["chr1:240014455|240033322:+","chr1:240014253|240014455:+_chr1:240033322|240036456:+","UN_FMN2_LS0001","FMN2","protein coding gene","no",2.81,0,0,0.001,12,0,0,"0(0)","PCPG","no","NA","TE_intersect_:240032725|chr1|240032725|240033332|ERVL-E-int:ERVL:LTR|337|+","intron_intersect_chr1:240014435|240068028","intron_intersect_chr1:240014435|240068028"]
["chr1:240014455|240067040:+","chr1:240014285|240014455:+_chr1:240067040|240067101:+_chr1:240067975|240068177:+","UN_FMN2_LS0002","FMN2","protein coding gene","no",16.78,0,0,0.015,145,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:240014435|240068028","intron_intersect_chr1:240014435|240068028"]
["chr1:240014455|240123179:+","chr1:240014348|240014455:+_chr1:240123179|240123345:+_chr1:240177921|240178068:+_chr1:240180169|240180180:+_chr1:240188207|240188262:+_chr1:240206799|240208732:+_chr1:240211091|240211235:+_chr1:240257945|240258032:+_chr1:240294822|240294883:+_chr1:240329076|240329167:+_chr1:240329339|240329468:+_chr1:240330603|240330749:+_chr1:240333887|240333946:+_chr1:240334109|240334229:+_chr1:240355816|240355908:+_chr1:240392511|240392562:+_chr1:240438061|240438210:+_chr1:240472372|240472453:+_chr1:240474128|240475180:+","UN_FMN2_LS0004","FMN2","protein coding gene","no",1.84,0,0,0.001,12,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:240014435|240068028","exon_intersect_chr1:240123179|240123345"]
["chr1:24003957|24010507:+","chr1:24003727|24003957:+_chr1:24010507|24010575:+_chr1:24023667|24023761:+_chr1:24028878|24028975:+_chr1:24040850|24041053:+","UN_AL591178.1_UP_LS0021","AL591178.1","lncRNA gene","no",1.49,0,0,0.003,27,0,0,"0(0)","TGCT","no","NA","TE_intersect_:24010364|chr1|24010364|24010546|MIRb:MIR:SINE|299|+","NA","NA"]
["chr1:240067097|240067975:+","chr1:240014285|240014455:+_chr1:240067040|240067097:+_chr1:240067975|240068177:+","UN_FMN2_LS0005","FMN2","protein coding gene","no",4.46,0,0,0.006,56,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:240014435|240068028","intron_intersect_chr1:240014435|240068028"]
["chr1:240067101|240067975:+","chr1:240014285|240014455:+_chr1:240067040|240067101:+_chr1:240067975|240068177:+","UN_FMN2_LS0006","FMN2","protein coding gene","no",6.46,0,0,0.015,145,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:240014435|240068028","intron_intersect_chr1:240014435|240068028"]
["chr1:240116274|240123179:+","chr1:240116185|240116274:+_chr1:240123179|240123345:+_chr1:240177921|240178068:+_chr1:240188207|240188262:+_chr1:240206799|240208732:+_chr1:240211091|240211235:+_chr1:240257945|240258032:+_chr1:240294822|240294883:+_chr1:240329076|240329167:+_chr1:240329339|240329468:+_chr1:240330603|240330749:+_chr1:240333887|240333946:+_chr1:240334109|240334229:+_chr1:240355816|240355908:+_chr1:240392511|240392562:+_chr1:240438061|240438210:+_chr1:240472372|240472453:+_chr1:240474128|240475183:+","UN_FMN2_LS0018","FMN2","protein coding gene","no",8.27,0,0,0.006,62,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:240093724|240123179","exon_intersect_chr1:240123179|240123345"]
["chr1:240123345|240165689:+","chr1:240116119|240116274:+_chr1:240123179|240123345:+_chr1:240165689|240165750:+_chr1:240177921|240178068:+_chr1:240188207|240188262:+_chr1:240206799|240208732:+_chr1:240211091|240211235:+_chr1:240239639|240241157:+","UN_FMN2_LS0021","FMN2","protein coding gene","no",1.52,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","TE_intersect_:240165468|chr1|240165468|240165842|L1MEg:L1:LINE|261|-","intron_intersect_chr1:240123345|240142670","intron_intersect_chr1:240154772|240170155"]
["chr1:240123345|240165693:+","chr1:240091962|240093724:+_chr1:240123179|240123345:+_chr1:240165693|240165750:+_chr1:240177921|240178068:+_chr1:240188207|240188262:+_chr1:240206799|240208732:+_chr1:240211091|240211235:+_chr1:240234251|240234450:+_chr1:240257945|240258032:+_chr1:240294822|240294883:+_chr1:240329076|240329167:+_chr1:240329339|240329468:+_chr1:240330603|240330749:+_chr1:240333887|240333946:+_chr1:240334109|240334229:+_chr1:240355816|240355908:+_chr1:240392511|240392562:+_chr1:240438061|240438210:+_chr1:240472372|240472453:+_chr1:240474128|240475183:+","UN_FMN2_LS0022","FMN2","protein coding gene","no",2.57,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","TE_intersect_:240165468|chr1|240165468|240165842|L1MEg:L1:LINE|261|-","intron_intersect_chr1:240123345|240142670","intron_intersect_chr1:240154772|240170155"]
["chr1:240165750|240177921:+","chr1:240091962|240093724:+_chr1:240123179|240123345:+_chr1:240165693|240165750:+_chr1:240177921|240178068:+_chr1:240188207|240188262:+_chr1:240206799|240208732:+_chr1:240211091|240211235:+_chr1:240234251|240234450:+_chr1:240257945|240258032:+_chr1:240294822|240294883:+_chr1:240329076|240329167:+_chr1:240329339|240329468:+_chr1:240330603|240330749:+_chr1:240333887|240333946:+_chr1:240334109|240334229:+_chr1:240355816|240355908:+_chr1:240392511|240392562:+_chr1:240438061|240438210:+_chr1:240472372|240472453:+_chr1:240474128|240475183:+","UN_FMN2_LS0024","FMN2","protein coding gene","no",2.21,0,0,0.003,27,0,0,"0(0)","TGCT","no","TE_intersect_:240165468|chr1|240165468|240165842|L1MEg:L1:LINE|261|-","NA","intron_intersect_chr1:240154772|240170155","exon_intersect_chr1:240177839|240178097"]
["chr1:240185086|240185145:-","chr1:240184883|240185029:-_chr1:240185059|240185086:-_chr1:240185145|240185175:-","UN_FMN2_LS0030","FMN2","protein coding gene","no",5.58,0,0,0.004,35,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:240180180|240188207","intron_intersect_chr1:240180180|240188207"]
["chr1:240188262|240257945:+","chr1:240091919|240093724:+_chr1:240123179|240123345:+_chr1:240177921|240178068:+_chr1:240188207|240188262:+_chr1:240257945|240258032:+_chr1:240294822|240294883:+_chr1:240329076|240329167:+_chr1:240329339|240329468:+_chr1:240330603|240330749:+_chr1:240333887|240333946:+_chr1:240334109|240334229:+_chr1:240355816|240355908:+_chr1:240392511|240392562:+_chr1:240438061|240438210:+_chr1:240472372|240472453:+_chr1:240474128|240475183:+","UN_FMN2_LS0032","FMN2","protein coding gene","no",4.49,0,0,0.002,17,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:240188262|240206799","exon_intersect_chr1:240257945|240258032"]
["chr1:240208134|240208267:-","chr1:240207386|240207639:-_chr1:240207673|240207870:-_chr1:240207970|240208134:-_chr1:240208267|240208602:-","UN_FMN2_LS0046","FMN2","protein coding gene","no",0.97,0,0,0.004,35,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:240206799|240208732","exon_intersect_chr1:240206799|240208732"]
["chr1:240211235|240239639:+","chr1:240116156|240116274:+_chr1:240123179|240123345:+_chr1:240177921|240178068:+_chr1:240188207|240188262:+_chr1:240206799|240208732:+_chr1:240211091|240211235:+_chr1:240239639|240241130:+","FMN2_LS010","FMN2","protein coding gene","no",5.2,0,0,0.012,115,0,0,"0(0)","GBM;TGCT","yes","NA","NA","intron_intersect_chr1:240211235|240235771","intron_intersect_chr1:240235895|240245260"]
["chr1:240234450|240239639:+","chr1:240091880|240093724:+_chr1:240123179|240123345:+_chr1:240165693|240165750:+_chr1:240177921|240178068:+_chr1:240188207|240188262:+_chr1:240206799|240208732:+_chr1:240211091|240211235:+_chr1:240234251|240234450:+_chr1:240239639|240241179:+","UN_FMN2_LS0054","FMN2","protein coding gene","no",1.62,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:240211235|240235771","intron_intersect_chr1:240235895|240245260"]
["chr1:2404976|2405074:-","chr1:2403964|2404188:-_chr1:2404613|2404976:-_chr1:2405074|2405834:-_chr1:2406484|2406619:-_chr1:2406720|2406895:-_chr1:2408452|2408858:-_chr1:2410371|2410451:-_chr1:2412391|2412530:-","UN_PEX10_LS0014","PEX10","protein coding gene","no",6.84,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:2403964|2405834","exon_intersect_chr1:2403964|2405834"]
["chr1:24061082|24061946:-","chr1:24056096|24057627:-_chr1:24058924|24058979:-_chr1:24061060|24061082:-_chr1:24061946|24062109:-_chr1:24063126|24063234:-_chr1:24063492|24063530:-_chr1:24064072|24064384:-","UN_MYOM3_LS0001","MYOM3","protein coding gene","no",3.59,0,0,0.015,146,0,0,"0(0)","COAD;ESCA;KIRP;READ;THYM","no","NA","NA","exon_intersect_chr1:24061946|24062109","intron_intersect_chr1:24061082|24061273"]
["chr1:240686775|240687965:-","chr1:240658112|240658419:-_chr1:240661855|240662194:-_chr1:240685686|240685753:-_chr1:240686634|240686775:-_chr1:240687965|240688014:-","UN_AL358176.3_UP_LS0011","AL358176.3","pseudogene","no",4.01,0,0,0.001,14,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:2406895|2407856:-","chr1:2406518|2406619:-_chr1:2406720|2406895:-_chr1:2407856|2407960:-_chr1:2408452|2408858:-_chr1:2410371|2410451:-_chr1:2410630|2410868:-_chr1:2412391|2412514:-","UN_PEX10_LS0053","PEX10","protein coding gene","no",2.54,0,0,0.014,137,0,0,"0(0)","SKCM;TGCT","no","NA","NA","intron_intersect_chr1:2406955|2408452","exon_intersect_chr1:2406720|2406955"]
["chr1:2407960|2408452:-","chr1:2406518|2406619:-_chr1:2406720|2406895:-_chr1:2407856|2407960:-_chr1:2408452|2408858:-_chr1:2410371|2410451:-_chr1:2410630|2410868:-_chr1:2412391|2412514:-","UN_PEX10_LS0055","PEX10","protein coding gene","no",3.51,0,0,0.015,141,0,0,"0(0)","SKCM;TGCT","no","NA","TE_intersect_:2407860|chr1|2407860|2407983|L2:L2:LINE|268|-","exon_intersect_chr1:2408452|2408858","intron_intersect_chr1:2406955|2408452"]
["chr1:2410451|2410579:-","chr1:2408755|2408858:-_chr1:2410371|2410451:-_chr1:2410579|2410836:-","UN_PEX10_LS0061","PEX10","protein coding gene","no",1.88,0,0,0.006,58,0.001,1,"0(0)","PRAD","no","NA","NA","intron_intersect_chr1:2410451|2410630","intron_intersect_chr1:2410451|2410630"]
["chr1:241357482|241357823:+","chr1:241357388|241357482:+_chr1:241357823|241357942:+_chr1:241360456|241360613:+_chr1:241361558|241361606:+","UN_AL359764.1_UP_LS0001","AL359764.1","lncRNA gene","no",4.1,0,0,0.016,158,0,0,"0(0)","GBM;PCPG;UCS","no","NA","NA","NA","NA"]
["chr1:241357482|241360456:+","chr1:241357389|241357482:+_chr1:241360456|241360613:+_chr1:241361558|241361594:+","UN_AL359764.1_UP_LS0002","AL359764.1","lncRNA gene","no",2.64,0,0,0.005,46,0,0,"0(0)","GBM;UCS","no","NA","TE_intersect_:241360086|chr1|241360086|241360672|MLT2E:ERVL:LTR|292|+","NA","NA"]
["chr1:241357942|241360456:+","chr1:241357388|241357482:+_chr1:241357823|241357942:+_chr1:241360456|241360613:+_chr1:241361558|241361606:+","UN_AL359764.1_UP_LS0003","AL359764.1","lncRNA gene","no",5.39,0,0,0.016,157,0,0,"0(0)","DLBC;GBM;PAAD;PCPG;UCS","no","NA","TE_intersect_:241360086|chr1|241360086|241360672|MLT2E:ERVL:LTR|292|+","NA","NA"]
["chr1:241360613|241361558:+","chr1:241357388|241357482:+_chr1:241357823|241357942:+_chr1:241360456|241360613:+_chr1:241361558|241361606:+","UN_AL359764.1_UP_LS0004","AL359764.1","lncRNA gene","no",3.36,0,0,0.016,153,0,0,"0(0)","DLBC;GBM;LGG;PCPG;UCS","no","TE_intersect_:241360086|chr1|241360086|241360672|MLT2E:ERVL:LTR|292|+","NA","NA","NA"]
["chr1:241413836|241420508:+","chr1:241413655|241413836:+_chr1:241420508|241420632:+","UN_AL359764.1_UP_LS0007","AL359764.1","lncRNA gene","no",2.83,0,0,0.001,13,0,0,"0(0)","KICH","no","NA","TE_intersect_:241420474|chr1|241420474|241420783|AluSz:Alu:SINE|107|-","NA","NA"]
["chr1:241425101|241433169:+","chr1:241424398|241425101:+_chr1:241433169|241433492:+","UN_AL359764.1_LS0007","AL359764.1","lncRNA gene","no",3.32,0,0,0.017,159,0,0,"0(0)","GBM;LGG;PCPG","no","TE_intersect_:241424985|chr1|241424985|241431394|L1PA7:L1:LINE|103|-","TE_intersect_:241433041|chr1|241433041|241433568|MER34:ERV1:LTR|162|+","intron_intersect_chr1:241424714|241433172","intron_intersect_chr1:241424714|241433172"]
["chr1:24143385|24143747:-","chr1:24119771|24121737:-_chr1:24123302|24123423:-_chr1:24128141|24128279:-_chr1:24134211|24134386:-_chr1:24137131|24137309:-_chr1:24138582|24138714:-_chr1:24143040|24143385:-_chr1:24143747|24144006:-","UN_IL22RA1_UP_LS0001","IL22RA1","protein coding gene","no",3.58,0,0,0.002,18,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:24157729|24163600:+","chr1:24157605|24157729:+_chr1:24163600|24167184:+","UN_IFNLR1_LS0010","IFNLR1","protein coding gene","no",1.02,0,0,0.003,33,0,0,"0(0)","OV","no","NA","TE_intersect_:24163571|chr1|24163571|24163864|AluSp:Alu:SINE|85|-","exon_intersect_chr1:24154157|24157891","intron_intersect_chr1:24161684|24169417"]
["chr1:241604579|241677303:-","chr1:241593602|241594691:-_chr1:241597746|241597997:-_chr1:241604260|241604579:-_chr1:241677303|241677376:-","UN_OPN3_LS0019","OPN3","protein coding gene","no",1.88,0,0,0.002,18,0,0,"0(0)","ACC","no","NA","NA","exon_intersect_chr1:241677303|241677376","intron_intersect_chr1:241604579|241614043"]
["chr1:241922211|241944622:-","chr1:241921959|241922211:-_chr1:241944622|241945222:-","UN_OPN3_UP_LS0006","OPN3","protein coding gene","no",2.64,0,0,0.017,162,0,0,"0(0)","OV;STAD","no","NA","TE_intersect_:241922064|chr1|241922064|241922231|AluSq:Alu:SINE|102|+","NA","NA"]
["chr1:241945071|241963010:+","chr1:241945040|241945071:+_chr1:241963010|241963334:+","UN_CFL1P4_UP_LS0002","CFL1P4","pseudogene","no",2.25,0,0,0.005,50,0,0,"0(0)","OV","no","TE_intersect_:241945055|chr1|241945055|241945178|LTR47A:ERVL:LTR|162|+","TE_intersect_:241962988|chr1|241962988|241963276|AluSq2:Alu:SINE|101|-","NA","NA"]
["chr1:24202599|24211388:+","chr1:24200229|24200391:+_chr1:24202464|24202599:+_chr1:24211388|24211690:+","UN_AL590683.1_LS0002","AL590683.1","lncRNA gene","no",3.61,0.07,0,0.003,30,0.001,1,"0(0)","DLBC","no","NA","TE_intersect_:24211275|chr1|24211275|24211470|MIR:MIR:SINE|249|-","intron_intersect_chr1:24202599|24210133","exon_intersect_chr1:24210133|24211693"]
["chr1:24202599|24220918:+","chr1:24202191|24202366:+_chr1:24202464|24202599:+_chr1:24220918|24221312:+","UN_GRHL3_UP_LS0002","GRHL3","protein coding gene","no",4.42,0,0,0.002,19,0,0,"0(0)","DLBC","no","NA","TE_intersect_:24220918|chr1|24220918|24221333|MLT1H1:ERVL-MaLR:LTR|249|+","intron_intersect_chr1:24202599|24210133","NA"]
["chr1:242147554|242184853:+","chr1:242147207|242147554:+_chr1:242184853|242185013:+_chr1:242185837|242185964:+_chr1:242192155|242192304:+_chr1:242209218|242209335:+_chr1:242210369|242210832:+","UN_PLD5_LS0005","PLD5","protein coding gene","no",2.19,0,0,0.003,26,0,0,"0(0)","GBM","no","TE_intersect_:242147016|chr1|242147016|242149664|L1ME1:L1:LINE|235|-","NA","intron_intersect_chr1:242147554|242177729","intron_intersect_chr1:242178365|242188647"]
["chr1:242147554|242185837:+","chr1:242147107|242147554:+_chr1:242185837|242185964:+_chr1:242192155|242192304:+_chr1:242209092|242209335:+_chr1:242210369|242210829:+","UN_PLD5_LS0006","PLD5","protein coding gene","no",2.3,0.04,0,0.002,23,0.001,1,"0(0)","GBM","no","TE_intersect_:242147016|chr1|242147016|242149664|L1ME1:L1:LINE|235|-","NA","intron_intersect_chr1:242147554|242177729","intron_intersect_chr1:242178365|242188647"]
["chr1:242161974|242177729:+","chr1:242147249|242147554:+_chr1:242161729|242161974:+_chr1:242177729|242177903:+_chr1:242178295|242178365:+_chr1:242184853|242185013:+_chr1:242185837|242185964:+_chr1:242192155|242192304:+_chr1:242209218|242209335:+_chr1:242210369|242210806:+","UN_PLD5_LS0011","PLD5","protein coding gene","no",2.18,0,0,0.009,89,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:242147554|242177729","exon_intersect_chr1:242177729|242177903"]
["chr1:242161974|242178295:+","chr1:242147268|242147554:+_chr1:242161729|242161974:+_chr1:242178295|242178365:+_chr1:242185837|242185964:+_chr1:242192155|242192304:+_chr1:242209218|242209335:+_chr1:242210369|242210832:+","UN_PLD5_LS0012","PLD5","protein coding gene","no",2.31,0,0,0.008,75,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:242147554|242177729","exon_intersect_chr1:242178295|242178365"]
["chr1:242185013|242185837:+","chr1:242147249|242147554:+_chr1:242161729|242161974:+_chr1:242177729|242177903:+_chr1:242178295|242178365:+_chr1:242184853|242185013:+_chr1:242185837|242185964:+_chr1:242192155|242192304:+_chr1:242209218|242209335:+_chr1:242210369|242210806:+","UN_PLD5_LS0020","PLD5","protein coding gene","no",4.53,0,0,0.011,104,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:242178365|242188647","intron_intersect_chr1:242178365|242188647"]
["chr1:24236837|24239529:+","chr1:24236394|24236837:+_chr1:24239529|24240103:+","UN_GRHL3_UP_LS0004","GRHL3","protein coding gene","no",2.5,0,0,0.012,115,0,0,"0(0)","BLCA;HNSC;LUSC","no","TE_intersect_:24236649|chr1|24236649|24236881|MIR:MIR:SINE|300|-","TE_intersect_:24239524|chr1|24239524|24239649|Charlie24:hAT-Charlie:DNA|275|-","NA","NA"]
["chr1:242522417|242524088:-","chr1:242521064|242521318:-_chr1:242522287|242522417:-_chr1:242524088|242524518:-","UN_PLD5_LS0045","PLD5","protein coding gene","no",3.25,0,0,0.004,42,0,0,"0(0)","ACC","no","NA","NA","exon_intersect_chr1:242524088|242524696","intron_intersect_chr1:242449482|242524088"]
["chr1:243072279|243078988:-","chr1:243072253|243072279:-_chr1:243078988|243079052:-_chr1:243081890|243082125:-_chr1:243087710|243088132:-","UN_LINC01347_LS0028","LINC01347","pseudogene","no",1.7,0,0,0.002,19,0,0,"0(0)","ESCA","no","NA","TE_intersect_:243071998|chr1|243071998|243072300|AluJr:Alu:SINE|182|+","exon_intersect_chr1:243078988|243079052","intron_intersect_chr1:243069704|243078988"]
["chr1:243140107|243140463:-","chr1:243125164|243126738:-_chr1:243128249|243128300:-_chr1:243129360|243129453:-_chr1:243136143|243136231:-_chr1:243139937|243140107:-_chr1:243140463|243142463:-_chr1:243156221|243156455:-_chr1:243164284|243166116:-_chr1:243169628|243169754:-_chr1:243172697|243172846:-_chr1:243185779|243186409:-","UN_CEP170_LS0005","CEP170","protein coding gene","no",7.55,0,0,0.004,34,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:243139953|243140588","exon_intersect_chr1:243139937|243140363"]
["chr1:24318908|24331426:+","chr1:24318272|24318908:+_chr1:24331426|24331612:+_chr1:24334645|24334706:+_chr1:24336482|24336827:+_chr1:24337078|24337151:+_chr1:24337636|24337789:+_chr1:24337992|24338103:+_chr1:24339668|24339762:+_chr1:24342115|24342273:+_chr1:24342694|24342772:+_chr1:24342892|24343025:+_chr1:24344897|24344931:+_chr1:24346553|24346641:+_chr1:24347468|24347553:+_chr1:24350058|24350122:+_chr1:24354374|24355311:+","UN_NIPAL3_UP_LS0002","NIPAL3","protein coding gene","no",3.4,0,0,0.023,223,0,0,"0(0)","GBM;LGG","no","TE_intersect_:24318741|chr1|24318741|24318936|MIRc:MIR:SINE|236|+","NA","intron_intersect_chr1:24311992|24319322","exon_intersect_chr1:24331426|24331612"]
["chr1:24319568|24334645:+","chr1:24319418|24319568:+_chr1:24334645|24334706:+_chr1:24336482|24336827:+_chr1:24337078|24337151:+_chr1:24337636|24337789:+_chr1:24337992|24338103:+_chr1:24339668|24339762:+_chr1:24342115|24342273:+_chr1:24342694|24342772:+_chr1:24342892|24343025:+_chr1:24344897|24344931:+_chr1:24346553|24346641:+_chr1:24347468|24347553:+_chr1:24350058|24350122:+_chr1:24354374|24355295:+","UN_GRHL3_LS0002","GRHL3","protein coding gene","no",2.49,0,0,0.013,120,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr1:24319322|24319747","exon_intersect_chr1:24334645|24334706"]
["chr1:243316842|243330540:+","chr1:243293118|243293219:+_chr1:243304713|243304777:+_chr1:243305012|243305288:+_chr1:243307787|243307883:+_chr1:243307989|243308177:+_chr1:243316755|243316842:+_chr1:243330540|243330692:+_chr1:243341039|243341173:+_chr1:243344215|243344331:+_chr1:243378721|243378863:+_chr1:243415702|243415829:+_chr1:243417968|243418076:+_chr1:243426427|243426558:+_chr1:243489014|243489140:+_chr1:243499756|243500089:+","UN_SDCCAG8_LS0036","SDCCAG8","protein coding gene","no",4.41,0,0,0.005,44,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr1:243316755|243316895","exon_intersect_chr1:243330540|243330692"]
["chr1:243364301|243378721:+","chr1:243364152|243364301:+_chr1:243378721|243378863:+_chr1:243415702|243415829:+_chr1:243417968|243418076:+_chr1:243426427|243426558:+_chr1:243489014|243489140:+_chr1:243499756|243500089:+","UN_SDCCAG8_LS0052","SDCCAG8","protein coding gene","no",6.15,0,0,0.001,12,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr1:243346255|243378721","exon_intersect_chr1:243378721|243378863"]
["chr1:243378863|243379895:+","chr1:243256056|243256240:+_chr1:243270105|243270257:+_chr1:243270978|243271063:+_chr1:243274543|243274656:+_chr1:243286272|243286397:+_chr1:243293091|243293219:+_chr1:243293399|243293494:+_chr1:243304713|243304777:+_chr1:243307989|243308177:+_chr1:243316755|243316893:+_chr1:243317346|243317654:+_chr1:243330540|243330692:+_chr1:243341039|243341173:+_chr1:243344215|243344331:+_chr1:243378721|243378863:+_chr1:243379895|243379974:+_chr1:243415702|243415829:+","UN_SDCCAG8_LS0055","SDCCAG8","protein coding gene","no",0.78,0,0,0.002,17,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr1:243378863|243415702","intron_intersect_chr1:243378863|243415702"]
["chr1:243379974|243415702:+","chr1:243256056|243256240:+_chr1:243270105|243270257:+_chr1:243270978|243271063:+_chr1:243274543|243274656:+_chr1:243286272|243286397:+_chr1:243293091|243293219:+_chr1:243293399|243293494:+_chr1:243304713|243304777:+_chr1:243307989|243308177:+_chr1:243316755|243316893:+_chr1:243317346|243317654:+_chr1:243330540|243330692:+_chr1:243341039|243341173:+_chr1:243344215|243344331:+_chr1:243378721|243378863:+_chr1:243379895|243379974:+_chr1:243415702|243415829:+","UN_SDCCAG8_LS0057","SDCCAG8","protein coding gene","no",1.57,0,0,0.002,18,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr1:243378863|243415702","exon_intersect_chr1:243415702|243415829"]
["chr1:243421485|243426427:+","chr1:243421391|243421485:+_chr1:243426427|243426558:+_chr1:243489014|243489140:+_chr1:243499756|243500089:+","UN_SDCCAG8_LS0065","SDCCAG8","protein coding gene","no",1.4,0,0,0.006,54,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr1:243418076|243426427","exon_intersect_chr1:243426427|243426558"]
["chr1:243473762|243474227:+","chr1:243471874|243472051:+_chr1:243473642|243473762:+_chr1:243474227|243474411:+_chr1:243475931|243476364:+","UN_SDCCAG8_LS0084","SDCCAG8","protein coding gene","no",3.04,0.06,0,0.025,239,0.001,1,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:243426558|243475931","intron_intersect_chr1:243426558|243475931"]
["chr1:243477918|243484090:-","chr1:243477052|243477918:-_chr1:243484090|243484282:-","UN_SDCCAG8_LS0092","SDCCAG8","protein coding gene","no",2.24,0,0,0.003,31,0,0,"0(0)","LIHC","no","NA","TE_intersect_:243477848|chr1|243477848|243477959|MER5C1:hAT-Charlie:DNA|261|+","intron_intersect_chr1:243476364|243487815","intron_intersect_chr1:243476364|243487815"]
["chr1:243606414|243607913:+","chr1:243605968|243606414:+_chr1:243607913|243608006:+_chr1:243623435|243624019:+","UN_AKT3_LS0015","AKT3","protein coding gene","no",3.49,0,0,0.002,15,0,0,"0(0)","MESO","no","TE_intersect_:243606170|chr1|243606170|243607731|THE1C-int:ERVL-MaLR:LTR|116|+","TE_intersect_:243607731|chr1|243607731|243608084|THE1C:ERVL-MaLR:LTR|111|+","intron_intersect_chr1:243573048|243612483","intron_intersect_chr1:243573048|243612483"]
["chr1:243608006|243623435:+","chr1:243605968|243606414:+_chr1:243607913|243608006:+_chr1:243623435|243624019:+","UN_AKT3_LS0016","AKT3","protein coding gene","no",9.86,0,0,0.002,20,0,0,"0(0)","MESO","no","TE_intersect_:243607731|chr1|243607731|243608084|THE1C:ERVL-MaLR:LTR|111|+","TE_intersect_:243623355|chr1|243623355|243623886|MLT2B3:ERVL:LTR|202|+","intron_intersect_chr1:243573048|243612483","intron_intersect_chr1:243615161|243624666"]
["chr1:243917526|243952298:+","chr1:243917286|243917526:+_chr1:243952298|243954453:+","UN_AL591885.1_LS0001","AL591885.1","lncRNA gene","no",1.18,0,0,0.008,72,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:243917526|243978410","intron_intersect_chr1:243917526|243978410"]
["chr1:244336861|244342909:+","chr1:244336663|244336861:+_chr1:244342909|244343144:+","UN_C1orf100_UP_LS0009","C1orf100","protein coding gene","no",3.62,0,0,0.009,89,0,0,"0(0)","LUAD;TGCT","no","NA","NA","NA","NA"]
["chr1:244454596|244457493:+","chr1:244454470|244454596:+_chr1:244457493|244457569:+_chr1:244459948|244460577:+","UN_CATSPERE_LS0001","CATSPERE","protein coding gene","no",1.01,0,0,0.001,14,0,0,"0(0)","TGCT","no","TE_intersect_:244453501|chr1|244453501|244459080|HUERS-P1-int:ERV1:LTR|70|+","TE_intersect_:244453501|chr1|244453501|244459080|HUERS-P1-int:ERV1:LTR|70|+","exon_intersect_chr1:244454377|244454613","exon_intersect_chr1:244457493|244457569"]
["chr1:244457569|244459945:+","chr1:244454341|244454613:+_chr1:244457493|244457569:+_chr1:244459945|244460532:+","UN_CATSPERE_LS0004","CATSPERE","protein coding gene","no",2.03,0,0,0.012,118,0,0,"0(0)","OV;TGCT","no","TE_intersect_:244453501|chr1|244453501|244459080|HUERS-P1-int:ERV1:LTR|70|+","TE_intersect_:244459376|chr1|244459376|244459994|HUERS-P1-int:ERV1:LTR|70|+","intron_intersect_chr1:244457569|244461371","intron_intersect_chr1:244457569|244461371"]
["chr1:244457569|244459948:+","chr1:244454474|244454613:+_chr1:244457493|244457569:+_chr1:244459948|244461343:+","UN_CATSPERE_LS0005","CATSPERE","protein coding gene","no",2.19,0,0,0.009,85,0,0,"0(0)","OV;TGCT","no","TE_intersect_:244453501|chr1|244453501|244459080|HUERS-P1-int:ERV1:LTR|70|+","TE_intersect_:244459376|chr1|244459376|244459994|HUERS-P1-int:ERV1:LTR|70|+","intron_intersect_chr1:244457569|244461371","intron_intersect_chr1:244457569|244461371"]
["chr1:244457569|244477541:+","chr1:244457490|244457569:+_chr1:244477541|244477614:+_chr1:244477906|244477975:+_chr1:244479717|244482392:+","UN_CATSPERE_LS0007","CATSPERE","protein coding gene","no",2.12,0,0,0.006,62,0.001,1,"0(0)","OV","no","TE_intersect_:244453501|chr1|244453501|244459080|HUERS-P1-int:ERV1:LTR|70|+","NA","intron_intersect_chr1:244457569|244461371","exon_intersect_chr1:244477541|244477614"]
["chr1:244598190|244604873:-","chr1:244597701|244598190:-_chr1:244604873|244605199:-","UN_CATSPERE_LS0022","CATSPERE","protein coding gene","no",6.33,0,0,0.002,21,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:244598687|244605695","intron_intersect_chr1:244593578|244598391"]
["chr1:244598190|244615854:-","chr1:244598060|244598190:-_chr1:244615854|244615926:-","UN_CATSPERE_LS0023","CATSPERE","protein coding gene","no",1.79,0,0,0.003,28,0,0,"0(0)","OV","no","TE_intersect_:244615831|chr1|244615831|244616149|AluJo:Alu:SINE|176|+","NA","intron_intersect_chr1:244610588|244617529","intron_intersect_chr1:244593578|244598391"]
["chr1:244615948|244651437:-","chr1:244615638|244615948:-_chr1:244651437|244652153:-","UN_CYCSP5_UP_LS0001","CYCSP5","pseudogene","no",1.34,0,0,0.005,47,0,0,"0(0)","OV","no","TE_intersect_:244651378|chr1|244651378|244651808|MLT1H2:ERVL-MaLR:LTR|244|-","TE_intersect_:244615831|chr1|244615831|244616149|AluJo:Alu:SINE|176|+","NA","intron_intersect_chr1:244610588|244617529"]
["chr1:24465327|24468986:+","chr1:24415814|24415904:+_chr1:24419291|24419640:+_chr1:24433104|24433213:+_chr1:24440172|24440240:+_chr1:24442055|24442226:+_chr1:24445189|24445244:+_chr1:24449481|24449626:+_chr1:24453408|24453504:+_chr1:24456138|24456273:+_chr1:24458888|24458976:+_chr1:24460481|24460544:+_chr1:24464026|24464120:+_chr1:24465296|24465327:+_chr1:24468986|24472976:+","UN_NIPAL3_LS0037","NIPAL3","protein coding gene","no",1.6,0,0,0.003,24,0,0,"0(0)","PCPG","no","TE_intersect_:24464799|chr1|24464799|24465338|Tigger15a:TcMar-Tigger:DNA|249|-","NA","exon_intersect_chr1:24464026|24466378","exon_intersect_chr1:24468986|24472976"]
["chr1:244660620|244666811:-","chr1:244658924|244660620:-_chr1:244666811|244666883:-","UN_DESI2_LS0012","DESI2","protein coding gene","no",23.41,0,0,0.002,16,0,0,"0(0)","UVM","no","TE_intersect_:244666745|chr1|244666745|244667089|THE1A:ERVL-MaLR:LTR|90|-","NA","intron_intersect_chr1:244656521|244686597","intron_intersect_chr1:244656521|244686597"]
["chr1:244769168|244771365:+","chr1:244769099|244769168:+_chr1:244771365|244771634:+","UN_COX20_UP_LS0008","COX20","protein coding gene","no",2.88,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:244766489|chr1|244766489|244769209|L1M1:L1:LINE|129|-","NA","NA","NA"]
["chr1:244816318|244829684:+","chr1:244815758|244816318:+_chr1:244829684|244829741:+_chr1:244834792|244835756:+_chr1:244841944|244842058:+_chr1:244842195|244842258:+_chr1:244843041|244843252:+","UN_COX20_UP_LS0011","COX20","protein coding gene","no",2.37,0,0,0.002,15,0,0,"0(0)","LAML","no","TE_intersect_:244816231|chr1|244816231|244816434|MER41-int:ERV1:LTR|79|+","NA","NA","NA"]
["chr1:244897795|244897924:+","chr1:244894069|244894335:+_chr1:244897672|244897795:+_chr1:244897924|244898820:+","UN_RN7SKP55_UP_LS0005","RN7SKP55","small non-coding RNA gene","no",3.09,0,0,0.002,21,0,0,"0(0)","DLBC","no","TE_intersect_:244897462|chr1|244897462|244897985|HAL1:L1:LINE|288|-","TE_intersect_:244897462|chr1|244897462|244897985|HAL1:L1:LINE|288|-","NA","NA"]
["chr1:244957853|244957973:+","chr1:244957746|244957853:+_chr1:244957973|244958366:+","UN_EFCAB2_UP_LS0001","EFCAB2","protein coding gene","no",3.59,0,0,0.003,30,0,0,"0(0)","DLBC","no","TE_intersect_:244957552|chr1|244957552|244957935|MSTA:ERVL-MaLR:LTR|134|+","TE_intersect_:244957951|chr1|244957951|244958092|FRAM:Alu:SINE|206|-","NA","NA"]
["chr1:245051797|245059386:+","chr1:245051546|245051797:+_chr1:245059386|245059458:+_chr1:245082083|245082162:+_chr1:245083442|245083484:+_chr1:245083622|245083688:+_chr1:245121920|245122991:+","UN_EFCAB2_LS0023","EFCAB2","protein coding gene","no",3.18,0,0,0.007,69,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:245044032|245059386","exon_intersect_chr1:245059386|245059458"]
["chr1:245083688|245124705:+","chr1:244970390|244970443:+_chr1:245017242|245017326:+_chr1:245059386|245059458:+_chr1:245082083|245082162:+_chr1:245083442|245083484:+_chr1:245083622|245083688:+_chr1:245124705|245126943:+","EFCAB2_LS024","EFCAB2","protein coding gene","no",2.01,0,0,0.001,13,0,0,"0(0)","UVM","yes","NA","TE_intersect_:245124453|chr1|245124453|245125028|LTR26E:ERV1:LTR|151|+","exon_intersect_chr1:245083622|245083860","exon_intersect_chr1:245121920|245127164"]
["chr1:245103172|245103261:+","chr1:245083456|245083484:+_chr1:245083622|245083688:+_chr1:245087245|245103172:+_chr1:245103261|245106477:+","UN_EFCAB2_LS0044","EFCAB2","protein coding gene","no",1.99,0,0,0.002,21,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:245091806|245107179","intron_intersect_chr1:245091806|245107179"]
["chr1:245106061|245107873:-","chr1:245104451|245106061:-_chr1:245107873|245108533:-","UN_EFCAB2_LS0048","EFCAB2","protein coding gene","no",2.22,0,0,0.004,38,0,0,"0(0)","LUAD","no","NA","TE_intersect_:245105794|chr1|245105794|245106079|AluJr:Alu:SINE|151|+","intron_intersect_chr1:245107297|245121920","intron_intersect_chr1:245091806|245107179"]
["chr1:245309608|245311150:-","chr1:245305940|245309608:-_chr1:245311150|245311589:-","UN_KIF26B_LS0031","KIF26B","protein coding gene","no",3.72,0,0,0.002,16,0,0,"0(0)","LAML","no","NA","TE_intersect_:245309216|chr1|245309216|245309649|MLT2B4:ERVL:LTR|213|+","intron_intersect_chr1:245283089|245353678","intron_intersect_chr1:245283089|245353678"]
["chr1:245512856|245513246:-","chr1:245512608|245512856:-_chr1:245513246|245513317:-","UN_KIF26B_LS0048","KIF26B","protein coding gene","no",2.63,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:245511128|245540767","intron_intersect_chr1:245511128|245540767"]
["chr1:245578493|245580759:-","chr1:245573948|245578493:-_chr1:245580759|245582257:-_chr1:245583101|245584430:-","UN_KIF26B_LS0051","KIF26B","protein coding gene","no",3.19,0,0,0.005,48,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:245540950|245602577","intron_intersect_chr1:245540950|245602577"]
["chr1:245582257|245583101:-","chr1:245573948|245578493:-_chr1:245580759|245582257:-_chr1:245583101|245584430:-","UN_KIF26B_LS0055","KIF26B","protein coding gene","no",1.53,0,0,0.003,29,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr1:245540950|245602577","intron_intersect_chr1:245540950|245602577"]
["chr1:245602783|245611793:+","chr1:245154985|245155487:+_chr1:245155750|245155864:+_chr1:245156282|245156683:+_chr1:245366834|245367367:+_chr1:245419579|245419745:+_chr1:245540767|245540950:+_chr1:245602577|245602783:+_chr1:245611793|245611976:+_chr1:245646121|245646280:+_chr1:245684233|245684395:+_chr1:245685405|245688807:+_chr1:245698106|245698308:+_chr1:245698887|245699037:+_chr1:245702440|245709432:+","UN_KIF26B_LS0058","KIF26B","protein coding gene","no",0.85,0,0,0.004,41,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr1:245602783|245607651","exon_intersect_chr1:245611793|245611976"]
["chr1:245708599|245708663:-","chr1:245708117|245708599:-_chr1:245708663|245708804:-","UN_KIF26B_LS0082","KIF26B","protein coding gene","no",4.12,0,0,0.007,67,0,0,"0(0)","GBM","no","TE_intersect_:245708649|chr1|245708649|245708812|MIR3:MIR:SINE|282|+","TE_intersect_:245708586|chr1|245708586|245708624|MIR3:MIR:SINE|184|+","exon_intersect_chr1:245702458|245709431","exon_intersect_chr1:245702458|245709431"]
["chr1:245749664|245756429:-","chr1:245749367|245749664:-_chr1:245756429|245757206:-","UN_SMYD3_LS0001","SMYD3","protein coding gene","no",4.12,0,0,0.001,13,0,0,"0(0)","DLBC","no","TE_intersect_:245755217|chr1|245755217|245756956|L1MDa:L1:LINE|206|-","NA","intron_intersect_chr1:245749664|245764041","intron_intersect_chr1:245749664|245764041"]
["chr1:245764149|245857133:-","chr1:245749342|245749664:-_chr1:245764041|245764149:-_chr1:245857133|245857327:-","UN_SMYD3_LS0013","SMYD3","protein coding gene","no",7.54,0,0,0.004,43,0,0,"0(0)","CHOL;LIHC","no","NA","NA","intron_intersect_chr1:245814415|245858496","intron_intersect_chr1:245764149|245788861"]
["chr1:245789133|245789954:+","chr1:245789008|245789133:+_chr1:245789954|245790092:+_chr1:245791515|245791555:+_chr1:245799686|245800433:+","UN_SMYD3_LS0021","SMYD3","protein coding gene","no",2.4,0,0,0.003,27,0,0,"0(0)","OV","no","NA","TE_intersect_:245789932|chr1|245789932|245790256|L2b:L2:LINE|332|-","intron_intersect_chr1:245788942|245814342","intron_intersect_chr1:245788942|245814342"]
["chr1:245790092|245791515:+","chr1:245789008|245789133:+_chr1:245789954|245790092:+_chr1:245791515|245791555:+_chr1:245799686|245800433:+","UN_SMYD3_LS0022","SMYD3","protein coding gene","no",2.93,0,0,0.003,30,0,0,"0(0)","OV","no","TE_intersect_:245789932|chr1|245789932|245790256|L2b:L2:LINE|332|-","NA","intron_intersect_chr1:245788942|245814342","intron_intersect_chr1:245788942|245814342"]
["chr1:245791555|245799686:+","chr1:245789008|245789133:+_chr1:245789954|245790092:+_chr1:245791515|245791555:+_chr1:245799686|245800433:+","UN_SMYD3_LS0025","SMYD3","protein coding gene","no",3.21,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr1:245788942|245814342","intron_intersect_chr1:245788942|245814342"]
["chr1:245863886|245874966:-","chr1:245749318|245749664:-_chr1:245764041|245764149:-_chr1:245858496|245858670:-_chr1:245863799|245863886:-_chr1:245874966|245875072:-","UN_SMYD3_LS0042","SMYD3","protein coding gene","no",4.7,0,0,0.008,78,0,0,"0(0)","CHOL;KICH;LIHC","no","NA","NA","intron_intersect_chr1:245863886|245915530","intron_intersect_chr1:245863886|245915530"]
["chr1:245898934|245899955:+","chr1:245898779|245898934:+_chr1:245899955|245900047:+_chr1:245901515|245908071:+","UN_SMYD3_LS0045","SMYD3","protein coding gene","no",1.72,0,0,0.002,21,0,0,"0(0)","LIHC","no","NA","TE_intersect_:245899624|chr1|245899624|245900121|MLT2B4:ERVL:LTR|188|+","intron_intersect_chr1:245863886|245915530","intron_intersect_chr1:245863886|245915530"]
["chr1:245915640|245917688:-","chr1:245863809|245863886:-_chr1:245915530|245915640:-_chr1:245917688|245917860:-","UN_SMYD3_LS0049","SMYD3","protein coding gene","no",6.53,0,0,0.002,23,0,0,"0(0)","THYM","no","TE_intersect_:245917435|chr1|245917435|245917757|L2a:L2:LINE|282|+","NA","intron_intersect_chr1:245915640|245927931","intron_intersect_chr1:245915640|245927931"]
["chr1:245929937|245937511:-","chr1:245863809|245863886:-_chr1:245915530|245915640:-_chr1:245927931|245928033:-_chr1:245929870|245929937:-_chr1:245937511|245938080:-","UN_SMYD3_LS0057","SMYD3","protein coding gene","no",5.73,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr1:245930823|245953231","exon_intersect_chr1:245929870|245930823"]
["chr1:245929937|246106424:-","chr1:245863809|245863886:-_chr1:245915530|245915640:-_chr1:245927931|245928033:-_chr1:245929870|245929937:-_chr1:246106424|246109850:-","UN_SMYD3_LS0066","SMYD3","protein coding gene","no",18.18,0,0,0.005,45,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:246096423|246108626","exon_intersect_chr1:245929870|245930823"]
["chr1:24655129|24655652:+","chr1:24655054|24655129:+_chr1:24655652|24655838:+_chr1:24660719|24660799:+_chr1:24661313|24661396:+_chr1:24662660|24662804:+_chr1:24666815|24666925:+_chr1:24669123|24669587:+_chr1:24670120|24670315:+_chr1:24671386|24671595:+","UN_SRRM1_LS0027","SRRM1","protein coding gene","no",0.67,0,0,0.004,42,0.003,2,"0(0)","CHOL","no","NA","NA","intron_intersect_chr1:24655129|24660719","intron_intersect_chr1:24655129|24660719"]
["chr1:247218866|247222150:+","chr1:247218510|247218609:+_chr1:247218780|247218866:+_chr1:247222150|247222242:+_chr1:247222792|247223014:+","UN_AL390728.5_LS0007","AL390728.5","lncRNA gene","no",8.95,0,0,0.006,57,0,0,"0(0)","OV;TGCT","no","TE_intersect_:247218631|chr1|247218631|247219907|HERVP71A-int:ERV1:LTR|75|+","TE_intersect_:247221918|chr1|247221918|247222254|AluSz:Alu:SINE|116|-","intron_intersect_chr1:247212392|247229940","intron_intersect_chr1:247212392|247229940"]
["chr1:248847604|248847725:-","chr1:248847470|248847604:-_chr1:248847725|248847871:-","UN_ZNF672_LS0013","ZNF672","protein coding gene","no",1.08,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:248847052|248849517","exon_intersect_chr1:248847052|248849517"]
["chr1:2586948|2587741:+","chr1:2586794|2586948:+_chr1:2587741|2587792:+_chr1:2588390|2588453:+_chr1:2588550|2588625:+_chr1:2588922|2589040:+_chr1:2589410|2591470:+","UN_PRXL2B_LS0005","PRXL2B","protein coding gene","no",2.36,0,0,0.005,51,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr1:2586948|2587042","exon_intersect_chr1:2587741|2587792"]
["chr1:26877775|26878575:-","chr1:26876132|26877775:-_chr1:26878575|26879749:-_chr1:26884160|26884290:-_chr1:26885973|26886133:-_chr1:26888969|26889125:-_chr1:26889686|26890308:-","UN_GPN2_LS0005","GPN2","protein coding gene","no",1.54,0,0,0.003,27,0,0,"0(0)","STAD","no","TE_intersect_:26878292|chr1|26878292|26878580|AluSx:Alu:SINE|101|-","TE_intersect_:26877753|chr1|26877753|26878043|AluSg7:Alu:SINE|79|+","exon_intersect_chr1:26876133|26879749","exon_intersect_chr1:26876133|26879749"]
["chr1:27058285|27058398:+","chr1:27058010|27058285:+_chr1:27058398|27058522:+_chr1:27060014|27065024:+","UN_AL590640.2_UP_LS0031","AL590640.2","pseudogene","no",0.96,0,0,0.002,17,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr1:28497707|28498013:-","chr1:28402573|28402585:-_chr1:28497690|28497707:-_chr1:28498013|28498191:-","UN_PHACTR4_LS0107","PHACTR4","protein coding gene","yes",7.64,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:28496534|28500369","exon_intersect_chr1:28496534|28500369"]
["chr1:30870548|30870578:+","chr1:30870196|30870267:+_chr1:30870350|30870548:+_chr1:30870578|30870807:+","UN_SDC3_LS0071","SDC3","protein coding gene","no",7.16,0.18,0,0.003,31,0.001,1,"0(0)","GBM","no","NA","NA","exon_intersect_chr1:30869467|30873377","exon_intersect_chr1:30869467|30873377"]
["chr1:31528485|31534218:+","chr1:31518435|31518836:+_chr1:31520946|31521063:+_chr1:31522025|31522236:+_chr1:31528430|31528485:+_chr1:31534218|31536409:+","UN_LINC01226_LS0020","LINC01226","lncRNA gene","no",3.61,0,0,0.004,37,0,0,"0(0)","THYM","no","NA","TE_intersect_:31534214|chr1|31534214|31534446|ERV24B_Prim-int:ERV1:LTR|336|-","intron_intersect_chr1:31524245|31536269","intron_intersect_chr1:31524245|31536269"]
["chr1:32175524|32175838:-","chr1:32175314|32175524:-_chr1:32175838|32175940:-","UN_KPNA6_LS0070","KPNA6","protein coding gene","no",2.48,0,0,0.006,57,0,0,"0(0)","OV;STAD","no","TE_intersect_:32175816|chr1|32175816|32176106|AluSx1:Alu:SINE|124|+","TE_intersect_:32175502|chr1|32175502|32175804|AluSx3:Alu:SINE|76|+","exon_intersect_chr1:32170707|32176568","exon_intersect_chr1:32170707|32176568"]
["chr1:32832386|32834034:+","chr1:32817656|32817689:+_chr1:32825313|32825429:+_chr1:32826098|32826930:+_chr1:32827993|32828081:+_chr1:32829964|32830067:+_chr1:32832334|32832386:+_chr1:32834034|32841448:+_chr1:32844194|32847722:+_chr1:32853079|32853166:+_chr1:32855924|32855956:+","UN_S100PBP_LS0027","S100PBP","protein coding gene","no",2.92,0.14,0,0.003,28,0.001,1,"0(0)","LAML","no","TE_intersect_:32832269|chr1|32832269|32832441|L1MC5a:L1:LINE|223|+","TE_intersect_:32833828|chr1|32833828|32834146|L1ME4b:L1:LINE|246|-","intron_intersect_chr1:32830067|32834034","exon_intersect_chr1:32834034|32834061"]
["chr1:33559473|33567597:-","chr1:33513919|33516570:-_chr1:33519465|33519677:-_chr1:33519812|33519950:-_chr1:33521463|33521550:-_chr1:33523307|33523419:-_chr1:33524882|33525043:-_chr1:33527196|33527258:-_chr1:33533050|33533229:-_chr1:33533796|33533907:-_chr1:33537022|33537095:-_chr1:33537436|33537609:-_chr1:33540525|33540698:-_chr1:33541130|33541309:-_chr1:33542720|33542896:-_chr1:33546037|33546219:-_chr1:33550177|33550350:-_chr1:33557734|33557922:-_chr1:33559300|33559473:-_chr1:33567597|33567766:-_chr1:33569374|33569547:-_chr1:33571532|33571726:-_chr1:33572506|33572691:-_chr1:33577296|33577484:-_chr1:33580753|33580899:-_chr1:33583642|33583830:-_chr1:33586504|33586617:-_chr1:33587088|33587168:-_chr1:33600865|33601010:-_chr1:33602369|33602477:-","UN_CSMD2_LS0016","CSMD2","protein coding gene","no",0.63,0,0,0.008,73,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr1:33567593|33567841","intron_intersect_chr1:33559473|33567593"]
["chr1:3469593|3472901:+","chr1:3459500|3459531:+_chr1:3463066|3463672:+_chr1:3466148|3466193:+_chr1:3466802|3466914:+_chr1:3467168|3467337:+_chr1:3468880|3468936:+_chr1:3469433|3469593:+_chr1:3472901|3472985:+_chr1:3473078|3473230:+_chr1:3473393|3473522:+_chr1:3474708|3474782:+_chr1:3475970|3476062:+_chr1:3477875|3478612:+_chr1:3479517|3479590:+_chr1:3479812|3479913:+_chr1:3480448|3481108:+","UN_ARHGEF16_LS0029","ARHGEF16","protein coding gene","no",4.46,0,0,0.004,38,0,0,"0(0)","CHOL;PAAD","no","NA","NA","intron_intersect_chr1:3469593|3471607","exon_intersect_chr1:3472769|3473230"]
["chr1:35574692|35577322:-","chr1:35574344|35574692:-_chr1:35577322|35577729:-","UN_TFAP2E_LS0002","TFAP2E","protein coding gene","no",4.02,0,0,0.002,17,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:35577322|35577729","exon_intersect_chr1:35574360|35574698"]
["chr1:36441171|36444601:+","chr1:36440991|36441171:+_chr1:36444601|36444994:+","UN_OSCP1_LS0012","OSCP1","protein coding gene","yes",3.49,0,0,0.002,22,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:36440975|36444004","intron_intersect_chr1:36444033|36447813"]
["chr1:37123995|37133487:+","chr1:37123785|37123995:+_chr1:37133487|37133607:+_chr1:37135227|37136214:+","UN_AL031430.1_UP_LS0008","AL031430.1","lncRNA gene","no",2.15,0,0,0.001,13,0,0,"0(0)","PCPG","no","TE_intersect_:37123915|chr1|37123915|37124022|MIRc:MIR:SINE|295|+","NA","NA","NA"]
["chr1:38310651|38311253:-","chr1:38300199|38300437:-_chr1:38310527|38310651:-_chr1:38311253|38311383:-","UN_LINC01343_UP_LS0005","LINC01343","lncRNA gene","no",3.85,0,0,0.003,24,0,0,"0(0)","TGCT","no","TE_intersect_:38311183|chr1|38311183|38311730|MLT2B4:ERVL:LTR|161|-","TE_intersect_:38309840|chr1|38309840|38310871|L1MC3:L1:LINE|181|-","NA","NA"]
["chr1:39575919|39575988:+","chr1:39575802|39575919:+_chr1:39575988|39576313:+","UN_PABPC4_LS0042","PABPC4","protein coding gene","no",2.4,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:39575759|39576790","exon_intersect_chr1:39575759|39576790"]
["chr1:40926859|40929954:-","chr1:40926635|40926859:-_chr1:40929954|40930047:-_chr1:40954232|40954526:-","UN_CITED4_UP_LS0004","CITED4","protein coding gene","no",21.12,0,0,0.004,36,0,0,"0(0)","CHOL;LIHC","no","TE_intersect_:40929932|chr1|40929932|40930061|FLAM_A:Alu:SINE|194|+","NA","NA","NA"]
["chr1:42926376|42926478:+","chr1:42926161|42926376:+_chr1:42926478|42926930:+_chr1:42927065|42927243:+","UN_SLC2A1_LS0019","SLC2A1","protein coding gene","no",7.14,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr1:42925375|42927241","exon_intersect_chr1:42925375|42927241"]
["chr1:43145004|43145127:+","chr1:43120057|43120272:+_chr1:43144865|43145004:+_chr1:43145127|43145297:+_chr1:43150761|43150820:+_chr1:43152828|43152931:+_chr1:43156206|43156396:+","UN_FAM183A_UP_LS0023","FAM183A","protein coding gene","no",2,0,0,0.014,138,0.001,1,"0(0)","ESCA;KIRC;THYM","no","NA","NA","NA","NA"]
["chr1:43511528|43512795:+","chr1:43506079|43506212:+_chr1:43511420|43511528:+_chr1:43512795|43514066:+","UN_PTPRF_UP_LS0018","PTPRF","protein coding gene","no",7.26,0,0,0.009,83,0,0,"0(0)","TGCT","no","TE_intersect_:43511442|chr1|43511442|43511888|MLT1K:ERVL-MaLR:LTR|239|+","NA","NA","NA"]
["chr1:44010096|44024248:-","chr1:43996483|43997739:-_chr1:43997855|43998025:-_chr1:44000767|44000867:-_chr1:44000956|44001055:-_chr1:44001164|44001298:-_chr1:44001390|44001627:-_chr1:44002313|44002416:-_chr1:44002512|44002646:-_chr1:44002853|44002985:-_chr1:44008353|44008623:-_chr1:44009965|44010096:-_chr1:44024248|44024362:-_chr1:44031306|44031418:-","UN_SLC6A9_LS0067","SLC6A9","protein coding gene","no",1.15,0,0,0.005,49,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr1:44024248|44024362","intron_intersect_chr1:44010096|44010192"]
["chr1:44446559|44446865:-","chr1:44419869|44446559:-_chr1:44446865|44614163:-","UN_RNF220_LS0018","RNF220","protein coding gene","no",10.99,0,0,0.002,18,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr1:44419872|44545493","intron_intersect_chr1:44419872|44545493"]
["chr1:44707389|44721959:-","chr1:44635238|44636457:-_chr1:44645360|44645464:-_chr1:44660174|44660295:-_chr1:44707311|44707389:-_chr1:44721959|44722039:-_chr1:44724585|44724811:-","UN_ARMH1_LS0019","ARMH1","protein coding gene","no",3.16,0.04,0,0.012,111,0.001,1,"0(0)","LAML","no","NA","TE_intersect_:44707291|chr1|44707291|44707430|L2c:L2:LINE|289|+","intron_intersect_chr1:44721902|44723785","intron_intersect_chr1:44704173|44721786"]
["chr1:44989771|44989895:+","chr1:44989701|44989771:+_chr1:44989895|44990090:+_chr1:44991811|44991972:+","UN_MRPS17P1_LS0002","MRPS17P1","pseudogene","no",2.83,0,0,0.006,60,0,0,"0(0)","OV","no","TE_intersect_:44989668|chr1|44989668|44989781|FLAM_A:Alu:SINE|186|-","NA","exon_intersect_chr1:44988234|44991834","exon_intersect_chr1:44988234|44991834"]
["chr1:45729769|45730086:-","chr1:45694319|45694926:-_chr1:45698929|45700190:-_chr1:45714246|45714466:-_chr1:45716895|45717017:-_chr1:45719203|45719340:-_chr1:45727631|45727798:-_chr1:45729614|45729769:-_chr1:45730086|45730475:-","UN_IPP_LS0050","IPP","protein coding gene","no",1.54,0,0,0.006,54,0,0,"0(0)","THCA","no","TE_intersect_:45730065|chr1|45730065|45730376|AluJb:Alu:SINE|193|+","NA","intron_intersect_chr1:45729769|45740901","intron_intersect_chr1:45729769|45740901"]
["chr1:46246596|46247241:+","chr1:46242151|46242502:+_chr1:46246436|46246596:+_chr1:46247241|46247304:+_chr1:46247584|46247746:+_chr1:46248512|46248598:+_chr1:46250000|46250119:+_chr1:46258686|46258746:+_chr1:46259964|46260099:+_chr1:46260542|46260611:+_chr1:46260727|46261015:+_chr1:46261261|46261385:+_chr1:46267459|46267609:+_chr1:46270659|46270785:+_chr1:46272466|46272540:+_chr1:46272672|46272802:+_chr1:46273355|46273465:+_chr1:46273624|46273747:+_chr1:46274138|46274216:+_chr1:46274538|46274717:+_chr1:46277817|46277980:+_chr1:46278072|46278439:+","UN_RAD54L_UP_LS0029","RAD54L","protein coding gene","no",1.59,0,0,0.003,26,0,0,"0(0)","TGCT","no","TE_intersect_:46246589|chr1|46246589|46246748|MIR:MIR:SINE|209|+","NA","NA","NA"]
["chr1:47179647|47179868:+","chr1:47179224|47179647:+_chr1:47179868|47180330:+","UN_LINC00853_LS0012","LINC00853","lncRNA gene","no",2.42,0,0,0.005,45,0,0,"0(0)","CHOL","no","TE_intersect_:47179563|chr1|47179563|47179655|L2c:L2:LINE|294|-","TE_intersect_:47179844|chr1|47179844|47180021|MIRb:MIR:SINE|324|-","intron_intersect_chr1:47179438|47179868","exon_intersect_chr1:47179868|47180339"]
["chr1:47506569|47694195:+","chr1:47494014|47494342:+_chr1:47506401|47506569:+_chr1:47694195|47694234:+_chr1:47702729|47704002:+","UN_AC096541.1_UP_LS0001","AC096541.1","lncRNA gene","no",2.83,0,0,0.017,165,0,0,"0(0)","KIRC","no","TE_intersect_:47506513|chr1|47506513|47506634|MIR3:MIR:SINE|371|-","NA","NA","exon_intersect_chr1:47694195|47694234"]
["chr1:492446|727256:-","chr1:489903|492301:-_chr1:492399|492446:-_chr1:727256|729524:-_chr1:729557|729802:-","UN_OR4F29_UP_LS0006","OR4F29","protein coding gene","no",6.13,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr1:726992|727674","intron_intersect_chr1:491989|492768"]
["chr1:50596216|50612331:-","chr1:50539592|50539728:-_chr1:50567077|50567231:-_chr1:50582618|50582699:-_chr1:50583652|50583715:-_chr1:50584685|50584811:-_chr1:50596121|50596216:-_chr1:50612331|50612473:-","UN_FAF1_LS0032","FAF1","protein coding gene","no",4.77,0,0,0.005,44,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr1:50606944|50655442","intron_intersect_chr1:50596216|50606847"]
["chr1:52401487|52402129:-","chr1:52372839|52373375:-_chr1:52374810|52374897:-_chr1:52375430|52375599:-_chr1:52381642|52381761:-_chr1:52383420|52383569:-_chr1:52383830|52383937:-_chr1:52384550|52384721:-_chr1:52385161|52385262:-_chr1:52385852|52385949:-_chr1:52388442|52388637:-_chr1:52389217|52389321:-_chr1:52393443|52393803:-_chr1:52396046|52396364:-_chr1:52397685|52397863:-_chr1:52401362|52401487:-_chr1:52402129|52402228:-_chr1:52404246|52404450:-","UN_ORC1_LS0012","ORC1","protein coding gene","no",2.25,0,0,0.007,69,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chr1:52402129|52402228","exon_intersect_chr1:52401362|52401489"]
["chr1:53424914|53430213:+","chr1:53424636|53424914:+_chr1:53430213|53433128:+_chr1:53434692|53435079:+","UN_SLC25A3P1_LS0021","SLC25A3P1","pseudogene","no",4.32,0,0,0.003,29,0,0,"0(0)","OV","no","TE_intersect_:53424768|chr1|53424768|53427698|HERVH-int:ERV1:LTR|99|+","TE_intersect_:53430030|chr1|53430030|53430736|LTR49-int:ERV1:LTR|109|+","intron_intersect_chr1:53417666|53437035","intron_intersect_chr1:53417666|53437035"]
["chr1:54900558|54901033:+","chr1:54897550|54900558:+_chr1:54901033|54901207:+_chr1:54908770|54908858:+_chr1:54986097|54986446:+_chr1:54991836|54992293:+","UN_TMEM61_UP_LS0026","TMEM61","protein coding gene","no",1.96,0,0,0.007,64,0,0,"0(0)","OV","no","TE_intersect_:54900194|chr1|54900194|54903183|HERVH-int:ERV1:LTR|98|-","TE_intersect_:54900194|chr1|54900194|54903183|HERVH-int:ERV1:LTR|98|-","NA","NA"]
["chr1:56098833|56133878:-","chr1:56056750|56057116:-_chr1:56098731|56098833:-_chr1:56133878|56134033:-","UN_LINC01753_UP_LS0004","LINC01753","lncRNA gene","no",2.74,0,0,0.005,49,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr1:56726583|56740697:-","chr1:56718939|56719692:-_chr1:56720022|56720055:-_chr1:56720173|56720329:-_chr1:56723588|56723681:-_chr1:56726497|56726583:-_chr1:56740697|56740795:-_chr1:56742161|56742221:-_chr1:56744026|56744066:-_chr1:56744152|56744266:-_chr1:56751044|56751203:-_chr1:56753839|56753935:-_chr1:56755896|56755927:-_chr1:56758716|56758750:-_chr1:56767829|56767938:-_chr1:56787175|56787208:-_chr1:56788973|56789134:-_chr1:56792056|56792803:-_chr1:56819568|56819753:-","UN_FYB2_LS0005","FYB2","protein coding gene","no",3.44,0.03,0,0.008,74,0.003,2,"0(0)","KICH","no","NA","NA","exon_intersect_chr1:56740697|56740795","intron_intersect_chr1:56726583|56731892"]
["chr1:5952836|5961760:-","chr1:5874905|5875100:-_chr1:5877093|5877298:-_chr1:5880114|5880239:-_chr1:5887286|5887466:-_chr1:5890868|5891028:-_chr1:5904617|5904804:-_chr1:5905292|5905483:-_chr1:5905632|5905783:-_chr1:5907115|5907222:-_chr1:5909152|5909213:-_chr1:5927649|5927787:-_chr1:5933147|5933329:-_chr1:5947104|5947230:-_chr1:5948070|5948251:-_chr1:5952700|5952836:-_chr1:5961760|5961949:-_chr1:5967299|5967363:-_chr1:5969087|5969259:-_chr1:5978270|5978413:-_chr1:5986155|5986327:-_chr1:5992244|5992447:-","UN_NPHP4_LS0042","NPHP4","protein coding gene","no",2.36,0,0,0.011,106,0,0,"0(0)","SKCM;THCA","no","NA","NA","intron_intersect_chr1:5952836|5961794","intron_intersect_chr1:5952836|5961794"]
["chr1:60656899|60658428:-","chr1:60655276|60656899:-_chr1:60658428|60659056:-","UN_LINC01748_UP_LS0001","LINC01748","lncRNA gene","no",2.32,0,0,0.01,96,0,0,"0(0)","GBM;KIRP;LGG","no","NA","TE_intersect_:60656698|chr1|60656698|60657085|MLT1B:ERVL-MaLR:LTR|165|-","NA","NA"]
["chr1:60981479|60988645:-","chr1:60981256|60981479:-_chr1:60988645|60988772:-_chr1:60989707|60990137:-","UN_NFIA_LS0042","NFIA","protein coding gene","no",2.36,0,0,0.007,65,0,0,"0(0)","ACC;SARC","no","TE_intersect_:60988577|chr1|60988577|60988979|MER63B:hAT-Blackjack:DNA|226|-","TE_intersect_:60981429|chr1|60981429|60981488|MIRc:MIR:SINE|169|+","intron_intersect_chr1:60970776|61053830","intron_intersect_chr1:60970776|61053830"]
["chr1:62688724|62709638:+","chr1:62688380|62688724:+_chr1:62709638|62714488:+","UN_AC103923.1_LS0002","AC103923.1","lncRNA gene","no",2.28,0,0,0.011,101,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:62709619|chr1|62709619|62709749|FLAM_A:Alu:SINE|215|-","intron_intersect_chr1:62688652|62709638","exon_intersect_chr1:62709638|62710694"]
["chr1:63321463|63324656:-","chr1:63320884|63321190:-_chr1:63321367|63321463:-_chr1:63324656|63324838:-","UN_LINC00466_UP_LS0001","LINC00466","lncRNA gene","no",2.17,0,0,0.007,71,0,0,"0(0)","CESC","no","NA","NA","exon_intersect_chr1:63323041|63325126","exon_intersect_chr1:63321367|63321529"]
["chr1:64156992|64159029:-","chr1:64105322|64107039:-_chr1:64108320|64108393:-_chr1:64110650|64110793:-_chr1:64110883|64110957:-_chr1:64113629|64113791:-_chr1:64127869|64128031:-_chr1:64129100|64129166:-_chr1:64133283|64133475:-_chr1:64133588|64133858:-_chr1:64156938|64156992:-_chr1:64159029|64159171:-_chr1:64169304|64169734:-_chr1:64171209|64171297:-","UN_ROR1_LS0054","ROR1","protein coding gene","no",12.19,0,0,0.005,51,0,0,"0(0)","SARC;SKCM","no","NA","TE_intersect_:64156866|chr1|64156866|64157081|MIR:MIR:SINE|272|+","exon_intersect_chr1:64158981|64159192","intron_intersect_chr1:64143385|64158981"]
["chr1:66367092|66370394:-","chr1:66365764|66367092:-_chr1:66370394|66371033:-","UN_PDE4B_LS0013","PDE4B","protein coding gene","no",1.55,0,0,0.002,23,0,0,"0(0)","PCPG","no","TE_intersect_:66370321|chr1|66370321|66370442|MIRc:MIR:SINE|313|-","NA","intron_intersect_chr1:66368969|66372313","intron_intersect_chr1:66365766|66367494"]
["chr1:67777507|67791643:-","chr1:67701479|67705576:-_chr1:67707594|67707712:-_chr1:67777458|67777507:-_chr1:67791643|67791676:-","UN_GNG12_LS0036","GNG12","protein coding gene","no",4.65,0,0,0.001,14,0,0,"0(0)","MESO","no","TE_intersect_:67791343|chr1|67791343|67792323|L2a:L2:LINE|293|+","NA","intron_intersect_chr1:67777507|67832303","intron_intersect_chr1:67777507|67832303"]
["chr1:68392211|68418501:+","chr1:68386033|68388816:+_chr1:68392084|68392211:+_chr1:68418501|68418532:+_chr1:68420051|68420121:+_chr1:68458455|68458577:+_chr1:68460080|68460239:+_chr1:68461662|68461839:+_chr1:68465131|68465265:+_chr1:68479185|68479309:+_chr1:68482761|68483539:+","UN_AL138789.1_UP_LS0024","AL138789.1","lncRNA gene","no",13.62,0,0,0.005,51,0,0,"0(0)","HNSC","no","TE_intersect_:68392125|chr1|68392125|68392789|LTR17:ERV1:LTR|98|-","NA","NA","NA"]
["chr1:68634674|68637939:+","chr1:68633577|68633767:+_chr1:68634593|68634674:+_chr1:68637939|68640599:+","AL035412.1_LS002","AL035412.1","lncRNA gene","no",2.56,0,0,0.003,27,0,0,"0(0)","GBM","yes","NA","TE_intersect_:68637725|chr1|68637725|68638290|MLT1G3:ERVL-MaLR:LTR|311|+","NA","NA"]
["chr1:72453268|72465435:-","chr1:72452693|72452748:-_chr1:72453202|72453268:-_chr1:72465435|72465527:-_chr1:72466287|72466390:-","UN_NEGR1_UP_LS0004","NEGR1","protein coding gene","no",2.68,0,0,0.004,36,0,0,"0(0)","THYM","no","NA","TE_intersect_:72450691|chr1|72450691|72456879|L1MA4:L1:LINE|224|+","NA","NA"]
["chr1:74590080|74591985:-","chr1:74568111|74570439:-_chr1:74571099|74573491:-_chr1:74576895|74576936:-_chr1:74589631|74590080:-_chr1:74591985|74592143:-","UN_ERICH3_LS0003","ERICH3","protein coding gene","no",3.7,0,0,0.007,65,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:74591923|74592246","intron_intersect_chr1:74590080|74591923"]
["chr1:76112133|76112212:-","chr1:76111292|76112133:-_chr1:76112212|76113347:-","UN_ST6GALNAC3_LS0012","ST6GALNAC3","protein coding gene","no",6.65,0,0,0.005,52,0,0,"0(0)","TGCT","no","TE_intersect_:76111453|chr1|76111453|76113334|SVA_D:SVA:Retroposon|84|-","TE_intersect_:76111453|chr1|76111453|76113334|SVA_D:SVA:Retroposon|84|-","intron_intersect_chr1:76074884|76313800","intron_intersect_chr1:76074884|76313800"]
["chr1:79462796|79493561:-","chr1:79440069|79440203:-_chr1:79442898|79442985:-_chr1:79462542|79462796:-_chr1:79493561|79493802:-","UN_AL353651.2_UP_LS0006","AL353651.2","lncRNA gene","no",4.1,0,0,0.004,42,0,0,"0(0)","OV;TGCT","no","TE_intersect_:79490893|chr1|79490893|79493706|HERVH-int:ERV1:LTR|105|-","NA","NA","NA"]
["chr1:805891|827484:-","chr1:757711|759123:-_chr1:764723|765247:-_chr1:766329|766387:-_chr1:768548|768613:-_chr1:769497|769712:-_chr1:772976|773107:-_chr1:774171|774280:-_chr1:805799|805891:-_chr1:827484|827522:-","UN_AL669831.3_LS0767","AL669831.3","pseudogene","no",6,0,0,0.003,29,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr1:826206|827522","intron_intersect_chr1:805891|806386"]
["chr1:84354529|84369847:+","chr1:84353938|84354529:+_chr1:84369847|84369961:+_chr1:84398326|84398689:+_chr1:84401901|84402078:+_chr1:84408437|84408518:+_chr1:84410838|84410999:+_chr1:84412349|84412546:+_chr1:84414528|84415008:+","UN_SAMD13_LS0014","SAMD13","protein coding gene","no",2.48,0,0,0.002,16,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr1:84350798|84365428","intron_intersect_chr1:84367744|84369904"]
["chr1:85971393|85983257:-","chr1:85727289|85730692:-_chr1:85734749|85734964:-_chr1:85737396|85737505:-_chr1:85744666|85744834:-_chr1:85745441|85745506:-_chr1:85761396|85761422:-_chr1:85761531|85761566:-_chr1:85775674|85775709:-_chr1:85781220|85781273:-_chr1:85783496|85783558:-_chr1:85784113|85784166:-_chr1:85784259|85784366:-_chr1:85786354|85786461:-_chr1:85816788|85816895:-_chr1:85818034|85818087:-_chr1:85823536|85823589:-_chr1:85823685|85823738:-_chr1:85838585|85838638:-_chr1:85841222|85841278:-_chr1:85842068|85842121:-_chr1:85842340|85842393:-_chr1:85847665|85847772:-_chr1:85849353|85849406:-_chr1:85868519|85868626:-_chr1:85868782|85868835:-_chr1:85874649|85874702:-_chr1:85875277|85875330:-_chr1:85877122|85877175:-_chr1:85889560|85889613:-_chr1:85895858|85895902:-_chr1:85896021|85896065:-_chr1:85896356|85896409:-_chr1:85907194|85907247:-_chr1:85908598|85908651:-_chr1:85909950|85910003:-_chr1:85911380|85911433:-_chr1:85961249|85961293:-_chr1:85965009|85965062:-_chr1:85970227|85970271:-_chr1:85971340|85971393:-_chr1:85983257|85983433:-","UN_COL24A1_LS0021","COL24A1","protein coding gene","no",3.46,0,0,0.009,91,0,0,"0(0)","SKCM;UVM","no","NA","NA","intron_intersect_chr1:85971393|85987601","intron_intersect_chr1:85971393|85987601"]
["chr1:88463383|88477832:+","chr1:88463031|88463383:+_chr1:88477832|88477910:+","UN_PKN2-AS1_LS0057","PKN2-AS1","lncRNA gene","no",1.3,0,0,0.002,23,0,0,"0(0)","GBM","no","NA","TE_intersect_:88477807|chr1|88477807|88478105|7SLRNA:srpRNA:srpRNA|154|-","NA","exon_intersect_chr1:88477828|88478114"]
["chr1:89584789|89588313:+","chr1:89568439|89568493:+_chr1:89579591|89579688:+_chr1:89582625|89584789:+_chr1:89588313|89588368:+_chr1:89592771|89597864:+","UN_LRRC8B_LS0031","LRRC8B","protein coding gene","no",0.61,0,0,0.003,30,0,0,"0(0)","STAD","no","NA","TE_intersect_:89588300|chr1|89588300|89588458|MER103C:hAT-Charlie:DNA|285|+","intron_intersect_chr1:89584789|89587903","intron_intersect_chr1:89588085|89592771"]
["chr1:90401127|90419978:-","chr1:90377942|90378194:-_chr1:90395445|90395521:-_chr1:90400760|90401127:-_chr1:90419978|90420105:-","UN_RNU6-695P_UP_LS0016","RNU6-695P","small non-coding RNA gene","no",3.56,0,0,0.009,85,0,0,"0(0)","GBM;LGG","no","TE_intersect_:90419854|chr1|90419854|90423106|L1MA2:L1:LINE|155|+","NA","NA","NA"]
["chr1:92536049|92563642:-","chr1:92508696|92513970:-_chr1:92536037|92536049:-_chr1:92563642|92563737:-_chr1:92605307|92605402:-_chr1:92607581|92607727:-_chr1:92624176|92624334:-_chr1:92625794|92625934:-_chr1:92636202|92636336:-_chr1:92663420|92663452:-_chr1:92665939|92665992:-_chr1:92677158|92677218:-_chr1:92693802|92693899:-_chr1:92694299|92694388:-_chr1:92695310|92695453:-_chr1:92697860|92697985:-_chr1:92702141|92702215:-_chr1:92703395|92703619:-_chr1:92704555|92704744:-_chr1:92736398|92736627:-_chr1:92784836|92785074:-","UN_EVI5_LS0014","EVI5","protein coding gene","yes",4.29,0,0,0.003,25,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr1:92563642|92563737","intron_intersect_chr1:92513970|92563642"]
["chr1:9485856|9955185:-","chr1:9485804|9485856:-_chr1:9955185|9955228:-_chr1:10380532|10380951:-","UN_AL928921.2_UP_LS0021","AL928921.2","lncRNA gene","no",9.57,0,0,0.002,20,0,0,"0(0)","GBM","no","TE_intersect_:9955121|chr1|9955121|9955430|AluSq2:Alu:SINE|68|+","TE_intersect_:9485792|chr1|9485792|9486099|AluSx1:Alu:SINE|98|+","intron_intersect_chr1:9949974|9967381","NA"]
["chr1:96520424|96521076:+","chr1:96518934|96519033:+_chr1:96520335|96520424:+_chr1:96521076|96521421:+_chr1:96524246|96524562:+_chr1:96528660|96528785:+","UN_RN7SL831P_UP_LS0022","RN7SL831P","small non-coding RNA gene","no",5.61,0.01,0,0.001,13,0.001,1,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr1:98893104|98912919:-","chr1:98890972|98893104:-_chr1:98912919|98912981:-_chr1:98914786|98914920:-_chr1:98921882|98922058:-_chr1:98953070|98953320:-_chr1:98956609|98956741:-_chr1:99004435|99004893:-","UN_PLPPR5_LS0001","PLPPR5","protein coding gene","no",3.01,0,0,0.025,235,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr1:98893104|98914786","intron_intersect_chr1:98893104|98914786"]
["chr1:9983441|10152044:+","chr1:9981052|9981170:+_chr1:9982301|9983441:+_chr1:10152044|10152181:+","UN_RNU6-828P_UP_LS0001","RNU6-828P","small non-coding RNA gene","no",1.09,0,0,0.002,21,0,0,"0(0)","GBM","no","TE_intersect_:9983372|chr1|9983372|9983669|AluSx3:Alu:SINE|94|+","TE_intersect_:10151978|chr1|10151978|10152259|AluSx3:Alu:SINE|92|+","exon_intersect_chr1:9982301|9985501","intron_intersect_chr1:10151561|10158354"]
["chr10:101035547|101036003:+","chr10:101031825|101032482:+_chr10:101034692|101034855:+_chr10:101035497|101035547:+_chr10:101036003|101036101:+_chr10:101036486|101036561:+_chr10:101036723|101036808:+_chr10:101037076|101037203:+_chr10:101037382|101037431:+_chr10:101037508|101041261:+","SFXN3_LS005","SFXN3","protein coding gene","no",2.32,0,0,0.002,19,0,0,"0(0)","PAAD","yes","NA","NA","exon_intersect_chr10:101035497|101035667","exon_intersect_chr10:101036003|101036101"]
["chr10:102109165|102109451:+","chr10:102106585|102106935:+_chr10:102107007|102107372:+_chr10:102107697|102107839:+_chr10:102107900|102108057:+_chr10:102109031|102109165:+_chr10:102109451|102109540:+","UN_LDB1_LS0048","LDB1","protein coding gene","no",0.4,0,0,0.002,19,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr10:102109029|102109177","exon_intersect_chr10:102109384|102109507"]
["chr10:102699489|102714273:-","chr10:102676675|102676941:-_chr10:102685816|102686001:-_chr10:102689893|102689943:-_chr10:102699373|102699489:-_chr10:102714273|102714407:-","UN_ARL3_LS0015","ARL3","protein coding gene","no",31.33,0,0,0.007,69,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr10:102714273|102714407","intron_intersect_chr10:102699489|102705346"]
["chr10:103529937|103570872:+","chr10:103493979|103494472:+_chr10:103529824|103529937:+_chr10:103570872|103571822:+_chr10:103584536|103585225:+_chr10:103589514|103589660:+_chr10:103590134|103594029:+","UN_NEURL1_LS0012","NEURL1","protein coding gene","yes",1.72,0,0,0.002,19,0,0,"0(0)","KICH","no","TE_intersect_:103529865|chr10|103529865|103530067|MER41B:ERV1:LTR|176|-","NA","intron_intersect_chr10:103517393|103549075","exon_intersect_chr10:103570872|103571113"]
["chr10:106286510|106309933:+","chr10:106286416|106286510:+_chr10:106309933|106310056:+_chr10:106310838|106310956:+","UN_RPL23AP59_UP_LS0008","RPL23AP59","pseudogene","no",2.38,0,0,0.005,49,0,0,"0(0)","SKCM","no","TE_intersect_:106286242|chr10|106286242|106286593|THE1B:ERVL-MaLR:LTR|94|+","NA","NA","NA"]
["chr10:109953940|109996815:-","chr10:109945567|109946295:-_chr10:109947196|109947276:-_chr10:109950323|109950458:-_chr10:109953756|109953940:-_chr10:109996815|109996864:-","UN_ADD3-AS1_LS0009","ADD3-AS1","lncRNA gene","no",1.64,0,0,0.003,31,0,0,"0(0)","READ","no","NA","TE_intersect_:109953667|chr10|109953667|109954091|MLT1J2:ERVL-MaLR:LTR|283|-","intron_intersect_chr10:109996446|109997514","exon_intersect_chr10:109951844|109957911"]
["chr10:113160691|113161576:+","chr10:113151771|113151884:+_chr10:113152333|113152440:+_chr10:113158021|113158069:+_chr10:113158667|113158717:+_chr10:113159920|113159992:+_chr10:113160619|113160691:+_chr10:113161576|113161603:+_chr10:113165555|113165632:+","UN_TCF7L2_LS0042","TCF7L2","protein coding gene","yes",1.61,0,0,0.001,14,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr10:113160691|113161231","exon_intersect_chr10:113161231|113161603"]
["chr10:115949840|116096507:+","chr10:115949499|115949840:+_chr10:116096507|116096605:+_chr10:116107606|116107722:+_chr10:116108561|116108866:+_chr10:116111217|116113307:+","UN_AC012470.1_UP_LS0002","AC012470.1","no","no",4.6,0,0,0.004,42,0,0,"0(0)","TGCT","no","NA","NA","NA","intron_intersect_chr10:116093836|116096655"]
["chr10:117570741|117570923:-","chr10:117566562|117570741:-_chr10:117570923|117572466:-_chr10:117590712|117592095:-_chr10:117629720|117630349:-","UN_AC005871.1_LS0001","AC005871.1","lncRNA gene","no",2.63,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr10:117566144|117572296","intron_intersect_chr10:117566144|117572296"]
["chr10:118595632|118595838:-","chr10:118589989|118595250:-_chr10:118595516|118595632:-_chr10:118595838|118596765:-","UN_FAM204A_UP_LS0018","FAM204A","protein coding gene","no",1.67,0,0,0.016,157,0,0,"0(0)","LGG","no","NA","NA","NA","exon_intersect_chr10:118595516|118595699"]
["chr10:119460184|119461088:-","chr10:119459543|119459701:-_chr10:119459963|119460184:-_chr10:119461088|119461230:-","UN_AL583824.1_UP_LS0002","AL583824.1","lncRNA gene","no",6.83,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr10:11964125|11964733:-","chr10:11920023|11921307:-_chr10:11929865|11929985:-_chr10:11931641|11931782:-_chr10:11936545|11936712:-_chr10:11942665|11942763:-_chr10:11943064|11943168:-_chr10:11948369|11948508:-_chr10:11952066|11952249:-_chr10:11955232|11955507:-_chr10:11956320|11956523:-_chr10:11959171|11959356:-_chr10:11964009|11964125:-_chr10:11964733|11964836:-_chr10:11967341|11967454:-_chr10:11979057|11979165:-_chr10:11997672|11997757:-_chr10:11999906|12000009:-_chr10:12001676|12001825:-_chr10:12004530|12004727:-_chr10:12014024|12014184:-_chr10:12028745|12029524:-_chr10:12035059|12035441:-_chr10:12042755|12042834:-","UN_UPF2_LS0017","UPF2","protein coding gene","no",6.77,0,0,0.001,13,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr10:11964125|11967341","intron_intersect_chr10:11964125|11967341"]
["chr10:12149961|12153707:+","chr10:12149856|12149961:+_chr10:12153707|12157067:+_chr10:12157908|12158043:+","UN_SEC61A2_LS0007","SEC61A2","protein coding gene","no",0.9,0,0,0.008,77,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr10:12149961|12153738","intron_intersect_chr10:12149961|12153738"]
["chr10:121690835|121695707:+","chr10:121690669|121690835:+_chr10:121695707|121695774:+_chr10:121698935|121699023:+_chr10:121699799|121700250:+","UN_RPS15AP5_UP_LS0012","RPS15AP5","pseudogene","no",1.89,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr10:12247246|12247347:-","chr10:12240056|12247144:-_chr10:12247179|12247246:-_chr10:12247347|12247480:-_chr10:12247515|12247845:-","UN_CDC123_LS0023","CDC123","protein coding gene","no",2.97,0,0,0.001,12,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr10:12247108|12247413","intron_intersect_chr10:12247108|12247413"]
["chr10:124012480|124020349:-","chr10:124007673|124010339:-_chr10:124012333|124012480:-_chr10:124020349|124021412:-_chr10:124038515|124038619:-","UN_CHST15_LS0009","CHST15","protein coding gene","no",2.24,0,0,0.003,25,0,0,"0(0)","TGCT","no","TE_intersect_:124020187|chr10|124020187|124020357|MIRb:MIR:SINE|307|-","NA","exon_intersect_chr10:124019653|124021412","intron_intersect_chr10:124012480|124019653"]
["chr10:12519587|12519762:-","chr10:12518074|12519587:-_chr10:12519762|12520942:-","UN_CAMK1D_LS0041","CAMK1D","protein coding gene","yes",1.56,0,0,0.002,21,0,0,"0(0)","ESCA","no","TE_intersect_:12518509|chr10|12518509|12520925|SVA_E:SVA:Retroposon|79|-","TE_intersect_:12518509|chr10|12518509|12520925|SVA_E:SVA:Retroposon|79|-","intron_intersect_chr10:12456631|12553225","intron_intersect_chr10:12456631|12553225"]
["chr10:127339444|127343646:+","chr10:127339289|127339444:+_chr10:127343646|127343746:+_chr10:127354669|127354727:+_chr10:127362064|127362212:+_chr10:127373781|127373866:+_chr10:127374058|127374214:+_chr10:127380082|127380122:+_chr10:127381278|127381368:+_chr10:127384790|127384909:+_chr10:127403055|127403144:+_chr10:127404325|127404429:+_chr10:127409037|127409178:+_chr10:127409313|127409391:+_chr10:127410840|127410924:+_chr10:127415152|127415238:+_chr10:127418365|127418541:+_chr10:127419666|127419749:+_chr10:127425874|127426011:+_chr10:127433283|127433428:+_chr10:127439027|127439225:+_chr10:127444126|127444279:+_chr10:127447394|127447545:+_chr10:127451332|127452517:+","UN_DOCK1_LS0081","DOCK1","protein coding gene","no",3.53,0,0,0.003,26,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr10:127339084|127343646","exon_intersect_chr10:127343646|127343746"]
["chr10:127792412|127794247:+","chr10:127777191|127777509:+_chr10:127792247|127792412:+_chr10:127794247|127794472:+","UN_BUB1P1_UP_LS0004","BUB1P1","pseudogene","no",4.74,0,0,0.002,18,0,0,"0(0)","KICH","no","NA","TE_intersect_:127794050|chr10|127794050|127794821|LTR1F:ERV1:LTR|127|+","NA","NA"]
["chr10:128104165|128104895:+","chr10:128104062|128104165:+_chr10:128104895|128104950:+_chr10:128106403|128106529:+","UN_MKI67_LS0082","MKI67","protein coding gene","no",5.14,0,0,0.006,54,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr10:128102579|128109423","exon_intersect_chr10:128102579|128109423"]
["chr10:128108034|128108401:+","chr10:128106971|128107150:+_chr10:128107877|128108034:+_chr10:128108401|128108473:+","UN_MKI67_LS0269","MKI67","protein coding gene","no",0.44,0,0,0.002,22,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr10:128102579|128109423","exon_intersect_chr10:128102579|128109423"]
["chr10:128927302|128928118:-","chr10:128927196|128927302:-_chr10:128928118|128928626:-","UN_AL390763.1_UP_LS0038","AL390763.1","lncRNA gene","no",6.59,0,0,0.006,61,0,0,"0(0)","UCS","no","NA","NA","NA","NA"]
["chr10:131755438|131755927:+","chr10:131751746|131752030:+_chr10:131755328|131755438:+_chr10:131755927|131756265:+","UN_FP565171.1_UP_LS0018","FP565171.1","lncRNA gene","no",3.8,0,0,0.012,113,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:131755415|chr10|131755415|131755515|MER45R:hAT-Tip100:DNA|306|+","NA","NA","NA"]
["chr10:132104943|132114412:+","chr10:132104788|132104943:+_chr10:132114412|132114475:+","UN_JAKMIP3_LS0002","JAKMIP3","protein coding gene","no",3.1,0,0,0.011,109,0,0,"0(0)","ESCA;LUSC","no","NA","TE_intersect_:132114217|chr10|132114217|132114512|AluJb:Alu:SINE|152|-","intron_intersect_chr10:132104943|132117077","intron_intersect_chr10:132104943|132117077"]
["chr10:133013803|133014028:+","chr10:133013576|133013803:+_chr10:133014028|133014136:+_chr10:133014324|133014614:+_chr10:133015233|133017092:+","UN_ADGRA1_UP_LS0010","ADGRA1","protein coding gene","no",2.58,0,0,0.005,52,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr10:133221668|133224659:+","chr10:133160215|133167579:+_chr10:133168254|133168312:+_chr10:133183344|133183490:+_chr10:133183872|133183989:+_chr10:133185974|133186674:+_chr10:133188539|133188653:+_chr10:133189598|133189669:+_chr10:133189752|133189813:+_chr10:133195663|133195821:+_chr10:133197058|133197135:+_chr10:133197675|133197768:+_chr10:133198337|133198499:+_chr10:133198578|133199266:+_chr10:133199458|133199602:+_chr10:133200375|133200460:+_chr10:133201501|133201898:+_chr10:133206685|133206778:+_chr10:133206856|133206953:+_chr10:133207137|133207351:+_chr10:133209805|133209924:+_chr10:133210611|133210724:+_chr10:133211422|133211569:+_chr10:133211679|133211858:+_chr10:133212716|133212922:+_chr10:133213645|133213727:+_chr10:133213972|133214122:+_chr10:133218831|133218953:+_chr10:133219031|133219090:+_chr10:133219955|133220112:+_chr10:133220928|133221668:+_chr10:133224659|133226419:+","UN_KNDC1_LS0049","KNDC1","protein coding gene","no",4.87,0,0,0.005,50,0,0,"0(0)","CHOL;PCPG","no","NA","NA","intron_intersect_chr10:133220112|133224659","exon_intersect_chr10:133224659|133226412"]
["chr10:133648774|133650777:+","chr10:133648703|133648774:+_chr10:133650777|133652035:+","UN_DUX4L28_UP_LS0008","DUX4L28","pseudogene","no",1.43,0,0,0.002,22,0,0,"0(0)","OV","no","NA","TE_intersect_:133649625|chr10|133649625|133650802|L1MB3:L1:LINE|224|-","NA","NA"]
["chr10:14568379|14568601:+","chr10:14556203|14568379:+_chr10:14568601|14571766:+","UN_FAM107B_LS0062","FAM107B","protein coding gene","no",20.42,0,0,0.003,25,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr10:14556414|14571763","intron_intersect_chr10:14556414|14571763"]
["chr10:15186839|15189762:-","chr10:15185961|15186839:-_chr10:15189762|15189956:-","UN_AL590365.1_UP_LS0002","AL590365.1","pseudogene","no",2.41,0,0,0.006,62,0,0,"0(0)","CHOL","no","NA","NA","NA","NA"]
["chr10:17492994|17497763:-","chr10:17420422|17454751:-_chr10:17492873|17492994:-_chr10:17497763|17497912:-_chr10:17540806|17540878:-_chr10:17543702|17543789:-_chr10:17553802|17553894:-_chr10:17562599|17562750:-_chr10:17585104|17585236:-","UN_ST8SIA6_UP_LS0007","ST8SIA6","protein coding gene","no",3.08,0,0,0.006,55,0,0,"0(0)","LAML","no","NA","TE_intersect_:17492714|chr10|17492714|17493015|AluSx:Alu:SINE|116|+","NA","NA"]
["chr10:18109901|18114053:-","chr10:18109752|18109901:-_chr10:18114053|18114159:-_chr10:18136262|18136445:-","UN_SLC39A12-AS1_UP_LS0004","SLC39A12-AS1","lncRNA gene","no",2.67,0,0,0.004,43,0,0,"0(0)","LGG","no","NA","NA","NA","NA"]
["chr10:20607098|20609861:+","chr10:20370323|20370755:+_chr10:20515689|20515770:+_chr10:20606315|20606374:+_chr10:20607032|20607098:+_chr10:20609861|20611799:+","UN_MTND1P21_UP_LS0026","MTND1P21","pseudogene","no",3.34,0,0,0.011,110,0,0,"0(0)","PRAD","no","NA","NA","NA","NA"]
["chr10:22817330|22818173:-","chr10:22817182|22817330:-_chr10:22818173|22818280:-","UN_PIP4K2A_UP_LS0001","PIP4K2A","protein coding gene","no",3.93,0,0,0.003,28,0,0,"0(0)","UVM","no","TE_intersect_:22817986|chr10|22817986|22818273|AluJr:Alu:SINE|150|-","TE_intersect_:22817172|chr10|22817172|22817340|MLT1B:ERVL-MaLR:LTR|202|-","NA","NA"]
["chr10:25460044|25635075:-","chr10:25408985|25409788:-_chr10:25459950|25460044:-_chr10:25635075|25635147:-_chr10:25644668|25644799:-_chr10:25644885|25645029:-","UN_RN7SKP220_UP_LS0002","RN7SKP220","small non-coding RNA gene","no",3.9,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","NA","intron_intersect_chr10:25412473|25466190"]
["chr10:25686640|25716745:+","chr10:25651775|25651799:+_chr10:25652869|25653042:+_chr10:25668216|25668330:+_chr10:25685850|25685971:+_chr10:25686373|25686640:+_chr10:25716745|25716981:+_chr10:25731621|25732935:+","UN_LINC00836_LS0033","LINC00836","lncRNA gene","no",2.3,0,0,0.016,149,0,0,"0(0)","LGG","no","NA","TE_intersect_:25716420|chr10|25716420|25716832|LTR7:ERV1:LTR|98|+","intron_intersect_chr10:25683385|25691537","exon_intersect_chr10:25716745|25716981"]
["chr10:2607007|2610869:-","chr10:2603115|2607007:-_chr10:2610869|2611111:-","UN_AC024908.1_UP_LS0007","AC024908.1","lncRNA gene","no",2.54,0,0,0.003,32,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr10:26649048|26649391:+","chr10:26648100|26648282:+_chr10:26648951|26649048:+_chr10:26649391|26649593:+_chr10:26650554|26650791:+_chr10:26653065|26653111:+","UN_FAM238B_LS0001","FAM238B","pseudogene","no",20.11,0,0,0.012,118,0,0,"0(0)","TGCT;THYM;UCS","no","TE_intersect_:26648911|chr10|26648911|26649208|AluSz:Alu:SINE|185|-","NA","exon_intersect_chr10:26648951|26649050","exon_intersect_chr10:26649332|26649593"]
["chr10:27296554|27296604:-","chr10:27290327|27296554:-_chr10:27296604|27297344:-","UN_LRRC37A6P_UP_LS0009","LRRC37A6P","pseudogene","no",1.38,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:27296553|chr10|27296553|27297482|SVA_F:SVA:Retroposon|73|-","TE_intersect_:27296553|chr10|27296553|27297482|SVA_F:SVA:Retroposon|73|-","NA","NA"]
["chr10:29736006|29736099:+","chr10:29735849|29736006:+_chr10:29736099|29736287:+","UN_SVIL_LS0136","SVIL","protein coding gene","no",3.55,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr10:29735804|29736685","intron_intersect_chr10:29735804|29736685"]
["chr10:31167170|31205014:-","chr10:31166915|31167170:-_chr10:31205014|31205119:-_chr10:31320283|31320554:-","UN_ZNF438_UP_LS0014","ZNF438","protein coding gene","no",4.45,0,0,0.006,55,0,0,"0(0)","GBM;LGG","no","TE_intersect_:31204931|chr10|31204931|31205328|MSTB:ERVL-MaLR:LTR|126|-","TE_intersect_:31166970|chr10|31166970|31167194|AluSx3:Alu:SINE|174|+","intron_intersect_chr10:31188199|31206278","NA"]
["chr10:31611037|31620780:-","chr10:31608435|31610296:-_chr10:31610953|31611037:-_chr10:31620780|31620960:-","UN_AL117340.1_UP_LS0006","AL117340.1","pseudogene","no",3.84,0,0,0.006,53,0,0,"0(0)","SKCM","no","NA","TE_intersect_:31610685|chr10|31610685|31611127|Tigger5b:TcMar-Tigger:DNA|154|-","NA","NA"]
["chr10:356070|356426:-","chr10:354694|356070:-_chr10:356426|356506:-_chr10:357828|357937:-_chr10:362490|362691:-_chr10:363197|363311:-_chr10:364374|364582:-_chr10:366275|366411:-_chr10:369494|369633:-_chr10:369961|370166:-","UN_DIP2C_LS0046","DIP2C","protein coding gene","no",5.07,0,0,0.003,25,0,0,"0(0)","UCS","no","NA","TE_intersect_:355794|chr10|355794|356099|AluSx1:Alu:SINE|134|+","exon_intersect_chr10:356426|356506","intron_intersect_chr10:349454|356426"]
["chr10:38087540|38087778:-","chr10:38083945|38084248:-_chr10:38087503|38087540:-_chr10:38087778|38087863:-_chr10:38090438|38090604:-_chr10:38157109|38157496:-","UN_EIF3LP3_UP_LS0003","EIF3LP3","pseudogene","no",6.99,0,0,0.01,92,0,0,"0(0)","SKCM","no","TE_intersect_:38087590|chr10|38087590|38087881|AluJr:Alu:SINE|151|+","TE_intersect_:38087440|chr10|38087440|38087572|MER68-int:ERVL:LTR|156|-","NA","NA"]
["chr10:3851184|3872788:-","chr10:3849293|3851184:-_chr10:3872788|3873033:-","UN_KLF6_UP_LS0015","KLF6","protein coding gene","yes",4.18,0,0,0.003,32,0,0,"0(0)","KIRP","no","NA","TE_intersect_:3850914|chr10|3850914|3851198|AluJb:Alu:SINE|176|+","NA","NA"]
["chr10:42644843|42654622:-","chr10:42589107|42594699:-_chr10:42614282|42614358:-_chr10:42631929|42632024:-_chr10:42632295|42632439:-_chr10:42636920|42636972:-_chr10:42640181|42644843:-_chr10:42654622|42654675:-_chr10:42672562|42674357:-_chr10:42683358|42683460:-_chr10:42685951|42686016:-_chr10:42690576|42690692:-_chr10:42691535|42691723:-","UN_ZNF33B_UP_LS0001","ZNF33B","protein coding gene","no",2.23,0,0,0.001,11,0,0,"0(0)","THYM","no","TE_intersect_:42654446|chr10|42654446|42654969|HERV1_LTRa:ERV1:LTR|60|+","NA","NA","NA"]
["chr10:42784764|42785482:+","chr10:42784741|42784764:+_chr10:42785482|42785672:+_chr10:42787168|42787247:+_chr10:42790323|42790511:+_chr10:42791627|42791769:+_chr10:42792493|42792614:+_chr10:42792957|42793144:+_chr10:42793852|42793991:+_chr10:42796474|42797231:+_chr10:42797422|42797523:+_chr10:42798468|42798625:+_chr10:42802137|42802218:+_chr10:42816599|42816672:+_chr10:42817318|42817494:+_chr10:42820236|42820424:+_chr10:42820508|42820688:+_chr10:42820934|42820992:+_chr10:42822062|42822184:+_chr10:42823118|42823265:+_chr10:42823609|42823784:+_chr10:42830261|42830422:+_chr10:42830866|42831402:+","UN_BMS1_LS0009","BMS1","protein coding gene","no",2.09,0,0,0.011,105,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr10:42784570|42785482","exon_intersect_chr10:42785482|42785672"]
["chr10:45146945|45194141:-","chr10:45141813|45142154:-_chr10:45146828|45146945:-_chr10:45194141|45194256:-","UN_CEP164P1_UP_LS0003","CEP164P1","pseudogene","no",3.98,0,0,0.005,51,0,0,"0(0)","UCS","no","NA","TE_intersect_:45146692|chr10|45146692|45146973|AluSq2:Alu:SINE|123|+","exon_intersect_chr10:45194141|45194254","intron_intersect_chr10:45146945|45147062"]
["chr10:46006597|46008401:-","chr10:46006427|46006597:-_chr10:46008401|46008447:-_chr10:46009411|46009551:-_chr10:46010223|46011206:-_chr10:46012883|46013026:-_chr10:46013550|46013639:-_chr10:46014444|46014552:-_chr10:46014854|46014942:-_chr10:46015126|46015266:-_chr10:46016540|46016694:-_chr10:46023330|46023455:-","UN_NCOA4_LS0012","NCOA4","protein coding gene","yes",5.09,0.22,0,0.003,32,0.006,4,"0(0)","LAML","no","TE_intersect_:46007888|chr10|46007888|46009133|Tigger1:TcMar-Tigger:DNA|117|+","NA","intron_intersect_chr10:46006597|46009124","intron_intersect_chr10:46006597|46009124"]
["chr10:46357116|46357239:+","chr10:46349910|46353241:+_chr10:46356543|46357116:+_chr10:46357239|46358714:+","UN_AGAP14P_LS0007","AGAP14P","pseudogene","no",0.98,0,0,0.005,47,0.001,1,"0(0)","LAML","no","TE_intersect_:46356815|chr10|46356815|46357138|AluSx3:Alu:SINE|122|-","NA","intron_intersect_chr10:46356593|46357239","exon_intersect_chr10:46357239|46358714"]
["chr10:47461961|47462309:-","chr10:47460162|47461961:-_chr10:47462309|47462366:-","UN_ANXA8_LS0002","ANXA8","protein coding gene","no",1.6,0,0,0.003,24,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr10:47461961|47462583","intron_intersect_chr10:47461961|47462583"]
["chr10:48289539|48300569:-","chr10:48289106|48289539:-_chr10:48300569|48300800:-","UN_FRMPD2_UP_LS0001","FRMPD2","protein coding gene","no",2.74,0,0,0.002,23,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr10:49389065|49390133:-","chr10:49364181|49366381:-_chr10:49386478|49386590:-_chr10:49386680|49386858:-_chr10:49388095|49388289:-_chr10:49388969|49389065:-_chr10:49390133|49390234:-_chr10:49391164|49391261:-_chr10:49395407|49395521:-_chr10:49398478|49398976:-","UN_DRGX_LS0006","DRGX","protein coding gene","no",8.51,0,0,0.011,108,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr10:49390133|49390234","intron_intersect_chr10:49386858|49390133"]
["chr10:5004014|5010344:-","chr10:4989789|4990038:-_chr10:4991831|4991913:-_chr10:4995319|4995484:-_chr10:4995756|4995865:-_chr10:4998625|4998747:-_chr10:4999200|4999277:-_chr10:5000550|5000666:-_chr10:5001514|5001681:-_chr10:5003752|5004014:-_chr10:5010344|5010653:-_chr10:5017900|5017934:-","AKR1C2_LS043","AKR1C2","protein coding gene","no",26.79,0,0,0.008,79,0,0,"0(0)","LIHC;LUSC","yes","NA","NA","exon_intersect_chr10:5010344|5010653","exon_intersect_chr10:5003752|5004023"]
["chr10:50125241|50127583:+","chr10:50119650|50119769:+_chr10:50125113|50125241:+_chr10:50127583|50127795:+_chr10:50129419|50130039:+_chr10:50130901|50131078:+_chr10:50132806|50133506:+","UN_WASHC2A_LS0020","WASHC2A","protein coding gene","no",3.95,0,0,0.005,46,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr10:50125241|50125369","exon_intersect_chr10:50127583|50127795"]
["chr10:52561115|52609905:-","chr10:52557003|52557141:-_chr10:52561006|52561115:-_chr10:52609905|52609971:-_chr10:52614067|52614145:-","UN_LNCAROD_LS0028","LNCAROD","lncRNA gene","no",4.87,0.01,0,0.019,180,0.001,1,"0(0)","LAML;LIHC;SKCM","no","NA","NA","intron_intersect_chr10:52561115|52755310","intron_intersect_chr10:52561115|52755310"]
["chr10:53022960|53023264:-","chr10:53002689|53003163:-_chr10:53022824|53022960:-_chr10:53023264|53023517:-","UN_AC073174.1_UP_LS0002","AC073174.1","lncRNA gene","no",2.04,0,0,0.009,83,0,0,"0(0)","BLCA;OV","no","TE_intersect_:53023179|chr10|53023179|53023913|LTR8:ERV1:LTR|189|+","TE_intersect_:53022648|chr10|53022648|53023179|MER50:ERV1:LTR|207|+","NA","NA"]
["chr10:5525805|5525840:-","chr10:5524976|5525433:-_chr10:5525588|5525621:-_chr10:5525679|5525805:-_chr10:5525840|5525963:-_chr10:5526068|5526246:-","UN_CALML3_LS0043","CALML3","protein coding gene","no",46.16,0,0,0.002,20,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr10:5524009|5526771","exon_intersect_chr10:5524009|5526771"]
["chr10:5610436|5610823:-","chr10:5594991|5595579:-_chr10:5596011|5596284:-_chr10:5597114|5603540:-_chr10:5603934|5604607:-_chr10:5606544|5610436:-_chr10:5610823|5616331:-","UN_AL365356.5_UP_LS0042","AL365356.5","lncRNA gene","no",1.7,0,0,0.012,112,0,0,"0(0)","BLCA","no","NA","NA","NA","intron_intersect_chr10:5610436|5610732"]
["chr10:59302864|59303084:-","chr10:59269947|59270109:-_chr10:59283363|59283447:-_chr10:59302801|59302864:-_chr10:59303084|59303336:-","UN_FAM13C_LS0008","FAM13C","protein coding gene","no",5.15,0,0,0.002,20,0,0,"0(0)","KICH","no","TE_intersect_:59302952|chr10|59302952|59303486|L2a:L2:LINE|290|+","NA","intron_intersect_chr10:59302864|59323230","intron_intersect_chr10:59302864|59323230"]
["chr10:61794465|61798578:-","chr10:61700408|61716016:-_chr10:61794351|61794465:-_chr10:61798578|61798853:-","UN_AC022398.1_LS0001","AC022398.1","lncRNA gene","no",2.54,0,0,0.009,86,0,0,"0(0)","KIRC;KIRP","no","NA","NA","intron_intersect_chr10:61794465|61820134","intron_intersect_chr10:61794465|61820134"]
["chr10:6580274|6580304:-","chr10:6427123|6428362:-_chr10:6430810|6430938:-_chr10:6441893|6442081:-_chr10:6456674|6456812:-_chr10:6462303|6462365:-_chr10:6464313|6464404:-_chr10:6478992|6479165:-_chr10:6483440|6483600:-_chr10:6485152|6485269:-_chr10:6486035|6486144:-_chr10:6491683|6491812:-_chr10:6497035|6497120:-_chr10:6497220|6497251:-_chr10:6498396|6498558:-_chr10:6507436|6507496:-_chr10:6510995|6511194:-_chr10:6515018|6515144:-_chr10:6580211|6580274:-_chr10:6580304|6580328:-","UN_SDCBPP1_UP_LS0006","SDCBPP1","pseudogene","no",0.36,0,0,0.007,68,0,0,"0(0)","OV","no","NA","NA","NA","exon_intersect_chr10:6580211|6580301"]
["chr10:69202620|69202867:+","chr10:69202575|69202620:+_chr10:69202867|69203043:+_chr10:69207793|69207941:+_chr10:69208600|69209098:+","UN_SUPV3L1_LS0020","SUPV3L1","protein coding gene","no",3.58,0,0,0.006,61,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr10:69202519|69202867","exon_intersect_chr10:69202867|69203043"]
["chr10:69833100|69837614:-","chr10:69830331|69833100:-_chr10:69837614|69837782:-_chr10:69860091|69860775:-","UN_COL13A1_LS0007","COL13A1","protein coding gene","no",1.81,0,0,0.002,19,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr10:69822438|69859214","intron_intersect_chr10:69822438|69859214"]
["chr10:70686845|70687025:-","chr10:70683986|70686845:-_chr10:70687025|70687429:-_chr10:70687606|70688908:-","UN_ADAMTS14_LS0005","ADAMTS14","protein coding gene","no",1.67,0,0,0.002,15,0,0,"0(0)","ESCA","no","TE_intersect_:70686281|chr10|70686281|70687322|SVA_F:SVA:Retroposon|54|-","TE_intersect_:70686281|chr10|70686281|70687322|SVA_F:SVA:Retroposon|54|-","intron_intersect_chr10:70674995|70702312","intron_intersect_chr10:70674995|70702312"]
["chr10:70777335|70777762:-","chr10:70771240|70771461:-_chr10:70772514|70772566:-_chr10:70774213|70774357:-_chr10:70775189|70775270:-_chr10:70777153|70777335:-_chr10:70777762|70777857:-_chr10:70778557|70778633:-_chr10:70779593|70779742:-_chr10:70781801|70782510:-","TBATA_LS022","TBATA","protein coding gene","no",17.2,0.18,0,0.006,55,0.001,1,"0(0)","THYM","yes","NA","NA","intron_intersect_chr10:70777338|70778557","exon_intersect_chr10:70777153|70777338"]
["chr10:71004365|71005683:-","chr10:71003044|71004365:-_chr10:71005683|71005818:-","UN_AC073176.3_LS0009","AC073176.3","lncRNA gene","no",0.92,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr10:71885338|71888849:+","chr10:71885153|71885338:+_chr10:71888849|71889151:+","UN_CHST3_UP_LS0004","CHST3","protein coding gene","no",2.62,0,0,0.002,21,0,0,"0(0)","THYM","no","TE_intersect_:71885111|chr10|71885111|71885611|MER4CL34:ERV1:LTR|230|+","NA","NA","NA"]
["chr10:72335931|72336267:-","chr10:72332831|72334617:-_chr10:72335603|72335931:-_chr10:72336267|72336865:-","UN_DNAJB12_LS0016","DNAJB12","protein coding gene","no",8.26,0,0,0.021,203,0,0,"0(0)","ACC;BRCA;KIRC;MESO;PCPG;THYM","no","NA","NA","intron_intersect_chr10:72335931|72336524","intron_intersect_chr10:72335931|72336524"]
["chr10:75234344|75234378:+","chr10:75210522|75210938:+_chr10:75211134|75211189:+_chr10:75212230|75212298:+_chr10:75214021|75214070:+_chr10:75219063|75219215:+_chr10:75219304|75219356:+_chr10:75220743|75220970:+_chr10:75222252|75222402:+_chr10:75229644|75229701:+_chr10:75230898|75234344:+_chr10:75234378|75234720:+","UN_COMTD1_LS0010","COMTD1","protein coding gene","no",2.06,0,0,0.003,32,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr10:75234225|75234426","intron_intersect_chr10:75234225|75234426"]
["chr10:76001229|76016643:-","chr10:75999815|76001229:-_chr10:76016643|76018878:-_chr10:76033398|76033640:-","UN_LRMDA_LS0025","LRMDA","protein coding gene","no",3.34,0,0,0.004,43,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr10:75883525|76036006","intron_intersect_chr10:75883525|76036006"]
["chr10:7675988|7676899:-","chr10:7675157|7675988:-_chr10:7676899|7677025:-_chr10:7679343|7679455:-_chr10:7691749|7691820:-_chr10:7693315|7693519:-","UN_ITIH5_UP_LS0001","ITIH5","protein coding gene","no",4.67,0,0,0.003,27,0,0,"0(0)","CHOL","no","NA","NA","NA","NA"]
["chr10:78232650|78232926:+","chr10:78179118|78179246:+_chr10:78232558|78232650:+_chr10:78232926|78233253:+_chr10:78233527|78233734:+","UN_LINC00856_LS0024","LINC00856","lncRNA gene","no",2.95,0,0,0.02,195,0,0,"0(0)","GBM;LGG;THCA","no","TE_intersect_:78232553|chr10|78232553|78232734|L2c:L2:LINE|315|+","TE_intersect_:78232862|chr10|78232862|78232992|MIRb:MIR:SINE|312|+","NA","NA"]
["chr10:79946662|79949455:-","chr10:79937740|79938228:-_chr10:79940705|79940788:-_chr10:79941398|79941514:-_chr10:79941954|79942070:-_chr10:79942388|79942504:-_chr10:79942763|79942879:-_chr10:79946461|79946662:-_chr10:79949455|79949515:-","UN_SFTPD_LS0008","SFTPD","protein coding gene","no",1.8,0,0,0.002,20,0,0,"0(0)","OV","no","TE_intersect_:79949284|chr10|79949284|79949493|MIRc:MIR:SINE|320|-","NA","intron_intersect_chr10:79949103|79950028","intron_intersect_chr10:79946662|79949066"]
["chr10:82037717|82051402:+","chr10:82037664|82037717:+_chr10:82051402|82058463:+","UN_NRG3_LS0011","NRG3","protein coding gene","no",1.9,0,0,0.004,34,0,0,"0(0)","GBM","no","TE_intersect_:82037630|chr10|82037630|82037837|MIRc:MIR:SINE|350|+","NA","intron_intersect_chr10:81889665|82050262","intron_intersect_chr10:82050348|82166727"]
["chr10:84252309|84252857:+","chr10:84248951|84252309:+_chr10:84252857|84253010:+_chr10:84254326|84254443:+_chr10:84257893|84263909:+","UN_RGR_LS0006","RGR","protein coding gene","yes",1.13,0,0,0.004,35,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr10:84250927|84252857","exon_intersect_chr10:84252857|84253010"]
["chr10:8869125|8883118:+","chr10:8868177|8869125:+_chr10:8883118|8889996:+","UN_AC044784.2_UP_LS0010","AC044784.2","lncRNA gene","no",4.77,0,0,0.012,115,0,0,"0(0)","BRCA;ESCA;TGCT","no","TE_intersect_:8868365|chr10|8868365|8869913|SVA_D:SVA:Retroposon|33|+","NA","NA","NA"]
["chr10:9039950|9065363:-","chr10:9037592|9039950:-_chr10:9065363|9065439:-_chr10:9176071|9176220:-_chr10:9196640|9196782:-","UN_RNA5SP299_UP_LS0024","RNA5SP299","no","no",1.99,0,0,0.005,50,0,0,"0(0)","BRCA","no","NA","NA","NA","NA"]
["chr10:91012971|91049470:-","chr10:90997490|90997828:-_chr10:91012914|91012971:-_chr10:91049470|91049605:-","UN_AL365434.2_UP_LS0004","AL365434.2","lncRNA gene","no",4.44,0,0,0.003,29,0,0,"0(0)","GBM","no","NA","TE_intersect_:91012750|chr10|91012750|91013257|MER1A:hAT-Charlie:DNA|95|-","intron_intersect_chr10:91048029|91053051","NA"]
["chr10:92025375|92026592:+","chr10:91923769|91924090:+_chr10:91935657|91935780:+_chr10:91939952|91940066:+_chr10:91942422|91942568:+_chr10:91945464|91945521:+_chr10:91951403|91951570:+_chr10:91953737|91953873:+_chr10:91956528|91956657:+_chr10:91957225|91957293:+_chr10:91959065|91959154:+_chr10:91959785|91959880:+_chr10:91959978|91960154:+_chr10:91962538|91962678:+_chr10:91964077|91964201:+_chr10:91966637|91966757:+_chr10:91980454|91980558:+_chr10:91981643|91981792:+_chr10:91982083|91982225:+_chr10:91982587|91982761:+_chr10:91984201|91984404:+_chr10:91989154|91989580:+_chr10:91992119|91992309:+_chr10:91993694|91993847:+_chr10:91994535|91994644:+_chr10:91996369|91996570:+_chr10:91997080|91997180:+_chr10:91997599|91997751:+_chr10:92008123|92008275:+_chr10:92008829|92008950:+_chr10:92009041|92009208:+_chr10:92011073|92011150:+_chr10:92011286|92011415:+_chr10:92013667|92013808:+_chr10:92013899|92014029:+_chr10:92016340|92016465:+_chr10:92018783|92018935:+_chr10:92024756|92024967:+_chr10:92025273|92025375:+_chr10:92026592|92026751:+_chr10:92027130|92027300:+_chr10:92028790|92030325:+","UN_BTAF1_LS0068","BTAF1","protein coding gene","no",1.62,0,0,0.006,53,0.001,1,"0(0)","TGCT","no","NA","NA","intron_intersect_chr10:92024967|92026592","exon_intersect_chr10:92026592|92026751"]
["chr10:94688274|94706824:+","chr10:94683775|94683987:+_chr10:94687770|94687932:+_chr10:94688125|94688274:+_chr10:94706824|94706960:+_chr10:94720396|94720537:+_chr10:94724346|94724533:+_chr10:94728556|94728653:+","UN_AL583836.1_LS0002","AL583836.1","protein coding gene","no",3.75,0,0,0.001,13,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr10:94688274|94694917","exon_intersect_chr10:94706784|94706960"]
["chr10:95873537|95876529:+","chr10:95823238|95823364:+_chr10:95839691|95839808:+_chr10:95842344|95842494:+_chr10:95844476|95844635:+_chr10:95845357|95845596:+_chr10:95847446|95847706:+_chr10:95860469|95860582:+_chr10:95864724|95864861:+_chr10:95866177|95867876:+_chr10:95870818|95873537:+_chr10:95876529|95877266:+","UN_AL365273.2_LS0010","AL365273.2","protein coding gene","no",1.16,0,0,0.004,42,0,0,"0(0)","THCA","no","NA","NA","exon_intersect_chr10:95866177|95877266","exon_intersect_chr10:95876518|95876660"]
["chr10:96941038|96941157:-","chr10:96940304|96941038:-_chr10:96941157|96941205:-_chr10:96941507|96942281:-","UN_LCOR_LS0038","LCOR","protein coding gene","no",1.02,0,0,0.003,30,0,0,"0(0)","ESCA","no","TE_intersect_:96940334|chr10|96940334|96942480|SVA_E:SVA:Retroposon|102|-","TE_intersect_:96940334|chr10|96940334|96942480|SVA_E:SVA:Retroposon|102|-","intron_intersect_chr10:96915902|96944113","intron_intersect_chr10:96915902|96944113"]
["chr10:97566934|97567914:+","chr10:97566783|97566934:+_chr10:97567914|97568141:+_chr10:97570138|97571209:+","UN_UBTD1_LS0044","UBTD1","protein coding gene","no",6.9,0,0,0.008,80,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr10:97499273|97567914","exon_intersect_chr10:97567914|97568141"]
["chr10:98137226|98156093:+","chr10:98137081|98137226:+_chr10:98156093|98156147:+_chr10:98157463|98157573:+_chr10:98162883|98162975:+_chr10:98163293|98163397:+_chr10:98174449|98174766:+_chr10:98186467|98186563:+_chr10:98208101|98209899:+_chr10:98231512|98231687:+_chr10:98234446|98234516:+_chr10:98235425|98235520:+_chr10:98236024|98236164:+_chr10:98244091|98244894:+","UN_R3HCC1L_LS0029","R3HCC1L","protein coding gene","no",1.14,0,0,0.003,26,0,0,"0(0)","UVM","no","TE_intersect_:98137222|chr10|98137222|98137273|Tigger4b:TcMar-Tigger:DNA|131|-","TE_intersect_:98156070|chr10|98156070|98156278|HAL1:L1:LINE|286|-","intron_intersect_chr10:98134706|98156093","exon_intersect_chr10:98156093|98156147"]
["chr10:99840957|99841967:+","chr10:99840150|99840957:+_chr10:99841967|99842093:+_chr10:99843799|99843900:+_chr10:99844322|99844465:+_chr10:99845624|99845782:+_chr10:99846961|99847127:+_chr10:99850602|99850796:+_chr10:99851502|99853617:+","UN_ABCC2_LS0049","ABCC2","protein coding gene","no",1.65,0,0,0.002,17,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr10:99836290|99841967","exon_intersect_chr10:99841967|99842093"]
["chr11:1017878|1018386:-","chr11:1012808|1013633:-_chr11:1013899|1014001:-_chr11:1015762|1016641:-_chr11:1017149|1017878:-_chr11:1018386|1018770:-_chr11:1019275|1019496:-_chr11:1020090|1020257:-_chr11:1020684|1020734:-_chr11:1021215|1021277:-_chr11:1023509|1023652:-_chr11:1023947|1024103:-_chr11:1024844|1025083:-_chr11:1025182|1025367:-_chr11:1025805|1025915:-_chr11:1026000|1026141:-_chr11:1026327|1026478:-_chr11:1026941|1027050:-_chr11:1027141|1027193:-_chr11:1027268|1027517:-_chr11:1027685|1027817:-_chr11:1027965|1028059:-_chr11:1028226|1028387:-_chr11:1028646|1028783:-_chr11:1028889|1028961:-_chr11:1029046|1029150:-_chr11:1029228|1029366:-_chr11:1029495|1029615:-_chr11:1030213|1030335:-_chr11:1030573|1031056:-_chr11:1031169|1031259:-_chr11:1031607|1031733:-_chr11:1031813|1032461:-","UN_MUC6_LS0138","MUC6","protein coding gene","no",52,0,0,0.003,27,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr11:1015762|1018770","exon_intersect_chr11:1015762|1018770"]
["chr11:10393281|10509475:+","chr11:10393262|10393281:+_chr11:10509475|10509805:+","UN_MRVI1-AS1_UP_LS0006","MRVI1-AS1","lncRNA gene","no",4.62,0,0,0.011,110,0,0,"0(0)","COAD;UCEC","no","NA","NA","intron_intersect_chr11:10392405|10399192","NA"]
["chr11:105496245|105515482:-","chr11:105494058|105494653:-_chr11:105496186|105496245:-_chr11:105515482|105515985:-","UN_CARD18_LS0018","CARD18","protein coding gene","no",2.25,0,0,0.009,89,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr11:105352956|105531602","intron_intersect_chr11:105352956|105531602"]
["chr11:107912629|107916541:+","chr11:107911748|107912629:+_chr11:107916541|107916870:+","UN_SLC35F2_LS0040","SLC35F2","protein coding gene","no",2.81,0,0,0.03,291,0,0,"0(0)","ESCA;HNSC;LUSC;TGCT","no","TE_intersect_:107911770|chr11|107911770|107913485|SVA_F:SVA:Retroposon|48|+","TE_intersect_:107916418|chr11|107916418|107917213|LTR1A1:ERV1:LTR|119|+","intron_intersect_chr11:107908764|107928167","intron_intersect_chr11:107908764|107928167"]
["chr11:110328523|110366361:+","chr11:110328388|110328523:+_chr11:110366361|110366534:+_chr11:110381926|110382021:+_chr11:110406244|110407612:+","UN_FDX1_UP_LS0001","FDX1","protein coding gene","no",2.3,0,0,0.01,97,0,0,"0(0)","OV;THYM;UCS","no","TE_intersect_:110328386|chr11|110328386|110329125|LTR17:ERV1:LTR|122|-","NA","NA","exon_intersect_chr11:110366361|110366534"]
["chr11:112637435|112661263:+","chr11:112637332|112637435:+_chr11:112661263|112661646:+_chr11:112720219|112720341:+_chr11:112761180|112761373:+","UN_AP003100.2_LS0001","AP003100.2","lncRNA gene","no",2.05,0,0,0.004,38,0,0,"0(0)","LGG","no","NA","NA","NA","NA"]
["chr11:112762469|112795442:+","chr11:112762070|112762469:+_chr11:112795442|112804890:+","UN_NCAM1_UP_LS0001","NCAM1","protein coding gene","no",2.49,0,0,0.004,38,0,0,"0(0)","KIRC","no","NA","TE_intersect_:112795351|chr11|112795351|112795559|MIRc:MIR:SINE|309|+","NA","exon_intersect_chr11:112795442|112795854"]
["chr11:113648682|113689765:-","chr11:113647749|113648682:-_chr11:113689765|113690120:-","UN_DRD2_UP_LS0039","DRD2","protein coding gene","no",1.71,0,0,0.006,53,0,0,"0(0)","OV","no","NA","TE_intersect_:113648323|chr11|113648323|113649870|LTR12C:ERV1:LTR|117|-","exon_intersect_chr11:113689765|113689917","NA"]
["chr11:115240420|115256218:-","chr11:115176467|115176592:-_chr11:115178644|115178775:-_chr11:115198406|115198438:-_chr11:115209574|115209657:-_chr11:115214608|115214780:-_chr11:115217892|115217991:-_chr11:115229113|115229271:-_chr11:115231353|115231490:-_chr11:115238500|115238652:-_chr11:115240274|115240420:-_chr11:115256218|115256290:-","UN_CADM1_LS0014","CADM1","protein coding gene","yes",1.5,0,0,0.001,11,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr11:115240980|115256832","exon_intersect_chr11:115240274|115240422"]
["chr11:116412039|116412861:+","chr11:116391240|116391366:+_chr11:116409795|116409918:+_chr11:116411924|116412039:+_chr11:116412861|116413127:+","UN_AP000770.1_UP_LS0013","AP000770.1","lncRNA gene","no",7.97,0,0,0.005,47,0,0,"0(0)","PCPG","no","TE_intersect_:116411935|chr11|116411935|116412220|AluJo:Alu:SINE|137|+","TE_intersect_:116412545|chr11|116412545|116413151|MER92B:ERV1:LTR|186|+","NA","NA"]
["chr11:117479902|117480443:-","chr11:117479332|117479902:-_chr11:117480443|117480571:-_chr11:117481174|117481270:-_chr11:117481963|117482162:-_chr11:117488814|117489052:-","UN_DSCAML1_LS0018","DSCAML1","protein coding gene","no",2.25,0,0,0.001,11,0,0,"0(0)","DLBC","no","NA","TE_intersect_:117479649|chr11|117479649|117479946|AluSx:Alu:SINE|111|-","exon_intersect_chr11:117480443|117480571","intron_intersect_chr11:117472036|117480443"]
["chr11:118342683|118344236:-","chr11:118339094|118339227:-_chr11:118339451|118339494:-_chr11:118339775|118339906:-_chr11:118340375|118340593:-_chr11:118342553|118342683:-_chr11:118344236|118344300:-","UN_AP001582.1_UP_LS0024","AP001582.1","pseudogene","no",5.11,0,0,0.002,19,0,0,"0(0)","THYM","no","NA","NA","NA","exon_intersect_chr11:118342553|118342744"]
["chr11:119044494|119044592:+","chr11:119044309|119044494:+_chr11:119044592|119044745:+_chr11:119045385|119045587:+","UN_HYOU1_LS0022","HYOU1","protein coding gene","no",4.85,0.1,0,0.002,22,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr11:119044189|119045654","exon_intersect_chr11:119044189|119045654"]
["chr11:119101252|119101521:+","chr11:119101084|119101252:+_chr11:119101521|119101647:+_chr11:119101724|119101860:+","UN_DPAGT1_LS0020","DPAGT1","protein coding gene","no",1.16,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:119100262|119102371","exon_intersect_chr11:119100262|119102371"]
["chr11:119419000|119420051:-","chr11:119417950|119418467:-_chr11:119418695|119419000:-_chr11:119420051|119420386:-_chr11:119420869|119420929:-_chr11:119423113|119423172:-","UN_THY1_LS0075","THY1","protein coding gene","yes",9.08,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:119417378|119421246","exon_intersect_chr11:119417378|119421246"]
["chr11:120836844|120855092:+","chr11:120564486|120564725:+_chr11:120653685|120653792:+_chr11:120660269|120660400:+_chr11:120802693|120802857:+_chr11:120815378|120815475:+_chr11:120819755|120819920:+_chr11:120831852|120832030:+_chr11:120836791|120836844:+_chr11:120855092|120856148:+_chr11:120861959|120862120:+_chr11:120874066|120874218:+_chr11:120875139|120875243:+_chr11:120898532|120898639:+_chr11:120905290|120905493:+_chr11:120940347|120940460:+_chr11:120952855|120952964:+_chr11:120956780|120956953:+_chr11:120960909|120961074:+_chr11:120962456|120962681:+_chr11:120967195|120967323:+_chr11:120982106|120982224:+_chr11:120985904|120987261:+","UN_GRIK4_LS0057","GRIK4","protein coding gene","no",1.83,0,0,0.004,43,0,0,"0(0)","GBM","no","NA","TE_intersect_:120855040|chr11|120855040|120855179|L2b:L2:LINE|296|-","intron_intersect_chr11:120836844|120858240","intron_intersect_chr11:120836844|120858240"]
["chr11:122394648|122394942:+","chr11:122394530|122394648:+_chr11:122394942|122395122:+_chr11:122403849|122403968:+_chr11:122418165|122418449:+","UN_MIR100HG_LS0074","MIR100HG","lncRNA gene","yes",2.05,0,0,0.01,100,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr11:122367973|122422692","intron_intersect_chr11:122367973|122422692"]
["chr11:123059708|123059774:+","chr11:122931302|122931321:+_chr11:123059485|123059708:+_chr11:123059774|123059961:+","UN_HSPA8_LS0094","HSPA8","protein coding gene","no",27.14,0,0,0.004,42,0,0,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chr11:123058252|123060426","exon_intersect_chr11:123058252|123060426"]
["chr11:126294602|126304188:-","chr11:126294298|126294602:-_chr11:126304188|126304318:-","UN_AP001318.2_LS0002","AP001318.2","lncRNA gene","no",2.75,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:126303752|126304281","exon_intersect_chr11:126294298|126294656"]
["chr11:126579270|126652781:+","chr11:126578302|126579270:+_chr11:126652781|126652929:+_chr11:126681783|126682103:+","UN_KIRREL3_LS0051","KIRREL3","protein coding gene","no",3.82,0,0,0.005,48,0,0,"0(0)","BRCA","no","NA","NA","intron_intersect_chr11:126562917|126610661","intron_intersect_chr11:126610948|126652852"]
["chr11:128290792|128293112:+","chr11:128290273|128290792:+_chr11:128293112|128293888:+","UN_MIR6090_UP_LS0005","MIR6090","small non-coding RNA gene","no",1.81,0,0,0.003,32,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr11:12930510|12965108:-","chr11:12930325|12930510:-_chr11:12965108|12965214:-_chr11:12979317|12980909:-_chr11:12989456|12989533:-","UN_AC013549.1_UP_LS0002","AC013549.1","lncRNA gene","no",4.3,0,0,0.025,236,0,0,"0(0)","BLCA;KIRC;KIRP;THCA;UCEC;UCS","no","TE_intersect_:12965035|chr11|12965035|12965240|AluJr:Alu:SINE|151|+","NA","exon_intersect_chr11:12965108|12965214","intron_intersect_chr11:12930326|12937109"]
["chr11:13051912|13056350:+","chr11:13051362|13051912:+_chr11:13056350|13059139:+","UN_AC022878.1_UP_LS0009","AC022878.1","pseudogene","no",2.65,0,0,0.006,53,0,0,"0(0)","ESCA;HNSC","no","NA","TE_intersect_:13056309|chr11|13056309|13056611|AluJr:Alu:SINE|199|-","NA","intron_intersect_chr11:13055034|13134793"]
["chr11:131545403|131546550:-","chr11:131540789|131542322:-_chr11:131545246|131545403:-_chr11:131546550|131546660:-","UN_NTM_LS0013","NTM","protein coding gene","no",2.05,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","TE_intersect_:131545232|chr11|131545232|131545411|L1MEg:L1:LINE|261|-","intron_intersect_chr11:131540867|131546662","intron_intersect_chr11:131540867|131546662"]
["chr11:134036031|134037512:+","chr11:134032805|134032860:+_chr11:134035938|134036031:+_chr11:134037512|134037918:+_chr11:134039762|134041248:+","UN_AP000911.1_LS0003","AP000911.1","lncRNA gene","no",1.9,0,0,0.004,34,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr11:134035832|134036750","exon_intersect_chr11:134037109|134038975"]
["chr11:14265679|14265928:-","chr11:14265524|14265679:-_chr11:14265928|14266204:-","UN_SPON1_LS0031","SPON1","protein coding gene","no",3.68,0,0,0.003,25,0,0,"0(0)","OV","no","TE_intersect_:14265926|chr11|14265926|14265967|L3:CR1:LINE|268|-","NA","exon_intersect_chr11:14265524|14267884","exon_intersect_chr11:14265524|14267884"]
["chr11:15115003|15134771:+","chr11:15114938|15115003:+_chr11:15134771|15134940:+_chr11:15147893|15147945:+_chr11:15149130|15149230:+_chr11:15175741|15176086:+_chr11:15177111|15177163:+_chr11:15178324|15178447:+_chr11:15190701|15190814:+_chr11:15200824|15200949:+_chr11:15221477|15221648:+_chr11:15225650|15225828:+_chr11:15235602|15235668:+_chr11:15238919|15239074:+_chr11:15240447|15240523:+_chr11:15245912|15246526:+","UN_INSC_LS0003","INSC","protein coding gene","no",3.04,0.03,0,0.004,40,0.001,1,"0(0)","SKCM","no","NA","TE_intersect_:15134694|chr11|15134694|15134813|MLT1J2:ERVL-MaLR:LTR|269|-","intron_intersect_chr11:15115003|15149102","intron_intersect_chr11:15115003|15149102"]
["chr11:17381359|17381476:+","chr11:17351726|17352039:+_chr11:17356651|17357001:+_chr11:17367009|17367347:+_chr11:17368867|17368964:+_chr11:17372006|17381359:+_chr11:17381476|17383531:+","UN_AC124798.1_LS0001","AC124798.1","lncRNA gene","no",4.19,0,0,0.006,59,0,0,"0(0)","ESCA","no","NA","TE_intersect_:17381434|chr11|17381434|17382022|LTR101_Mam:ERVL:LTR|327|+","exon_intersect_chr11:17380649|17383531","exon_intersect_chr11:17380649|17383531"]
["chr11:17846761|17866791:-","chr11:17788052|17788413:-_chr11:17846585|17846761:-_chr11:17866791|17866864:-","UN_SERGEF_LS0012","SERGEF","protein coding gene","no",2.9,0,0,0.001,13,0,0,"0(0)","THYM","no","TE_intersect_:17866710|chr11|17866710|17867056|THE1B:ERVL-MaLR:LTR|106|-","TE_intersect_:17846640|chr11|17846640|17846835|MIRb:MIR:SINE|328|+","exon_intersect_chr11:17866791|17866864","intron_intersect_chr11:17846761|17863566"]
["chr11:1901770|1902590:+","chr11:1897032|1901770:+_chr11:1902590|1902724:+_chr11:1903104|1903256:+_chr11:1907832|1911156:+","LINC01150_LS002","LINC01150","lncRNA gene","no",3.02,0,0,0.006,58,0,0,"0(0)","LAML","yes","TE_intersect_:1901665|chr11|1901665|1901794|MER34C:ERV1:LTR|256|-","TE_intersect_:1902560|chr11|1902560|1902646|AluJo:Alu:SINE|152|-","NA","NA"]
["chr11:1995604|1996669:+","chr11:1995176|1995604:+_chr11:1996669|1997143:+_chr11:1997722|1997828:+","UN_H19_LS0037","H19","lncRNA gene","yes",8.46,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:1995163|1996191","exon_intersect_chr11:1996514|1997875"]
["chr11:2129403|2129506:+","chr11:2129112|2129403:+_chr11:2129506|2130120:+_chr11:2130194|2130586:+","UN_IGF2_LS0052","IGF2","protein coding gene","yes",267.91,2.82,0,0.006,59,0.007,5,"0(0)","PCPG;UCS","no","NA","NA","exon_intersect_chr11:2129112|2133223","exon_intersect_chr11:2129112|2133223"]
["chr11:2130171|2130328:-","chr11:2129121|2130171:-_chr11:2130328|2133223:-_chr11:2133517|2133665:-_chr11:2135367|2135529:-_chr11:2138229|2138974:-","UN_IGF2_LS0179","IGF2","protein coding gene","yes",840.71,0,0,0.003,28,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr11:2129112|2133223","exon_intersect_chr11:2129112|2133223"]
["chr11:2145637|2145784:+","chr11:2145116|2145637:+_chr11:2145784|2146527:+_chr11:2147318|2148885:+","UN_INS-IGF2_LS0090","INS-IGF2","protein coding gene","no",1.71,0,0,0.002,17,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr11:2141238|2146245","intron_intersect_chr11:2141238|2146245"]
["chr11:22257257|22262169:-","chr11:22255730|22257257:-_chr11:22262169|22262254:-_chr11:22281542|22281643:-_chr11:22283730|22283824:-_chr11:22301280|22301399:-_chr11:22305657|22305807:-_chr11:22307237|22307374:-_chr11:22317547|22318081:-","UN_ANO5_LS0043","ANO5","protein coding gene","no",3.06,0,0,0.007,65,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr11:22262169|22262256","intron_intersect_chr11:22255522|22257680"]
["chr11:22301399|22305657:-","chr11:22261209|22261636:-_chr11:22262169|22262254:-_chr11:22281542|22281643:-_chr11:22283730|22283824:-_chr11:22301280|22301399:-_chr11:22305657|22305807:-_chr11:22307237|22307374:-_chr11:22317547|22318089:-","UN_AC104009.1_LS0005","AC104009.1","lncRNA gene","no",5.9,0,0,0.017,166,0,0,"0(0)","OV;SKCM;UCS","no","NA","TE_intersect_:22300729|chr11|22300729|22302950|L1MC4a:L1:LINE|222|+","exon_intersect_chr11:22305657|22305807","intron_intersect_chr11:22283824|22305657"]
["chr11:26588999|26591271:-","chr11:26560762|26561225:-_chr11:26563116|26563265:-_chr11:26565165|26565896:-_chr11:26567052|26567139:-_chr11:26572041|26572106:-_chr11:26583126|26584483:-_chr11:26588788|26588999:-_chr11:26591271|26591959:-_chr11:26597119|26597509:-","UN_ANO3_LS0039","ANO3","protein coding gene","no",3.67,0,0,0.004,37,0,0,"0(0)","TGCT","no","TE_intersect_:26591219|chr11|26591219|26591499|HERV17-int:ERV1:LTR|43|-","NA","intron_intersect_chr11:26572233|26598365","intron_intersect_chr11:26572233|26598365"]
["chr11:283243|289907:-","chr11:283054|283243:-_chr11:289907|290166:-","UN_AC136475.10_UP_LS0014","AC136475.10","pseudogene","no",3.48,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","TE_intersect_:283131|chr11|283131|283308|MIR:MIR:SINE|322|+","exon_intersect_chr11:289559|290075","intron_intersect_chr11:282797|284230"]
["chr11:29336082|29378330:-","chr11:29335898|29336082:-_chr11:29378330|29378451:-_chr11:29505195|29505275:-","UN_AC090124.1_LS0001","AC090124.1","lncRNA gene","no",5.32,0,0,0.001,11,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr11:29350349|29391525","intron_intersect_chr11:29336082|29350230"]
["chr11:31307908|31321584:-","chr11:31305515|31305777:-_chr11:31306232|31306388:-_chr11:31307639|31307908:-_chr11:31321584|31321672:-","UN_DCDC1_LS0017","DCDC1","protein coding gene","no",1.89,0,0,0.005,48,0,0,"0(0)","ESCA","no","TE_intersect_:31315654|chr11|31315654|31321680|L1HS:L1:LINE|6|-","NA","intron_intersect_chr11:31314548|31328117","intron_intersect_chr11:31307908|31312683"]
["chr11:32392755|32396157:-","chr11:32387784|32389179:-_chr11:32391972|32392064:-_chr11:32392666|32392755:-_chr11:32396157|32396407:-_chr11:32399948|32400044:-_chr11:32416490|32416540:-_chr11:32417577|32417654:-_chr11:32427956|32428058:-_chr11:32428497|32428619:-_chr11:32434700|32435345:-","UN_WT1_LS0007","WT1","protein coding gene","yes",2.83,0,0,0.007,64,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr11:32392755|32396257","intron_intersect_chr11:32392755|32396257"]
["chr11:32836746|32837241:-","chr11:32836590|32836746:-_chr11:32837241|32837314:-_chr11:32838494|32838763:-","UN_PRRG4_LS0009","PRRG4","protein coding gene","no",3.48,0,0,0.024,233,0,0,"0(0)","CESC;ESCA;HNSC;LUSC","no","NA","NA","intron_intersect_chr11:32836821|32838882","exon_intersect_chr11:32836658|32836821"]
["chr11:34155036|34157942:+","chr11:34105592|34105792:+_chr11:34108211|34108333:+_chr11:34108742|34108833:+_chr11:34112052|34112223:+_chr11:34113716|34113838:+_chr11:34115823|34115884:+_chr11:34118180|34118294:+_chr11:34118396|34118503:+_chr11:34122459|34122592:+_chr11:34123762|34123855:+_chr11:34124302|34124400:+_chr11:34127463|34127599:+_chr11:34130813|34130937:+_chr11:34131381|34131531:+_chr11:34132125|34132221:+_chr11:34133026|34133142:+_chr11:34134319|34134420:+_chr11:34134512|34134586:+_chr11:34135175|34135291:+_chr11:34136642|34136775:+_chr11:34136978|34137026:+_chr11:34139191|34139287:+_chr11:34139385|34139495:+_chr11:34140400|34140572:+_chr11:34141089|34141208:+_chr11:34141719|34141817:+_chr11:34142275|34142348:+_chr11:34143445|34143528:+_chr11:34146084|34147011:+_chr11:34147543|34147666:+_chr11:34149046|34149553:+_chr11:34152983|34153062:+_chr11:34154921|34155036:+_chr11:34157942|34158099:+_chr11:34159051|34159904:+","UN_ABTB2_LS0004","ABTB2","protein coding gene","no",1.66,0,0,0.006,59,0,0,"0(0)","TGCT","no","TE_intersect_:34155019|chr11|34155019|34155121|MIRc:MIR:SINE|304|-","TE_intersect_:34157907|chr11|34157907|34158106|MIR:MIR:SINE|240|+","intron_intersect_chr11:34154769|34159296","intron_intersect_chr11:34154769|34159296"]
["chr11:35419007|35419908:-","chr11:35251206|35260965:-_chr11:35265527|35265758:-_chr11:35280867|35281001:-_chr11:35286757|35286951:-_chr11:35292287|35292520:-_chr11:35301519|35301645:-_chr11:35306074|35306242:-_chr11:35312198|35312448:-_chr11:35315023|35315175:-_chr11:35317377|35317516:-_chr11:35418950|35419007:-_chr11:35419908|35420026:-","SLC1A2_LS039","SLC1A2","protein coding gene","no",3.43,0,0,0.003,28,0,0,"0(0)","LGG","yes","NA","NA","exon_intersect_chr11:35419908|35420063","exon_intersect_chr11:35418950|35419249"]
["chr11:35767539|35913260:-","chr11:35767341|35767539:-_chr11:35913260|35913344:-_chr11:35918011|35918114:-_chr11:35918581|35918718:-","UN_AL135934.1_UP_LS0005","AL135934.1","lncRNA gene","no",3.99,0,0,0.005,45,0,0,"0(0)","GBM","no","TE_intersect_:35913002|chr11|35913002|35913287|L1MC5:L1:LINE|301|-","NA","NA","intron_intersect_chr11:35735445|35806358"]
["chr11:36273368|36274274:-","chr11:36272292|36272807:-_chr11:36273166|36273368:-_chr11:36274274|36274420:-_chr11:36274533|36274772:-_chr11:36276137|36276240:-_chr11:36277089|36277123:-_chr11:36278477|36278616:-_chr11:36280712|36280837:-_chr11:36289362|36289424:-","UN_COMMD9_LS0008","COMMD9","protein coding gene","no",3.66,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:36272292|36274772","exon_intersect_chr11:36272292|36274772"]
["chr11:381285|381669:+","chr11:376906|377327:+_chr11:379418|379701:+_chr11:379866|380019:+_chr11:380130|380202:+_chr11:380292|380445:+_chr11:380825|380951:+_chr11:381084|381285:+_chr11:381669|382109:+","UN_B4GALNT4_LS0030","B4GALNT4","protein coding gene","no",6.54,0,0,0.013,123,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr11:380951|381669","exon_intersect_chr11:381669|382116"]
["chr11:3827295|3827379:+","chr11:3827180|3827295:+_chr11:3827379|3827629:+_chr11:3827941|3828103:+","UN_RHOG_LS0018","RHOG","protein coding gene","no",0.71,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:3826978|3828206","exon_intersect_chr11:3826978|3828206"]
["chr11:43828440|43855890:+","chr11:43703285|43703387:+_chr11:43828336|43828440:+_chr11:43855890|43856610:+","UN_HSD17B12_LS0014","HSD17B12","protein coding gene","no",7.01,0,0,0.004,37,0,0,"0(0)","ESCA;GBM","no","NA","NA","intron_intersect_chr11:43816391|43829709","exon_intersect_chr11:43855144|43856617"]
["chr11:45577364|45578050:-","chr11:45569258|45570091:-_chr11:45577269|45577364:-_chr11:45578050|45578140:-_chr11:45578305|45578442:-","UN_AC103855.2_UP_LS0004","AC103855.2","lncRNA gene","no",2.63,0,0,0.007,70,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr11:46321033|46321286:-","chr11:46320774|46321033:-_chr11:46321286|46321301:-","UN_CREB3L1_LS0096","CREB3L1","protein coding gene","yes",1.88,0,0,0.004,35,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr11:46320710|46321422","exon_intersect_chr11:46320710|46321422"]
["chr11:47152619|47155176:+","chr11:47152326|47152619:+_chr11:47155176|47155261:+_chr11:47157023|47157218:+_chr11:47157813|47157922:+_chr11:47161127|47161190:+_chr11:47161464|47162247:+","UN_C11orf49_LS0029","C11orf49","protein coding gene","no",5.36,0,0,0.003,30,0,0,"0(0)","COAD","no","NA","NA","intron_intersect_chr11:47138037|47154395","exon_intersect_chr11:47155156|47155261"]
["chr11:48986366|48987456:-","chr11:48985719|48986366:-_chr11:48987456|48987553:-_chr11:48988417|48988439:-_chr11:48989141|48989371:-_chr11:48991090|48991170:-","TRIM53CP_LS001","TRIM53CP","pseudogene","no",5.45,0,0,0.008,75,0,0,"0(0)","TGCT","yes","NA","NA","intron_intersect_chr11:48986373|48987460","exon_intersect_chr11:48985871|48986373"]
["chr11:5270156|5345773:-","chr11:5269506|5269676:-_chr11:5269799|5270156:-_chr11:5345773|5345899:-_chr11:5346262|5346353:-_chr11:5346876|5346910:-_chr11:5505569|5505604:-","AC104389.4_LS007","AC104389.4","protein coding gene","no",5.53,0,0,0.014,137,0,0,"0(0)","LUSC","yes","NA","NA","exon_intersect_chr11:5345773|5345899","exon_intersect_chr11:5269799|5270158"]
["chr11:5709255|5937401:-","chr11:5663167|5665395:-_chr11:5665656|5665682:-_chr11:5665981|5666081:-_chr11:5667689|5667711:-_chr11:5678204|5678434:-_chr11:5679074|5679169:-_chr11:5679761|5680238:-_chr11:5709135|5709255:-_chr11:5937401|5937502:-_chr11:5938065|5938126:-","UN_TRIM5_LS0032","TRIM5","protein coding gene","no",3.36,0,0,0.005,49,0,0,"0(0)","TGCT","no","TE_intersect_:5935247|chr11|5935247|5937929|HERV-Fc1-int:ERV1:LTR|35|+","NA","exon_intersect_chr11:5937401|5937505","exon_intersect_chr11:5709053|5710863"]
["chr11:57791701|57794010:+","chr11:57791559|57791701:+_chr11:57794010|57794081:+_chr11:57795577|57795729:+_chr11:57796457|57796992:+_chr11:57801733|57802124:+","UN_CTNND1_LS0026","CTNND1","protein coding gene","yes",11.93,0,0,0.011,106,0,0,"0(0)","CESC","no","NA","NA","intron_intersect_chr11:57791673|57793160","exon_intersect_chr11:57794010|57794081"]
["chr11:59022142|59044020:-","chr11:59018745|59018907:-_chr11:59022020|59022142:-_chr11:59044020|59044112:-_chr11:59051260|59051308:-_chr11:59053457|59053626:-_chr11:59055295|59055446:-_chr11:59058198|59058450:-","UN_AP001636.3_LS0015","AP001636.3","lncRNA gene","no",1.43,0,0,0.006,61,0,0,"0(0)","PRAD","no","TE_intersect_:59043997|chr11|59043997|59044294|AluJr:Alu:SINE|179|+","TE_intersect_:59021859|chr11|59021859|59022177|AluSz:Alu:SINE|145|+","intron_intersect_chr11:59043607|59049717","intron_intersect_chr11:58999689|59042737"]
["chr11:59666964|59667045:-","chr11:59636716|59638411:-_chr11:59639048|59639197:-_chr11:59639292|59639383:-_chr11:59642880|59643035:-_chr11:59647754|59647913:-_chr11:59649462|59649610:-_chr11:59650754|59650813:-_chr11:59651544|59651641:-_chr11:59652464|59652587:-_chr11:59652838|59653018:-_chr11:59653983|59654072:-_chr11:59655523|59655740:-_chr11:59656499|59656600:-_chr11:59657530|59657724:-_chr11:59658866|59658946:-_chr11:59659252|59659469:-_chr11:59666853|59666964:-_chr11:59667045|59667657:-","UN_PATL1_LS0050","PATL1","protein coding gene","no",1.67,0,0,0.009,91,0,0,"0(0)","MESO;OV;STAD","no","NA","NA","intron_intersect_chr11:59666964|59668881","intron_intersect_chr11:59666964|59668881"]
["chr11:61030395|61073462:-","chr11:61028866|61030395:-_chr11:61073462|61073579:-_chr11:61092297|61092413:-","UN_RNU6-933P_UP_LS0015","RNU6-933P","small non-coding RNA gene","no",1.58,0,0,0.002,21,0,0,"0(0)","DLBC","no","TE_intersect_:61073304|chr11|61073304|61073614|AluSz:Alu:SINE|129|+","NA","NA","NA"]
["chr11:61769314|61770485:+","chr11:61752584|61752790:+_chr11:61765625|61765712:+_chr11:61765958|61766221:+_chr11:61769260|61769314:+_chr11:61770485|61770525:+_chr11:61771500|61771750:+_chr11:61771829|61771952:+_chr11:61773967|61774162:+_chr11:61776056|61776132:+_chr11:61776322|61776432:+_chr11:61776787|61776877:+_chr11:61777264|61777464:+_chr11:61777734|61777845:+_chr11:61778380|61778489:+_chr11:61779263|61779423:+_chr11:61779498|61779570:+_chr11:61779842|61779930:+_chr11:61780222|61780290:+_chr11:61780960|61781045:+_chr11:61781138|61781329:+_chr11:61781573|61781824:+_chr11:61783513|61783600:+_chr11:61783851|61783925:+_chr11:61784280|61784385:+_chr11:61785800|61785874:+_chr11:61786063|61788519:+","UN_TMEM258_LS0007","TMEM258","protein coding gene","no",3.2,0,0,0.004,36,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr11:61769260|61769321","exon_intersect_chr11:61770246|61770525"]
["chr11:6217710|6217878:-","chr11:6211345|6211867:-_chr11:6214411|6214573:-_chr11:6214733|6217710:-_chr11:6217878|6218150:-_chr11:6218600|6218763:-_chr11:6218971|6219050:-_chr11:6222442|6222609:-_chr11:6222811|6222897:-_chr11:6223080|6223238:-_chr11:6223610|6224248:-_chr11:6224379|6224707:-_chr11:6234544|6234616:-","UN_FAM160A2_LS0027","FAM160A2","protein coding gene","no",5.23,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:6216570|6218150","exon_intersect_chr11:6216570|6218150"]
["chr11:62567472|62570993:+","chr11:62567373|62567472:+_chr11:62570993|62571110:+","UN_AP002990.1_LS0111","AP002990.1","protein coding gene","no",46.42,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:62567399|62567528","exon_intersect_chr11:62570965|62571108"]
["chr11:62909615|62910283:+","chr11:62909546|62909615:+_chr11:62910283|62910346:+_chr11:62910603|62910845:+_chr11:62917923|62918361:+","UN_CHRM1_LS0002","CHRM1","protein coding gene","no",2.25,0,0,0.003,26,0,0,"0(0)","PRAD","no","NA","NA","exon_intersect_chr11:62908679|62911178","exon_intersect_chr11:62908679|62911178"]
["chr11:64118777|64151239:-","chr11:64118272|64118777:-_chr11:64151239|64151355:-_chr11:64152292|64152393:-_chr11:64165697|64166057:-","UN_MACROD1_LS0056","MACROD1","protein coding gene","yes",3.68,0,0,0.011,110,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr11:64151239|64151355","exon_intersect_chr11:64116219|64119173"]
["chr11:64488951|64490027:-","chr11:64483850|64484295:-_chr11:64485696|64488951:-_chr11:64490027|64490222:-_chr11:64490300|64491330:-","UN_AP003774.3_UP_LS0012","AP003774.3","lncRNA gene","no",6.07,0,0,0.005,48,0,0,"0(0)","LAML","no","NA","TE_intersect_:64488672|chr11|64488672|64488978|AluSx:Alu:SINE|108|+","NA","NA"]
["chr11:64552492|64552998:-","chr11:64552240|64552492:-_chr11:64552998|64553091:-_chr11:64560177|64560375:-","UN_AP003774.3_UP_LS0027","AP003774.3","lncRNA gene","no",4.58,0,0,0.005,45,0,0,"0(0)","LIHC","no","TE_intersect_:64552903|chr11|64552903|64553020|MIRc:MIR:SINE|264|+","NA","NA","NA"]
["chr11:64854843|64855051:+","chr11:64853846|64854314:+_chr11:64854366|64854843:+_chr11:64855051|64855122:+_chr11:64855440|64855486:+","UN_EHD1_LS0075","EHD1","protein coding gene","no",0.86,0,0,0.002,20,0,0,"0(0)","DLBC","no","NA","TE_intersect_:64854973|chr11|64854973|64855102|MIRb:MIR:SINE|389|+","exon_intersect_chr11:64851642|64854857","exon_intersect_chr11:64855014|64856663"]
["chr11:65066879|65067422:-","chr11:65066306|65066473:-_chr11:65066552|65066679:-_chr11:65066813|65066879:-_chr11:65067422|65067486:-","UN_CDCA5_LS0005","CDCA5","protein coding gene","no",1.83,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr11:65066879|65067655","intron_intersect_chr11:65066879|65067655"]
["chr11:65228438|65233150:+","chr11:65213876|65214253:+_chr11:65214326|65214429:+_chr11:65217535|65217688:+_chr11:65220996|65221164:+_chr11:65222473|65222596:+_chr11:65223465|65223580:+_chr11:65228317|65228438:+_chr11:65233150|65233364:+_chr11:65236409|65236517:+_chr11:65236685|65236888:+_chr11:65238662|65239480:+_chr11:65241990|65242757:+","UN_SLC22A20P_LS0013","SLC22A20P","pseudogene","no",2.88,0,0,0.005,48,0,0,"0(0)","ESCA;OV","no","TE_intersect_:65228282|chr11|65228282|65228595|AluSz:Alu:SINE|142|-","NA","intron_intersect_chr11:65226040|65233150","exon_intersect_chr11:65233150|65233364"]
["chr11:65500239|65500278:-","chr11:65499504|65499665:-_chr11:65499766|65500239:-_chr11:65500278|65500426:-_chr11:65500483|65500819:-_chr11:65505167|65505296:-_chr11:65505440|65505609:-","UN_MALAT1_LS0055","MALAT1","lncRNA gene","yes",63.66,0,0,0.003,28,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr11:65497762|65506516","exon_intersect_chr11:65497762|65506516"]
["chr11:65856242|65858057:-","chr11:65855054|65855448:-_chr11:65855654|65855730:-_chr11:65855935|65856242:-_chr11:65858057|65858194:-","UN_CFL1_LS0024","CFL1","protein coding gene","no",263.66,0.45,0,0.01,97,0.006,4,"0(0)","GBM;THYM","no","NA","NA","intron_intersect_chr11:65857868|65858097","exon_intersect_chr11:65854675|65856473"]
["chr11:66291171|66291610:-","chr11:66290987|66291171:-_chr11:66291610|66291768:-","UN_YIF1A_UP_LS0002","YIF1A","protein coding gene","no",3.26,0,0,0.004,35,0,0,"0(0)","MESO;PCPG","no","TE_intersect_:66291607|chr11|66291607|66291745|MIR3:MIR:SINE|271|-","TE_intersect_:66291032|chr11|66291032|66291332|AluJb:Alu:SINE|190|-","NA","NA"]
["chr11:67070549|67071694:-","chr11:67070455|67070549:-_chr11:67071694|67071985:-","UN_RHOD_LS0011","RHOD","protein coding gene","no",0.85,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:67071435|67072013","exon_intersect_chr11:67070289|67070559"]
["chr11:67468261|67476981:+","chr11:67468198|67468261:+_chr11:67476981|67477297:+","UN_AIP_UP_LS0002","AIP","protein coding gene","yes",1.86,0,0,0.01,98,0,0,"0(0)","OV","no","NA","TE_intersect_:67475909|chr11|67475909|67477234|LTR12C:ERV1:LTR|62|+","intron_intersect_chr11:67468199|67469019","NA"]
["chr11:67873341|67936775:-","chr11:67845047|67847989:-_chr11:67873206|67873341:-_chr11:67936775|67936991:-_chr11:68213138|68213286:-","UN_FAM86C2P_UP_LS0022","FAM86C2P","pseudogene","no",3.19,0,0,0.003,33,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr11:67936775|67936991","exon_intersect_chr11:67873202|67873367"]
["chr11:68617677|68636097:-","chr11:68612899|68613221:-_chr11:68615882|68616019:-_chr11:68616189|68616286:-_chr11:68616475|68616904:-_chr11:68617559|68617677:-_chr11:68636097|68636940:-","UN_AP003096.1_UP_LS0004","AP003096.1","lncRNA gene","no",1.57,0,0,0.004,34,0,0,"0(0)","TGCT","no","TE_intersect_:68634172|chr11|68634172|68637122|HERVH-int:ERV1:LTR|97|+","TE_intersect_:68617398|chr11|68617398|68617697|AluSz6:Alu:SINE|137|+","NA","NA"]
["chr11:69309465|69316834:+","chr11:69294131|69294576:+_chr11:69309408|69309465:+_chr11:69316834|69316925:+_chr11:69341510|69341678:+_chr11:69366743|69372512:+","UN_MYEOV_LS0028","MYEOV","protein coding gene","no",2.63,0,0,0.004,41,0,0,"0(0)","SKCM","no","TE_intersect_:69309401|chr11|69309401|69309671|L2:L2:LINE|328|-","TE_intersect_:69316738|chr11|69316738|69316942|MIRb:MIR:SINE|261|+","intron_intersect_chr11:69303807|69316832","exon_intersect_chr11:69316832|69316925"]
["chr11:69825657|69826723:+","chr11:69825285|69825388:+_chr11:69825508|69825657:+_chr11:69826723|69826912:+_chr11:69827594|69828245:+","UN_AP003555.3_UP_LS0019","AP003555.3","lncRNA gene","no",9.87,0.03,0,0.011,101,0.001,1,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr11:70443889|70454159:+","chr11:70437597|70439097:+_chr11:70443589|70443889:+_chr11:70454159|70454559:+_chr11:70456785|70462495:+","UN_AP001271.2_UP_LS0005","AP001271.2","lncRNA gene","no",3.97,0,0,0.003,26,0,0,"0(0)","UCS","no","NA","TE_intersect_:70453975|chr11|70453975|70454273|AluJb:Alu:SINE|144|-","NA","NA"]
["chr11:71522986|71564565:+","chr11:71522776|71522986:+_chr11:71564565|71564667:+_chr11:71566407|71566738:+","UN_KRTAP5-10_UP_LS0008","KRTAP5-10","protein coding gene","no",2.09,0,0,0.005,51,0,0,"0(0)","THYM","no","NA","TE_intersect_:71564147|chr11|71564147|71564697|MSTB-int:ERVL-MaLR:LTR|173|+","intron_intersect_chr11:71521204|71523996","intron_intersect_chr11:71549553|71565563"]
["chr11:72115185|72119705:+","chr11:72114869|72114925:+_chr11:72115035|72115185:+_chr11:72119705|72121296:+","UN_FOLR3_LS0003","FOLR3","protein coding gene","no",2.97,0,0,0.01,93,0,0,"0(0)","HNSC","no","NA","NA","intron_intersect_chr11:72115185|72131282","intron_intersect_chr11:72115185|72131282"]
["chr11:72195730|72196199:-","chr11:72158910|72158945:-_chr11:72195383|72195730:-_chr11:72196199|72196338:-","UN_FOLR1_LS0042","FOLR1","protein coding gene","no",4,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:72195897|72196301","exon_intersect_chr11:72195612|72195747"]
["chr11:73185557|73185747:+","chr11:73185207|73185557:+_chr11:73185747|73185923:+_chr11:73186441|73186875:+","UN_P2RY2_UP_LS0004","P2RY2","protein coding gene","no",1.39,0,0,0.004,43,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr11:73975666|73976666:+","chr11:73975504|73975666:+_chr11:73976666|73976725:+","UN_UCP2_LS0053","UCP2","protein coding gene","no",9.07,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:73975491|73975671","exon_intersect_chr11:73976641|73976742"]
["chr11:75404177|75404771:-","chr11:75404018|75404177:-_chr11:75404771|75404868:-","UN_RPS3_LS0054","RPS3","protein coding gene","no",4.3,0,0,0.01,97,0,0,"0(0)","DLBC;ESCA","no","NA","NA","exon_intersect_chr11:75404672|75406913","exon_intersect_chr11:75404020|75404207"]
["chr11:75572468|75572498:-","chr11:75568936|75569165:-_chr11:75570237|75570242:-_chr11:75571782|75572468:-_chr11:75572498|75572718:-","UN_SERPINH1_LS0201","SERPINH1","protein coding gene","no",19.15,0,0,0.007,69,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:75571781|75572783","exon_intersect_chr11:75571781|75572783"]
["chr11:75892393|75911954:+","chr11:75876850|75880040:+_chr11:75888829|75888903:+_chr11:75892129|75892393:+_chr11:75911954|75912039:+_chr11:75961444|75961549:+_chr11:75983387|75983513:+_chr11:76004005|76004089:+_chr11:76007534|76007621:+_chr11:76008807|76008867:+_chr11:76016815|76016980:+_chr11:76065710|76065788:+_chr11:76115924|76116015:+_chr11:76140711|76142651:+","UN_UVRAG_LS0020","UVRAG","protein coding gene","yes",1.88,0,0,0.003,25,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr11:75888903|75911204","exon_intersect_chr11:75911954|75912039"]
["chr11:76554326|76555543:-","chr11:76553028|76554326:-_chr11:76555543|76555645:-_chr11:76582659|76583481:-","UN_AP002360.1_UP_LS0003","AP002360.1","lncRNA gene","no",1.82,0,0,0.004,39,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr11:77098112|77098291:-","chr11:77097411|77098112:-_chr11:77098291|77098564:-_chr11:77098742|77099736:-","UN_CAPN5_LS0018","CAPN5","protein coding gene","no",1.31,0,0,0.001,14,0,0,"0(0)","ESCA","no","TE_intersect_:77097489|chr11|77097489|77099708|SVA_F:SVA:Retroposon|69|-","TE_intersect_:77097489|chr11|77097489|77099708|SVA_F:SVA:Retroposon|69|-","intron_intersect_chr11:77093813|77102840","intron_intersect_chr11:77093813|77102840"]
["chr11:77269024|77271130:-","chr11:77216558|77217314:-_chr11:77224238|77224365:-_chr11:77227864|77227916:-_chr11:77229150|77229232:-_chr11:77233025|77233172:-_chr11:77245281|77245502:-_chr11:77258386|77258542:-_chr11:77268457|77268539:-_chr11:77268924|77269024:-_chr11:77271130|77271223:-_chr11:77271295|77271393:-_chr11:77285085|77285126:-","UN_GDPD4_LS0014","GDPD4","protein coding gene","no",3.93,0,0,0.003,30,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr11:77270920|77271223","exon_intersect_chr11:77268924|77269069"]
["chr11:78464014|78472252:+","chr11:78457798|78464014:+_chr11:78472252|78472458:+","UN_NARS2_LS0009","NARS2","protein coding gene","no",3.62,0,0,0.002,22,0,0,"0(0)","THYM","no","TE_intersect_:78463951|chr11|78463951|78465467|LTR12C:ERV1:LTR|56|-","NA","intron_intersect_chr11:78444049|78465876","intron_intersect_chr11:78469313|78478438"]
["chr11:80205751|80206891:+","chr11:80173670|80174359:+_chr11:80200668|80200770:+_chr11:80201358|80201583:+_chr11:80203186|80203395:+_chr11:80205538|80205751:+_chr11:80206891|80207209:+_chr11:80223759|80223900:+_chr11:80224906|80225957:+","UN_RNU6-544P_UP_LS0012","RNU6-544P","small non-coding RNA gene","no",5.21,0,0,0.003,29,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr11:822603|823834:-","chr11:822397|822603:-_chr11:823834|823863:-_chr11:824390|824655:-","UN_PNPLA2_LS0054","PNPLA2","protein coding gene","no",1.46,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr11:823634|823863","exon_intersect_chr11:821958|822606"]
["chr11:830713|831128:+","chr11:830485|830713:+_chr11:831128|831295:+_chr11:831535|831985:+","CRACR2B_LS024","CRACR2B","protein coding gene","no",4.1,0,0,0.037,351,0,0,"0(0)","BRCA;GBM;LUAD;OV;UCEC;UCS","yes","NA","NA","exon_intersect_chr11:828852|831295","exon_intersect_chr11:828852|831295"]
["chr11:85785369|85790603:+","chr11:85785172|85785369:+_chr11:85790603|85790879:+","UN_SYTL2_LS0042","SYTL2","protein coding gene","no",4.24,0,0,0.002,19,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr11:85758114|85810954","intron_intersect_chr11:85758114|85810954"]
["chr11:88505940|88506857:-","chr11:88503916|88505940:-_chr11:88506857|88510142:-","UN_GRM5_LS0001","GRM5","protein coding gene","no",3.19,0,0,0.005,46,0,0,"0(0)","CHOL;KIRP","no","NA","NA","exon_intersect_chr11:88504576|88509504","exon_intersect_chr11:88504576|88509504"]
["chr11:9021955|9022412:-","chr11:9020890|9021197:-_chr11:9021876|9021955:-_chr11:9022412|9022756:-_chr11:9023466|9024413:-_chr11:9025702|9025821:-","UN_SCUBE2_LS0006","SCUBE2","protein coding gene","yes",4.66,0,0,0.006,61,0,0,"0(0)","THYM","no","TE_intersect_:9022317|chr11|9022317|9022835|L2-3_Crp:L2:LINE|325|+","NA","intron_intersect_chr11:9022029|9022552","exon_intersect_chr11:9021876|9022029"]
["chr11:92982723|92984807:+","chr11:92930861|92931006:+_chr11:92960225|92960343:+_chr11:92965797|92965997:+_chr11:92966539|92966696:+_chr11:92969593|92969948:+_chr11:92977723|92977787:+_chr11:92981447|92982723:+_chr11:92984807|92988505:+","UN_MTNR1B_LS0008","MTNR1B","protein coding gene","no",3.79,0,0,0.007,63,0,0,"0(0)","LIHC","no","NA","NA","exon_intersect_chr11:92981447|92982782","exon_intersect_chr11:92984807|92985066"]
["chr11:95320871|95321050:-","chr11:95320217|95320871:-_chr11:95321050|95322384:-","UN_SESN3_UP_LS0010","SESN3","protein coding gene","no",2.36,0,0,0.002,16,0,0,"0(0)","ESCA","no","TE_intersect_:95320225|chr11|95320225|95322055|SVA_F:SVA:Retroposon|62|-","TE_intersect_:95320225|chr11|95320225|95322055|SVA_F:SVA:Retroposon|62|-","NA","NA"]
["chr11:96093517|96229757:-","chr11:95976598|95979963:-_chr11:95985531|95985642:-_chr11:95991520|95991723:-_chr11:96091892|96093517:-_chr11:96229757|96229838:-","UN_MAML2_LS0019","MAML2","protein coding gene","yes",1.74,0,0,0.002,20,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr11:96093520|96341383","exon_intersect_chr11:96091892|96093520"]
["chr11:97996634|98062305:-","chr11:97994873|97996634:-_chr11:98062305|98062474:-_chr11:98069817|98070066:-","UN_AP003730.2_UP_LS0006","AP003730.2","lncRNA gene","no",3.37,0,0,0.002,21,0,0,"0(0)","TGCT","no","TE_intersect_:98062125|chr11|98062125|98062392|L2:L2:LINE|296|+","NA","NA","NA"]
["chr12:101110291|101145863:-","chr12:101108697|101110291:-_chr12:101145863|101146425:-","UN_AC063947.1_UP_LS0004","AC063947.1","lncRNA gene","no",1.14,0,0,0.001,14,0,0,"0(0)","THYM","no","TE_intersect_:101145761|chr12|101145761|101146033|HERVH-int:ERV1:LTR|124|+","NA","NA","intron_intersect_chr12:101099720|101110404"]
["chr12:102515823|102690106:+","chr12:102515750|102515823:+_chr12:102690106|102690203:+_chr12:102707280|102707372:+_chr12:102853526|102853584:+_chr12:102879879|102879933:+_chr12:102904698|102905059:+","UN_ASCL1_UP_LS0005","ASCL1","protein coding gene","yes",3.28,0,0,0.006,57,0,0,"0(0)","PRAD","no","NA","NA","NA","NA"]
["chr12:103815121|103835892:-","chr12:103787466|103787527:-_chr12:103788838|103788919:-_chr12:103793164|103793265:-_chr12:103793410|103793512:-_chr12:103793937|103793997:-_chr12:103796894|103797031:-_chr12:103798587|103798677:-_chr12:103806322|103806377:-_chr12:103806855|103806929:-_chr12:103814937|103815121:-_chr12:103835892|103835970:-","UN_NT5DC3_LS0024","NT5DC3","protein coding gene","no",10.92,0,0,0.005,52,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:103835814|chr12|103835814|103836172|THE1A:ERVL-MaLR:LTR|82|-","NA","intron_intersect_chr12:103822085|103840949","intron_intersect_chr12:103815121|103819610"]
["chr12:104265411|104265606:-","chr12:104265270|104265411:-_chr12:104265606|104265912:-","UN_TXNRD1_LS0065","TXNRD1","protein coding gene","no",31.51,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr12:104265309|104265836","exon_intersect_chr12:104265309|104265836"]
["chr12:105399271|105399361:+","chr12:105399179|105399271:+_chr12:105399361|105399500:+_chr12:105410712|105412890:+","UN_CASC18_UP_LS0008","CASC18","lncRNA gene","no",1.34,0,0,0.005,48,0,0,"0(0)","KIRP","no","TE_intersect_:105399190|chr12|105399190|105399475|AluJb:Alu:SINE|140|-","TE_intersect_:105399190|chr12|105399190|105399475|AluJb:Alu:SINE|140|-","NA","NA"]
["chr12:106742084|106774690:-","chr12:106714924|106715572:-_chr12:106741997|106742084:-_chr12:106774690|106774808:-_chr12:106775174|106775341:-","UN_AC079385.1_LS0005","AC079385.1","lncRNA gene","no",1.75,0,0,0.006,57,0,0,"0(0)","CHOL;TGCT;THYM","no","NA","NA","exon_intersect_chr12:106774690|106774918","intron_intersect_chr12:106733506|106747437"]
["chr12:109098341|109098417:-","chr12:109098285|109098341:-_chr12:109098417|109098634:-","UN_UNG_LS0007","UNG","protein coding gene","no",0.76,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr12:109098118|109098638","exon_intersect_chr12:109098118|109098638"]
["chr12:110172086|110172576:+","chr12:110171902|110172086:+_chr12:110172576|110173031:+_chr12:110180422|110180571:+_chr12:110190920|110191048:+_chr12:110192617|110192706:+_chr12:110203864|110203950:+_chr12:110205443|110205514:+_chr12:110205595|110205680:+_chr12:110209171|110209216:+_chr12:110218044|110218560:+","UN_IFT81_LS0025","IFT81","protein coding gene","no",5.64,0,0,0.004,38,0,0,"0(0)","SKCM","no","NA","TE_intersect_:110172360|chr12|110172360|110173979|SVA_D:SVA:Retroposon|39|+","intron_intersect_chr12:110172086|110180422","intron_intersect_chr12:110172086|110180422"]
["chr12:110867054|110867634:-","chr12:110866348|110867054:-_chr12:110867634|110868798:-","UN_CCDC63_LS0005","CCDC63","protein coding gene","no",0.82,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:110866314|chr12|110866314|110868763|SVA_F:SVA:Retroposon|71|-","TE_intersect_:110866314|chr12|110866314|110868763|SVA_F:SVA:Retroposon|71|-","intron_intersect_chr12:110858775|110873842","intron_intersect_chr12:110858775|110873842"]
["chr12:112406802|112408240:-","chr12:112406299|112406342:-_chr12:112406747|112406802:-_chr12:112408240|112408338:-_chr12:112408420|112408656:-_chr12:112409411|112409574:-","RPL6_LS004","RPL6","protein coding gene","no",162.71,0,0,0.006,57,0,0,"0(0)","DLBC","yes","NA","NA","exon_intersect_chr12:112406294|112408952","exon_intersect_chr12:112406294|112408952"]
["chr12:113472009|113472670:-","chr12:113462034|113463557:-_chr12:113467256|113467421:-_chr12:113468127|113468404:-_chr12:113469122|113469345:-_chr12:113471326|113472009:-_chr12:113472670|113472894:-","UN_LHX5-AS1_LS0001","LHX5-AS1","lncRNA gene","no",1.42,0,0,0.007,67,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr12:113472280|113480183","exon_intersect_chr12:113471326|113472072"]
["chr12:114692743|114697171:+","chr12:114692526|114692743:+_chr12:114697171|114698093:+","UN_AC026765.2_UP_LS0010","AC026765.2","lncRNA gene","no",3.62,0,0,0.002,16,0,0,"0(0)","ACC","no","NA","NA","NA","NA"]
["chr12:116518318|116533966:+","chr12:116517858|116517890:+_chr12:116518258|116518318:+_chr12:116533966|116535521:+","UN_MAP1LC3B2_UP_LS0001","MAP1LC3B2","protein coding gene","no",4.03,0,0,0.004,41,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr12:116518258|116518820","exon_intersect_chr12:116533966|116535521"]
["chr12:117190283|117190361:+","chr12:117190223|117190283:+_chr12:117190361|117190505:+","UN_FBXO21_LS0047","FBXO21","protein coding gene","no",1.12,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr12:117190218|117190531","exon_intersect_chr12:117190218|117190531"]
["chr12:117984237|117988784:+","chr12:117981602|117981708:+_chr12:117982090|117982207:+_chr12:117983947|117984237:+_chr12:117988784|117988897:+_chr12:117991761|117991921:+","UN_RFC5_UP_LS0005","RFC5","protein coding gene","no",4.46,0,0,0.018,168,0,0,"0(0)","DLBC;ESCA;HNSC;LUSC;UCS","no","NA","TE_intersect_:117988484|chr12|117988484|117988934|MSTA:ERVL-MaLR:LTR|135|+","NA","NA"]
["chr12:120214213|120214825:-","chr12:120210442|120212580:-_chr12:120213842|120213990:-_chr12:120214136|120214213:-_chr12:120214825|120214998:-_chr12:120215103|120215417:-_chr12:120221623|120221758:-_chr12:120222549|120222750:-_chr12:120222863|120222999:-_chr12:120223718|120223833:-_chr12:120224151|120224377:-_chr12:120226153|120227060:-","UN_PXN_LS0025","PXN","protein coding gene","no",7.81,0,0,0.005,46,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr12:120214825|120214998","exon_intersect_chr12:120214136|120214217"]
["chr12:121441233|121441636:-","chr12:121424364|121430163:-_chr12:121430342|121430469:-_chr12:121439857|121440075:-_chr12:121440816|121440977:-_chr12:121441070|121441233:-_chr12:121441636|121442836:-_chr12:121442992|121443030:-_chr12:121443278|121443793:-_chr12:121444012|121444272:-_chr12:121444450|121444536:-_chr12:121445275|121445418:-_chr12:121453120|121453344:-_chr12:121494579|121494665:-_chr12:121509567|121510039:-_chr12:121513276|121513402:-_chr12:121520985|121521100:-_chr12:121532806|121532959:-_chr12:121534497|121534590:-_chr12:121548877|121548983:-_chr12:121549460|121549638:-_chr12:121574547|121574593:-_chr12:121575781|121575859:-_chr12:121578802|121578946:-_chr12:121580020|121580140:-","UN_KDM2B_LS0023","KDM2B","protein coding gene","no",4.09,0.06,0,0.003,25,0.001,1,"0(0)","LAML","no","TE_intersect_:121441453|chr12|121441453|121441725|AluSz:Alu:SINE|96|-","NA","intron_intersect_chr12:121441244|121442157","exon_intersect_chr12:121441070|121441244"]
["chr12:122035427|122035509:+","chr12:122018800|122022183:+_chr12:122030700|122030781:+_chr12:122035331|122035427:+_chr12:122035509|122036782:+","UN_BCL7A_LS0013","BCL7A","protein coding gene","no",1.68,0.02,0,0.001,14,0.001,1,"0(0)","DLBC","no","NA","NA","intron_intersect_chr12:122035427|122043886","intron_intersect_chr12:122035427|122043886"]
["chr12:123303825|123304582:-","chr12:123289109|123296050:-_chr12:123297978|123298171:-_chr12:123302824|123303825:-_chr12:123304582|123304719:-_chr12:123309310|123309402:-_chr12:123309489|123309583:-_chr12:123309710|123309856:-_chr12:123311055|123311129:-_chr12:123313620|123313719:-_chr12:123315373|123315444:-_chr12:123315548|123315660:-_chr12:123317221|123317356:-_chr12:123319900|123320031:-_chr12:123320432|123320607:-_chr12:123320699|123320866:-_chr12:123321535|123322660:-","UN_SBNO1_LS0014","SBNO1","protein coding gene","no",1.36,0,0,0.003,25,0,0,"0(0)","LAML","no","NA","TE_intersect_:123303712|chr12|123303712|123303848|FLAM_C:Alu:SINE|176|+","exon_intersect_chr12:123304582|123304719","intron_intersect_chr12:123302900|123304582"]
["chr12:124180934|124198805:+","chr12:124180399|124180934:+_chr12:124198805|124200894:+","UN_RFLNA_LS0038","RFLNA","protein coding gene","no",2,0,0,0.007,69,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr12:124149791|124206228","intron_intersect_chr12:124149791|124206228"]
["chr12:124512502|124535565:-","chr12:124511906|124512502:-_chr12:124535565|124535611:-_chr12:124567308|124567464:-","UN_NCOR2_LS0301","NCOR2","protein coding gene","no",1.62,0,0,0.008,76,0,0,"0(0)","TGCT","no","NA","TE_intersect_:124512211|chr12|124512211|124512598|MLT1C:ERVL-MaLR:LTR|254|-","exon_intersect_chr12:124535565|124535611","intron_intersect_chr12:124495368|124513222"]
["chr12:126034009|126038174:-","chr12:126014391|126016221:-_chr12:126016677|126016891:-_chr12:126030466|126030529:-_chr12:126033982|126034009:-_chr12:126038174|126038282:-_chr12:126049455|126049583:-","UN_AC005186.1_LS0027","AC005186.1","lncRNA gene","no",5.02,0,0,0.002,21,0,0,"0(0)","CHOL","no","TE_intersect_:126037811|chr12|126037811|126038175|THE1B:ERVL-MaLR:LTR|113|-","TE_intersect_:126033772|chr12|126033772|126034227|LTR22A:ERVK:LTR|77|+","intron_intersect_chr12:126033295|126042439","intron_intersect_chr12:126033295|126042439"]
["chr12:12697897|12700000:+","chr12:12697035|12697897:+_chr12:12700000|12700017:+","UN_CDKN1B_UP_LS0002","CDKN1B","protein coding gene","yes",2.17,0,0,0.01,94,0,0,"0(0)","ESCA;OV;STAD","no","NA","TE_intersect_:12699979|chr12|12699979|12700112|FLAM_C:Alu:SINE|165|-","NA","NA"]
["chr12:128815070|128823231:-","chr12:128793194|128794356:-_chr12:128799259|128799417:-_chr12:128800854|128801009:-_chr12:128808788|128808956:-_chr12:128809396|128809473:-_chr12:128809943|128810111:-_chr12:128814775|128815070:-_chr12:128823231|128823258:-","UN_SLC15A4_LS0015","SLC15A4","protein coding gene","no",1.92,0,0,0.013,125,0,0,"0(0)","KIRC;OV;PAAD","no","NA","NA","intron_intersect_chr12:128819867|128823398","exon_intersect_chr12:128814775|128815928"]
["chr12:12913225|12913340:-","chr12:12912422|12912469:-_chr12:12912662|12913072:-_chr12:12913152|12913225:-_chr12:12913340|12913387:-_chr12:12913511|12913679:-_chr12:12913861|12913875:-","UN_GPRC5A_LS0093","GPRC5A","protein coding gene","yes",10.04,0,0,0.003,33,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr12:12912084|12917937","exon_intersect_chr12:12912084|12917937"]
["chr12:130086138|130086483:+","chr12:130085853|130086138:+_chr12:130086483|130088151:+_chr12:130105495|130107043:+","UN_AC026336.3_UP_LS0001","AC026336.3","lncRNA gene","no",0.9,0,0,0.003,33,0,0,"0(0)","READ","no","NA","NA","NA","NA"]
["chr12:131238238|131238744:-","chr12:131232412|131235074:-_chr12:131238164|131238238:-_chr12:131238744|131238902:-_chr12:131268230|131268780:-","UN_AC078925.1_UP_LS0004","AC078925.1","lncRNA gene","no",2.36,0,0,0.004,35,0,0,"0(0)","LGG","no","NA","NA","NA","NA"]
["chr12:131459865|131466940:+","chr12:131434930|131435140:+_chr12:131459702|131459865:+_chr12:131466940|131467631:+","UN_AC117500.4_UP_LS0004","AC117500.4","lncRNA gene","no",4.25,0,0,0.002,23,0,0,"0(0)","GBM","no","NA","TE_intersect_:131466860|chr12|131466860|131467153|MLT1J1:ERVL-MaLR:LTR|245|-","NA","NA"]
["chr12:132154767|132158590:-","chr12:132153338|132154767:-_chr12:132158590|132158992:-_chr12:132159084|132159263:-","UN_DDX51_UP_LS0001","DDX51","protein coding gene","no",4.23,0,0,0.003,28,0,0,"0(0)","THYM","no","NA","TE_intersect_:132154673|chr12|132154673|132154847|MSTD:ERVL-MaLR:LTR|289|+","NA","NA"]
["chr12:132475694|132476036:-","chr12:132475409|132475694:-_chr12:132476036|132477780:-_chr12:132478081|132478368:-","UN_AC148476.1_UP_LS0021","AC148476.1","lncRNA gene","no",2.27,0,0,0.001,11,0,0,"0(0)","LAML","no","TE_intersect_:132475906|chr12|132475906|132476043|MLT1B:ERVL-MaLR:LTR|270|-","NA","NA","NA"]
["chr12:132755431|132755720:-","chr12:132735407|132737065:-_chr12:132741419|132741485:-_chr12:132743154|132743276:-_chr12:132747832|132748020:-_chr12:132748138|132748331:-_chr12:132750643|132750849:-_chr12:132754675|132755431:-_chr12:132755720|132761813:-","UN_ANKLE2_LS0061","ANKLE2","protein coding gene","no",5.22,0,0,0.003,26,0,0,"0(0)","LAML","no","TE_intersect_:132755561|chr12|132755561|132755847|AluSx1:Alu:SINE|122|-","TE_intersect_:132755261|chr12|132755261|132755561|AluSq:Alu:SINE|87|+","exon_intersect_chr12:132754675|132761888","exon_intersect_chr12:132754675|132761888"]
["chr12:133221379|133225536:-","chr12:133218312|133218971:-_chr12:133219283|133219367:-_chr12:133221205|133221379:-_chr12:133225536|133225828:-_chr12:133226318|133226438:-_chr12:133226936|133227152:-_chr12:133227824|133227947:-_chr12:133231517|133231644:-_chr12:133234108|133234378:-_chr12:133235807|133236117:-","UN_ANHX_LS0009","ANHX","protein coding gene","no",5.53,0,0,0.008,80,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr12:133221333|133226318","intron_intersect_chr12:133221333|133226318"]
["chr12:14709480|14709523:+","chr12:14704591|14705629:+_chr12:14705661|14709480:+_chr12:14709523|14710661:+","UN_AC010168.1_LS0015","AC010168.1","lncRNA gene","no",4.78,0,0,0.003,27,0,0,"0(0)","TGCT","no","TE_intersect_:14707186|chr12|14707186|14710156|HERVH-int:ERV1:LTR|89|-","TE_intersect_:14707186|chr12|14707186|14710156|HERVH-int:ERV1:LTR|89|-","intron_intersect_chr12:14696585|14718035","intron_intersect_chr12:14696585|14718035"]
["chr12:15539754|15540120:-","chr12:15539643|15539754:-_chr12:15540120|15540641:-","UN_PTPRO_LS0034","PTPRO","protein coding gene","no",3.29,0,0,0.004,37,0,0,"0(0)","READ","no","NA","TE_intersect_:15539478|chr12|15539478|15539791|AluSx1:Alu:SINE|115|+","intron_intersect_chr12:15526262|15546352","intron_intersect_chr12:15526262|15546352"]
["chr12:17918960|18041379:-","chr12:17730019|17736750:-_chr12:17918872|17918960:-_chr12:18041379|18041460:-_chr12:18045963|18046389:-","UN_LINC02378_UP_LS0007","LINC02378","lncRNA gene","no",3.51,0,0,0.005,44,0,0,"0(0)","ESCA;UCS","no","TE_intersect_:18040071|chr12|18040071|18041442|LTR12C:ERV1:LTR|67|+","TE_intersect_:17918789|chr12|17918789|17919151|THE1B:ERVL-MaLR:LTR|175|-","NA","NA"]
["chr12:19843784|19916461:-","chr12:19838075|19838939:-_chr12:19840111|19840230:-_chr12:19843666|19843784:-_chr12:19916461|19916615:-","UN_AC024901.1_LS0007","AC024901.1","lncRNA gene","no",2.18,0,0,0.003,26,0,0,"0(0)","OV","no","NA","TE_intersect_:19843512|chr12|19843512|19843808|AluSp:Alu:SINE|98|+","intron_intersect_chr12:19775603|19923198","intron_intersect_chr12:19775603|19923198"]
["chr12:20709600|20709939:+","chr12:20709573|20709600:+_chr12:20709939|20710762:+","UN_SLCO1C1_LS0004","SLCO1C1","protein coding gene","no",4.07,0,0,0.003,29,0,0,"0(0)","ESCA","no","TE_intersect_:20709599|chr12|20709599|20709917|AluYb8:Alu:SINE|6|+","NA","intron_intersect_chr12:20706081|20711386","intron_intersect_chr12:20706081|20711386"]
["chr12:22070625|22082386:-","chr12:22063773|22063927:-_chr12:22066345|22066435:-_chr12:22068863|22069020:-_chr12:22070572|22070625:-_chr12:22082386|22082524:-","UN_ST8SIA1_LS0005","ST8SIA1","protein coding gene","no",5.64,0,0,0.002,22,0,0,"0(0)","UCS","no","NA","TE_intersect_:22070102|chr12|22070102|22070641|L1MCa:L1:LINE|253|+","intron_intersect_chr12:22070625|22087864","intron_intersect_chr12:22070625|22087864"]
["chr12:23126670|23127603:+","chr12:22699954|22700094:+_chr12:22861069|22861224:+_chr12:22869321|22869413:+_chr12:22887964|22888044:+_chr12:22969363|22969465:+_chr12:22970836|22971094:+_chr12:22972376|22972468:+_chr12:23046108|23046201:+_chr12:23053991|23054323:+_chr12:23057166|23057297:+_chr12:23057780|23057897:+_chr12:23126603|23126670:+_chr12:23127603|23127713:+","UN_AC087258.1_LS0002","AC087258.1","lncRNA gene","no",9.84,0,0,0.004,34,0,0,"0(0)","THYM","no","NA","TE_intersect_:23127473|chr12|23127473|23127655|MamSINE1:tRNA-RTE:SINE|286|-","intron_intersect_chr12:23108493|23167039","intron_intersect_chr12:23108493|23167039"]
["chr12:25102241|25102420:+","chr12:25096958|25097044:+_chr12:25101178|25101325:+_chr12:25102198|25102241:+_chr12:25102420|25103127:+","UN_LRMP_LS0017","LRMP","protein coding gene","yes",3.63,0,0,0.002,18,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr12:25102198|25102778","exon_intersect_chr12:25102198|25102778"]
["chr12:26231119|26271663:-","chr12:26230849|26231119:-_chr12:26271663|26271822:-","UN_SSPN_LS0104","SSPN","protein coding gene","no",2.55,0,0,0.016,156,0,0,"0(0)","KIRC;OV","no","NA","NA","exon_intersect_chr12:26271663|26271920","exon_intersect_chr12:26230711|26234779"]
["chr12:26785008|26787945:+","chr12:26784365|26785008:+_chr12:26787945|26788023:+_chr12:26789361|26789697:+","UN_ITPR2_LS0099","ITPR2","protein coding gene","no",4.08,0,0,0.007,71,0,0,"0(0)","TGCT","no","TE_intersect_:26784371|chr12|26784371|26785353|SVA_D:SVA:Retroposon|99|+","TE_intersect_:26787922|chr12|26787922|26788221|AluSp:Alu:SINE|77|-","intron_intersect_chr12:26726013|26790157","intron_intersect_chr12:26726013|26790157"]
["chr12:27032681|27046158:+","chr12:27022562|27022621:+_chr12:27026420|27026534:+_chr12:27027347|27027447:+_chr12:27028285|27028429:+_chr12:27030158|27030272:+_chr12:27030734|27030819:+_chr12:27032144|27032230:+_chr12:27032650|27032681:+_chr12:27046158|27046232:+_chr12:27059345|27059460:+_chr12:27060905|27060993:+_chr12:27064276|27064496:+_chr12:27066135|27066226:+_chr12:27066841|27066897:+_chr12:27121946|27122044:+_chr12:27123176|27123381:+_chr12:27129567|27129702:+_chr12:27133531|27133617:+_chr12:27134973|27135086:+_chr12:27139293|27139454:+_chr12:27139966|27140097:+_chr12:27144992|27145084:+_chr12:27147542|27147656:+_chr12:27148530|27148604:+_chr12:27156096|27156301:+_chr12:27185276|27185443:+_chr12:27197190|27197704:+","UN_MED21_LS0017","MED21","protein coding gene","no",2.76,0,0,0.005,50,0,0,"0(0)","STAD","no","TE_intersect_:27032568|chr12|27032568|27033137|MER92B:ERV1:LTR|204|+","TE_intersect_:27046129|chr12|27046129|27046217|AluJo:Alu:SINE|136|-","intron_intersect_chr12:27030756|27037100","exon_intersect_chr12:27046152|27046232"]
["chr12:2843368|2848167:+","chr12:2836811|2836956:+_chr12:2840842|2840995:+_chr12:2843212|2843368:+_chr12:2848167|2848236:+_chr12:2858012|2858331:+_chr12:2859534|2859791:+","UN_ITFG2_LS0036","ITFG2","protein coding gene","no",2.45,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","TE_intersect_:2847955|chr12|2847955|2848174|MIRb:MIR:SINE|350|-","intron_intersect_chr12:2840995|2857252","intron_intersect_chr12:2840995|2857252"]
["chr12:29141456|29157533:-","chr12:29139752|29140075:-_chr12:29140206|29141456:-_chr12:29157533|29157622:-_chr12:29158375|29158539:-","UN_AC022081.1_UP_LS0024","AC022081.1","lncRNA gene","no",3.07,0,0,0.004,39,0,0,"0(0)","LGG","no","NA","TE_intersect_:29141277|chr12|29141277|29145140|LTR25-int:ERV1:LTR|171|-","intron_intersect_chr12:29156991|29171378","NA"]
["chr12:31117476|31121196:+","chr12:31117286|31117476:+_chr12:31121196|31121300:+_chr12:31123114|31123188:+_chr12:31124223|31124619:+","UN_AC024940.1_LS0017","AC024940.1","pseudogene","no",15.89,0,0,0.004,37,0,0,"0(0)","TGCT","no","TE_intersect_:31117416|chr12|31117416|31117564|HERVE-int:ERV1:LTR|117|+","TE_intersect_:31121135|chr12|31121135|31121738|HERVE-int:ERV1:LTR|97|+","intron_intersect_chr12:31117471|31125337","intron_intersect_chr12:31117471|31125337"]
["chr12:31637270|31651736:-","chr12:31633514|31637270:-_chr12:31651736|31652038:-","UN_AK4P3_UP_LS0007","AK4P3","pseudogene","no",2.26,0,0,0.005,49,0,0,"0(0)","TGCT","no","TE_intersect_:31651631|chr12|31651631|31651758|MER34D:ERV1:LTR|205|+","NA","intron_intersect_chr12:31647255|31659187","NA"]
["chr12:32755484|32755548:-","chr12:32746976|32747363:-_chr12:32749937|32750107:-_chr12:32750719|32750874:-_chr12:32753918|32754085:-_chr12:32755096|32755484:-_chr12:32755548|32755796:-","UN_YARS2_LS0028","YARS2","protein coding gene","no",3.01,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr12:32755096|32755902","exon_intersect_chr12:32755096|32755902"]
["chr12:3489602|3489929:-","chr12:3485422|3489602:-_chr12:3489929|3490954:-","UN_PRMT8_LS0015","PRMT8","protein coding gene","no",2.47,0,0,0.007,68,0,0,"0(0)","THCA","no","NA","NA","intron_intersect_chr12:3469296|3491236","intron_intersect_chr12:3469296|3491236"]
["chr12:38776301|38799904:-","chr12:38653371|38654070:-_chr12:38670729|38670802:-_chr12:38675717|38675774:-_chr12:38677452|38677554:-_chr12:38685490|38685617:-_chr12:38693657|38693838:-_chr12:38702875|38702921:-_chr12:38723772|38723833:-_chr12:38724846|38724899:-_chr12:38730283|38730358:-_chr12:38760847|38760888:-_chr12:38762112|38762216:-_chr12:38767635|38767738:-_chr12:38776238|38776301:-_chr12:38799904|38800025:-","UN_CPNE8_LS0033","CPNE8","protein coding gene","no",1.52,0,0,0.004,37,0,0,"0(0)","TGCT","no","TE_intersect_:38799646|chr12|38799646|38805673|L1HS:L1:LINE|8|+","NA","intron_intersect_chr12:38776301|38829379","intron_intersect_chr12:38776301|38829379"]
["chr12:40208965|40225555:+","chr12:40156239|40156343:+_chr12:40198206|40198388:+_chr12:40198557|40198661:+_chr12:40203452|40203844:+_chr12:40207129|40207256:+_chr12:40207791|40207997:+_chr12:40208865|40208965:+_chr12:40225555|40225640:+_chr12:40232274|40232383:+_chr12:40235626|40235714:+_chr12:40237969|40238103:+_chr12:40240483|40240617:+_chr12:40243550|40243681:+_chr12:40249826|40249945:+_chr12:40251232|40251374:+_chr12:40251465|40251544:+_chr12:40252910|40253016:+_chr12:40257248|40257377:+_chr12:40259480|40259604:+_chr12:40263789|40263901:+_chr12:40274583|40274727:+_chr12:40274854|40274993:+_chr12:40277888|40278016:+_chr12:40278091|40278261:+_chr12:40283875|40284133:+_chr12:40287351|40287539:+_chr12:40293545|40293663:+_chr12:40294845|40294914:+_chr12:40295427|40298493:+_chr12:40299109|40299257:+_chr12:40302789|40302882:+_chr12:40303948|40304134:+_chr12:40308467|40308696:+_chr12:40309106|40309233:+_chr12:40310431|40310649:+_chr12:40313972|40314173:+_chr12:40315212|40315300:+_chr12:40319988|40320175:+_chr12:40321034|40321188:+_chr12:40322035|40322181:+_chr12:40322319|40322510:+_chr12:40323160|40323306:+_chr12:40328360|40328460:+_chr12:40334967|40335157:+_chr12:40340294|40340454:+_chr12:40346753|40346923:+_chr12:40348409|40348509:+_chr12:40351539|40351733:+_chr12:40354299|40354492:+_chr12:40356115|40356187:+_chr12:40359260|40359444:+_chr12:40363402|40363554:+_chr12:40364842|40369281:+","UN_LRRK2_LS0006","LRRK2","protein coding gene","no",3.18,0,0,0.005,46,0,0,"0(0)","KIRP","no","NA","NA","intron_intersect_chr12:40196773|40223076","exon_intersect_chr12:40225555|40225640"]
["chr12:41187479|41187570:+","chr12:41186949|41187479:+_chr12:41187570|41189103:+_chr12:41191458|41191544:+_chr12:41194081|41194188:+_chr12:41506456|41506712:+_chr12:41509811|41509913:+_chr12:41552656|41552754:+_chr12:41555698|41555760:+_chr12:41563548|41563649:+_chr12:41567783|41567899:+_chr12:41572364|41574118:+","UN_PDZRN4_UP_LS0016","PDZRN4","protein coding gene","no",1.62,0,0,0.001,13,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr12:43066798|43106092:+","chr12:43066260|43066798:+_chr12:43106092|43107045:+","UN_LINC02461_UP_LS0006","LINC02461","lncRNA gene","no",6.37,0,0,0.003,29,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr12:45282526|45302014:+","chr12:45282497|45282526:+_chr12:45302014|45302093:+_chr12:45331295|45331423:+_chr12:45347022|45347087:+_chr12:45348028|45348315:+_chr12:45348518|45348631:+_chr12:45350659|45350774:+_chr12:45357290|45357424:+_chr12:45367688|45367793:+_chr12:45378053|45378113:+_chr12:45388161|45388303:+_chr12:45390421|45390498:+_chr12:45401795|45402020:+_chr12:45403072|45403241:+_chr12:45403439|45403536:+_chr12:45409357|45409487:+_chr12:45416699|45416904:+_chr12:45421071|45421273:+_chr12:45422957|45423062:+_chr12:45429105|45432351:+","UN_ANO6_LS0008","ANO6","protein coding gene","no",2.57,0,0,0.005,51,0,0,"0(0)","THCA","no","TE_intersect_:45281796|chr12|45281796|45282612|L2a:L2:LINE|318|-","NA","intron_intersect_chr12:45270524|45292683","exon_intersect_chr12:45302014|45302093"]
["chr12:46715828|46716404:-","chr12:46715235|46715360:-_chr12:46715773|46715828:-_chr12:46716404|46716503:-","UN_AC008014.1_LS0091","AC008014.1","lncRNA gene","no",3.29,0,0,0.004,34,0,0,"0(0)","LUSC","no","TE_intersect_:46716318|chr12|46716318|46716664|THE1B:ERVL-MaLR:LTR|115|-","TE_intersect_:46715599|chr12|46715599|46715930|L1MEg:L1:LINE|245|+","intron_intersect_chr12:46682713|46764761","intron_intersect_chr12:46682713|46764761"]
["chr12:47781248|47781306:-","chr12:47781147|47781248:-_chr12:47781306|47781660:-","UN_SLC48A1_LS0055","SLC48A1","protein coding gene","no",6.77,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr12:47780145|47782753","exon_intersect_chr12:47780145|47782753"]
["chr12:48489354|48489749:+","chr12:48489172|48489354:+_chr12:48489749|48489864:+_chr12:48490812|48490836:+_chr12:48492947|48492995:+_chr12:48494798|48494979:+_chr12:48496181|48496386:+","UN_C12orf54_LS0012","C12orf54","protein coding gene","no",1.3,0,0,0.009,91,0,0,"0(0)","CESC;HNSC;LUSC","no","NA","TE_intersect_:48489725|chr12|48489725|48490021|AluSx:Alu:SINE|122|-","intron_intersect_chr12:48489294|48490812","intron_intersect_chr12:48489294|48490812"]
["chr12:49128212|49185206:+","chr12:49128011|49128212:+_chr12:49185206|49185578:+","UN_TUBA1C_UP_LS0016","TUBA1C","protein coding gene","no",65.8,0,0,0.004,39,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr12:49127782|49128938","exon_intersect_chr12:49184796|49185990"]
["chr12:49186345|49265099:+","chr12:49127786|49128940:+_chr12:49129245|49129352:+_chr12:49186337|49186345:+_chr12:49265099|49265184:+_chr12:49269465|49269687:+_chr12:49269828|49269976:+_chr12:49272253|49274591:+","UN_PRPH_UP_LS0121","PRPH","protein coding gene","no",5.61,0.24,0,0.002,21,0.001,1,"0(0)","ESCA","no","NA","NA","exon_intersect_chr12:49186016|49186864","exon_intersect_chr12:49264907|49265184"]
["chr12:49515578|49519073:+","chr12:49515460|49515578:+_chr12:49519073|49519182:+_chr12:49522751|49522853:+_chr12:49524682|49524896:+_chr12:49525944|49527415:+","UN_SPATS2_LS0047","SPATS2","protein coding gene","no",2.88,0,0,0.003,25,0,0,"0(0)","CHOL;LIHC","no","NA","NA","intron_intersect_chr12:49514613|49519073","exon_intersect_chr12:49519073|49519182"]
["chr12:49967217|49975298:-","chr12:49959023|49959644:-_chr12:49964430|49964919:-_chr12:49965683|49965805:-_chr12:49967102|49967217:-_chr12:49975298|49975589:-","UN_AQP6_LS0002","AQP6","protein coding gene","no",0.64,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr12:49975072|49977139","exon_intersect_chr12:49967194|49967379"]
["chr12:51028874|51029565:-","chr12:50991599|50991672:-_chr12:50992190|50992339:-_chr12:50992810|50992929:-_chr12:50994544|50994630:-_chr12:50995629|50995787:-_chr12:50996817|50996972:-_chr12:50999174|50999241:-_chr12:50999345|50999415:-_chr12:51000313|51000419:-_chr12:51004788|51004907:-_chr12:51005311|51005436:-_chr12:51008476|51008624:-_chr12:51010695|51010766:-_chr12:51028177|51028411:-_chr12:51028511|51028874:-_chr12:51029565|51029605:-","UN_SLC11A2_UP_LS0002","SLC11A2","protein coding gene","no",2.85,0,0,0.004,41,0,0,"0(0)","OV","no","TE_intersect_:51029493|chr12|51029493|51029719|AluJb:Alu:SINE|195|+","NA","NA","NA"]
["chr12:5160385|5169154:+","chr12:5121936|5122437:+_chr12:5160307|5160385:+_chr12:5169154|5169303:+_chr12:5169775|5169879:+_chr12:5171809|5171889:+_chr12:5173014|5175759:+","UN_AC006206.2_UP_LS0013","AC006206.2","lncRNA gene","no",1.94,0,0,0.003,29,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr12:5169274|5169807:+","chr12:5121974|5122437:+_chr12:5160307|5160385:+_chr12:5169154|5169274:+_chr12:5169807|5169879:+_chr12:5171809|5171889:+_chr12:5173014|5175759:+","UN_AC006206.2_UP_LS0016","AC006206.2","lncRNA gene","no",1.69,0,0,0.004,36,0,0,"0(0)","TGCT","no","NA","TE_intersect_:5169781|chr12|5169781|5169924|MIRb:MIR:SINE|243|-","NA","NA"]
["chr12:52222943|52223446:+","chr12:52208809|52208875:+_chr12:52222690|52222943:+_chr12:52223446|52223813:+","UN_LINC00592_LS0030","LINC00592","lncRNA gene","no",9.83,0,0,0.006,59,0,0,"0(0)","HNSC","no","TE_intersect_:52222659|chr12|52222659|52222958|AluJb:Alu:SINE|184|-","TE_intersect_:52223189|chr12|52223189|52225217|HAL1:L1:LINE|290|+","intron_intersect_chr12:52222028|52223446","exon_intersect_chr12:52223446|52223804"]
["chr12:52491709|52519134:-","chr12:52487155|52487955:-_chr12:52488069|52488103:-_chr12:52488328|52488548:-_chr12:52489943|52490068:-_chr12:52490569|52490733:-_chr12:52490858|52490953:-_chr12:52491112|52491172:-_chr12:52491522|52491709:-_chr12:52519134|52519160:-_chr12:52519742|52520001:-_chr12:52813803|52814115:-","UN_KRT6C_UP_LS0005","KRT6C","protein coding gene","no",925.22,0,0,0.005,47,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr12:52518946|52519160","exon_intersect_chr12:52491522|52491736"]
["chr12:52936248|52941798:-","chr12:52899794|52900065:-_chr12:52900588|52900683:-_chr12:52901159|52901219:-_chr12:52901864|52902072:-_chr12:52904658|52905027:-_chr12:52936127|52936248:-_chr12:52941798|52942181:-","UN_KRT8_LS0318","KRT8","protein coding gene","no",2.67,0,0,0.004,38,0,0,"0(0)","COAD","no","NA","TE_intersect_:52935971|chr12|52935971|52936282|AluSg:Alu:SINE|109|+","intron_intersect_chr12:52926469|52946614","intron_intersect_chr12:52926469|52946614"]
["chr12:53750965|53751253:-","chr12:53746341|53746547:-_chr12:53746708|53746848:-_chr12:53750317|53750394:-_chr12:53750874|53750965:-_chr12:53751253|53751965:-","UN_CISTR_LS0001","CISTR","lncRNA gene","no",1.59,0,0,0.003,31,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr12:53750965|53751774","intron_intersect_chr12:53750965|53751774"]
["chr12:5402196|5402314:+","chr12:5392514|5392918:+_chr12:5401674|5402196:+_chr12:5402314|5402409:+_chr12:5404162|5404299:+_chr12:5405353|5405456:+_chr12:5410025|5412927:+","UN_AC007848.1_LS0010","AC007848.1","lncRNA gene","no",2.04,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr12:5388621|5402314","exon_intersect_chr12:5402314|5402409"]
["chr12:54523913|54526581:-","chr12:54523846|54523913:-_chr12:54526581|54526727:-","UN_NCKAP1L_LS0012","NCKAP1L","protein coding gene","no",7.34,0,0,0.003,27,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr12:54526528|54526746","exon_intersect_chr12:54523825|54523956"]
["chr12:55684745|55684858:-","chr12:55684572|55684745:-_chr12:55684858|55685383:-_chr12:55687971|55688096:-_chr12:55688202|55688300:-_chr12:55688844|55688957:-_chr12:55692844|55692975:-_chr12:55693141|55693317:-_chr12:55694021|55694123:-_chr12:55694256|55694330:-_chr12:55694443|55694522:-_chr12:55694615|55694695:-_chr12:55694778|55694970:-_chr12:55695522|55695637:-_chr12:55696283|55696416:-","UN_ITGA7_LS0002","ITGA7","protein coding gene","yes",8.56,0,0,0.009,89,0,0,"0(0)","TGCT;UCS","no","NA","NA","exon_intersect_chr12:55684568|55685288","exon_intersect_chr12:55684568|55685288"]
["chr12:55957293|55957527:+","chr12:55956111|55956217:+_chr12:55956950|55957098:+_chr12:55957177|55957187:+_chr12:55957216|55957293:+_chr12:55957527|55957537:+_chr12:55957959|55958132:+","UN_PMEL_LS0065","PMEL","protein coding gene","no",523.84,0,0,0.002,20,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr12:55956949|55957671","exon_intersect_chr12:55956949|55957671"]
["chr12:56103918|56104288:-","chr12:56103799|56103918:-_chr12:56104288|56104403:-","UN_AC034102.2_LS0002","AC034102.2","protein coding gene","no",2.93,0,0,0.004,36,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr12:56103505|56104319","intron_intersect_chr12:56103505|56104319"]
["chr12:5647801|5659444:-","chr12:5562658|5563568:-_chr12:5565558|5565663:-_chr12:5575834|5576015:-_chr12:5577955|5578007:-_chr12:5578366|5578518:-_chr12:5599484|5599629:-_chr12:5612656|5612756:-_chr12:5612901|5612958:-_chr12:5615186|5615297:-_chr12:5635152|5635347:-_chr12:5647727|5647801:-_chr12:5659444|5659900:-","UN_ANO2_LS0023","ANO2","protein coding gene","no",8.85,0,0,0.007,63,0,0,"0(0)","SKCM;TGCT","no","NA","NA","intron_intersect_chr12:5647801|5732514","intron_intersect_chr12:5647801|5732514"]
["chr12:57244366|57244916:-","chr12:57243459|57243910:-_chr12:57244088|57244225:-_chr12:57244315|57244366:-_chr12:57244916|57244965:-_chr12:57246804|57246901:-_chr12:57248126|57248198:-_chr12:57248706|57248803:-_chr12:57249041|57249308:-_chr12:57249571|57249637:-_chr12:57250993|57251184:-","STAC3_LS005","STAC3","protein coding gene","no",6.37,0,0,0.002,23,0,0,"0(0)","PCPG;UCS","yes","NA","NA","exon_intersect_chr12:57244757|57244965","intron_intersect_chr12:57244366|57244537"]
["chr12:57821708|57821782:+","chr12:57821369|57821546:+_chr12:57821622|57821708:+_chr12:57821782|57821889:+","UN_CTDSP2_LS0102","CTDSP2","protein coding gene","no",0.73,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr12:57819927|57823727","exon_intersect_chr12:57819927|57823727"]
["chr12:59094720|59104225:-","chr12:59093844|59094720:-_chr12:59104225|59104331:-_chr12:59105180|59105324:-","UN_AC068305.1_UP_LS0003","AC068305.1","pseudogene","no",2.5,0,0,0.009,82,0,0,"0(0)","OV","no","TE_intersect_:59102077|chr12|59102077|59105250|HERVH-int:ERV1:LTR|103|+","NA","NA","NA"]
["chr12:6321557|6321856:+","chr12:6318311|6321557:+_chr12:6321856|6328757:+","UN_PLEKHG6_LS0018","PLEKHG6","protein coding gene","no",4.75,0,0,0.001,11,0,0,"0(0)","LAML","no","TE_intersect_:6321556|chr12|6321556|6321847|AluYc:Alu:SINE|31|+","NA","intron_intersect_chr12:6319673|6326428","intron_intersect_chr12:6319673|6326428"]
["chr12:6360379|6360462:+","chr12:6356392|6357129:+_chr12:6360192|6360379:+_chr12:6360462|6362053:+","UN_SCNN1A_LS0116","SCNN1A","protein coding gene","no",1.56,0,0,0.003,25,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr12:6356394|6362051","intron_intersect_chr12:6356394|6362051"]
["chr12:65279517|65326826:+","chr12:65278926|65279517:+_chr12:65326826|65326934:+_chr12:65328526|65328603:+_chr12:65368998|65369026:+_chr12:65453728|65453825:+_chr12:65463155|65466906:+","UN_MSRB3_LS0004","MSRB3","protein coding gene","no",2.58,0,0,0.003,24,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr12:65279071|65281657","exon_intersect_chr12:65326826|65326934"]
["chr12:65881343|65881718:-","chr12:65869612|65874189:-_chr12:65876875|65877132:-_chr12:65881238|65881343:-_chr12:65881718|65882041:-","UN_HMGA2_LS0025","HMGA2","protein coding gene","yes",3.2,0,0,0.009,84,0,0,"0(0)","THCA","no","NA","NA","exon_intersect_chr12:65881718|65882167","exon_intersect_chr12:65881238|65881578"]
["chr12:6698104|6698330:-","chr12:6697580|6697792:-_chr12:6698045|6698104:-_chr12:6698330|6698377:-","UN_PIANP_LS0007","PIANP","protein coding gene","no",1.35,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr12:6698306|6698457","exon_intersect_chr12:6698045|6698306"]
["chr12:6748398|6748448:+","chr12:6748009|6748398:+_chr12:6748448|6748707:+","UN_MLF2_LS0046","MLF2","protein coding gene","no",5.37,0,0,0.004,36,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr12:6747996|6748547","exon_intersect_chr12:6747996|6748547"]
["chr12:6780419|6784901:-","chr12:6780081|6780419:-_chr12:6784901|6785083:-_chr12:6786734|6786807:-","UN_MLF2_UP_LS0012","MLF2","protein coding gene","no",3.27,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","TE_intersect_:6780304|chr12|6780304|6780606|AluJb:Alu:SINE|169|+","NA","NA"]
["chr12:6870535|6870559:-","chr12:6870295|6870535:-_chr12:6870559|6870774:-","UN_TPI1_LS0081","TPI1","protein coding gene","no",5.35,0,0,0.007,68,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr12:6870265|6870948","exon_intersect_chr12:6870265|6870948"]
["chr12:6938652|6938914:-","chr12:6938480|6938652:-_chr12:6938914|6939059:-","UN_ATN1_LS0269","ATN1","protein coding gene","no",2.87,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr12:6938481|6939177","exon_intersect_chr12:6938481|6939177"]
["chr12:70070963|70081939:+","chr12:70070796|70070963:+_chr12:70081939|70082024:+_chr12:70085058|70085691:+","UN_LINC01481_LS0010","LINC01481","lncRNA gene","no",3.8,0,0,0.007,64,0,0,"0(0)","PRAD","no","TE_intersect_:70070885|chr12|70070885|70071098|MIRb:MIR:SINE|317|-","TE_intersect_:70081760|chr12|70081760|70082326|MLT1K:ERVL-MaLR:LTR|315|-","intron_intersect_chr12:69959097|70180338","intron_intersect_chr12:69959097|70180338"]
["chr12:7110572|7111223:+","chr12:7108304|7108481:+_chr12:7108673|7108947:+_chr12:7110298|7110572:+_chr12:7111223|7111606:+_chr12:7112007|7112064:+_chr12:7115130|7123683:+","UN_C1RL-AS1_LS0012","C1RL-AS1","lncRNA gene","no",3.42,0,0,0.006,58,0,0,"0(0)","ESCA","no","NA","TE_intersect_:7111077|chr12|7111077|7111409|L1MEf:L1:LINE|228|+","intron_intersect_chr12:7110572|7111025","exon_intersect_chr12:7111025|7111606"]
["chr12:73163233|73339776:+","chr12:73152937|73153817:+_chr12:73163194|73163233:+_chr12:73339776|73339874:+_chr12:73363073|73363397:+_chr12:73363809|73372144:+","UN_AC087879.1_UP_LS0003","AC087879.1","pseudogene","no",3.39,0,0,0.006,59,0,0,"0(0)","ESCA;OV;THYM","no","TE_intersect_:73162816|chr12|73162816|73163408|MER4-int:ERV1:LTR|94|+","NA","intron_intersect_chr12:73163233|73203815","NA"]
["chr12:74988348|74990289:+","chr12:74984071|74984520:+_chr12:74984735|74985085:+_chr12:74988302|74988348:+_chr12:74990289|74990352:+_chr12:74991815|74992011:+_chr12:75020975|75021084:+_chr12:75025074|75025185:+_chr12:75040958|75043416:+","UN_AC073525.1_UP_LS0042","AC073525.1","lncRNA gene","no",3.16,0,0,0.003,31,0,0,"0(0)","PRAD","no","NA","NA","NA","NA"]
["chr12:76699022|76699765:-","chr12:76697408|76699022:-_chr12:76699765|76699897:-_chr12:76719004|76719171:-","UN_OSBPL8_UP_LS0007","OSBPL8","protein coding gene","no",6.84,0,0,0.003,30,0,0,"0(0)","GBM","no","TE_intersect_:76699666|chr12|76699666|76699777|MIRb:MIR:SINE|279|+","NA","NA","NA"]
["chr12:7793212|7794457:+","chr12:7787794|7787843:+_chr12:7788419|7788578:+_chr12:7789620|7789765:+_chr12:7792950|7793212:+_chr12:7794457|7794543:+_chr12:7794679|7794808:+","NANOG_LS006","NANOG","protein coding gene","yes",15.63,0.68,0.69,0.033,318,0.01,7,"0.066(1155)","TGCT","yes","NA","NA","intron_intersect_chr12:7793212|7794457","exon_intersect_chr12:7794457|7794543"]
["chr12:79540446|79542252:+","chr12:79540203|79540446:+_chr12:79542252|79542391:+_chr12:79546066|79546176:+_chr12:79550109|79553212:+","UN_AC027288.1_LS0004","AC027288.1","lncRNA gene","no",2.15,0,0,0.002,17,0,0,"0(0)","MESO","no","TE_intersect_:79540300|chr12|79540300|79543266|HERVH-int:ERV1:LTR|91|+","TE_intersect_:79540300|chr12|79540300|79543266|HERVH-int:ERV1:LTR|91|+","intron_intersect_chr12:79540446|79542206","exon_intersect_chr12:79542206|79542410"]
["chr12:80080936|80083540:+","chr12:80080246|80080936:+_chr12:80083540|80083698:+_chr12:80083960|80087985:+","UN_OTOGL_UP_LS0015","OTOGL","protein coding gene","no",1.93,0,0,0.006,56,0,0,"0(0)","ESCA","no","TE_intersect_:80080827|chr12|80080827|80084722|L1PA7:L1:LINE|119|-","TE_intersect_:80080827|chr12|80080827|80084722|L1PA7:L1:LINE|119|-","NA","NA"]
["chr12:80777582|80778905:+","chr12:80777493|80777582:+_chr12:80778905|80779045:+_chr12:80781441|80781509:+_chr12:80877835|80878018:+_chr12:80885820|80885936:+","UN_ACSS3_UP_LS0001","ACSS3","protein coding gene","no",3.21,0,0,0.011,102,0,0,"0(0)","KICH;LIHC;UVM","no","TE_intersect_:80777297|chr12|80777297|80777665|THE1B:ERVL-MaLR:LTR|89|+","NA","NA","NA"]
["chr12:8509551|8515236:+","chr12:8509475|8509551:+_chr12:8515236|8515328:+_chr12:8518164|8518274:+_chr12:8519009|8519160:+_chr12:8520226|8520341:+_chr12:8521124|8522366:+","UN_CLEC4D_LS0002","CLEC4D","protein coding gene","no",6.68,0,0,0.004,36,0,0,"0(0)","TGCT","no","TE_intersect_:8506861|chr12|8506861|8509796|L1PREC2:L1:LINE|251|-","NA","intron_intersect_chr12:8509551|8512374","exon_intersect_chr12:8515236|8515328"]
["chr12:8641367|8648097:+","chr12:8623899|8625141:+_chr12:8634361|8640308:+_chr12:8641280|8641367:+_chr12:8648097|8648483:+","UN_MFAP5_LS0005","MFAP5","protein coding gene","no",2.12,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:8641202|chr12|8641202|8641499|MSTD:ERVL-MaLR:LTR|211|-","NA","intron_intersect_chr12:8641364|8645956","exon_intersect_chr12:8645956|8648203"]
["chr12:88382574|88388480:-","chr12:88377351|88382574:-_chr12:88388480|88388964:-","UN_CEP290_UP_LS0016","CEP290","protein coding gene","no",91.25,0,0,0.006,55,0,0,"0(0)","DLBC","no","TE_intersect_:88387340|chr12|88387340|88388520|LOR1-int:ERV1:LTR|136|-","TE_intersect_:88381856|chr12|88381856|88384018|LOR1-int:ERV1:LTR|145|-","NA","NA"]
["chr12:89656107|89677622:-","chr12:89603838|89603925:-_chr12:89604155|89604346:-_chr12:89609937|89610043:-_chr12:89610421|89610508:-_chr12:89611193|89613673:-_chr12:89616802|89617039:-_chr12:89619999|89620240:-_chr12:89621549|89621791:-_chr12:89624183|89624397:-_chr12:89626454|89626615:-_chr12:89627678|89627716:-_chr12:89630505|89630645:-_chr12:89634778|89634903:-_chr12:89634997|89635251:-_chr12:89642158|89642355:-_chr12:89655679|89656107:-_chr12:89677622|89708831:-","UN_ATP2B1_LS0033","ATP2B1","protein coding gene","no",1.68,0,0,0.004,35,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr12:89656111|89708596","exon_intersect_chr12:89655583|89656111"]
["chr12:91680872|91693862:+","chr12:91624656|91638656:+_chr12:91639489|91639617:+_chr12:91662015|91662129:+_chr12:91674200|91674290:+_chr12:91680017|91680293:+_chr12:91680790|91680872:+_chr12:91693862|91694185:+_chr12:91760358|91763531:+","UN_LINC02404_UP_LS0003","LINC02404","lncRNA gene","no",7.93,0,0,0.004,43,0,0,"0(0)","LIHC","no","NA","TE_intersect_:91693831|chr12|91693831|91694135|AluJb:Alu:SINE|197|-","exon_intersect_chr12:91680790|91680873","NA"]
["chr12:92421173|92421265:-","chr12:92420085|92420460:-_chr12:92420999|92421173:-_chr12:92421265|92421435:-","UN_CLLU1OS_LS0003","CLLU1OS","protein coding gene","no",6.37,0,0,0.003,30,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr12:92421173|92421531","intron_intersect_chr12:92421173|92421531"]
["chr12:9322927|9323876:+","chr12:9322717|9322927:+_chr12:9323876|9323986:+_chr12:9340457|9340720:+","UN_LINC02367_UP_LS0024","LINC02367","lncRNA gene","no",2.74,0.02,0,0.028,266,0.001,1,"0(0)","CHOL","no","NA","TE_intersect_:9323740|chr12|9323740|9325723|HERVS71-int:ERV1:LTR|156|-","NA","NA"]
["chr12:9323986|9327669:+","chr12:9323894|9323986:+_chr12:9327669|9327793:+_chr12:9340457|9340698:+","UN_LINC02367_UP_LS0025","LINC02367","lncRNA gene","no",2.64,0,0,0.009,87,0,0,"0(0)","TGCT;THYM;UCS","no","TE_intersect_:9323740|chr12|9323740|9325723|HERVS71-int:ERV1:LTR|156|-","TE_intersect_:9325716|chr12|9325716|9327851|HERVS71-int:ERV1:LTR|180|-","NA","NA"]
["chr12:9406364|9407365:+","chr12:9406218|9406364:+_chr12:9407365|9407535:+","UN_AC141557.1_LS0032","AC141557.1","pseudogene","no",38.36,0,0,0.005,45,0,0,"0(0)","SKCM","no","TE_intersect_:9406304|chr12|9406304|9406453|HERVE-int:ERV1:LTR|123|+","TE_intersect_:9407304|chr12|9407304|9407906|HERVE-int:ERV1:LTR|97|+","intron_intersect_chr12:9402556|9414803","intron_intersect_chr12:9402556|9414803"]
["chr12:94410679|94411697:-","chr12:94378792|94379042:-_chr12:94400850|94403262:-_chr12:94410621|94410679:-_chr12:94411697|94411847:-_chr12:94412318|94412512:-","UN_CEP83_LS0035","CEP83","protein coding gene","no",0.75,0,0,0.013,120,0,0,"0(0)","ESCA;LAML;STAD;TGCT","no","NA","NA","exon_intersect_chr12:94411697|94411847","intron_intersect_chr12:94408104|94411697"]
["chr12:9562976|9564160:+","chr12:9560858|9562976:+_chr12:9564160|9564325:+_chr12:9565092|9565303:+_chr12:9567490|9567567:+_chr12:9569058|9569202:+_chr12:9570763|9570892:+_chr12:9571461|9571573:+_chr12:9573003|9573093:+_chr12:9573466|9573534:+_chr12:9574847|9574949:+_chr12:9575643|9576275:+","UN_AC092821.3_LS0024","AC092821.3","lncRNA gene","no",1.18,0.02,0,0.02,191,0.004,3,"0(0)","LAML","no","NA","NA","exon_intersect_chr12:9560817|9564325","exon_intersect_chr12:9560817|9564325"]
["chr12:97845308|98070419:-","chr12:97732581|97733400:-_chr12:97845215|97845308:-_chr12:98070419|98070528:-","UN_AC007424.1_UP_LS0001","AC007424.1","pseudogene","no",13.16,0,0,0.01,95,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr12:98605159|98605859:-","chr12:98605132|98605159:-_chr12:98605859|98606039:-","UN_SLC25A3_LS0028","SLC25A3","protein coding gene","no",3.5,0,0,0.006,55,0,0,"0(0)","GBM","no","TE_intersect_:98605836|chr12|98605836|98606127|AluJo:Alu:SINE|134|+","TE_intersect_:98605137|chr12|98605137|98605417|AluJb:Alu:SINE|157|+","exon_intersect_chr12:98601368|98606379","exon_intersect_chr12:98601368|98606379"]
["chr13:101705610|101708275:-","chr13:101698681|101699795:-_chr13:101705408|101705610:-_chr13:101708275|101708582:-","UN_ITGBL1_LS0008","ITGBL1","protein coding gene","no",2.87,0,0,0.003,25,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr13:101706902|101710804","intron_intersect_chr13:101692944|101706756"]
["chr13:104012970|104013592:-","chr13:104012720|104012970:-_chr13:104013592|104013701:-_chr13:104014028|104014068:-_chr13:104014289|104014794:-_chr13:104015504|104015571:-_chr13:104016435|104016558:-_chr13:104021905|104022009:-","UN_ATP6V1G1P7_UP_LS0007","ATP6V1G1P7","pseudogene","no",7.17,0,0,0.002,15,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr13:106190681|106213801:-","chr13:106051583|106064195:-_chr13:106190559|106190681:-_chr13:106213801|106213974:-","UN_RNA5SP38_UP_LS0004","RNA5SP38","no","no",2.91,0,0,0.015,141,0,0,"0(0)","ESCA;LUSC;STAD","no","TE_intersect_:106213540|chr13|106213540|106219555|L1PA2:L1:LINE|21|+","NA","NA","NA"]
["chr13:109148761|109149048:-","chr13:109145945|109147169:-_chr13:109148582|109148761:-_chr13:109149048|109149145:-_chr13:109149768|109149919:-_chr13:109150524|109152082:-_chr13:109159692|109159829:-","UN_MYO16_LS0036","MYO16","protein coding gene","no",3.94,0,0,0.002,18,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr13:109141376|109163902","intron_intersect_chr13:109141376|109163902"]
["chr13:109560490|109571074:-","chr13:109560401|109560490:-_chr13:109571074|109571338:-","AL163541.1_LS001","AL163541.1","lncRNA gene","no",2.91,0,0,0.003,25,0,0,"0(0)","LAML","yes","NA","TE_intersect_:109560403|chr13|109560403|109560534|L2b:L2:LINE|352|+","NA","NA"]
["chr13:110898663|110902016:-","chr13:110892692|110898663:-_chr13:110902016|110906095:-","UN_ANKRD10_LS0030","ANKRD10","protein coding gene","no",4.73,0,0,0.002,21,0,0,"0(0)","LAML","no","TE_intersect_:110901764|chr13|110901764|110902071|AluJr4:Alu:SINE|166|+","TE_intersect_:110898567|chr13|110898567|110898742|AluJb:Alu:SINE|170|-","intron_intersect_chr13:110900739|110903475","intron_intersect_chr13:110895321|110899056"]
["chr13:112675273|112678547:-","chr13:112668780|112671323:-_chr13:112675203|112675273:-_chr13:112678547|112679023:-_chr13:112679263|112679445:-_chr13:112679949|112680140:-","UN_ATP11AUN_LS0014","ATP11AUN","lncRNA gene","no",16.5,0,0,0.009,87,0,0,"0(0)","LUAD;TGCT;UVM","no","TE_intersect_:112677924|chr13|112677924|112679093|SVA_B:SVA:Retroposon|42|-","NA","intron_intersect_chr13:112647598|112679177","intron_intersect_chr13:112647598|112679177"]
["chr13:113162620|113162747:+","chr13:113158617|113158730:+_chr13:113160014|113160177:+_chr13:113160999|113161990:+_chr13:113162243|113162410:+_chr13:113162579|113162620:+_chr13:113162747|113163122:+_chr13:113164513|113164644:+_chr13:113165053|113165120:+_chr13:113166098|113166426:+_chr13:113170413|113170530:+_chr13:113171594|113172390:+","UN_PROZ_LS0022","PROZ","protein coding gene","no",3.19,0,0,0.003,31,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr13:113160972|113163009","intron_intersect_chr13:113160972|113163009"]
["chr13:113864246|113864428:-","chr13:113820499|113821018:-_chr13:113821958|113822186:-_chr13:113823375|113823550:-_chr13:113826996|113827164:-_chr13:113828547|113828711:-_chr13:113832299|113832488:-_chr13:113832634|113832752:-_chr13:113834551|113834672:-_chr13:113835513|113835635:-_chr13:113838069|113838191:-_chr13:113839728|113839850:-_chr13:113846527|113846589:-_chr13:113848026|113848050:-_chr13:113863575|113863741:-_chr13:113863833|113864246:-_chr13:113864428|113864591:-","UN_GAS6-DT_LS0001","GAS6-DT","lncRNA gene","no",1.69,0,0,0.005,45,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr13:113864295|113865010","exon_intersect_chr13:113864168|113864295"]
["chr13:18958417|18962127:-","chr13:18942359|18945245:-_chr13:18946710|18946994:-_chr13:18951670|18951829:-_chr13:18952521|18952591:-_chr13:18952715|18952893:-_chr13:18954928|18955043:-_chr13:18955537|18955656:-_chr13:18958026|18958417:-_chr13:18962127|18962274:-_chr13:18963949|18964136:-_chr13:18965188|18965366:-_chr13:18980131|18980283:-_chr13:18983354|18983421:-_chr13:18989897|18989994:-_chr13:18990569|18991013:-_chr13:18991649|18991778:-_chr13:18998323|18998412:-_chr13:19017186|19017266:-_chr13:19018154|19020260:-","UN_PHF2P2_LS0007","PHF2P2","pseudogene","no",5.26,0,0,0.011,104,0,0,"0(0)","STAD;THYM","no","NA","NA","intron_intersect_chr13:18962089|18962558","intron_intersect_chr13:18958417|18958993"]
["chr13:19018830|19024270:-","chr13:18942186|18945245:-_chr13:18946676|18946994:-_chr13:18951670|18951829:-_chr13:18952521|18952591:-_chr13:18952715|18952893:-_chr13:18954928|18955043:-_chr13:18955537|18955656:-_chr13:18958026|18958417:-_chr13:18962127|18962274:-_chr13:18963949|18964136:-_chr13:18965188|18965366:-_chr13:18980131|18980283:-_chr13:18983354|18983421:-_chr13:18989897|18989994:-_chr13:18990569|18991778:-_chr13:18998323|18998412:-_chr13:19017186|19017266:-_chr13:19018154|19018830:-_chr13:19024270|19024362:-_chr13:19026203|19026386:-_chr13:19026879|19026985:-_chr13:19045209|19047071:-_chr13:19047995|19048286:-_chr13:19049959|19050120:-_chr13:19051161|19051344:-_chr13:19052912|19053398:-_chr13:19056433|19056568:-_chr13:19062594|19062680:-_chr13:19065338|19065475:-_chr13:19071411|19071470:-_chr13:19072237|19074261:-_chr13:19113109|19113148:-_chr13:19113647|19113801:-_chr13:19117979|19118262:-","UN_PHF2P2_LS0030","PHF2P2","pseudogene","no",3,0,0,0.002,16,0,0,"0(0)","THYM","no","TE_intersect_:19024268|chr13|19024268|19024556|AluJb:Alu:SINE|167|+","NA","intron_intersect_chr13:19019336|19026001","exon_intersect_chr13:19018618|19018831"]
["chr13:19062680|19065338:-","chr13:19046173|19047071:-_chr13:19047995|19048286:-_chr13:19049959|19050120:-_chr13:19051161|19051344:-_chr13:19052912|19053398:-_chr13:19056433|19056568:-_chr13:19062594|19062680:-_chr13:19065338|19065475:-_chr13:19071411|19071470:-_chr13:19072237|19074261:-_chr13:19113109|19113148:-_chr13:19113647|19113801:-_chr13:19117979|19118330:-","UN_GTF2IP3_UP_LS0001","GTF2IP3","pseudogene","no",3.35,0,0,0.01,99,0,0,"0(0)","THYM","no","TE_intersect_:19065201|chr13|19065201|19065493|AluY:Alu:SINE|127|+","NA","NA","exon_intersect_chr13:19062591|19062718"]
["chr13:19239783|19243854:-","chr13:19201082|19201822:-_chr13:19204340|19204509:-_chr13:19208483|19208540:-_chr13:19210875|19210952:-_chr13:19219617|19219775:-_chr13:19227248|19227432:-_chr13:19239533|19239783:-_chr13:19243854|19243904:-","UN_PSPC1P1_UP_LS0006","PSPC1P1","pseudogene","no",1.62,0,0,0.007,70,0,0,"0(0)","ESCA;HNSC","no","TE_intersect_:19243448|chr13|19243448|19245701|L1PB1:L1:LINE|144|+","TE_intersect_:19239586|chr13|19239586|19239800|MLT1F:ERVL-MaLR:LTR|207|-","NA","NA"]
["chr13:19333594|19336075:-","chr13:19296442|19296850:-_chr13:19309642|19309782:-_chr13:19314714|19314747:-_chr13:19316887|19317057:-_chr13:19321373|19321539:-_chr13:19329538|19329608:-_chr13:19331626|19331751:-_chr13:19333399|19333471:-_chr13:19333566|19333594:-_chr13:19336075|19336165:-_chr13:19339457|19339529:-_chr13:19344575|19345015:-","UN_ANKRD26P3_LS0010","ANKRD26P3","pseudogene","no",5.58,0,0,0.001,12,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr13:19336075|19336153","intron_intersect_chr13:19333471|19334189"]
["chr13:20231505|20232934:-","chr13:20221971|20223495:-_chr13:20229580|20229749:-_chr13:20230698|20230807:-_chr13:20231382|20231505:-_chr13:20232934|20233057:-","UN_GJB2_UP_LS0002","GJB2","protein coding gene","yes",2.71,0,0,0.008,81,0,0,"0(0)","ESCA;LUSC","no","NA","NA","NA","intron_intersect_chr13:20231505|20232194"]
["chr13:21650154|21651304:-","chr13:21649840|21650154:-_chr13:21651304|21651665:-_chr13:21670597|21670715:-_chr13:21670817|21671016:-","UN_RPS7P10_UP_LS0003","RPS7P10","pseudogene","no",3.31,0,0,0.005,51,0,0,"0(0)","OV","no","TE_intersect_:21651160|chr13|21651160|21651319|L1ME4a:L1:LINE|286|-","NA","NA","NA"]
["chr13:22088329|22113505:-","chr13:22082880|22083211:-_chr13:22088258|22088329:-_chr13:22113505|22113614:-","UN_LINC00540_LS0022","LINC00540","lncRNA gene","no",2.95,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr13:22113338|22210285","intron_intersect_chr13:22041384|22099163"]
["chr13:23466168|23470514:+","chr13:23418971|23419301:+_chr13:23426967|23428450:+_chr13:23464502|23465651:+_chr13:23465750|23465942:+_chr13:23466019|23466168:+_chr13:23470514|23470642:+","UN_LINC00352_UP_LS0001","LINC00352","lncRNA gene","no",3.68,0,0,0.004,37,0,0,"0(0)","GBM","no","NA","NA","NA","exon_intersect_chr13:23470514|23470690"]
["chr13:23944502|23945750:-","chr13:23939557|23941024:-_chr13:23941290|23941469:-_chr13:23941626|23941740:-_chr13:23944407|23944502:-_chr13:23945750|23945980:-_chr13:23953989|23954199:-","UN_ANKRD20A19P_LS0004","ANKRD20A19P","pseudogene","no",1.91,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","TE_intersect_:23944384|chr13|23944384|23944668|AluSz:Alu:SINE|134|+","exon_intersect_chr13:23945750|23946782","intron_intersect_chr13:23941740|23945750"]
["chr13:24308018|24315982:+","chr13:24307720|24308018:+_chr13:24315982|24316169:+_chr13:24318818|24318880:+_chr13:24320996|24322585:+","UN_AL359736.1_LS0002","AL359736.1","protein coding gene","no",2.38,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr13:24307228|24309578","exon_intersect_chr13:24315725|24316121"]
["chr13:26509280|26509629:+","chr13:26509103|26509280:+_chr13:26509629|26509796:+_chr13:26518652|26518809:+","UN_WASF3_UP_LS0001","WASF3","protein coding gene","no",2.49,0,0,0.005,52,0,0,"0(0)","ACC;GBM","no","NA","TE_intersect_:26509516|chr13|26509516|26509686|LTR5B:ERVK:LTR|65|+","NA","NA"]
["chr13:27820467|27822755:-","chr13:27819045|27820467:-_chr13:27822755|27824348:-","PLUT_LS001","PLUT","lncRNA gene","no",3.4,0,0,0.006,61,0,0,"0(0)","PAAD","yes","NA","NA","NA","NA"]
["chr13:30205722|30205804:+","chr13:30205570|30205722:+_chr13:30205804|30205884:+","UN_KATNAL1_LS0004","KATNAL1","protein coding gene","no",2.88,0,0,0.002,17,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr13:30202630|30208738","exon_intersect_chr13:30202630|30208738"]
["chr13:30863578|30875274:+","chr13:30863452|30863578:+_chr13:30875274|30875366:+_chr13:30882560|30882659:+_chr13:30896466|30896591:+_chr13:30917403|30917512:+_chr13:30921014|30921126:+_chr13:30921561|30921846:+_chr13:30924311|30925572:+","UN_LINC00545_UP_LS0011","LINC00545","lncRNA gene","no",7.31,0,0,0.006,61,0,0,"0(0)","MESO;TGCT;UCS","no","TE_intersect_:30863143|chr13|30863143|30863642|MER74A:ERVL:LTR|198|+","TE_intersect_:30875107|chr13|30875107|30875373|AluJr:Alu:SINE|147|-","NA","NA"]
["chr13:31148092|31149954:-","chr13:31135040|31137524:-_chr13:31138407|31138568:-_chr13:31138781|31138900:-_chr13:31139000|31139107:-_chr13:31140184|31140309:-_chr13:31141122|31141259:-_chr13:31143792|31143923:-_chr13:31145563|31145768:-_chr13:31147959|31148092:-_chr13:31149954|31150182:-_chr13:31150947|31151191:-_chr13:31151609|31151742:-_chr13:31152852|31152951:-_chr13:31154633|31154755:-_chr13:31155514|31155654:-_chr13:31158806|31158863:-_chr13:31161476|31161997:-","UN_HSPH1_LS0019","HSPH1","protein coding gene","no",10.43,0,0,0.006,57,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr13:31149954|31150182","intron_intersect_chr13:31148092|31148374"]
["chr13:34803126|34803158:+","chr13:34802297|34803126:+_chr13:34803158|34803354:+","UN_NBEA_UP_LS0006","NBEA","protein coding gene","no",6.89,0,0,0.005,45,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:34802930|chr13|34802930|34803348|LTR7Y:ERV1:LTR|21|+","TE_intersect_:34802930|chr13|34802930|34803348|LTR7Y:ERV1:LTR|21|+","NA","NA"]
["chr13:37364150|37478605:+","chr13:37221214|37221326:+_chr13:37307352|37307417:+_chr13:37363997|37364150:+_chr13:37478605|37478703:+_chr13:37490427|37490840:+","UN_LINC00547_UP_LS0029","LINC00547","lncRNA gene","no",4.75,0,0,0.004,36,0,0,"0(0)","THYM","no","NA","TE_intersect_:37478409|chr13|37478409|37478783|MSTC:ERVL-MaLR:LTR|150|+","NA","NA"]
["chr13:41331369|41358304:+","chr13:41311295|41311582:+_chr13:41316846|41316930:+_chr13:41318806|41318910:+_chr13:41320667|41320824:+_chr13:41323056|41323190:+_chr13:41325698|41325851:+_chr13:41328724|41328843:+_chr13:41331274|41331369:+_chr13:41358304|41358473:+_chr13:41358810|41358962:+_chr13:41362031|41362159:+_chr13:41367439|41367652:+_chr13:41369090|41369204:+","UN_NAA16_LS0013","NAA16","protein coding gene","no",1.2,0,0,0.004,36,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr13:41331369|41336650","exon_intersect_chr13:41358304|41358718"]
["chr13:42867817|42872558:-","chr13:42849695|42850692:-_chr13:42862088|42862165:-_chr13:42866359|42867817:-_chr13:42872558|42873158:-","UN_LINC00428_UP_LS0013","LINC00428","lncRNA gene","no",5.37,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:42869731|chr13|42869731|42872703|HERVH-int:ERV1:LTR|93|-","TE_intersect_:42867604|chr13|42867604|42868000|BLACKJACK:hAT-Blackjack:DNA|261|+","NA","NA"]
["chr13:43088819|43107178:+","chr13:43055395|43062295:+_chr13:43065686|43065737:+_chr13:43068930|43069003:+_chr13:43078612|43078688:+_chr13:43085768|43085838:+_chr13:43088776|43088819:+_chr13:43107178|43114224:+","UN_DNAJC15_LS0059","DNAJC15","protein coding gene","no",2.35,0,0,0.021,199,0.001,1,"0(0)","DLBC;TGCT","no","TE_intersect_:43088750|chr13|43088750|43088872|L3:CR1:LINE|246|+","NA","intron_intersect_chr13:43085838|43107178","exon_intersect_chr13:43107178|43114224"]
["chr13:44423761|44426324:+","chr13:44423418|44423524:+_chr13:44423668|44423761:+_chr13:44426324|44426422:+","UN_AL138960.2_UP_LS0004","AL138960.2","lncRNA gene","no",1.84,0,0,0.002,20,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr13:47696757|47699355:-","chr13:47695084|47696757:-_chr13:47699355|47699497:-_chr13:47699617|47699845:-","UN_RN7SL700P_UP_LS0007","RN7SL700P","small non-coding RNA gene","no",2.59,0,0,0.005,47,0,0,"0(0)","THYM","no","NA","TE_intersect_:47696666|chr13|47696666|47696968|MLT1J2:ERVL-MaLR:LTR|296|-","NA","NA"]
["chr13:48569947|48570308:-","chr13:48567597|48568347:-_chr13:48569841|48569947:-_chr13:48570308|48570841:-_chr13:48573129|48573317:-","UN_RB1_LS0079","RB1","protein coding gene","yes",3.31,0,0,0.009,85,0,0,"0(0)","KIRC","no","TE_intersect_:48570257|chr13|48570257|48570379|MIR:MIR:SINE|281|-","TE_intersect_:48569736|chr13|48569736|48570257|MLT1D:ERVL-MaLR:LTR|214|+","NA","NA"]
["chr13:49378095|49379863:+","chr13:49377567|49378095:+_chr13:49379863|49380398:+","UN_CAB39L_LS0027","CAB39L","protein coding gene","no",2.48,0,0,0.006,58,0,0,"0(0)","TGCT","no","TE_intersect_:49377429|chr13|49377429|49378708|SVA_F:SVA:Retroposon|87|+","TE_intersect_:49379844|chr13|49379844|49380138|AluY:Alu:SINE|95|-","intron_intersect_chr13:49377131|49382507","intron_intersect_chr13:49377131|49382507"]
["chr13:49378259|49379863:+","chr13:49377390|49378259:+_chr13:49379863|49380177:+","UN_CAB39L_LS0032","CAB39L","protein coding gene","no",5.34,0.03,0,0.014,130,0.001,1,"0(0)","HNSC;TGCT","no","TE_intersect_:49377429|chr13|49377429|49378708|SVA_F:SVA:Retroposon|87|+","TE_intersect_:49379844|chr13|49379844|49380138|AluY:Alu:SINE|95|-","intron_intersect_chr13:49377131|49382507","intron_intersect_chr13:49377131|49382507"]
["chr13:50292704|50301989:+","chr13:50292635|50292704:+_chr13:50301989|50305537:+","UN_DLEU1_LS0019","DLEU1","lncRNA gene","yes",1,0,0,0.004,35,0,0,"0(0)","ESCA","no","TE_intersect_:50292552|chr13|50292552|50292860|AluSx1:Alu:SINE|94|+","TE_intersect_:50301847|chr13|50301847|50302130|AluSx1:Alu:SINE|92|+","intron_intersect_chr13:50275046|50293422","intron_intersect_chr13:50293533|50310162"]
["chr13:51176043|51180277:+","chr13:51172187|51172399:+_chr13:51175949|51176043:+_chr13:51180277|51180967:+","UN_C13orf42_LS0019","C13orf42","protein coding gene","no",3.27,0,0,0.004,42,0,0,"0(0)","TGCT","no","TE_intersect_:51175741|chr13|51175741|51176125|MSTA:ERVL-MaLR:LTR|133|+","NA","NA","exon_intersect_chr13:51180178|51180967"]
["chr13:52236128|52253745:-","chr13:52219344|52219630:-_chr13:52223239|52223331:-_chr13:52227005|52227096:-_chr13:52229326|52229431:-_chr13:52233064|52233144:-_chr13:52235220|52235281:-_chr13:52236041|52236128:-_chr13:52253745|52253833:-_chr13:52253937|52254018:-_chr13:52258529|52258590:-_chr13:52279841|52279905:-_chr13:52280652|52280715:-_chr13:52280862|52280961:-_chr13:52283238|52283357:-_chr13:52289822|52289983:-_chr13:52291507|52291596:-","UN_AL158066.1_LS0019","AL158066.1","lncRNA gene","no",1.97,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","TE_intersect_:52235788|chr13|52235788|52236194|L1PA16:L1:LINE|133|+","exon_intersect_chr13:52253745|52253833","intron_intersect_chr13:52235281|52253745"]
["chr13:54242386|54268139:-","chr13:54238135|54242386:-_chr13:54268139|54268218:-_chr13:54268626|54269401:-","UN_LINC00458_UP_LS0005","LINC00458","lncRNA gene","no",2.98,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:54267766|chr13|54267766|54268141|L1MC1:L1:LINE|153|+","NA","NA","NA"]
["chr13:55063002|55073351:+","chr13:55053894|55054458:+_chr13:55062872|55063002:+_chr13:55073351|55076890:+","UN_LINC02335_LS0002","LINC02335","lncRNA gene","no",2.82,0,0,0.007,69,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr13:55063002|55106770","intron_intersect_chr13:55063002|55106770"]
["chr13:57159462|57162760:+","chr13:57152858|57152893:+_chr13:57159436|57159462:+_chr13:57162760|57163348:+","UN_PRR20E_UP_LS0002","PRR20E","protein coding gene","no",0.16,0,0,0.001,11,0,0,"0(0)","LAML","no","TE_intersect_:57159462|chr13|57159462|57159531|AluJo:Alu:SINE|182|+","NA","NA","exon_intersect_chr13:57162092|57163653"]
["chr13:63738349|63740766:+","chr13:63738027|63738349:+_chr13:63740766|63740909:+_chr13:63742352|63742804:+","UN_OR7E156P_LS0002","OR7E156P","pseudogene","no",4.13,0,0,0.005,51,0,0,"0(0)","TGCT","no","TE_intersect_:63737818|chr13|63737818|63738351|HERVE-int:ERV1:LTR|110|-","TE_intersect_:63740314|chr13|63740314|63740912|HERVE-int:ERV1:LTR|132|-","NA","NA"]
["chr13:64003465|64075242:-","chr13:63842583|63853759:-_chr13:63990096|63990200:-_chr13:64002385|64002409:-_chr13:64003348|64003465:-_chr13:64075242|64085284:-","UN_LINC00355_LS0015","LINC00355","lncRNA gene","no",3.58,0,0,0.014,134,0,0,"0(0)","ESCA","no","TE_intersect_:64074921|chr13|64074921|64075752|MER52A:ERV1:LTR|203|-","TE_intersect_:64003196|chr13|64003196|64003494|AluSz:Alu:SINE|164|+","exon_intersect_chr13:64075242|64076011","intron_intersect_chr13:64003465|64034347"]
["chr13:66903605|67298233:-","chr13:66303345|66305028:-_chr13:66631210|66631411:-_chr13:66903504|66903605:-_chr13:67298233|67298440:-","UN_RNU7-87P_UP_LS0001","RNU7-87P","small non-coding RNA gene","no",4.54,0,0,0.015,141,0,0,"0(0)","GBM;LGG","no","NA","NA","NA","intron_intersect_chr13:66903605|66914398"]
["chr13:68408678|68431240:-","chr13:68404482|68404954:-_chr13:68408570|68408678:-_chr13:68431240|68431350:-_chr13:68438105|68438208:-","UN_RPL37P21_UP_LS0006","RPL37P21","pseudogene","no",4.16,0,0,0.003,33,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr13:73076841|73077029:-","chr13:73076641|73076841:-_chr13:73077029|73077122:-","UN_KLF5_LS0071","KLF5","protein coding gene","yes",6.73,0,0,0.005,48,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr13:73075708|73077542","exon_intersect_chr13:73075708|73077542"]
["chr13:75306471|75307575:-","chr13:75284665|75287025:-_chr13:75288934|75289110:-_chr13:75292102|75292271:-_chr13:75294854|75295013:-_chr13:75299330|75299574:-_chr13:75302243|75302401:-_chr13:75306313|75306471:-_chr13:75307575|75308761:-","UN_TBC1D4_LS0017","TBC1D4","protein coding gene","no",6.22,0,0,0.007,67,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr13:75306471|75309942","intron_intersect_chr13:75306471|75309942"]
["chr13:77937780|77938832:-","chr13:77895489|77898334:-_chr13:77899859|77899967:-_chr13:77900521|77900654:-_chr13:77901058|77901207:-_chr13:77903156|77903360:-_chr13:77903495|77903607:-_chr13:77918091|77918624:-_chr13:77919397|77919587:-_chr13:77924387|77924461:-_chr13:77931637|77931734:-_chr13:77937746|77937780:-_chr13:77938832|77939993:-_chr13:77944805|77944873:-_chr13:77975347|77975599:-","UN_EDNRB_LS0036","EDNRB","protein coding gene","yes",5.53,0,0,0.005,48,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:77935641|chr13|77935641|77938977|HERVH-int:ERV1:LTR|160|-","TE_intersect_:77935641|chr13|77935641|77938977|HERVH-int:ERV1:LTR|160|-","intron_intersect_chr13:77919918|77939162","intron_intersect_chr13:77919918|77939162"]
["chr13:81336014|81339706:-","chr13:81306226|81306322:-_chr13:81330056|81330139:-_chr13:81335961|81336014:-_chr13:81339706|81340314:-","UN_LINC00564_UP_LS0012","LINC00564","lncRNA gene","no",3.58,0,0,0.015,142,0,0,"0(0)","BLCA;LIHC;TGCT","no","NA","NA","NA","NA"]
["chr13:85696229|85738837:+","chr13:85666584|85666760:+_chr13:85676530|85676613:+_chr13:85696134|85696229:+_chr13:85738837|85738905:+_chr13:85877022|85878861:+","UN_AL356413.1_LS0001","AL356413.1","lncRNA gene","no",5.97,0,0,0.014,131,0,0,"0(0)","KICH;LUSC","no","TE_intersect_:85695938|chr13|85695938|85696311|THE1C:ERVL-MaLR:LTR|111|+","TE_intersect_:85738625|chr13|85738625|85739189|Tigger3b:TcMar-Tigger:DNA|115|+","NA","NA"]
["chr13:86170890|86186619:+","chr13:85666588|85666760:+_chr13:85676530|85676613:+_chr13:85696134|85696229:+_chr13:86060780|86060860:+_chr13:86170845|86170890:+_chr13:86186619|86186742:+_chr13:86188173|86191027:+","UN_DDX6P2_UP_LS0002","DDX6P2","pseudogene","no",4.4,0,0,0.003,29,0,0,"0(0)","KICH","no","NA","TE_intersect_:86185535|chr13|86185535|86188371|HUERS-P2-int:ERV1:LTR|165|+","NA","NA"]
["chr13:87855057|87872656:+","chr13:87854612|87855057:+_chr13:87872656|87872889:+_chr13:87875581|87875949:+","UN_AL354896.1_UP_LS0002","AL354896.1","lncRNA gene","no",2.73,0,0,0.006,56,0,0,"0(0)","TGCT","no","TE_intersect_:87855018|chr13|87855018|87855284|LTR50:ERVL:LTR|237|+","NA","NA","NA"]
["chr13:90299567|90300440:+","chr13:90287358|90287743:+_chr13:90291241|90291413:+_chr13:90299521|90299567:+_chr13:90300440|90300931:+","UN_LINC01049_UP_LS0005","LINC01049","lncRNA gene","no",7.37,0,0,0.016,151,0,0,"0(0)","OV;UCEC;UCS","no","NA","TE_intersect_:90300424|chr13|90300424|90300560|FLAM_A:Alu:SINE|191|-","NA","NA"]
["chr13:92710350|92722077:-","chr13:92701389|92701647:-_chr13:92705961|92706059:-_chr13:92709489|92709573:-_chr13:92710314|92710350:-_chr13:92722077|92722192:-_chr13:92723135|92723196:-_chr13:92739612|92739704:-_chr13:92938946|92939103:-","UN_GPC5_LS0045","GPC5","protein coding gene","yes",9.35,0,0,0.003,24,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr13:92721614|92866282","intron_intersect_chr13:92709573|92719908"]
["chr13:95234834|95246085:-","chr13:95095944|95096179:-_chr13:95115922|95116001:-_chr13:95161189|95161335:-_chr13:95163122|95163216:-_chr13:95163610|95163647:-_chr13:95164378|95164518:-_chr13:95166158|95166367:-_chr13:95170532|95170628:-_chr13:95177707|95177793:-_chr13:95177997|95178091:-_chr13:95186701|95186892:-_chr13:95188453|95188542:-_chr13:95194836|95194937:-_chr13:95206532|95206781:-_chr13:95207800|95207925:-_chr13:95209434|95209597:-_chr13:95210692|95210781:-_chr13:95217820|95218011:-_chr13:95234610|95234834:-_chr13:95246085|95246449:-","UN_ABCC4_LS0063","ABCC4","protein coding gene","no",16.64,0,0,0.004,34,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr13:95234834|95246975","intron_intersect_chr13:95234834|95246975"]
["chr13:96927358|96927852:+","chr13:96926632|96927358:+_chr13:96927852|96928597:+","UN_AL353581.1_UP_LS0005","AL353581.1","lncRNA gene","no",2,0,0,0.004,40,0,0,"0(0)","THCA","no","TE_intersect_:96927259|chr13|96927259|96927464|MER90a:ERV1:LTR|246|+","TE_intersect_:96927769|chr13|96927769|96928110|MER90a:ERV1:LTR|246|+","NA","NA"]
["chr13:98079163|98143839:-","chr13:98061908|98062320:-_chr13:98066297|98066413:-_chr13:98066957|98067046:-_chr13:98078994|98079163:-_chr13:98143839|98143944:-","UN_FTLP8_UP_LS0028","FTLP8","pseudogene","no",0.8,0,0,0.009,89,0,0,"0(0)","THCA","no","NA","NA","intron_intersect_chr13:98143492|98159492","NA"]
["chr13:99409059|99417057:-","chr13:99402856|99409059:-_chr13:99417057|99417752:-","CCR12P_LS001","CCR12P","pseudogene","no",2.6,0,0,0.005,44,0,0,"0(0)","THYM","yes","NA","NA","NA","exon_intersect_chr13:99408405|99409062"]
["chr14:100298441|100298842:-","chr14:100295897|100298441:-_chr14:100298842|100298885:-_chr14:100306199|100306424:-","UN_SLC25A29_LS0062","SLC25A29","protein coding gene","no",4.88,0,0,0.008,73,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr14:100298598|100298885","intron_intersect_chr14:100298248|100298598"]
["chr14:100732106|100734197:-","chr14:100732003|100732106:-_chr14:100734197|100734355:-_chr14:100734414|100734491:-_chr14:100734546|100735014:-","UN_DLK1_LS0017","DLK1","protein coding gene","yes",128.28,0,0,0.002,19,0,0,"0(0)","ACC;PCPG","no","NA","NA","exon_intersect_chr14:100734149|100738224","exon_intersect_chr14:100732042|100732183"]
["chr14:100834751|100835293:+","chr14:100826148|100826217:+_chr14:100828708|100828816:+_chr14:100829034|100829749:+_chr14:100832512|100832641:+_chr14:100834632|100834751:+_chr14:100835293|100836075:+_chr14:100836167|100836300:+_chr14:100845458|100845533:+_chr14:100860691|100860970:+","MEG3_LS023","MEG3","lncRNA gene","yes",91.93,0,0,0.002,19,0,0,"0(0)","TGCT","yes","NA","NA","exon_intersect_chr14:100829034|100836300","exon_intersect_chr14:100829034|100836300"]
["chr14:101064367|101069038:+","chr14:101062099|101064367:+_chr14:101069038|101070055:+_chr14:101070442|101072558:+","UN_MEG9_LS0001","MEG9","lncRNA gene","no",4.53,0,0,0.005,51,0,0,"0(0)","ACC;TGCT","no","NA","NA","NA","NA"]
["chr14:101917947|101921984:+","chr14:101809895|101810036:+_chr14:101856686|101856885:+_chr14:101882161|101882271:+_chr14:101883257|101883349:+_chr14:101883432|101883562:+_chr14:101890237|101890296:+_chr14:101893000|101893108:+_chr14:101894507|101894560:+_chr14:101901719|101901889:+_chr14:101906402|101906529:+_chr14:101909589|101909690:+_chr14:101912401|101912473:+_chr14:101917831|101917947:+_chr14:101921984|101922042:+_chr14:101925141|101927519:+","UN_PPP2R5C_LS0082","PPP2R5C","protein coding gene","yes",2.01,0.02,0,0.008,77,0.001,1,"0(0)","DLBC","no","NA","NA","intron_intersect_chr14:101917947|101921093","intron_intersect_chr14:101921382|101925141"]
["chr14:102676479|102676519:-","chr14:102676419|102676479:-_chr14:102676519|102677172:-_chr14:102677352|102678214:-","UN_RCOR1_LS0023","RCOR1","protein coding gene","no",0.55,0,0,0.002,15,0,0,"0(0)","ESCA","no","TE_intersect_:102676049|chr14|102676049|102678243|SVA_D:SVA:Retroposon|82|-","TE_intersect_:102676049|chr14|102676049|102678243|SVA_D:SVA:Retroposon|82|-","intron_intersect_chr14:102662708|102681895","intron_intersect_chr14:102662708|102681895"]
["chr14:103131993|103132054:-","chr14:103131762|103131993:-_chr14:103132054|103132705:-","UN_TNFAIP2_LS0055","TNFAIP2","protein coding gene","no",3.22,0,0,0.015,144,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","intron_intersect_chr14:103131762|103132702","intron_intersect_chr14:103131762|103132702"]
["chr14:103529261|103530234:+","chr14:103529226|103529261:+_chr14:103530234|103530309:+_chr14:103532582|103532848:+_chr14:103534550|103536045:+","TRMT61A_LS002","TRMT61A","protein coding gene","no",5.09,0,0,0.005,44,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chr14:103529261|103529950","exon_intersect_chr14:103529950|103530309"]
["chr14:104294338|104302725:+","chr14:104293470|104293724:+_chr14:104293851|104294338:+_chr14:104302725|104305094:+","UN_CEND1P1_UP_LS0013","CEND1P1","pseudogene","no",2.25,0,0,0.001,12,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr14:104592389|104592474:+","chr14:104592047|104592389:+_chr14:104592474|104592996:+","UN_TMEM179_LS0012","TMEM179","protein coding gene","no",6.87,0,0,0.004,42,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr14:104590864|104592509","exon_intersect_chr14:104590864|104592509"]
["chr14:105481624|105482840:+","chr14:105481183|105481624:+_chr14:105482840|105483006:+_chr14:105483289|105483361:+_chr14:105486327|105486663:+_chr14:105487213|105487299:+_chr14:105488166|105488260:+_chr14:105488331|105488388:+_chr14:105488471|105488516:+_chr14:105488663|105488785:+","UN_CRIP1_UP_LS0011","CRIP1","protein coding gene","no",0.85,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr14:105625067|105742065:-","chr14:105624341|105624798:-_chr14:105624896|105625067:-_chr14:105742065|105742222:-_chr14:105742341|105742385:-_chr14:105771112|105771405:-","UN_IGHE_UP_LS0154","IGHE","no","no",1010.63,0,0,0.009,88,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr14:105741893|105742222","exon_intersect_chr14:105624896|105625225"]
["chr14:105644723|105668546:-","chr14:105624341|105624778:-_chr14:105643300|105643323:-_chr14:105643461|105643525:-_chr14:105643623|105643949:-_chr14:105644068|105644103:-_chr14:105644496|105644723:-_chr14:105668546|105668565:-_chr14:105668663|105668717:-_chr14:105741948|105742222:-_chr14:105742341|105742385:-_chr14:105742777|105743070:-_chr14:105863814|105863862:-","UN_IGHG4_UP_LS0177","IGHG4","no","no",212.15,0,0,0.002,19,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr14:105668253|105668565","exon_intersect_chr14:105644496|105644790"]
["chr14:105765415|105765499:-","chr14:105736343|105736785:-_chr14:105764843|105765415:-_chr14:105765499|105765623:-","UN_IGHG3_LS0001","IGHG3","no","no",16.3,0,0,0.001,11,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr14:105765180|105769102","intron_intersect_chr14:105765180|105769102"]
["chr14:105855519|105855586:+","chr14:105855401|105855519:+_chr14:105855586|105855818:+","UN_IGHM_LS0095","IGHM","no","no",82.9,0,0,0.006,54,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr14:105855480|105855815","exon_intersect_chr14:105855480|105855815"]
["chr14:105922344|105923015:+","chr14:105879979|105880151:+_chr14:105921063|105921258:+_chr14:105922199|105922344:+_chr14:105923015|105923122:+_chr14:105924336|105932642:+","UN_FAM30A_LS0014","FAM30A","lncRNA gene","no",6.75,0,0,0.002,18,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr14:105922344|105922541","exon_intersect_chr14:105923015|105923122"]
["chr14:106327157|106331007:-","chr14:106325238|106327157:-_chr14:106331007|106331414:-_chr14:106359450|106360324:-","UN_IGHV4-28_UP_LS0001","IGHV4-28","no","no",5.12,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","TE_intersect_:106326878|chr14|106326878|106327179|AluSp:Alu:SINE|130|+","intron_intersect_chr14:106324760|106331116","intron_intersect_chr14:106324760|106331116"]
["chr14:106537850|106592717:+","chr14:106537745|106537850:+_chr14:106592717|106592798:+_chr14:106594916|106594928:+","UN_RNA5SP389_UP_LS0167","RNA5SP389","no","no",129.45,0,0,0.004,37,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr14:106537810|106538116","exon_intersect_chr14:106592676|106592979"]
["chr14:19106940|19293141:-","chr14:19105239|19106940:-_chr14:19293141|19295921:-","UN_GRAMD4P4_UP_LS0028","GRAMD4P4","pseudogene","no",0.56,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr14:19292526|19296351","exon_intersect_chr14:19106824|19107110"]
["chr14:20408463|20425497:-","chr14:20407942|20408463:-_chr14:20425497|20429401:-_chr14:20429502|20430856:-","UN_AL355075.1_UP_LS0003","AL355075.1","lncRNA gene","no",10.44,0,0,0.002,18,0,0,"0(0)","LAML","no","NA","NA","NA","intron_intersect_chr14:20408463|20413371"]
["chr14:21383745|21391410:+","chr14:21383625|21383745:+_chr14:21391410|21391554:+","UN_AL161747.1_UP_LS0001","AL161747.1","pseudogene","no",1.55,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr14:21382975|21383769","intron_intersect_chr14:21391063|21391463"]
["chr14:21846807|21846913:+","chr14:21846537|21846807:+_chr14:21846913|21850108:+","UN_TRAV8-2_LS0001","TRAV8-2","no","no",0.94,0,0,0.002,18,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr14:21846807|21846927","intron_intersect_chr14:21846807|21846927"]
["chr14:22428633|22428925:-","chr14:22418355|22418935:-_chr14:22427689|22427822:-_chr14:22428573|22428633:-_chr14:22428925|22429096:-_chr14:22432666|22432739:-","UN_AC244502.1_LS0022","AC244502.1","lncRNA gene","no",6.38,0,0,0.009,89,0,0,"0(0)","THCA","no","NA","TE_intersect_:22428543|chr14|22428543|22428854|L2a:L2:LINE|252|-","intron_intersect_chr14:22423042|22432666","intron_intersect_chr14:22423042|22432666"]
["chr14:22815451|22822319:-","chr14:22773219|22773716:-_chr14:22773933|22774116:-_chr14:22774354|22774503:-_chr14:22775444|22775540:-_chr14:22775833|22775936:-_chr14:22776195|22776318:-_chr14:22778793|22778937:-_chr14:22779926|22780051:-_chr14:22812900|22813440:-_chr14:22815314|22815451:-_chr14:22822319|22822387:-","UN_SLC7A7_LS0035","SLC7A7","protein coding gene","no",2.13,0,0,0.006,59,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr14:22821440|22822919","exon_intersect_chr14:22815314|22816477"]
["chr14:23142841|23143116:+","chr14:23142685|23142841:+_chr14:23143116|23143253:+","UN_SLC7A8_LS0065","SLC7A8","protein coding gene","no",1.3,0,0,0.002,16,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr14:23140624|23143079","exon_intersect_chr14:23143079|23143204"]
["chr14:24054494|24054711:+","chr14:24052077|24052193:+_chr14:24053709|24053803:+_chr14:24054088|24054138:+_chr14:24054242|24054301:+_chr14:24054396|24054494:+_chr14:24054711|24054808:+_chr14:24055066|24055136:+_chr14:24055237|24055310:+_chr14:24055543|24055618:+_chr14:24055701|24055789:+_chr14:24056299|24056393:+_chr14:24056622|24056708:+_chr14:24056915|24057024:+_chr14:24057167|24057244:+_chr14:24057803|24057879:+_chr14:24057960|24058064:+_chr14:24058155|24058224:+_chr14:24058680|24058761:+_chr14:24058890|24059189:+_chr14:24059270|24059442:+_chr14:24059664|24059732:+_chr14:24059970|24060063:+_chr14:24060157|24060255:+_chr14:24060628|24060756:+_chr14:24060927|24061040:+_chr14:24061497|24061672:+_chr14:24062480|24062567:+_chr14:24062709|24062846:+_chr14:24063120|24063183:+_chr14:24063325|24063533:+_chr14:24064246|24064346:+_chr14:24064686|24064814:+_chr14:24064958|24065273:+_chr14:24065622|24065750:+_chr14:24066398|24066464:+_chr14:24066567|24066656:+_chr14:24068584|24068702:+_chr14:24068792|24068966:+_chr14:24069137|24069247:+_chr14:24069376|24069724:+","UN_CARMIL3_LS0008","CARMIL3","protein coding gene","no",1.91,0,0,0.008,75,0,0,"0(0)","LGG;PCPG","no","NA","NA","exon_intersect_chr14:24054396|24054511","exon_intersect_chr14:24054711|24054808"]
["chr14:24574322|24574365:+","chr14:24573567|24573788:+_chr14:24574252|24574322:+_chr14:24574365|24574663:+_chr14:24639903|24639929:+","UN_CTSG_LS0003","CTSG","protein coding gene","no",6.97,0,0,0.001,12,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr14:24574245|24574499","exon_intersect_chr14:24574245|24574499"]
["chr14:24994984|24995091:-","chr14:24812492|24812732:-_chr14:24819037|24819194:-_chr14:24855936|24856101:-_chr14:24857027|24857157:-_chr14:24974665|24974850:-_chr14:24994864|24994984:-_chr14:24995091|24995188:-","UN_STXBP6_LS0073","STXBP6","protein coding gene","no",2.14,0,0,0.006,60,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:24995038|chr14|24995038|24995370|MLT1A0:ERVL-MaLR:LTR|187|-","TE_intersect_:24994726|chr14|24994726|24995030|AluSx:Alu:SINE|145|+","intron_intersect_chr14:24994984|25010525","intron_intersect_chr14:24994984|25010525"]
["chr14:26817046|26820158:+","chr14:26809716|26810399:+_chr14:26812233|26812396:+_chr14:26815736|26815842:+_chr14:26816920|26817046:+_chr14:26820158|26820701:+","UN_LINC02294_LS0022","LINC02294","lncRNA gene","no",3.29,0,0,0.019,182,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr14:26817046|26818704","intron_intersect_chr14:26818780|26820522"]
["chr14:28724388|28725246:-","chr14:28722900|28724388:-_chr14:28725246|28725367:-_chr14:28729175|28729251:-_chr14:28729402|28729556:-_chr14:28738727|28738844:-_chr14:28741834|28741959:-_chr14:28762332|28762474:-_chr14:28765160|28765263:-","UN_BTF3P2_UP_LS0004","BTF3P2","pseudogene","no",1.86,0,0,0.004,37,0,0,"0(0)","LGG","no","NA","TE_intersect_:28724120|chr14|28724120|28724417|AluJr:Alu:SINE|202|+","NA","NA"]
["chr14:28881141|28929940:+","chr14:28830250|28830502:+_chr14:28832006|28832060:+_chr14:28837253|28837330:+_chr14:28881091|28881141:+_chr14:28929940|28929994:+_chr14:28968073|28968400:+","UN_LINC02327_LS0024","LINC02327","lncRNA gene","no",2.46,0,0,0.002,18,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr14:28870416|28901236","exon_intersect_chr14:28929940|28929994"]
["chr14:30418795|30473522:-","chr14:30410957|30412600:-_chr14:30418688|30418795:-_chr14:30473522|30473599:-_chr14:30474001|30474469:-","UN_AL133372.2_UP_LS0044","AL133372.2","lncRNA gene","no",3.14,0,0,0.01,99,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr14:30473522|30473599","NA"]
["chr14:31566926|31599289:+","chr14:31566711|31566926:+_chr14:31599289|31599379:+_chr14:31673355|31673394:+_chr14:31673484|31673574:+_chr14:31787780|31787873:+_chr14:31826629|31826714:+_chr14:31846471|31846591:+_chr14:31850119|31850201:+_chr14:31859118|31860273:+","UN_NUBPL_LS0018","NUBPL","protein coding gene","no",2.35,0,0,0.005,48,0,0,"0(0)","SARC","no","TE_intersect_:31566578|chr14|31566578|31566983|MLT1D:ERVL-MaLR:LTR|216|+","NA","intron_intersect_chr14:31565048|31599289","exon_intersect_chr14:31599289|31599379"]
["chr14:33963836|34092321:-","chr14:33963312|33963836:-_chr14:34092321|34092402:-_chr14:34126253|34126311:-_chr14:34127029|34127144:-_chr14:34169491|34169646:-_chr14:34199487|34199487:-","UN_EGLN3_LS0042","EGLN3","protein coding gene","yes",9.21,0.17,0,0.021,200,0.003,2,"0(0)","SKCM;UVM","no","TE_intersect_:34092157|chr14|34092157|34092385|MLT1L:ERVL-MaLR:LTR|254|-","TE_intersect_:33963707|chr14|33963707|33963863|AluSx:Alu:SINE|124|+","exon_intersect_chr14:34092317|34092402","intron_intersect_chr14:33951081|33977310"]
["chr14:35993860|35998410:+","chr14:35993614|35993860:+_chr14:35998410|35998584:+_chr14:36063684|36063817:+_chr14:36065251|36065408:+_chr14:36164120|36164266:+_chr14:36165745|36165844:+_chr14:36214924|36215058:+_chr14:36215374|36215515:+_chr14:36235324|36235608:+","UN_AL133304.3_LS0015","AL133304.3","lncRNA gene","no",2.18,0,0,0.007,69,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr14:35950044|35998410","exon_intersect_chr14:35998410|35998584"]
["chr14:36654462|36654749:+","chr14:36653792|36654462:+_chr14:36654749|36655552:+","UN_AL079303.1_LS0013","AL079303.1","lncRNA gene","no",7.04,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr14:36649437|36657568","intron_intersect_chr14:36649437|36657568"]
["chr14:40286950|40310015:-","chr14:40282486|40283509:-_chr14:40286816|40286950:-_chr14:40310015|40310099:-_chr14:40318346|40318460:-_chr14:40344290|40344301:-","UN_FBXO33_UP_LS0009","FBXO33","protein coding gene","no",2.97,0,0,0.015,148,0,0,"0(0)","ESCA;LUSC;TGCT;THYM","no","TE_intersect_:40309898|chr14|40309898|40310130|MLT1L:ERVL-MaLR:LTR|295|-","TE_intersect_:40286781|chr14|40286781|40287901|MLT1G1-int:ERVL-MaLR:LTR|278|-","NA","NA"]
["chr14:41911711|42149597:+","chr14:41911278|41911711:+_chr14:42149597|42149695:+_chr14:42362906|42363000:+_chr14:42394945|42395094:+","UN_AL442163.1_UP_LS0005","AL442163.1","lncRNA gene","no",3.92,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","TE_intersect_:42149422|chr14|42149422|42149598|L1MCa:L1:LINE|276|-","NA","NA"]
["chr14:45237721|45241833:-","chr14:45227687|45227814:-_chr14:45231141|45231298:-_chr14:45232509|45232627:-_chr14:45232733|45232820:-_chr14:45235814|45235944:-_chr14:45237648|45237721:-_chr14:45241833|45242386:-","UN_MIS18BP1_LS0017","MIS18BP1","protein coding gene","no",1.86,0,0,0.005,48,0,0,"0(0)","LAML","no","TE_intersect_:45241753|chr14|45241753|45241869|MIRc:MIR:SINE|368|-","NA","exon_intersect_chr14:45241468|45241870","intron_intersect_chr14:45237721|45241468"]
["chr14:48395111|48400480:-","chr14:48394616|48395111:-_chr14:48400480|48400557:-_chr14:48427464|48427524:-_chr14:48429186|48429243:-_chr14:48556105|48556174:-_chr14:48557358|48557491:-_chr14:48736389|48736468:-_chr14:48788869|48788954:-","UN_RNU6-297P_UP_LS0003","RNU6-297P","small non-coding RNA gene","no",3.46,0,0,0.003,26,0,0,"0(0)","ACC;MESO","no","NA","NA","exon_intersect_chr14:48400480|48400557","NA"]
["chr14:50901911|50904074:+","chr14:50893582|50895722:+_chr14:50901829|50901911:+_chr14:50904074|50904192:+_chr14:50904339|50904967:+","ABHD12B_LS022","ABHD12B","protein coding gene","no",6.04,0,0,0.011,103,0,0,"0(0)","COAD;READ","yes","NA","NA","intron_intersect_chr14:50901911|50903389","exon_intersect_chr14:50904006|50904192"]
["chr14:52621501|52622100:+","chr14:52619893|52621501:+_chr14:52622100|52622237:+_chr14:52632160|52632309:+_chr14:52633530|52633655:+_chr14:52633828|52633946:+_chr14:52634938|52637639:+","UN_GPR137C_LS0017","GPR137C","protein coding gene","no",1.64,0,0,0.011,103,0,0,"0(0)","LGG;OV","no","TE_intersect_:52619959|chr14|52619959|52621752|L1ME2z:L1:LINE|251|+","TE_intersect_:52621752|chr14|52621752|52623819|Charlie1:hAT-Charlie:DNA|182|-","intron_intersect_chr14:52613718|52632160","intron_intersect_chr14:52613718|52632160"]
["chr14:54411866|54415899:+","chr14:54397003|54397077:+_chr14:54401524|54401579:+_chr14:54408745|54408789:+_chr14:54411484|54411866:+_chr14:54415899|54415930:+_chr14:54417848|54417951:+","UN_CDKN3_LS0014","CDKN3","protein coding gene","yes",25.49,0,0,0.015,142,0,0,"0(0)","CESC;DLBC;LUSC","no","TE_intersect_:54411789|chr14|54411789|54411896|MIRb:MIR:SINE|216|+","NA","intron_intersect_chr14:54411706|54412835","exon_intersect_chr14:54415899|54415930"]
["chr14:55130430|55146446:-","chr14:55129408|55130430:-_chr14:55146446|55148473:-_chr14:55150799|55150848:-_chr14:55151695|55151941:-_chr14:55152590|55152647:-_chr14:55154617|55154806:-_chr14:55158522|55158741:-_chr14:55162971|55163075:-_chr14:55169399|55169559:-_chr14:55170702|55170787:-_chr14:55175346|55175472:-_chr14:55175894|55176018:-_chr14:55177062|55177336:-_chr14:55179629|55179699:-_chr14:55180656|55180778:-_chr14:55181213|55181297:-_chr14:55182370|55182432:-_chr14:55183560|55183753:-_chr14:55188942|55189180:-_chr14:55191463|55191604:-","UN_WDHD1_UP_LS0017","WDHD1","protein coding gene","no",0.66,0,0,0.004,34,0,0,"0(0)","TGCT","no","TE_intersect_:55146307|chr14|55146307|55146714|LTR16A:ERVL:LTR|238|-","NA","NA","intron_intersect_chr14:55129300|55137188"]
["chr14:57320696|57336316:-","chr14:57291746|57291919:-_chr14:57320259|57320395:-_chr14:57320605|57320696:-_chr14:57336316|57336453:-_chr14:57343976|57344118:-","UN_EXOC5_UP_LS0012","EXOC5","protein coding gene","no",2.89,0.01,0,0.043,415,0.001,1,"0(0)","BLCA;LUAD;LUSC;THYM","no","NA","NA","NA","NA"]
["chr14:58948341|59183663:+","chr14:58913673|58913861:+_chr14:58948313|58948341:+_chr14:59183663|59184251:+","UN_DAAM1_UP_LS0002","DAAM1","protein coding gene","no",3.37,0,0,0.002,15,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr14:58948341|59009031","NA"]
["chr14:60652273|60652399:+","chr14:60652236|60652273:+_chr14:60652399|60652539:+_chr14:60654722|60656766:+","UN_SIX1_LS0013","SIX1","protein coding gene","yes",0.88,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr14:60651775|60653131","exon_intersect_chr14:60651775|60653131"]
["chr14:63046758|63048826:+","chr14:63045455|63045782:+_chr14:63046455|63046758:+_chr14:63048826|63054752:+","UN_KCNH5_LS0007","KCNH5","protein coding gene","no",7.92,0,0,0.001,11,0,0,"0(0)","UCS","no","TE_intersect_:63046605|chr14|63046605|63046774|MER5A:hAT-Charlie:DNA|233|+","NA","intron_intersect_chr14:63045455|63101800","intron_intersect_chr14:63045455|63101800"]
["chr14:64704704|64723522:+","chr14:64704597|64704704:+_chr14:64723522|64723921:+_chr14:64727593|64727756:+","UN_PLEKHG3_LS0002","PLEKHG3","protein coding gene","no",0.84,0,0,0.001,13,0,0,"0(0)","ESCA","no","NA","TE_intersect_:64723497|chr14|64723497|64723800|AluSx1:Alu:SINE|116|-","intron_intersect_chr14:64704704|64715703","intron_intersect_chr14:64716092|64723781"]
["chr14:64972100|64972695:-","chr14:64945816|64948512:-_chr14:64948668|64948733:-_chr14:64950325|64950414:-_chr14:64951074|64951151:-_chr14:64951603|64951663:-_chr14:64952511|64952571:-_chr14:64971953|64972100:-_chr14:64972695|64972776:-","RAB15_LS018","RAB15","protein coding gene","no",1.1,0,0,0.003,26,0,0,"0(0)","TGCT","yes","NA","NA","intron_intersect_chr14:64972414|64972710","exon_intersect_chr14:64971953|64972414"]
["chr14:68285486|68291884:+","chr14:68285402|68285486:+_chr14:68291884|68291980:+_chr14:68411424|68411527:+_chr14:68468172|68468250:+_chr14:68594485|68595996:+","UN_RAD51B_LS0073","RAD51B","protein coding gene","no",0.83,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr14:68236539|68291884","exon_intersect_chr14:68291884|68291980"]
["chr14:69257301|69260269:-","chr14:69238399|69239380:-_chr14:69257054|69257301:-_chr14:69260269|69260550:-","UN_AL359317.1_LS0006","AL359317.1","lncRNA gene","no",1.68,0,0,0.006,54,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr14:69259964|69260467","intron_intersect_chr14:69257301|69259277"]
["chr14:71910652|71915876:+","chr14:71848606|71848736:+_chr14:71908165|71908434:+_chr14:71910574|71910652:+_chr14:71915876|71916030:+_chr14:71928283|71928955:+","UN_RGS6_UP_LS0017","RGS6","protein coding gene","no",3.05,0,0,0.03,284,0,0,"0(0)","BLCA;ESCA;LUAD;LUSC;OV;READ;STAD","no","NA","TE_intersect_:71915695|chr14|71915695|71916097|MLT1B:ERVL-MaLR:LTR|155|+","NA","NA"]
["chr14:74325762|74326061:-","chr14:74325359|74325762:-_chr14:74326061|74326220:-_chr14:74327571|74327673:-_chr14:74349764|74349924:-","UN_VRTN_LS0006","VRTN","protein coding gene","no",4.99,0,0,0.006,53,0,0,"0(0)","STAD;TGCT","no","TE_intersect_:74325903|chr14|74325903|74326137|MIRb:MIR:SINE|247|-","TE_intersect_:74325525|chr14|74325525|74325799|AluJo:Alu:SINE|131|+","intron_intersect_chr14:74306063|74337723","intron_intersect_chr14:74306063|74337723"]
["chr14:74916673|74918513:-","chr14:74914853|74916673:-_chr14:74918513|74918605:-_chr14:74919845|74919969:-_chr14:74921277|74921561:-_chr14:74921978|74922485:-_chr14:74923180|74923245:-","UN_RPS6KL1_LS0004","RPS6KL1","protein coding gene","no",1.95,0,0,0.003,32,0,0,"0(0)","STAD","no","NA","TE_intersect_:74916406|chr14|74916406|74916695|AluJb:Alu:SINE|125|+","exon_intersect_chr14:74918513|74918605","intron_intersect_chr14:74911841|74918513"]
["chr14:75280885|75280960:-","chr14:75280553|75280885:-_chr14:75280960|75281267:-","UN_FOS_LS0065","FOS","protein coding gene","yes",12.19,0,0,0.005,51,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr14:75279643|75282230","exon_intersect_chr14:75279643|75282230"]
["chr14:76601592|76705897:-","chr14:76474378|76476840:-_chr14:76502157|76502260:-_chr14:76601477|76601592:-_chr14:76705897|76706334:-","UN_AC008050.1_LS0014","AC008050.1","lncRNA gene","no",9.89,0,0,0.003,32,0,0,"0(0)","TGCT","no","TE_intersect_:76705632|chr14|76705632|76705904|Tigger3:TcMar-Tigger:DNA|107|-","TE_intersect_:76601394|chr14|76601394|76601808|MSTA:ERVL-MaLR:LTR|131|-","intron_intersect_chr14:76690742|76710658","intron_intersect_chr14:76601592|76633714"]
["chr14:77570508|77575732:-","chr14:77505997|77512403:-_chr14:77518038|77518167:-_chr14:77521446|77552222:-_chr14:77555300|77555519:-_chr14:77557041|77557146:-_chr14:77562396|77562489:-_chr14:77565732|77565815:-_chr14:77570384|77570508:-_chr14:77575732|77576915:-_chr14:77578955|77579109:-_chr14:77597186|77597321:-","UN_SPTLC2_LS0028","SPTLC2","protein coding gene","no",2.67,0,0,0.005,44,0,0,"0(0)","LAML","no","TE_intersect_:77575539|chr14|77575539|77575831|AluJr:Alu:SINE|181|-","NA","intron_intersect_chr14:77570508|77576767","intron_intersect_chr14:77570508|77576767"]
["chr14:80755296|80787971:+","chr14:80755082|80755296:+_chr14:80787971|80788035:+_chr14:80833912|80836204:+","UN_CEP128_LS0030","CEP128","protein coding gene","no",3.43,0,0,0.007,66,0,0,"0(0)","HNSC","no","TE_intersect_:80754935|chr14|80754935|80755378|MLT2A1:ERVL:LTR|77|+","NA","intron_intersect_chr14:80743267|80756892","intron_intersect_chr14:80785545|80792760"]
["chr14:83246207|83268898:+","chr14:83246107|83246207:+_chr14:83268898|83269176:+_chr14:83281877|83282066:+_chr14:83286811|83286916:+_chr14:83289537|83289576:+_chr14:83303810|83303885:+_chr14:83306730|83307785:+","UN_RNU6ATAC28P_UP_LS0019","RNU6ATAC28P","small non-coding RNA gene","no",22.3,0,0,0.001,12,0,0,"0(0)","LAML","no","TE_intersect_:83245896|chr14|83245896|83246289|MSTA:ERVL-MaLR:LTR|163|+","TE_intersect_:83268876|chr14|83268876|83269173|AluJb:Alu:SINE|172|-","NA","NA"]
["chr14:85405980|85407499:-","chr14:85395037|85397179:-_chr14:85398149|85398331:-_chr14:85405917|85405980:-_chr14:85407499|85407660:-_chr14:85430066|85430224:-","UN_LINC00911_LS0002","LINC00911","lncRNA gene","no",8.75,0,0,0.02,191,0,0,"0(0)","ESCA;HNSC;LUSC;SARC","no","NA","NA","intron_intersect_chr14:85405980|85407903","intron_intersect_chr14:85405980|85407903"]
["chr14:86028458|86070863:+","chr14:85934604|85934861:+_chr14:85978970|85979100:+_chr14:86028369|86028458:+_chr14:86070863|86070967:+_chr14:86127950|86128116:+_chr14:86129496|86130623:+","UN_LINC02328_LS0037","LINC02328","lncRNA gene","no",1.54,0,0,0.004,41,0,0,"0(0)","THYM","no","TE_intersect_:86028054|chr14|86028054|86028774|MER49:ERV1:LTR|222|-","NA","intron_intersect_chr14:86015049|86031136","exon_intersect_chr14:86070754|86070967"]
["chr14:89348398|89350672:-","chr14:89345640|89348398:-_chr14:89350672|89350791:-","UN_FOXN3_LS0039","FOXN3","protein coding gene","no",2.18,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr14:89350672|89350808","intron_intersect_chr14:89333259|89349533"]
["chr14:90451902|90458596:+","chr14:90451620|90451902:+_chr14:90458596|90459178:+","UN_AL096869.1_UP_LS0001","AL096869.1","lncRNA gene","no",3.99,0,0,0.003,28,0,0,"0(0)","PCPG","no","NA","NA","NA","exon_intersect_chr14:90458596|90458905"]
["chr14:91222354|91223679:+","chr14:91222235|91222354:+_chr14:91223679|91224939:+_chr14:91225108|91225315:+","UN_DGLUCY_LS0078","DGLUCY","protein coding gene","no",4.25,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr14:91220766|91223679","exon_intersect_chr14:91223679|91223795"]
["chr14:92907172|92917232:-","chr14:92905697|92906666:-_chr14:92907069|92907172:-_chr14:92917232|92917336:-","UN_LGMN_UP_LS0023","LGMN","protein coding gene","no",3.33,0,0,0.001,12,0,0,"0(0)","PCPG","no","NA","NA","NA","exon_intersect_chr14:92907069|92907482"]
["chr14:93430866|93467671:+","chr14:93430053|93430866:+_chr14:93467671|93467791:+_chr14:93474089|93474393:+_chr14:93477558|93477728:+_chr14:93487663|93487755:+_chr14:93496411|93496466:+_chr14:93497157|93497286:+_chr14:93523978|93524042:+_chr14:93528558|93528646:+_chr14:93529286|93529326:+_chr14:93532550|93532578:+_chr14:93537989|93538218:+_chr14:93540660|93540831:+_chr14:93542466|93542696:+_chr14:93571894|93572084:+_chr14:93572693|93572816:+_chr14:93575058|93575198:+_chr14:93577842|93578063:+_chr14:93580149|93580376:+_chr14:93582203|93582344:+_chr14:93586596|93586675:+_chr14:93586760|93586908:+_chr14:93593680|93593837:+_chr14:93597359|93597540:+_chr14:93600569|93600770:+_chr14:93603239|93603418:+_chr14:93604896|93604961:+_chr14:93612797|93613083:+_chr14:93617122|93617304:+_chr14:93618192|93618354:+_chr14:93620892|93621041:+_chr14:93621777|93622841:+_chr14:93630801|93630908:+_chr14:93634521|93634637:+_chr14:93637216|93637299:+_chr14:93641145|93641247:+_chr14:93643557|93643697:+_chr14:93646608|93646646:+_chr14:93653742|93653854:+_chr14:93653940|93654025:+_chr14:93655234|93655407:+_chr14:93659193|93659261:+_chr14:93662604|93662714:+_chr14:93673351|93673455:+_chr14:93682617|93682694:+_chr14:93686572|93686661:+_chr14:93688665|93688840:+_chr14:93690117|93690303:+_chr14:93691749|93691946:+_chr14:93694335|93694412:+_chr14:93704625|93704666:+_chr14:93706704|93707343:+","UN_UNC79_LS0008","UNC79","protein coding gene","no",1.04,0,0,0.016,153,0,0,"0(0)","LGG;PCPG","no","NA","NA","exon_intersect_chr14:93430337|93431051","exon_intersect_chr14:93467671|93467791"]
["chr14:93983773|93989133:-","chr14:93983081|93983773:-_chr14:93989133|93989198:-_chr14:93989869|93990091:-","UN_ASB2_UP_LS0004","ASB2","protein coding gene","no",7.42,0,0,0.001,13,0,0,"0(0)","ACC","no","NA","NA","NA","NA"]
["chr14:96086762|96091724:+","chr14:96086518|96086762:+_chr14:96091724|96093859:+","UN_C14orf132_LS0009","C14orf132","protein coding gene","no",0.94,0,0,0.003,27,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr14:96086511|96094080","exon_intersect_chr14:96086511|96094080"]
["chr14:98139310|98162446:+","chr14:98136074|98136197:+_chr14:98138993|98139310:+_chr14:98162446|98163060:+","UN_AL163932.1_LS0005","AL163932.1","lncRNA gene","no",1.95,0,0,0.006,53,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr14:98139242|98205023","intron_intersect_chr14:98139242|98205023"]
["chr15:100226629|100254136:-","chr15:100224597|100226629:-_chr15:100254136|100254179:-_chr15:100261479|100261636:-_chr15:100262352|100262387:-","UN_ADAMTS17_LS0030","ADAMTS17","protein coding gene","no",1.56,0,0,0.002,15,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr15:100254136|100254179","intron_intersect_chr15:100199423|100254136"]
["chr15:101300869|101305106:-","chr15:101297142|101300869:-_chr15:101305106|101305355:-_chr15:101307213|101307325:-_chr15:101313376|101313505:-_chr15:101318319|101318422:-_chr15:101322520|101322607:-_chr15:101324850|101325046:-_chr15:101326377|101326479:-_chr15:101331651|101331689:-_chr15:101331852|101332031:-_chr15:101366196|101366332:-_chr15:101370335|101370488:-","UN_PCSK6_LS0003","PCSK6","protein coding gene","no",12.89,0,0,0.004,40,0,0,"0(0)","THYM","no","NA","TE_intersect_:101300695|chr15|101300695|101300905|MER20:hAT-Charlie:DNA|129|-","exon_intersect_chr15:101303928|101305355","exon_intersect_chr15:101297142|101301648"]
["chr15:101606035|101626448:-","chr15:101602768|101606035:-_chr15:101626448|101626988:-","UN_AC090164.1_UP_LS0005","AC090164.1","pseudogene","no",1.97,0,0,0.032,302,0,0,"0(0)","ESCA;HNSC;LUSC;STAD","no","NA","TE_intersect_:101605947|chr15|101605947|101606120|MER117:hAT-Charlie:DNA|285|+","exon_intersect_chr15:101626448|101626563","NA"]
["chr15:21252566|21262567:-","chr15:21252476|21252566:-_chr15:21262567|21262940:-","UN_AC126335.1_UP_LS0009","AC126335.1","lncRNA gene","no",3.22,0,0,0.013,125,0,0,"0(0)","PCPG;TGCT;THYM","no","NA","NA","NA","intron_intersect_chr15:21250296|21257313"]
["chr15:22577555|22579413:+","chr15:22494914|22494955:+_chr15:22495570|22495672:+_chr15:22516876|22516990:+_chr15:22534068|22534243:+_chr15:22537438|22537608:+_chr15:22537993|22538096:+_chr15:22539097|22539247:+_chr15:22541995|22542209:+_chr15:22542483|22542615:+_chr15:22542723|22542850:+_chr15:22542943|22543138:+_chr15:22545767|22545900:+_chr15:22546430|22546600:+_chr15:22546678|22546820:+_chr15:22546938|22547089:+_chr15:22547881|22548072:+_chr15:22554385|22554572:+_chr15:22556012|22556204:+_chr15:22556910|22557092:+_chr15:22559789|22559970:+_chr15:22560788|22561454:+_chr15:22561559|22561789:+_chr15:22561896|22562731:+_chr15:22562949|22563087:+_chr15:22564389|22564532:+_chr15:22569149|22569291:+_chr15:22572929|22573181:+_chr15:22573279|22573415:+_chr15:22573975|22574073:+_chr15:22577159|22577332:+_chr15:22577430|22577555:+_chr15:22579413|22579477:+_chr15:22579584|22579723:+_chr15:22587344|22587391:+_chr15:22587496|22590823:+","UN_HERC2P2_LS0102","HERC2P2","pseudogene","no",2,0,0,0.012,114,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr15:22577555|22579348","exon_intersect_chr15:22579348|22579477"]
["chr15:24088176|24088486:+","chr15:23975172|23975255:+_chr15:23976147|23976243:+_chr15:23979071|23979211:+_chr15:24087733|24087830:+_chr15:24088080|24088176:+_chr15:24088486|24088607:+_chr15:24090080|24090817:+","UN_AC087463.1_UP_LS0004","AC087463.1","lncRNA gene","no",2.97,0,0,0.004,43,0,0,"0(0)","PCPG","no","TE_intersect_:24088176|chr15|24088176|24088453|ERVL-B4-int:ERVL:LTR|265|-","TE_intersect_:24088453|chr15|24088453|24088628|FRAM:Alu:SINE|229|-","NA","NA"]
["chr15:28081895|28099095:-","chr15:27754875|27755472:-_chr15:27844959|27845052:-_chr15:27851382|27851475:-_chr15:27871154|27871258:-_chr15:27871863|27871922:-_chr15:27926127|27926254:-_chr15:27951784|27951892:-_chr15:27955158|27955215:-_chr15:27957588|27957735:-_chr15:27966690|27966822:-_chr15:27983345|27983483:-_chr15:27985064|27985188:-_chr15:27986587|27986643:-_chr15:27989601|27989666:-_chr15:27990576|27990647:-_chr15:28014776|28014929:-_chr15:28016104|28016186:-_chr15:28018397|28018557:-_chr15:28022501|28022573:-_chr15:28024845|28024902:-_chr15:28027871|28028059:-_chr15:28032065|28032163:-_chr15:28081648|28081895:-_chr15:28099095|28099293:-","UN_OCA2_LS0061","OCA2","protein coding gene","no",0.67,0,0,0.002,22,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr15:28081895|28099111","intron_intersect_chr15:28081895|28099111"]
["chr15:28832573|28833276:+","chr15:28832380|28832573:+_chr15:28833276|28833378:+_chr15:28838688|28838822:+_chr15:28846739|28846836:+_chr15:28851465|28852903:+","UN_PDCD6IPP2_LS0024","PDCD6IPP2","pseudogene","no",1.52,0,0,0.005,47,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr15:28832460|28833276","exon_intersect_chr15:28833276|28833378"]
["chr15:30813162|30813276:+","chr15:30812515|30813162:+_chr15:30813276|30815909:+","UN_HERC2P10_UP_LS0003","HERC2P10","pseudogene","no",1.56,0,0,0.003,26,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr15:31377143|31377356:-","chr15:31376971|31377143:-_chr15:31377356|31377511:-","UN_KLF13_LS0107","KLF13","protein coding gene","no",1.54,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr15:31372010|31377899","exon_intersect_chr15:31372010|31377899"]
["chr15:32573810|32611993:+","chr15:32573772|32573810:+_chr15:32611993|32614438:+","UN_AC123768.2_UP_LS0001","AC123768.2","lncRNA gene","no",4.79,0,0,0.002,17,0,0,"0(0)","THYM","no","TE_intersect_:32573665|chr15|32573665|32573965|AluY:Alu:SINE|87|-","TE_intersect_:32611865|chr15|32611865|32612141|AluSx:Alu:SINE|91|-","intron_intersect_chr15:32537006|32575571","intron_intersect_chr15:32607310|32613733"]
["chr15:35246190|35254746:+","chr15:35246014|35246190:+_chr15:35254746|35255063:+","UN_DPH6_LS0011","DPH6","protein coding gene","no",3.67,0,0,0.003,30,0,0,"0(0)","ESCA","no","TE_intersect_:35245892|chr15|35245892|35246256|LTR7:ERV1:LTR|69|+","TE_intersect_:35254666|chr15|35254666|35255102|LTR7Y:ERV1:LTR|16|-","intron_intersect_chr15:35238197|35282596","intron_intersect_chr15:35238197|35282596"]
["chr15:38727709|38729737:-","chr15:38725502|38727709:-_chr15:38729737|38729902:-_chr15:38730276|38730437:-_chr15:38731185|38731492:-_chr15:38732007|38732514:-_chr15:38750915|38751152:-","UN_C15orf53_LS0019","C15orf53","protein coding gene","no",4.56,0,0,0.004,37,0,0,"0(0)","OV;UCS","no","TE_intersect_:38729654|chr15|38729654|38730180|MLT2B2:ERVL:LTR|195|-","NA","NA","NA"]
["chr15:40106438|40106891:-","chr15:40087893|40091888:-_chr15:40104180|40104340:-_chr15:40105795|40106091:-_chr15:40106358|40106438:-_chr15:40106891|40106922:-","UN_BMF_LS0037","BMF","protein coding gene","yes",0.69,0,0,0.003,24,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr15:40106645|40108043","exon_intersect_chr15:40106305|40106448"]
["chr15:41311822|41312233:-","chr15:41309268|41311822:-_chr15:41312233|41321148:-","UN_AC087721.2_LS0079","AC087721.2","protein coding gene","no",2.82,0,0,0.004,37,0,0,"0(0)","LAML","no","TE_intersect_:41312153|chr15|41312153|41312458|AluSp:Alu:SINE|121|-","TE_intersect_:41311582|chr15|41311582|41311865|AluSg4:Alu:SINE|109|-","intron_intersect_chr15:41309849|41313273","intron_intersect_chr15:41309849|41313273"]
["chr15:42191372|42191496:-","chr15:42161724|42161773:-_chr15:42162032|42162166:-_chr15:42162332|42162481:-_chr15:42163350|42163395:-_chr15:42163626|42163728:-_chr15:42164358|42164486:-_chr15:42164996|42165113:-_chr15:42165718|42165816:-_chr15:42166159|42166232:-_chr15:42166563|42166649:-_chr15:42166772|42166913:-_chr15:42167394|42167537:-_chr15:42169724|42169866:-_chr15:42173723|42173852:-_chr15:42178218|42178338:-_chr15:42178450|42178570:-_chr15:42184517|42184700:-_chr15:42187271|42187363:-_chr15:42187758|42187856:-_chr15:42189114|42189208:-_chr15:42191125|42191372:-_chr15:42191496|42191560:-_chr15:42199896|42199961:-_chr15:42208081|42208307:-","UN_VPS39_LS0048","VPS39","protein coding gene","no",2.41,0,0,0.006,56,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr15:42191261|42191560","exon_intersect_chr15:42191261|42191560"]
["chr15:43801864|43863555:+","chr15:43800627|43800784:+_chr15:43801132|43801187:+_chr15:43801518|43801569:+_chr15:43801711|43801864:+_chr15:43863555|43863574:+","UN_GAPDHP55_UP_LS0007","GAPDHP55","pseudogene","no",1.51,0,0,0.011,104,0,0,"0(0)","ESCA","no","NA","TE_intersect_:43863237|chr15|43863237|43863577|L1MA8:L1:LINE|146|-","exon_intersect_chr15:43801132|43803043","intron_intersect_chr15:43861386|43863893"]
["chr15:45959021|45962283:-","chr15:45958742|45959021:-_chr15:45962283|45962509:-_chr15:45964451|45964568:-","UN_AC090527.3_UP_LS0011","AC090527.3","lncRNA gene","no",3.92,0,0,0.003,27,0,0,"0(0)","PRAD","no","TE_intersect_:45962181|chr15|45962181|45962514|LTR16C:ERVL:LTR|308|-","NA","NA","NA"]
["chr15:46791368|46802258:+","chr15:46410177|46410353:+_chr15:46731242|46731292:+_chr15:46791282|46791368:+_chr15:46802258|46802420:+_chr15:46804641|46811620:+","UN_AC073941.1_LS0006","AC073941.1","lncRNA gene","no",2.34,0,0,0.013,122,0,0,"0(0)","LGG","no","TE_intersect_:46790895|chr15|46790895|46792375|L1MD2:L1:LINE|289|+","TE_intersect_:46801915|chr15|46801915|46802398|LTR33:ERVL:LTR|338|-","intron_intersect_chr15:46720512|46804641","intron_intersect_chr15:46720512|46804641"]
["chr15:46802420|46804641:+","chr15:46410177|46410353:+_chr15:46731242|46731292:+_chr15:46791282|46791368:+_chr15:46802258|46802420:+_chr15:46804641|46811620:+","UN_AC073941.1_LS0009","AC073941.1","lncRNA gene","no",1.93,0,0,0.006,53,0,0,"0(0)","LGG","no","NA","TE_intersect_:46804624|chr15|46804624|46806609|L1PA17:L1:LINE|133|+","intron_intersect_chr15:46720512|46804641","exon_intersect_chr15:46804641|46804844"]
["chr15:50357822|50359899:+","chr15:50356471|50357822:+_chr15:50359899|50372202:+","UN_GABPB1-AS1_LS0022","GABPB1-AS1","lncRNA gene","no",3.93,0,0,0.003,24,0,0,"0(0)","LAML","no","TE_intersect_:50357697|chr15|50357697|50357948|L2a:L2:LINE|291|-","TE_intersect_:50359607|chr15|50359607|50359920|AluSp:Alu:SINE|99|-","exon_intersect_chr15:50356100|50372202","exon_intersect_chr15:50356100|50372202"]
["chr15:52083663|52086317:+","chr15:52072077|52072159:+_chr15:52080129|52083663:+_chr15:52086317|52086580:+","UN_AC023906.5_LS0022","AC023906.5","lncRNA gene","no",2.85,0,0,0.011,106,0,0,"0(0)","HNSC;LUSC","no","NA","TE_intersect_:52086083|chr15|52086083|52086642|LTR26:ERV1:LTR|137|+","intron_intersect_chr15:52082354|52083983","exon_intersect_chr15:52086317|52086574"]
["chr15:56156581|56159768:+","chr15:56019234|56019568:+_chr15:56156516|56156581:+_chr15:56159768|56159837:+_chr15:56162133|56162240:+_chr15:56193212|56193373:+","UN_RFX7_LS0033","RFX7","protein coding gene","no",3.1,0,0,0.023,222,0,0,"0(0)","CESC;ESCA;HNSC;MESO","no","TE_intersect_:56156432|chr15|56156432|56156848|L1ME3Cz:L1:LINE|270|-","NA","intron_intersect_chr15:56144483|56160716","intron_intersect_chr15:56144483|56160716"]
["chr15:56159837|56162133:+","chr15:56019234|56019568:+_chr15:56156516|56156581:+_chr15:56159768|56159837:+_chr15:56162133|56162240:+_chr15:56193212|56193373:+","UN_RFX7_LS0037","RFX7","protein coding gene","no",2.97,0,0,0.021,199,0,0,"0(0)","CESC;HNSC","no","NA","NA","intron_intersect_chr15:56144483|56160716","intron_intersect_chr15:56160747|56179059"]
["chr15:56651922|56657093:+","chr15:56648469|56648594:+_chr15:56651833|56651922:+_chr15:56657093|56658347:+","UN_ZNF280D_LS0020","ZNF280D","protein coding gene","no",3.89,0,0,0.004,39,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr15:56645339|56652490","intron_intersect_chr15:56654842|56658424"]
["chr15:59688576|59689063:+","chr15:59687506|59688576:+_chr15:59689063|59689385:+","UN_BNIP2_LS0013","BNIP2","protein coding gene","no",2.71,0,0,0.01,97,0,0,"0(0)","ESCA;LAML;OV;STAD","no","NA","NA","intron_intersect_chr15:59688576|59688732","intron_intersect_chr15:59688926|59689077"]
["chr15:62242437|62242463:-","chr15:62241728|62242437:-_chr15:62242463|62242945:-_chr15:62243033|62243180:-_chr15:62243264|62243366:-_chr15:62243438|62243539:-_chr15:62243626|62244595:-","UN_AC126323.1_LS0004","AC126323.1","pseudogene","no",4.81,0,0,0.007,65,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr15:62234812|62242751","intron_intersect_chr15:62234812|62242751"]
["chr15:63916257|63916576:-","chr15:63908253|63908600:-_chr15:63911908|63911991:-_chr15:63912108|63916257:-_chr15:63916576|63918576:-_chr15:63919785|63924227:-_chr15:63924816|63924861:-_chr15:63925941|63926093:-_chr15:63929551|63929577:-_chr15:63930407|63930455:-_chr15:63939232|63939361:-_chr15:63942864|63942995:-","UN_DAPK2_LS0022","DAPK2","protein coding gene","yes",6.79,0,0,0.003,31,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr15:64866039|64866112:-","chr15:64865975|64866039:-_chr15:64866112|64866282:-","UN_AC069368.1_LS0030","AC069368.1","protein coding gene","no",2.43,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr15:64864899|64868007","exon_intersect_chr15:64864899|64868007"]
["chr15:66352955|66353998:-","chr15:66336981|66337181:-_chr15:66341150|66341356:-_chr15:66349060|66349123:-_chr15:66349315|66349437:-_chr15:66351525|66351600:-_chr15:66352129|66352207:-_chr15:66352815|66352955:-_chr15:66353998|66354208:-","UN_TIPIN_LS0011","TIPIN","protein coding gene","no",1.69,0,0,0.011,104,0,0,"0(0)","ESCA","no","TE_intersect_:66353860|chr15|66353860|66354028|AluSx3:Alu:SINE|95|+","NA","intron_intersect_chr15:66352955|66356639","intron_intersect_chr15:66352955|66356639"]
["chr15:68852774|68854127:+","chr15:68852669|68852774:+_chr15:68854127|68854413:+","UN_SPESP1_LS0006","SPESP1","protein coding gene","no",2.31,0,0,0.002,21,0,0,"0(0)","TGCT","no","NA","TE_intersect_:68853126|chr15|68853126|68854392|L1MC4:L1:LINE|249|+","intron_intersect_chr15:68834749|68930500","intron_intersect_chr15:68834749|68930500"]
["chr15:69455287|69455436:+","chr15:69452884|69453020:+_chr15:69453647|69453721:+_chr15:69455170|69455287:+_chr15:69455436|69455546:+","UN_RPLP1_LS0069","RPLP1","protein coding gene","no",744.16,0,0,0.003,29,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr15:69455287|69455428","exon_intersect_chr15:69455428|69456194"]
["chr15:70529234|70535437:-","chr15:70528499|70529234:-_chr15:70535437|70535740:-","UN_LINC02205_UP_LS0001","LINC02205","lncRNA gene","no",3.54,0.07,0,0.008,79,0.001,1,"0(0)","LAML","no","TE_intersect_:70535437|chr15|70535437|70535531|MIR3:MIR:SINE|267|-","TE_intersect_:70529174|chr15|70529174|70529398|L2b:L2:LINE|326|-","NA","NA"]
["chr15:72208781|72210376:+","chr15:72208623|72208781:+_chr15:72210376|72210451:+","UN_PKM_LS0306","PKM","protein coding gene","no",7.09,0,0,0.004,39,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr15:72208617|72208962","exon_intersect_chr15:72210060|72210478"]
["chr15:72834099|72846230:+","chr15:72821157|72821397:+_chr15:72833948|72834099:+_chr15:72846230|72846411:+_chr15:72858072|72858173:+_chr15:72858324|72858538:+_chr15:72891830|72891855:+_chr15:72894542|72894580:+_chr15:72896645|72897176:+","UN_AC103874.1_UP_LS0004","AC103874.1","lncRNA gene","no",3.68,0,0,0.002,17,0,0,"0(0)","TGCT","no","TE_intersect_:72834041|chr15|72834041|72834179|MLT1L:ERVL-MaLR:LTR|271|+","TE_intersect_:72846101|chr15|72846101|72846635|L1MC5:L1:LINE|200|-","NA","NA"]
["chr15:73274005|73282964:+","chr15:73260270|73260465:+_chr15:73266316|73266411:+_chr15:73270058|73270233:+_chr15:73270316|73270454:+_chr15:73272455|73272562:+_chr15:73273811|73274005:+_chr15:73282964|73283111:+_chr15:73288313|73288551:+_chr15:73289146|73289238:+_chr15:73293390|73293548:+_chr15:73298348|73298611:+_chr15:73301321|73301457:+_chr15:73302613|73304799:+","UN_NEO1_LS0029","NEO1","protein coding gene","no",3.87,0,0,0.009,89,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr15:73274005|73274692","exon_intersect_chr15:73282964|73283111"]
["chr15:73768186|73768371:+","chr15:73767319|73768186:+_chr15:73768371|73768456:+_chr15:73768753|73768910:+_chr15:73769470|73770613:+","UN_INSYN1-AS1_LS0008","INSYN1-AS1","lncRNA gene","no",2.05,0,0,0.002,17,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr15:73752747|73768214","exon_intersect_chr15:73768214|73768456"]
["chr15:74802507|74802654:-","chr15:74801021|74801039:-_chr15:74802453|74802507:-_chr15:74802654|74802877:-","UN_CSK_LS0037","CSK","protein coding gene","no",3.15,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr15:74802331|74803198","exon_intersect_chr15:74802331|74803198"]
["chr15:75131186|75138892:+","chr15:75130708|75131186:+_chr15:75138892|75141305:+","UN_C15orf39_UP_LS0004","C15orf39","protein coding gene","no",1.33,0,0,0.005,49,0,0,"0(0)","OV","no","TE_intersect_:75130974|chr15|75130974|75131655|L1MB2:L1:LINE|164|-","TE_intersect_:75138890|chr15|75138890|75139240|MER115:hAT-Tip100:DNA|277|-","NA","NA"]
["chr15:75728122|75731967:-","chr15:75727670|75728122:-_chr15:75731967|75732152:-_chr15:75738387|75738767:-","UN_DNM1P35_LS0002","DNM1P35","lncRNA gene","no",1.72,0,0,0.002,20,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr15:75731967|75732152","exon_intersect_chr15:75727670|75730434"]
["chr15:77249823|77252367:-","chr15:77247410|77249823:-_chr15:77252367|77252526:-_chr15:77283883|77284030:-_chr15:77284958|77285078:-_chr15:77286423|77286504:-_chr15:77361315|77361386:-","UN_PEAK1_LS0072","PEAK1","protein coding gene","no",1.87,0,0,0.007,65,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr15:77252367|77252531","intron_intersect_chr15:77205100|77252367"]
["chr15:78600013|78601253:-","chr15:78595305|78596732:-_chr15:78599892|78600013:-_chr15:78601253|78602264:-_chr15:78617024|78617133:-_chr15:78618617|78618661:-_chr15:78618776|78618915:-_chr15:78620713|78620789:-","UN_CHRNA3_LS0005","CHRNA3","protein coding gene","no",3.22,0,0,0.002,15,0,0,"0(0)","THYM","no","NA","TE_intersect_:78599733|chr15|78599733|78600031|AluSx1:Alu:SINE|141|+","exon_intersect_chr15:78601253|78602264","intron_intersect_chr15:78600013|78601253"]
["chr15:81591041|81614931:-","chr15:81586524|81589841:-_chr15:81590956|81591041:-_chr15:81614931|81615042:-_chr15:81642009|81642190:-","UN_AC060809.1_LS0007","AC060809.1","lncRNA gene","no",1.93,0,0,0.004,38,0,0,"0(0)","THYM","no","TE_intersect_:81614857|chr15|81614857|81615025|AluJb:Alu:SINE|161|+","NA","intron_intersect_chr15:81610176|81633887","intron_intersect_chr15:81554030|81610009"]
["chr15:82098979|82099405:+","chr15:82093976|82094234:+_chr15:82095482|82098979:+_chr15:82099405|82101508:+","UN_AC026624.1_UP_LS0007","AC026624.1","lncRNA gene","no",6,0,0,0.012,118,0,0,"0(0)","CHOL;MESO;SARC","no","NA","NA","NA","NA"]
["chr15:83318577|83318851:+","chr15:83299745|83299847:+_chr15:83300505|83300533:+_chr15:83302495|83302608:+_chr15:83318417|83318577:+_chr15:83318851|83319096:+","UN_AC103876.1_LS0009","AC103876.1","lncRNA gene","no",7.41,0,0,0.001,14,0,0,"0(0)","THYM","no","TE_intersect_:83318015|chr15|83318015|83318632|MLT1F1-int:ERVL-MaLR:LTR|179|+","TE_intersect_:83318635|chr15|83318635|83319157|MLT1F1:ERVL-MaLR:LTR|179|+","intron_intersect_chr15:83284716|83439420","intron_intersect_chr15:83284716|83439420"]
["chr15:85750339|85752764:-","chr15:85744109|85744814:-_chr15:85748908|85749125:-_chr15:85750242|85750339:-_chr15:85752764|85752985:-_chr15:85755518|85755655:-_chr15:85755822|85757688:-_chr15:85757884|85757989:-_chr15:85758251|85758348:-_chr15:85758511|85758772:-_chr15:85759064|85761011:-_chr15:85768017|85769820:-_chr15:85794766|85794858:-","UN_AC021739.5_LS0001","AC021739.5","lncRNA gene","no",2.39,0,0,0.02,191,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:85750035|chr15|85750035|85750376|AluSz:Alu:SINE|70|+","exon_intersect_chr15:85752764|85752901","exon_intersect_chr15:85750336|85750691"]
["chr15:88543874|88544480:+","chr15:88538147|88538859:+_chr15:88543467|88543874:+_chr15:88544480|88546195:+","UN_AC013489.1_LS0052","AC013489.1","protein coding gene","no",8.88,0,0,0.001,14,0,0,"0(0)","TGCT","no","TE_intersect_:88543834|chr15|88543834|88544782|HERVS71-int:ERV1:LTR|105|+","TE_intersect_:88543834|chr15|88543834|88544782|HERVS71-int:ERV1:LTR|105|+","intron_intersect_chr15:88536381|88546238","intron_intersect_chr15:88536381|88546238"]
["chr15:89400372|89410555:+","chr15:89400271|89400372:+_chr15:89410555|89410701:+_chr15:89500055|89500378:+_chr15:89500455|89500570:+_chr15:89500663|89500743:+_chr15:89506634|89507656:+","UN_AC013391.3_UP_LS0001","AC013391.3","lncRNA gene","no",2.28,0,0,0.022,209,0,0,"0(0)","GBM;LGG;LUSC","no","NA","NA","NA","NA"]
["chr15:89526484|89526600:-","chr15:89525945|89526484:-_chr15:89526600|89526619:-","UN_AC013391.2_LS0001","AC013391.2","lncRNA gene","no",1.6,0,0,0.002,15,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr15:89524034|89575482","intron_intersect_chr15:89524034|89575482"]
["chr15:90237898|90238492:+","chr15:90234263|90234292:+_chr15:90234522|90234596:+_chr15:90236063|90236181:+_chr15:90237304|90237898:+_chr15:90238492|90238548:+_chr15:90240900|90245809:+","UN_AC091167.7_LS0006","AC091167.7","protein coding gene","no",1.06,0,0,0.005,51,0,0,"0(0)","ESCA","no","TE_intersect_:90237802|chr15|90237802|90237919|AluSc8:Alu:SINE|256|+","TE_intersect_:90238482|chr15|90238482|90238565|MamRep605:LTR?:LTR?|309|+","intron_intersect_chr15:90236181|90238492","exon_intersect_chr15:90238492|90238548"]
["chr15:92656671|92656813:-","chr15:92619302|92619459:-_chr15:92630214|92630345:-_chr15:92656522|92656671:-_chr15:92656813|92657090:-_chr15:92699040|92699163:-_chr15:92724162|92724277:-","UN_FAM174B_LS0043","FAM174B","protein coding gene","no",2.91,0,0,0.004,40,0,0,"0(0)","SKCM","no","TE_intersect_:92656701|chr15|92656701|92657277|MLT1F2:ERVL-MaLR:LTR|194|-","NA","intron_intersect_chr15:92656631|92667898","intron_intersect_chr15:92656631|92667898"]
["chr15:93242388|93247416:+","chr15:93242059|93242388:+_chr15:93247416|93247496:+_chr15:93248031|93248211:+_chr15:93250807|93251903:+","UN_AC112693.1_UP_LS0018","AC112693.1","lncRNA gene","no",2.22,0,0,0.005,49,0,0,"0(0)","TGCT","no","TE_intersect_:93241981|chr15|93241981|93242580|L2a:L2:LINE|333|-","NA","NA","NA"]
["chr15:94404628|94440176:+","chr15:94298266|94298730:+_chr15:94314282|94314344:+_chr15:94315529|94315637:+_chr15:94339290|94339432:+_chr15:94340199|94340275:+_chr15:94340813|94340924:+_chr15:94345129|94345164:+_chr15:94356137|94356301:+_chr15:94358482|94358612:+_chr15:94367605|94367791:+_chr15:94370087|94370180:+_chr15:94384022|94384124:+_chr15:94385423|94385525:+_chr15:94398961|94399062:+_chr15:94399921|94399995:+_chr15:94401900|94404628:+_chr15:94440176|94440298:+_chr15:94442919|94442960:+_chr15:94458137|94458246:+_chr15:94470333|94476499:+_chr15:94476696|94476793:+_chr15:94478966|94479583:+","UN_MCTP2_LS0037","MCTP2","protein coding gene","no",2.88,0,0,0.002,17,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr15:94403264|94440176","exon_intersect_chr15:94440176|94440298"]
["chr15:96361289|96403510:+","chr15:96354390|96354512:+_chr15:96361142|96361289:+_chr15:96403510|96405110:+","UN_AC087477.2_LS0013","AC087477.2","lncRNA gene","no",1.73,0,0,0.003,27,0,0,"0(0)","CHOL;KIRP","no","NA","TE_intersect_:96403459|chr15|96403459|96403687|MamSINE1:tRNA-RTE:SINE|307|-","intron_intersect_chr15:96354512|96388214","exon_intersect_chr15:96403510|96403803"]
["chr15:98551193|98611587:+","chr15:98550599|98551193:+_chr15:98611587|98613251:+","UN_IGF1R_UP_LS0004","IGF1R","protein coding gene","yes",2.31,0,0,0.002,17,0,0,"0(0)","THYM","no","NA","TE_intersect_:98611558|chr15|98611558|98611863|AluJr:Alu:SINE|164|-","NA","NA"]
["chr15:99434593|99434751:-","chr15:99423399|99427202:-_chr15:99434460|99434593:-_chr15:99434751|99435295:-","UN_AC015660.1_UP_LS0003","AC015660.1","lncRNA gene","no",1.3,0,0,0.007,64,0,0,"0(0)","ESCA","no","NA","TE_intersect_:99434339|chr15|99434339|99434607|L2a:L2:LINE|302|+","NA","NA"]
["chr16:10429016|10429372:+","chr16:10428901|10429016:+_chr16:10429372|10429645:+_chr16:10430611|10431455:+_chr16:10433525|10436491:+","UN_ATF7IP2_LS0019","ATF7IP2","protein coding gene","no",1.57,0,0,0.005,50,0,0,"0(0)","STAD","no","TE_intersect_:10428876|chr16|10428876|10429027|AluJo:Alu:SINE|185|-","TE_intersect_:10429360|chr16|10429360|10429638|AluSz6:Alu:SINE|115|-","intron_intersect_chr16:10429016|10430595","intron_intersect_chr16:10429016|10430595"]
["chr16:11249778|11316141:+","chr16:11249619|11249778:+_chr16:11316141|11316884:+_chr16:11350642|11351760:+","UN_RMI2_LS0005","RMI2","protein coding gene","no",2.13,0,0,0.007,66,0,0,"0(0)","DLBC;OV;THYM","no","NA","NA","intron_intersect_chr16:11249778|11254405","exon_intersect_chr16:11316141|11317036"]
["chr16:11782388|11782467:-","chr16:11765575|11765685:-_chr16:11767417|11767578:-_chr16:11768315|11768501:-_chr16:11769031|11769095:-_chr16:11770783|11770987:-_chr16:11774236|11774519:-_chr16:11774980|11775013:-_chr16:11776320|11776358:-_chr16:11776452|11776532:-_chr16:11776751|11776909:-_chr16:11779166|11779363:-_chr16:11781425|11781464:-_chr16:11782287|11782388:-_chr16:11782467|11782552:-","UN_ZC3H7A_LS0028","ZC3H7A","protein coding gene","no",0.95,0,0,0.003,30,0,0,"0(0)","DLBC","no","TE_intersect_:11782466|chr16|11782466|11782586|L2c:L2:LINE|368|+","NA","exon_intersect_chr16:11782287|11782552","exon_intersect_chr16:11782287|11782552"]
["chr16:12553267|12556353:-","chr16:12550908|12551104:-_chr16:12552389|12552607:-_chr16:12553077|12553267:-_chr16:12556353|12556539:-_chr16:12556899|12557003:-_chr16:12560924|12561146:-_chr16:12619495|12619729:-","UN_SNX29_LS0092","SNX29","protein coding gene","no",3.8,0,0,0.003,27,0,0,"0(0)","KICH","no","NA","NA","exon_intersect_chr16:12556353|12556539","intron_intersect_chr16:12546684|12556353"]
["chr16:13870683|13908551:-","chr16:13791217|13793158:-_chr16:13856564|13856636:-_chr16:13870601|13870683:-_chr16:13908551|13908728:-_chr16:13915077|13915391:-","UN_U95743.1_UP_LS0014","U95743.1","lncRNA gene","no",2.64,0,0,0.006,61,0,0,"0(0)","KIRC","no","TE_intersect_:13908150|chr16|13908150|13908668|L2a:L2:LINE|310|+","TE_intersect_:13870534|chr16|13870534|13871339|L1MC1:L1:LINE|146|+","NA","NA"]
["chr16:1487972|1488619:+","chr16:1487813|1487972:+_chr16:1488619|1489678:+_chr16:1489976|1490724:+_chr16:1493041|1493605:+_chr16:1494281|1494616:+_chr16:1495346|1495623:+_chr16:1497036|1497104:+_chr16:1497361|1497508:+_chr16:1499231|1499333:+_chr16:1500096|1500164:+_chr16:1500347|1500488:+_chr16:1500563|1500699:+_chr16:1501420|1501499:+_chr16:1501663|1501773:+_chr16:1502047|1502135:+_chr16:1502313|1502404:+_chr16:1502645|1502761:+_chr16:1502931|1503002:+_chr16:1505410|1505601:+_chr16:1506238|1506329:+_chr16:1506484|1506631:+","UN_PTX4_LS0004","PTX4","protein coding gene","no",4.5,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr16:1487970|1488342","intron_intersect_chr16:1488467|1488769"]
["chr16:15306396|15311765:+","chr16:15306255|15306396:+_chr16:15311765|15312677:+","UN_AC137803.1_UP_LS0004","AC137803.1","pseudogene","no",4.14,0,0,0.005,49,0,0,"0(0)","SARC","no","TE_intersect_:15306080|chr16|15306080|15306474|MLT1A1:ERVL-MaLR:LTR|192|+","NA","NA","NA"]
["chr16:15364069|15364177:-","chr16:15363624|15364069:-_chr16:15364177|15364932:-_chr16:15365429|15365464:-_chr16:15365574|15365634:-_chr16:15366653|15366760:-_chr16:15369712|15369856:-_chr16:15370020|15370119:-_chr16:15373715|15373843:-_chr16:15380928|15381974:-","UN_NPIPA5_LS0007","NPIPA5","protein coding gene","no",2.75,0,0,0.004,39,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr16:15364069|15364876","intron_intersect_chr16:15364069|15364876"]
["chr16:16444166|16449662:-","chr16:16443723|16444166:-_chr16:16449662|16449791:-","UN_AC136619.1_UP_LS0001","AC136619.1","pseudogene","no",2.9,0,0,0.01,94,0,0,"0(0)","ESCA;HNSC;SARC","no","TE_intersect_:16449583|chr16|16449583|16449977|MLT1A1:ERVL-MaLR:LTR|200|-","TE_intersect_:16444086|chr16|16444086|16444204|L1ME4a:L1:LINE|224|+","NA","NA"]
["chr16:18262266|18267722:+","chr16:18262055|18262266:+_chr16:18267722|18268467:+","UN_AC126755.5_UP_LS0002","AC126755.5","pseudogene","no",2.77,0,0,0.006,59,0,0,"0(0)","SARC","no","TE_intersect_:18261950|chr16|18261950|18262344|MLT1A1:ERVL-MaLR:LTR|192|+","TE_intersect_:18267683|chr16|18267683|18267800|L1ME4a:L1:LINE|224|-","NA","NA"]
["chr16:18318251|18341044:+","chr16:18317925|18318029:+_chr16:18318099|18318251:+_chr16:18341044|18341065:+","UN_AC126755.7_LS0003","AC126755.7","lncRNA gene","no",2.42,0,0,0.007,70,0,0,"0(0)","GBM;OV","no","NA","NA","exon_intersect_chr16:18317942|18318435","intron_intersect_chr16:18340869|18341622"]
["chr16:1962152|1962240:+","chr16:1962058|1962152:+_chr16:1962240|1962403:+","UN_RPS2_LS0004","RPS2","protein coding gene","no",28.09,0,0,0.003,33,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr16:1962052|1963256","exon_intersect_chr16:1962052|1963256"]
["chr16:20898797|20900204:-","chr16:20854925|20860369:-_chr16:20862108|20862643:-_chr16:20896308|20897874:-_chr16:20898723|20898797:-_chr16:20900204|20900349:-","UN_ERI2_LS0047","ERI2","protein coding gene","no",1.24,0,0,0.003,28,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr16:20900204|20900384","intron_intersect_chr16:20896381|20899868"]
["chr16:21401194|21411198:+","chr16:21379945|21380215:+_chr16:21382130|21382375:+_chr16:21385557|21385932:+_chr16:21401088|21401194:+_chr16:21411198|21411245:+","UN_AC005632.3_UP_LS0008","AC005632.3","pseudogene","no",0.15,0,0,0.001,14,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chr16:21401089|21401198","intron_intersect_chr16:21411129|21411242"]
["chr16:21431880|21432056:+","chr16:21425430|21431880:+_chr16:21432056|21440398:+_chr16:21440430|21440631:+","UN_NPIPB3_LS0159","NPIPB3","protein coding gene","no",4.34,0,0,0.001,14,0,0,"0(0)","LAML","no","TE_intersect_:21431874|chr16|21431874|21432002|AluYh3:Alu:SINE|62|-","TE_intersect_:21432002|chr16|21432002|21432292|AluSx:Alu:SINE|128|-","intron_intersect_chr16:21431553|21440648","intron_intersect_chr16:21431553|21440648"]
["chr16:21842423|21864838:+","chr16:21841012|21842423:+_chr16:21864838|21866129:+","UN_NPIPB4_LS0097","NPIPB4","protein coding gene","no",0.76,0,0,0.002,23,0,0,"0(0)","LAML","no","TE_intersect_:21842372|chr16|21842372|21842672|AluSx4:Alu:SINE|90|+","TE_intersect_:21864786|chr16|21864786|21865100|AluSp:Alu:SINE|89|+","intron_intersect_chr16:21841011|21843386","intron_intersect_chr16:21864103|21866127"]
["chr16:22325266|22325419:+","chr16:22302974|22303004:+_chr16:22305156|22305206:+_chr16:22308148|22308225:+_chr16:22308925|22309040:+_chr16:22309428|22309510:+_chr16:22313620|22313727:+_chr16:22314079|22314128:+_chr16:22315089|22315208:+_chr16:22316601|22316686:+_chr16:22316995|22317039:+_chr16:22317115|22317206:+_chr16:22318826|22318946:+_chr16:22322850|22322931:+_chr16:22324354|22324413:+_chr16:22324503|22324660:+_chr16:22325205|22325266:+_chr16:22325419|22325648:+_chr16:22325761|22326278:+_chr16:22326671|22332185:+_chr16:22333644|22333935:+","UN_POLR3E_LS0015","POLR3E","protein coding gene","no",12.47,0,0,0.002,20,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr16:22325205|22325359","intron_intersect_chr16:22325359|22325761"]
["chr16:22535566|22535832:-","chr16:22534920|22534993:-_chr16:22535498|22535566:-_chr16:22535832|22535899:-","UN_NPIPB5_LS0287","NPIPB5","protein coding gene","no",17.69,0,0,0.02,191,0,0,"0(0)","ESCA;GBM;OV;STAD","no","NA","NA","exon_intersect_chr16:22533600|22536521","exon_intersect_chr16:22533600|22536521"]
["chr16:23418827|23420391:-","chr16:23388776|23389086:-_chr16:23392380|23392523:-_chr16:23393233|23393347:-_chr16:23398046|23398129:-_chr16:23403694|23403834:-_chr16:23406076|23406262:-_chr16:23410295|23410360:-_chr16:23413448|23413564:-_chr16:23416967|23417121:-_chr16:23418700|23418827:-_chr16:23420391|23421109:-","UN_COG7_LS0022","COG7","protein coding gene","no",2.36,0,0,0.005,46,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr16:23418827|23424749","intron_intersect_chr16:23418827|23424749"]
["chr16:24478285|24478886:-","chr16:24464090|24466897:-_chr16:24471744|24471840:-_chr16:24474495|24478285:-_chr16:24478886|24479204:-","UN_AC008938.1_LS0004","AC008938.1","lncRNA gene","no",2.91,0,0,0.005,46,0,0,"0(0)","TGCT","no","TE_intersect_:24478295|chr16|24478295|24478907|LTR9D:ERV1:LTR|189|+","NA","exon_intersect_chr16:24472798|24479113","exon_intersect_chr16:24472798|24479113"]
["chr16:25209957|25213156:+","chr16:25191067|25191187:+_chr16:25209765|25209957:+_chr16:25213156|25213282:+_chr16:25217198|25217445:+_chr16:25221457|25221583:+_chr16:25224362|25224576:+_chr16:25227068|25227202:+_chr16:25228444|25228932:+","UN_AQP8_UP_LS0016","AQP8","protein coding gene","no",3.32,0,0,0.003,32,0,0,"0(0)","ACC;LIHC","no","TE_intersect_:25209955|chr16|25209955|25210102|MIR:MIR:SINE|287|+","TE_intersect_:25212969|chr16|25212969|25213266|MLT1J2:ERVL-MaLR:LTR|239|+","NA","NA"]
["chr16:2762680|2762825:-","chr16:2761812|2762026:-_chr16:2762261|2762293:-_chr16:2762387|2762680:-_chr16:2762825|2763040:-","UN_SRRM2_LS0101","SRRM2","protein coding gene","no",2.55,0,0,0.004,39,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr16:2761561|2768261","exon_intersect_chr16:2761561|2768261"]
["chr16:28416799|28416929:+","chr16:28415737|28416799:+_chr16:28416929|28417485:+","UN_AC138894.4_UP_LS0004","AC138894.4","pseudogene","no",2.8,0,0,0.003,24,0,0,"0(0)","ESCA","no","TE_intersect_:28415884|chr16|28415884|28416878|SVA_F:SVA:Retroposon|62|+","TE_intersect_:28416846|chr16|28416846|28417838|SVA_F:SVA:Retroposon|51|+","NA","NA"]
["chr16:28869383|28872190:+","chr16:28863878|28863945:+_chr16:28866012|28867033:+_chr16:28867331|28867432:+_chr16:28869006|28869097:+_chr16:28869208|28869383:+_chr16:28872190|28872401:+_chr16:28872534|28872758:+_chr16:28873170|28873269:+_chr16:28873447|28873755:+","UN_SH2B1_LS0059","SH2B1","protein coding gene","no",3.44,0,0,0.012,113,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr16:28869383|28871780","exon_intersect_chr16:28871780|28872401"]
["chr16:29383505|29384022:+","chr16:29381712|29381786:+_chr16:29383437|29383505:+_chr16:29384022|29384078:+_chr16:29384136|29384208:+","UN_NPIPB11_LS0072","NPIPB11","protein coding gene","no",10.67,0.12,0,0.012,114,0.001,1,"0(0)","UCEC","no","NA","NA","exon_intersect_chr16:29381354|29384289","exon_intersect_chr16:29381354|29384289"]
["chr16:29454816|29455398:+","chr16:29454562|29454816:+_chr16:29455398|29455449:+_chr16:29455544|29455885:+_chr16:29457632|29457759:+_chr16:29457928|29458015:+_chr16:29458095|29458188:+","UN_SLX1B_LS0003","SLX1B","protein coding gene","no",1.87,0.01,0,0.004,40,0.001,1,"0(0)","READ","no","NA","NA","exon_intersect_chr16:29454191|29454964","exon_intersect_chr16:29454501|29455885"]
["chr16:29520221|29520887:+","chr16:29505996|29512369:+_chr16:29515355|29520221:+_chr16:29520887|29527571:+","UN_AC009086.1_UP_LS0043","AC009086.1","pseudogene","no",3.1,0,0,0.001,14,0,0,"0(0)","LAML","no","TE_intersect_:29520060|chr16|29520060|29520509|LTR7B:ERV1:LTR|60|+","TE_intersect_:29520690|chr16|29520690|29521144|LTR7B:ERV1:LTR|46|+","NA","NA"]
["chr16:29709455|29710191:+","chr16:29709178|29709455:+_chr16:29710191|29710496:+","UN_AC009133.3_UP_LS0002","AC009133.3","lncRNA gene","no",6.39,0,0,0.005,48,0,0,"0(0)","TGCT","no","TE_intersect_:29709406|chr16|29709406|29709676|HUERS-P3b-int:ERV1:LTR|142|+","TE_intersect_:29710181|chr16|29710181|29710490|HUERS-P3b-int:ERV1:LTR|142|+","NA","NA"]
["chr16:29963506|29968071:-","chr16:29963430|29963506:-_chr16:29968071|29968255:-","UN_TMEM219_LS0028","TMEM219","protein coding gene","no",1.43,0,0,0.005,52,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr16:29968025|29968594","exon_intersect_chr16:29963400|29963589"]
["chr16:30084864|30085019:-","chr16:30083396|30083537:-_chr16:30084707|30084864:-_chr16:30085019|30085051:-","UN_PPP4C_LS0027","PPP4C","protein coding gene","no",0.67,0,0,0.004,41,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr16:30084933|30085377","intron_intersect_chr16:30084855|30084933"]
["chr16:3021968|3022032:-","chr16:3021787|3021968:-_chr16:3022032|3022356:-","UN_TNFRSF12A_LS0038","TNFRSF12A","protein coding gene","yes",2.17,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr16:3021771|3022383","exon_intersect_chr16:3021771|3022383"]
["chr16:30369877|30407981:-","chr16:30359750|30359841:-_chr16:30364900|30365006:-_chr16:30365105|30365212:-_chr16:30365495|30365594:-_chr16:30369228|30369877:-_chr16:30407981|30408029:-","UN_CD2BP2_UP_LS0003","CD2BP2","protein coding gene","no",2.36,0,0,0.002,16,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr16:30407664|30408031","exon_intersect_chr16:30369228|30370264"]
["chr16:30887953|30892649:+","chr16:30887803|30887953:+_chr16:30892649|30892743:+","UN_BCL7C_LS0029","BCL7C","protein coding gene","no",4.24,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr16:30887795|30887990","exon_intersect_chr16:30892586|30892747"]
["chr16:3175674|3175844:+","chr16:3174502|3174622:+_chr16:3174823|3175674:+_chr16:3175844|3177573:+","UN_AJ003147.2_UP_LS0022","AJ003147.2","lncRNA gene","no",3.15,0,0,0.007,71,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr16:32877842|32879178:-","chr16:32877469|32877842:-_chr16:32879178|32879348:-_chr16:32879431|32879531:-_chr16:32879618|32879720:-_chr16:32879797|32879860:-_chr16:32880478|32880601:-_chr16:32880693|32880807:-_chr16:32880884|32882087:-_chr16:32882531|32882780:-_chr16:32883067|32883703:-_chr16:32885236|32885585:-","UN_SLC6A10P_LS0001","SLC6A10P","pseudogene","no",4.87,0,0,0.003,31,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr16:32879178|32879348","intron_intersect_chr16:32877842|32878706"]
["chr16:33599074|33599484:+","chr16:33588648|33588780:+_chr16:33588862|33588986:+_chr16:33598887|33599074:+_chr16:33599484|33599640:+_chr16:33602190|33602667:+","UN_AC142384.1_LS0005","AC142384.1","pseudogene","no",10.99,0,0,0.011,106,0,0,"0(0)","CHOL;MESO;TGCT;UCS","no","NA","NA","intron_intersect_chr16:33599065|33599484","exon_intersect_chr16:33599484|33599645"]
["chr16:33977964|33982005:+","chr16:33975422|33976304:+_chr16:33977833|33977964:+_chr16:33982005|33982105:+_chr16:33982187|33982357:+_chr16:33982539|33984067:+","UN_AC133561.1_LS0008","AC133561.1","pseudogene","no",4.11,0,0,0.007,66,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr16:33977964|33978756","exon_intersect_chr16:33982005|33982096"]
["chr16:35802693|35814049:+","chr16:35802413|35802693:+_chr16:35814049|35814059:+","UN_VN1R70P_UP_LS0005","VN1R70P","pseudogene","no",2.76,0,0,0.006,61,0,0,"0(0)","UCEC","no","NA","NA","NA","NA"]
["chr16:46617749|46621257:-","chr16:46580576|46582054:-_chr16:46583516|46583657:-_chr16:46584003|46584089:-_chr16:46595552|46595670:-_chr16:46599831|46599962:-_chr16:46603539|46603659:-_chr16:46603975|46604143:-_chr16:46604228|46604461:-_chr16:46608297|46608389:-_chr16:46615946|46616154:-_chr16:46617634|46617749:-_chr16:46621257|46621364:-","UN_SHCBP1_LS0008","SHCBP1","protein coding gene","no",1.17,0,0,0.004,40,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr16:46621257|46621626","intron_intersect_chr16:46617749|46618205"]
["chr16:48031277|48036702:-","chr16:48029351|48031277:-_chr16:48036702|48036790:-_chr16:48047018|48047626:-","UN_LINC02192_UP_LS0011","LINC02192","lncRNA gene","no",1.81,0,0,0.003,28,0,0,"0(0)","GBM","no","TE_intersect_:48036598|chr16|48036598|48036787|MIR3:MIR:SINE|260|-","NA","NA","NA"]
["chr16:49525494|49608903:-","chr16:49490787|49491304:-_chr16:49523624|49523739:-_chr16:49525363|49525494:-_chr16:49608903|49608926:-","UN_ZNF423_LS0015","ZNF423","protein coding gene","no",2.83,0,0,0.001,12,0,0,"0(0)","PCPG","no","TE_intersect_:49608467|chr16|49608467|49613410|L1MD1:L1:LINE|176|+","NA","intron_intersect_chr16:49525494|49626170","intron_intersect_chr16:49525494|49626170"]
["chr16:50526063|50531479:+","chr16:50505914|50506251:+_chr16:50522477|50522528:+_chr16:50524833|50524967:+_chr16:50525885|50526063:+_chr16:50531479|50531581:+_chr16:50532008|50532780:+_chr16:50540114|50540206:+_chr16:50542158|50542433:+_chr16:50542706|50542827:+_chr16:50546090|50547111:+","UN_AC007493.1_LS0022","AC007493.1","lncRNA gene","no",2.77,0,0,0.005,49,0,0,"0(0)","READ","no","NA","NA","NA","NA"]
["chr16:51152175|51312944:+","chr16:51152032|51152175:+_chr16:51312944|51313597:+","UN_AC087564.1_LS0011","AC087564.1","lncRNA gene","no",2.31,0,0,0.004,41,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr16:5198832|5199035:-","chr16:5198365|5198616:-_chr16:5198771|5198832:-_chr16:5199035|5201653:-","UN_AC074051.5_LS0007","AC074051.5","lncRNA gene","no",4.83,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","TE_intersect_:5198789|chr16|5198789|5198892|MER81:hAT-Blackjack:DNA|272|-","NA","NA"]
["chr16:55736392|55742437:+","chr16:55736339|55736392:+_chr16:55742437|55742517:+_chr16:55742780|55742927:+_chr16:55746758|55746889:+_chr16:55749561|55749591:+_chr16:55790612|55790676:+_chr16:55793408|55793480:+_chr16:55793777|55794158:+","UN_CES1P2_LS0002","CES1P2","pseudogene","no",2.76,0,0,0.003,29,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr16:55736392|55740403","exon_intersect_chr16:55742437|55742517"]
["chr16:56737778|56738173:-","chr16:56737147|56737778:-_chr16:56738173|56739317:-","UN_NUP93_LS0004","NUP93","protein coding gene","no",2.6,0,0,0.007,63,0,0,"0(0)","CESC","no","NA","NA","intron_intersect_chr16:56730211|56740714","intron_intersect_chr16:56730211|56740714"]
["chr16:56739312|56739491:-","chr16:56739205|56739312:-_chr16:56739491|56739538:-_chr16:56739588|56739636:-_chr16:56739686|56739816:-_chr16:56740043|56740717:-","UN_NUP93_LS0012","NUP93","protein coding gene","no",1.47,0,0,0.006,55,0,0,"0(0)","ESCA","no","TE_intersect_:56738957|chr16|56738957|56739945|SVA_F:SVA:Retroposon|75|-","TE_intersect_:56738957|chr16|56738957|56739945|SVA_F:SVA:Retroposon|75|-","intron_intersect_chr16:56730211|56740714","intron_intersect_chr16:56730211|56740714"]
["chr16:57595474|57597493:+","chr16:57595228|57595474:+_chr16:57597493|57598124:+","UN_HMGB3P32_UP_LS0005","HMGB3P32","pseudogene","no",1.95,0,0,0.005,48,0,0,"0(0)","DLBC","no","TE_intersect_:57595016|chr16|57595016|57595492|L1ME3B:L1:LINE|257|-","TE_intersect_:57596458|chr16|57596458|57598332|L1ME3B:L1:LINE|233|-","NA","NA"]
["chr16:58393825|58397077:-","chr16:58393697|58393825:-_chr16:58397077|58397814:-","UN_GINS3_LS0020","GINS3","protein coding gene","no",2.17,0,0,0.002,22,0,0,"0(0)","ESCA","no","TE_intersect_:58395337|chr16|58395337|58397852|SVA_D:SVA:Retroposon|93|-","TE_intersect_:58393560|chr16|58393560|58393847|AluSc:Alu:SINE|77|+","intron_intersect_chr16:58395218|58402942","intron_intersect_chr16:58393673|58395102"]
["chr16:62841747|62842344:-","chr16:62841410|62841747:-_chr16:62842344|62842985:-","UN_AC010546.1_UP_LS0001","AC010546.1","pseudogene","no",3.38,0,0,0.002,19,0,0,"0(0)","OV","no","NA","TE_intersect_:62841675|chr16|62841675|62841932|MLT1H2:ERVL-MaLR:LTR|253|-","NA","NA"]
["chr16:635719|636228:+","chr16:635612|635719:+_chr16:636228|636359:+","UN_METTL26_LS0044","METTL26","protein coding gene","no",1.49,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr16:634889|636366","exon_intersect_chr16:634889|636366"]
["chr16:65230205|65233015:-","chr16:65229841|65230205:-_chr16:65233015|65233302:-_chr16:65234886|65235276:-_chr16:65278962|65278986:-","UN_AC009055.2_LS0006","AC009055.2","lncRNA gene","no",6.96,0,0,0.008,77,0,0,"0(0)","TGCT","no","TE_intersect_:65232144|chr16|65232144|65234891|HERVH-int:ERV1:LTR|95|-","TE_intersect_:65229804|chr16|65229804|65230256|LTR7:ERV1:LTR|60|-","exon_intersect_chr16:65233015|65233885","intron_intersect_chr16:65228021|65233015"]
["chr16:658344|658569:+","chr16:655058|655147:+_chr16:655307|655468:+_chr16:655573|655703:+_chr16:655773|655889:+_chr16:656302|656537:+_chr16:656732|656871:+_chr16:657091|657221:+_chr16:657762|657892:+_chr16:658183|658344:+_chr16:658569|658653:+_chr16:658896|659126:+_chr16:659245|659376:+_chr16:660612|660714:+","UN_WDR90_LS0027","WDR90","protein coding gene","no",2.08,0,0,0.008,80,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr16:658344|658525","exon_intersect_chr16:658525|658653"]
["chr16:666598|666655:+","chr16:665184|665801:+_chr16:665950|666124:+_chr16:666220|666350:+_chr16:666455|666598:+_chr16:666655|666745:+","UN_WDR90_LS0062","WDR90","protein coding gene","no",2.89,0,0,0.011,108,0,0,"0(0)","UCEC","no","NA","NA","exon_intersect_chr16:666455|666792","exon_intersect_chr16:666455|666792"]
["chr16:69304786|69306828:-","chr16:69304678|69304786:-_chr16:69306828|69306956:-","UN_SNTB2_LS0026","SNTB2","protein coding gene","no",1.1,0,0,0.002,17,0,0,"0(0)","ESCA","no","TE_intersect_:69306653|chr16|69306653|69306959|AluSx:Alu:SINE|108|+","TE_intersect_:69304651|chr16|69304651|69304967|AluJr:Alu:SINE|136|-","exon_intersect_chr16:69300832|69309052","exon_intersect_chr16:69300832|69309052"]
["chr16:70161121|70161313:+","chr16:70114372|70114440:+_chr16:70120461|70120719:+_chr16:70127260|70127393:+_chr16:70128784|70128865:+_chr16:70128959|70129122:+_chr16:70130423|70130544:+_chr16:70131302|70131419:+_chr16:70132151|70132300:+_chr16:70136194|70136386:+_chr16:70138899|70139023:+_chr16:70142234|70142389:+_chr16:70142553|70142686:+_chr16:70143510|70143658:+_chr16:70144421|70144533:+_chr16:70146134|70146228:+_chr16:70148464|70148553:+_chr16:70153391|70153573:+_chr16:70156475|70161121:+_chr16:70161313|70162615:+","UN_PDPR_LS0063","PDPR","protein coding gene","no",8.45,0,0,0.005,51,0,0,"0(0)","LAML;STAD","no","NA","NA","exon_intersect_chr16:70156475|70162537","exon_intersect_chr16:70156475|70162537"]
["chr16:70663901|70663990:+","chr16:70661662|70663901:+_chr16:70663990|70664449:+","UN_MTSS1L_LS0066","MTSS1L","protein coding gene","no",7.93,0.17,0,0.012,112,0.001,1,"0(0)","LGG","no","NA","NA","exon_intersect_chr16:70661204|70664449","exon_intersect_chr16:70661204|70664449"]
["chr16:72205190|72206361:+","chr16:72203653|72203770:+_chr16:72205052|72205190:+_chr16:72206361|72209445:+","UN_AC009075.2_UP_LS0002","AC009075.2","pseudogene","no",2.83,0,0,0.002,20,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr16:74349859|74352040:-","chr16:74334892|74334986:-_chr16:74336594|74336706:-_chr16:74337475|74337623:-_chr16:74338445|74338660:-_chr16:74338739|74338894:-_chr16:74342130|74342254:-_chr16:74344779|74344971:-_chr16:74348867|74349015:-_chr16:74349742|74349859:-_chr16:74352040|74352203:-_chr16:74352297|74352378:-_chr16:74353777|74353910:-_chr16:74360633|74367684:-_chr16:74368065|74368148:-","UN_AC009053.1_LS0011","AC009053.1","pseudogene","no",0.75,0,0,0.006,59,0.001,1,"0(0)","ESCA","no","NA","NA","exon_intersect_chr16:74352040|74352378","intron_intersect_chr16:74349859|74350617"]
["chr16:75474877|75476827:-","chr16:75472044|75473467:-_chr16:75474613|75474877:-_chr16:75476827|75479844:-_chr16:75481817|75481891:-_chr16:75494940|75495384:-","UN_CHST6_LS0015","CHST6","protein coding gene","no",4.82,0,0,0.003,26,0,0,"0(0)","GBM","no","TE_intersect_:75476748|chr16|75476748|75477043|AluSx:Alu:SINE|119|-","TE_intersect_:75474805|chr16|75474805|75475092|AluSz:Alu:SINE|139|-","exon_intersect_chr16:75472052|75479844","exon_intersect_chr16:75472052|75479844"]
["chr16:76635623|76736317:+","chr16:76634987|76635149:+_chr16:76635497|76635623:+_chr16:76736317|76736479:+","UN_AC104151.1_LS0004","AC104151.1","protein coding gene","no",3.89,0,0,0.015,146,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr16:76635623|76655557","intron_intersect_chr16:76658478|76736342"]
["chr16:77567315|77572537:-","chr16:77562944|77567315:-_chr16:77572537|77572703:-_chr16:77674973|77675076:-","UN_ADAMTS18_UP_LS0010","ADAMTS18","protein coding gene","yes",4.41,0,0,0.002,23,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr16:79126562|79211608:+","chr16:79126303|79126562:+_chr16:79211608|79212300:+","UN_WWOX_LS0118","WWOX","protein coding gene","yes",7.45,0,0,0.003,27,0,0,"0(0)","THYM","no","TE_intersect_:79126311|chr16|79126311|79126680|THE1D:ERVL-MaLR:LTR|114|+","NA","intron_intersect_chr16:79110882|79196359","exon_intersect_chr16:79211608|79212667"]
["chr16:80160321|80265621:-","chr16:80154250|80156007:-_chr16:80157614|80157682:-_chr16:80159337|80159455:-_chr16:80160232|80160321:-_chr16:80265621|80265797:-","UN_AC105411.1_LS0016","AC105411.1","lncRNA gene","no",4.46,0,0,0.002,21,0,0,"0(0)","CHOL","no","NA","TE_intersect_:80160168|chr16|80160168|80160371|L1ME3A:L1:LINE|256|+","intron_intersect_chr16:80218866|80491217","intron_intersect_chr16:80160306|80167404"]
["chr16:8115090|8115131:-","chr16:8113368|8115090:-_chr16:8115131|8117029:-","UN_AC093515.1_UP_LS0036","AC093515.1","lncRNA gene","no",4.01,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:8114383|chr16|8114383|8115932|SVA_D:SVA:Retroposon|72|+","TE_intersect_:8114383|chr16|8114383|8115932|SVA_D:SVA:Retroposon|72|+","NA","NA"]
["chr16:8181741|8182241:+","chr16:8113495|8115235:+_chr16:8180003|8180104:+_chr16:8181599|8181741:+_chr16:8182241|8185900:+","UN_LINC02152_UP_LS0017","LINC02152","lncRNA gene","no",1.84,0,0,0.006,54,0,0,"0(0)","TGCT","no","NA","TE_intersect_:8182210|chr16|8182210|8182516|AluSx3:Alu:SINE|144|-","NA","NA"]
["chr16:8432390|8462395:-","chr16:8431436|8432390:-_chr16:8462395|8462964:-_chr16:8473337|8473451:-_chr16:8474417|8474734:-","UN_AC018767.2_UP_LS0001","AC018767.2","lncRNA gene","no",19.09,0,0,0.003,28,0,0,"0(0)","PCPG","no","TE_intersect_:8462324|chr16|8462324|8462682|MLT1A0:ERVL-MaLR:LTR|216|-","TE_intersect_:8431817|chr16|8431817|8432745|MER49:ERV1:LTR|134|-","NA","NA"]
["chr16:85962620|85962865:+","chr16:85962446|85962620:+_chr16:85962865|85962923:+_chr16:85963251|85963420:+","UN_AC092723.1_UP_LS0001","AC092723.1","lncRNA gene","no",7.14,0,0,0.003,31,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr16:86577085|86578508:+","chr16:86577066|86577085:+_chr16:86578508|86582160:+","UN_FOXL1_LS0013","FOXL1","protein coding gene","no",1.12,0,0,0.011,103,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr16:86576454|86578506","exon_intersect_chr16:86578506|86582160"]
["chr16:87732870|87733135:+","chr16:87732629|87732870:+_chr16:87733135|87734840:+","UN_KLHDC4_LS0063","KLHDC4","protein coding gene","no",2.3,0,0,0.004,38,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr16:87731006|87739771","intron_intersect_chr16:87731006|87739771"]
["chr16:88087378|88100694:-","chr16:88081367|88084715:-_chr16:88087011|88087378:-_chr16:88100694|88100959:-","UN_AC127455.1_UP_LS0007","AC127455.1","pseudogene","no",4.03,0,0,0.007,65,0,0,"0(0)","PCPG;THYM","no","NA","NA","exon_intersect_chr16:88100694|88100985","exon_intersect_chr16:88087011|88087383"]
["chr16:88485364|88485939:+","chr16:88485342|88485364:+_chr16:88485939|88486043:+_chr16:88489031|88489153:+_chr16:88514387|88514520:+_chr16:88526814|88526916:+_chr16:88528032|88528238:+_chr16:88532002|88532235:+_chr16:88532614|88532709:+_chr16:88532789|88532935:+_chr16:88533148|88535124:+","UN_ZFPM1_LS0008","ZFPM1","protein coding gene","no",1.64,0,0,0.004,40,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr16:88469031|88485939","exon_intersect_chr16:88485939|88486043"]
["chr16:88882761|88882853:-","chr16:88875525|88877275:-_chr16:88879270|88879460:-_chr16:88880720|88880788:-_chr16:88881291|88881489:-_chr16:88882676|88882761:-_chr16:88882853|88885269:-_chr16:88885961|88886142:-_chr16:88891882|88891971:-_chr16:88892244|88892485:-_chr16:88898078|88898152:-_chr16:88901504|88901656:-_chr16:88976657|88977080:-","UN_CBFA2T3_LS0027","CBFA2T3","protein coding gene","yes",1.17,0,0,0.004,34,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr16:88882761|88883272","intron_intersect_chr16:88882761|88883272"]
["chr16:89175243|89179256:+","chr16:89174507|89175243:+_chr16:89179256|89179574:+_chr16:89180200|89180355:+_chr16:89183548|89183692:+_chr16:89185173|89185333:+_chr16:89187429|89187557:+_chr16:89188100|89188285:+_chr16:89190243|89190496:+_chr16:89191330|89191472:+_chr16:89191655|89191894:+_chr16:89192205|89192444:+_chr16:89193470|89193606:+_chr16:89193755|89193913:+_chr16:89194862|89195492:+","UN_CDH15_LS0003","CDH15","protein coding gene","no",1.53,0,0,0.003,32,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr16:89171873|89179416","intron_intersect_chr16:89171873|89179416"]
["chr16:89578996|89579135:+","chr16:89575874|89576071:+_chr16:89577539|89577721:+_chr16:89578857|89578996:+_chr16:89579135|89583528:+_chr16:89583697|89583771:+_chr16:89584028|89584102:+_chr16:89584774|89584857:+_chr16:89585464|89585553:+_chr16:89585687|89585785:+_chr16:89586670|89586756:+_chr16:89587051|89587102:+_chr16:89587556|89588808:+_chr16:89589897|89589951:+_chr16:89591007|89591058:+_chr16:89591127|89591260:+_chr16:89595367|89595603:+_chr16:89596484|89596816:+","UN_CPNE7_LS0005","CPNE7","protein coding gene","yes",2.48,0,0,0.002,15,0,0,"0(0)","CHOL","no","TE_intersect_:89578984|chr16|89578984|89579008|L1ME2:L1:LINE|244|-","TE_intersect_:89579008|chr16|89579008|89579304|AluSx3:Alu:SINE|88|+","intron_intersect_chr16:89578996|89583444","intron_intersect_chr16:89578996|89583444"]
["chr16:89638440|89640594:+","chr16:89613620|89613719:+_chr16:89630305|89630514:+_chr16:89635908|89636040:+_chr16:89636264|89636396:+_chr16:89636533|89636683:+_chr16:89636866|89636935:+_chr16:89637204|89637380:+_chr16:89637468|89637552:+_chr16:89637632|89637707:+_chr16:89637836|89637971:+_chr16:89638052|89638440:+_chr16:89640594|89641540:+","UN_SPATA33_UP_LS0002","SPATA33","protein coding gene","no",7.73,0,0,0.005,52,0,0,"0(0)","COAD","no","NA","NA","exon_intersect_chr16:89638052|89638456","NA"]
["chr16:89918047|89919255:+","chr16:89917879|89918047:+_chr16:89919255|89920973:+","UN_MC1R_LS0035","MC1R","protein coding gene","no",2.64,0,0,0.015,144,0.004,3,"0(0)","THYM","no","NA","NA","exon_intersect_chr16:89917876|89920977","exon_intersect_chr16:89917876|89920977"]
["chr16:89987371|89987399:+","chr16:89985920|89987371:+_chr16:89987399|89988951:+_chr16:89990866|89991003:+_chr16:89992721|89992828:+_chr16:89993768|89993893:+_chr16:89994759|89996644:+","UN_AFG3L1P_LS0058","AFG3L1P","pseudogene","no",1.58,0,0,0.006,58,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr16:89985570|89988496","intron_intersect_chr16:89985570|89988496"]
["chr16:980277|981145:-","chr16:976521|977093:-_chr16:979025|979110:-_chr16:979601|980277:-_chr16:981145|981293:-","UN_LMF1_LS0115","LMF1","protein coding gene","no",7.85,0,0,0.009,87,0.001,1,"0(0)","LGG","no","NA","NA","exon_intersect_chr16:979025|981596","exon_intersect_chr16:979025|981596"]
["chr17:11090897|11091055:-","chr17:11080619|11084616:-_chr17:11090754|11090897:-_chr17:11091055|11091116:-_chr17:11106415|11106551:-","UN_RPL15P21_UP_LS0010","RPL15P21","pseudogene","no",4.66,0,0,0.002,15,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr17:1230935|1231480:-","chr17:1229969|1230935:-_chr17:1231480|1231919:-","UN_ABR_UP_LS0006","ABR","protein coding gene","no",2.43,0,0,0.004,35,0,0,"0(0)","TGCT","no","TE_intersect_:1231440|chr17|1231440|1231707|L2c:L2:LINE|368|+","NA","NA","NA"]
["chr17:14377421|14381792:+","chr17:14374081|14374228:+_chr17:14377284|14377421:+_chr17:14381792|14381936:+_chr17:14382018|14382101:+_chr17:14397062|14397172:+_chr17:14420657|14423809:+","UN_AC022816.1_LS0004","AC022816.1","lncRNA gene","no",2.98,0,0,0.002,22,0,0,"0(0)","LIHC","no","TE_intersect_:14377252|chr17|14377252|14377556|AluY:Alu:SINE|59|-","NA","intron_intersect_chr17:14377421|14382018","intron_intersect_chr17:14377421|14382018"]
["chr17:15866610|15866818:+","chr17:15866343|15866610:+_chr17:15866818|15868396:+","UN_SPECC1P1_LS0010","SPECC1P1","pseudogene","no",2.55,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:15866537|chr17|15866537|15866678|L1ME3:L1:LINE|248|-","TE_intersect_:15866795|chr17|15866795|15868381|SVA_D:SVA:Retroposon|74|+","NA","NA"]
["chr17:16825655|16825688:+","chr17:16823933|16824201:+_chr17:16824523|16825655:+_chr17:16825688|16828305:+","UN_COTL1P1_UP_LS0026","COTL1P1","pseudogene","no",1.94,0,0,0.001,13,0,0,"0(0)","THYM","no","TE_intersect_:16825475|chr17|16825475|16825775|AluY:Alu:SINE|83|+","TE_intersect_:16825475|chr17|16825475|16825775|AluY:Alu:SINE|83|+","NA","NA"]
["chr17:17907531|17912341:-","chr17:17893678|17893810:-_chr17:17898596|17898674:-_chr17:17907447|17907531:-_chr17:17912341|17913609:-_chr17:17972262|17972397:-","UN_TOM1L2_LS0052","TOM1L2","protein coding gene","yes",3.97,0,0,0.009,84,0,0,"0(0)","CESC;HNSC","no","TE_intersect_:17911651|chr17|17911651|17913237|SVA_D:SVA:Retroposon|25|-","NA","intron_intersect_chr17:17907531|17972262","intron_intersect_chr17:17907531|17972262"]
["chr17:17907531|17955415:-","chr17:17847349|17847783:-_chr17:17848823|17848859:-_chr17:17850893|17850952:-_chr17:17861476|17861551:-_chr17:17862731|17862848:-_chr17:17866296|17866419:-_chr17:17866876|17866924:-_chr17:17869340|17869473:-_chr17:17879627|17879743:-_chr17:17882705|17882863:-_chr17:17884634|17884768:-_chr17:17893661|17893810:-_chr17:17898596|17898674:-_chr17:17907447|17907531:-_chr17:17955415|17956142:-","UN_TOM1L2_LS0055","TOM1L2","protein coding gene","yes",3.4,0,0,0.002,21,0,0,"0(0)","TGCT","no","TE_intersect_:17955325|chr17|17955325|17955638|AluSc5:Alu:SINE|128|-","NA","intron_intersect_chr17:17907531|17972262","intron_intersect_chr17:17907531|17972262"]
["chr17:18621540|18625135:+","chr17:18621341|18621540:+_chr17:18625135|18625275:+","UN_CCDC144B_LS0016","CCDC144B","pseudogene","no",1.87,0,0,0.004,41,0,0,"0(0)","THYM","no","TE_intersect_:18621360|chr17|18621360|18621796|Tigger2a:TcMar-Tigger:DNA|177|+","NA","intron_intersect_chr17:18620265|18622499","exon_intersect_chr17:18625104|18625617"]
["chr17:19043966|19063925:-","chr17:19043939|19043966:-_chr17:19063925|19064136:-","UN_FAM83G_UP_LS0011","FAM83G","protein coding gene","no",20.89,0,0,0.004,35,0,0,"0(0)","ESCA","no","TE_intersect_:19063919|chr17|19063919|19064136|U3:snRNA:snRNA|5|-","TE_intersect_:19043942|chr17|19043942|19044188|AluSc:Alu:SINE|65|-","exon_intersect_chr17:19063346|19064136","intron_intersect_chr17:19042485|19046849"]
["chr17:19652632|19661127:+","chr17:19648761|19649124:+_chr17:19651547|19651778:+_chr17:19652547|19652632:+_chr17:19661127|19661268:+_chr17:19663333|19663499:+_chr17:19664948|19665047:+_chr17:19671721|19671956:+_chr17:19675558|19677593:+","UN_ALDH3A2_LS0010","ALDH3A2","protein coding gene","no",5.33,0,0,0.004,34,0,0,"0(0)","LIHC","no","NA","NA","exon_intersect_chr17:19652547|19652697","exon_intersect_chr17:19661127|19661442"]
["chr17:20847498|20865419:-","chr17:20847330|20847498:-_chr17:20865419|20865509:-_chr17:20866548|20866703:-_chr17:20893392|20893462:-_chr17:20893691|20893831:-","UN_CCDC144NL_LS0017","CCDC144NL","protein coding gene","no",2.78,0,0,0.005,48,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr17:20863395|20865509","intron_intersect_chr17:20844257|20855946"]
["chr17:2085901|2150582:-","chr17:2085783|2085901:-_chr17:2150582|2150736:-","UN_SMG6_LS0034","SMG6","protein coding gene","no",4.69,0,0,0.004,41,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr17:2127904|2172658","intron_intersect_chr17:2085901|2087075"]
["chr17:21090380|21090952:+","chr17:21075556|21075957:+_chr17:21084761|21084884:+_chr17:21090268|21090380:+_chr17:21090952|21091179:+_chr17:21092208|21092314:+","UN_DHRS7B_UP_LS0004","DHRS7B","protein coding gene","no",3.26,0,0,0.006,62,0,0,"0(0)","GBM;LGG","no","TE_intersect_:21089976|chr17|21089976|21090484|ERVL-E-int:ERVL:LTR|302|+","NA","exon_intersect_chr17:21090268|21090615","NA"]
["chr17:22183229|22204087:+","chr17:22090732|22090908:+_chr17:22181539|22181605:+_chr17:22183107|22183229:+_chr17:22204087|22205136:+","UBBP4_LS003","UBBP4","pseudogene","no",26.1,0.03,0,0.012,118,0.007,5,"0(0)","UCS","yes","TE_intersect_:22181683|chr17|22181683|22183264|THE1B-int:ERVL-MaLR:LTR|100|+","NA","NA","exon_intersect_chr17:22204087|22205156"]
["chr17:27049010|27071922:-","chr17:27047887|27047987:-_chr17:27048942|27049010:-_chr17:27071922|27072827:-_chr17:27076607|27076643:-_chr17:27078592|27078732:-_chr17:27089094|27089255:-","UN_GTF2IP6_UP_LS0003","GTF2IP6","pseudogene","no",10.07,0,0,0.011,102,0,0,"0(0)","THYM","no","NA","TE_intersect_:27048921|chr17|27048921|27049038|AluJo:Alu:SINE|188|+","NA","NA"]
["chr17:27354226|27354502:+","chr17:27354004|27354226:+_chr17:27354502|27354620:+_chr17:27355141|27355271:+","UN_TBC1D3P5_UP_LS0002","TBC1D3P5","pseudogene","no",1.91,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr17:28360847|28361675:+","chr17:28357708|28357881:+_chr17:28358916|28358989:+_chr17:28359315|28359404:+_chr17:28360529|28360571:+_chr17:28360735|28360847:+_chr17:28361675|28363678:+","UN_TMEM199_LS0005","TMEM199","protein coding gene","no",3.96,0,0,0.011,102,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr17:28360151|28361108","exon_intersect_chr17:28361601|28362425"]
["chr17:28721954|28722410:-","chr17:28721487|28721954:-_chr17:28722410|28722877:-","UN_RPL23A_LS0026","RPL23A","protein coding gene","no",5.15,0,0,0.002,20,0,0,"0(0)","LAML","no","TE_intersect_:28722282|chr17|28722282|28722476|AluSc:Alu:SINE|113|-","NA","exon_intersect_chr17:28722410|28722877","intron_intersect_chr17:28721917|28722410"]
["chr17:29197799|29212484:-","chr17:29111786|29111863:-_chr17:29114011|29114097:-_chr17:29114907|29115099:-_chr17:29115351|29115441:-_chr17:29115664|29115840:-_chr17:29116444|29116455:-_chr17:29118045|29118189:-_chr17:29118377|29118440:-_chr17:29119335|29119435:-_chr17:29120616|29120758:-_chr17:29120998|29121211:-_chr17:29121547|29121723:-_chr17:29121851|29121957:-_chr17:29122166|29122253:-_chr17:29165942|29167021:-_chr17:29197721|29197799:-_chr17:29212484|29212724:-","UN_AC005412.1_UP_LS0003","AC005412.1","pseudogene","no",3.42,0,0,0.004,34,0,0,"0(0)","LGG","no","TE_intersect_:29212327|chr17|29212327|29212562|MIR:MIR:SINE|269|-","NA","NA","NA"]
["chr17:29929968|29930837:+","chr17:29929172|29929329:+_chr17:29929817|29929968:+_chr17:29930837|29930970:+","UN_EFCAB5_LS0003","EFCAB5","protein coding gene","no",4.34,0,0,0.003,26,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr17:29929938|29930276","intron_intersect_chr17:29930276|29941605"]
["chr17:30900562|30906168:-","chr17:30898986|30899606:-_chr17:30900413|30900562:-_chr17:30906168|30906217:-","UN_TEFM_LS0005","TEFM","protein coding gene","no",2.25,0,0,0.007,68,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr17:30906168|30906820","intron_intersect_chr17:30900562|30904039"]
["chr17:32369782|32370000:+","chr17:32350184|32350326:+_chr17:32351786|32351912:+_chr17:32358503|32358641:+_chr17:32360598|32360765:+_chr17:32360892|32360967:+_chr17:32361468|32361515:+_chr17:32362914|32362984:+_chr17:32365330|32365487:+_chr17:32367772|32368014:+_chr17:32369295|32369454:+_chr17:32369599|32369782:+_chr17:32370000|32370343:+","UN_ZNF207_LS0030","ZNF207","protein coding gene","no",13.2,0,0,0.005,47,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr17:32369599|32381886","exon_intersect_chr17:32369599|32381886"]
["chr17:33932706|34155978:-","chr17:33931132|33931377:-_chr17:33932600|33932706:-_chr17:34155978|34157294:-","UN_ASIC2_LS0045","ASIC2","protein coding gene","no",6.64,0,0,0.002,19,0,0,"0(0)","PCPG","no","NA","TE_intersect_:33932422|chr17|33932422|33932742|AluSp:Alu:SINE|109|+","exon_intersect_chr17:34155978|34157294","intron_intersect_chr17:33932685|33936004"]
["chr17:35768379|35778888:-","chr17:35765877|35766894:-_chr17:35767752|35767919:-_chr17:35768101|35768379:-_chr17:35778888|35779075:-_chr17:35779244|35779311:-","UN_MMP28_LS0023","MMP28","protein coding gene","no",1.12,0.03,0,0.002,20,0.001,1,"0(0)","PAAD","no","NA","NA","exon_intersect_chr17:35778505|35779075","intron_intersect_chr17:35768379|35770067"]
["chr17:3650261|3650357:-","chr17:3650060|3650261:-_chr17:3650357|3650480:-_chr17:3651424|3651602:-_chr17:3652467|3654997:-","UN_CTNS_LS0032","CTNS","protein coding gene","no",1.14,0,0,0.004,36,0,0,"0(0)","OV","no","TE_intersect_:3650321|chr17|3650321|3650506|AluJo:Alu:SINE|211|+","NA","exon_intersect_chr17:3650174|3650519","exon_intersect_chr17:3650174|3650519"]
["chr17:37024335|37031614:+","chr17:37024159|37024335:+_chr17:37031614|37031685:+_chr17:37056606|37056858:+","UN_AATF_LS0031","AATF","protein coding gene","no",22,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:37024143|chr17|37024143|37024395|L2c:L2:LINE|322|-","NA","intron_intersect_chr17:37021154|37031365","exon_intersect_chr17:37031365|37031685"]
["chr17:38003415|38015456:-","chr17:38003107|38003415:-_chr17:38015456|38015853:-","UN_TBC1D3L_UP_LS0003","TBC1D3L","protein coding gene","no",5.82,0,0,0.002,20,0,0,"0(0)","OV","no","TE_intersect_:38015319|chr17|38015319|38015492|L1MD3:L1:LINE|281|-","NA","intron_intersect_chr17:38014902|38057693","intron_intersect_chr17:37989048|38003976"]
["chr17:38560476|38561463:-","chr17:38530019|38533431:-_chr17:38543823|38543969:-_chr17:38547759|38547881:-_chr17:38548557|38548727:-_chr17:38549056|38549210:-_chr17:38551155|38551389:-_chr17:38551886|38552132:-_chr17:38552447|38552594:-_chr17:38552725|38552855:-_chr17:38558227|38558402:-_chr17:38559585|38559772:-_chr17:38560054|38560097:-_chr17:38560333|38560476:-_chr17:38561463|38562328:-_chr17:38562827|38562920:-_chr17:38563323|38563424:-","UN_SRCIN1_LS0036","SRCIN1","protein coding gene","no",0.79,0,0,0.006,61,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr17:38561463|38562328","intron_intersect_chr17:38560425|38561463"]
["chr17:38925862|38926417:+","chr17:38925573|38925862:+_chr17:38926417|38929454:+","UN_LINC00672_LS0003","LINC00672","protein coding gene","no",0.16,0,0,0.02,190,0.001,1,"0(0)","LGG;PCPG","no","NA","NA","exon_intersect_chr17:38925168|38925891","exon_intersect_chr17:38926417|38928057"]
["chr17:39285573|39290732:-","chr17:39260587|39261567:-_chr17:39264175|39264387:-_chr17:39265397|39265453:-_chr17:39268827|39268871:-_chr17:39270796|39270856:-_chr17:39274970|39275100:-_chr17:39281389|39281463:-_chr17:39282729|39282855:-_chr17:39285478|39285573:-_chr17:39290732|39290840:-","UN_FBXL20_LS0034","FBXL20","protein coding gene","no",2.71,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:39290574|chr17|39290574|39290862|AluJo:Alu:SINE|181|-","NA","intron_intersect_chr17:39285573|39297127","intron_intersect_chr17:39285573|39297127"]
["chr17:40164022|40166830:-","chr17:40163496|40163677:-_chr17:40163755|40164022:-_chr17:40166830|40166862:-","UN_CASC3_LS0015","CASC3","protein coding gene","no",2.92,0,0,0.004,38,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr17:40166797|40167080","exon_intersect_chr17:40163481|40164166"]
["chr17:40476651|40492832:+","chr17:40476470|40476651:+_chr17:40492832|40492945:+","UN_TNS4_LS0013","TNS4","protein coding gene","yes",2.23,0,0,0.004,43,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:40476583|chr17|40476583|40476881|AluSx:Alu:SINE|117|+","TE_intersect_:40492754|chr17|40492754|40492978|AluSx1:Alu:SINE|103|+","exon_intersect_chr17:40475828|40477729","intron_intersect_chr17:40488969|40495987"]
["chr17:41483713|41582328:+","chr17:41483696|41483713:+_chr17:41582328|41582485:+_chr17:41583268|41583323:+_chr17:41583584|41583849:+_chr17:41611159|41611227:+_chr17:41611375|41611515:+_chr17:41622433|41622502:+_chr17:41622943|41623042:+","UN_AC130686.1_UP_LS0015","AC130686.1","lncRNA gene","no",68.63,0,0,0.004,37,0,0,"0(0)","ESCA","no","NA","NA","NA","exon_intersect_chr17:41582279|41583140"]
["chr17:41582485|41583268:+","chr17:41483696|41483713:+_chr17:41582328|41582485:+_chr17:41583268|41583323:+_chr17:41583584|41583849:+_chr17:41611159|41611227:+_chr17:41611375|41611515:+_chr17:41622433|41622502:+_chr17:41622943|41623042:+","UN_KRT14_LS0009","KRT14","protein coding gene","no",447.86,0,0,0.007,66,0,0,"0(0)","HNSC","no","NA","NA","exon_intersect_chr17:41582279|41583140","exon_intersect_chr17:41583235|41583455"]
["chr17:41622502|41622943:+","chr17:41516800|41516828:+_chr17:41584278|41584319:+_chr17:41622418|41622502:+_chr17:41622943|41623084:+","UN_KRT17_LS0068","KRT17","protein coding gene","no",321.06,0.82,0,0.027,259,0.001,1,"0(0)","CESC;HNSC;LUSC","no","NA","NA","exon_intersect_chr17:41621593|41622511","exon_intersect_chr17:41622873|41623268"]
["chr17:4192860|4194978:-","chr17:4166274|4170861:-_chr17:4172556|4172680:-_chr17:4173354|4173444:-_chr17:4173909|4174056:-_chr17:4177126|4177302:-_chr17:4178857|4179057:-_chr17:4179721|4179877:-_chr17:4181254|4181372:-_chr17:4182181|4182349:-_chr17:4183398|4183551:-_chr17:4183812|4183910:-_chr17:4184818|4185046:-_chr17:4189382|4189479:-_chr17:4191187|4192860:-_chr17:4194978|4195177:-_chr17:4195403|4195471:-_chr17:4197373|4197577:-_chr17:4206321|4208082:-_chr17:4209824|4209947:-_chr17:4216983|4217118:-_chr17:4235772|4235890:-_chr17:4242256|4242448:-_chr17:4263932|4263956:-","UN_ANKFY1_LS0042","ANKFY1","protein coding gene","no",6.22,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","TE_intersect_:4192767|chr17|4192767|4192863|HY3:scRNA:scRNA|62|+","exon_intersect_chr17:4194461|4195177","intron_intersect_chr17:4191335|4194461"]
["chr17:42973284|42973413:+","chr17:42972235|42972911:+_chr17:42973028|42973284:+_chr17:42973413|42973978:+","UN_PTGES3L_LS0016","PTGES3L","protein coding gene","no",3.28,0,0,0.005,45,0,0,"0(0)","ESCA","no","TE_intersect_:42972298|chr17|42972298|42974012|SVA_F:SVA:Retroposon|25|+","TE_intersect_:42972298|chr17|42972298|42974012|SVA_F:SVA:Retroposon|25|+","intron_intersect_chr17:42972154|42975689","intron_intersect_chr17:42972154|42975689"]
["chr17:43528555|43528583:+","chr17:43528350|43528555:+_chr17:43528583|43528745:+","UN_DHX8_LS0058","DHX8","protein coding gene","no",5.74,0,0,0.006,53,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr17:43527844|43528743","exon_intersect_chr17:43527844|43528743"]
["chr17:44294931|44299410:-","chr17:44294370|44294931:-_chr17:44299410|44304207:-_chr17:44307292|44308415:-","UN_RN7SL507P_UP_LS0001","RN7SL507P","small non-coding RNA gene","no",0.91,0,0,0.009,89,0,0,"0(0)","KICH;THCA","no","TE_intersect_:44299259|chr17|44299259|44299505|ERVL-E-int:ERVL:LTR|312|-","TE_intersect_:44294404|chr17|44294404|44295021|ERVL-E-int:ERVL:LTR|316|-","NA","NA"]
["chr17:44421244|44421494:+","chr17:44414139|44421244:+_chr17:44421494|44422543:+","UN_GPATCH8_LS0043","GPATCH8","protein coding gene","no",9.32,0,0,0.002,21,0,0,"0(0)","ESCA","no","TE_intersect_:44421183|chr17|44421183|44421365|AluSp:Alu:SINE|77|+","TE_intersect_:44421367|chr17|44421367|44421663|AluSx:Alu:SINE|115|-","intron_intersect_chr17:44409358|44424349","intron_intersect_chr17:44409358|44424349"]
["chr17:44906634|44906690:+","chr17:44905573|44905899:+_chr17:44905935|44906085:+_chr17:44906302|44906634:+_chr17:44906690|44907027:+_chr17:44907079|44907238:+_chr17:44907276|44907783:+","UN_GFAP_LS0083","GFAP","protein coding gene","no",10.82,0,0,0.003,24,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr17:44905626|44907388","exon_intersect_chr17:44905626|44907388"]
["chr17:44914700|44915039:+","chr17:44914373|44914700:+_chr17:44915039|44915431:+","UN_GFAP_LS0183","GFAP","protein coding gene","no",1.82,0,0,0.002,15,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr17:44914376|44915026","exon_intersect_chr17:44915026|44915552"]
["chr17:44967582|44969106:-","chr17:44959693|44960367:-_chr17:44967452|44967582:-_chr17:44969106|44969222:-","UN_KIF18B_UP_LS0004","KIF18B","protein coding gene","no",2.23,0,0,0.003,31,0,0,"0(0)","LGG","no","NA","NA","NA","exon_intersect_chr17:44967452|44968071"]
["chr17:46162525|46170855:-","chr17:46149271|46152966:-_chr17:46162477|46162525:-_chr17:46170855|46172232:-_chr17:46192823|46192906:-","UN_KANSL1_LS0057","KANSL1","protein coding gene","no",4.04,0.04,0,0.007,66,0.003,2,"0(0)","LAML","no","NA","TE_intersect_:46162487|chr17|46162487|46163270|L2b:L2:LINE|313|+","exon_intersect_chr17:46170855|46172239","intron_intersect_chr17:46152966|46170855"]
["chr17:46275418|46283735:-","chr17:46268697|46275418:-_chr17:46283735|46287269:-","UN_ARL17B_LS0002","ARL17B","protein coding gene","no",2.62,0,0,0.003,30,0,0,"0(0)","TGCT","no","TE_intersect_:46283613|chr17|46283613|46284581|LTR5_Hs:ERVK:LTR|59|-","NA","intron_intersect_chr17:46275418|46292733","intron_intersect_chr17:46275418|46292733"]
["chr17:47218932|47219904:+","chr17:47218858|47218932:+_chr17:47219904|47220053:+_chr17:47221682|47221855:+_chr17:47222380|47222457:+_chr17:47223014|47223057:+_chr17:47223509|47223679:+","UN_MYL4_LS0001","MYL4","protein coding gene","no",3.07,0,0,0.001,12,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr17:47213919|47219904","exon_intersect_chr17:47219904|47220053"]
["chr17:48498395|48500865:-","chr17:48494159|48498395:-_chr17:48500865|48501253:-","UN_SKAP1_UP_LS0003","SKAP1","protein coding gene","no",2.2,0,0,0.002,17,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr17:48996491|48997065:-","chr17:48995270|48995582:-_chr17:48996418|48996491:-_chr17:48997065|48997111:-","UN_AC091133.2_LS0004","AC091133.2","lncRNA gene","no",1.34,0,0,0.004,43,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr17:48996491|48997412","intron_intersect_chr17:48996491|48997412"]
["chr17:49545229|49545640:-","chr17:49521558|49521790:-_chr17:49543943|49545229:-_chr17:49545640|49545831:-","AC006487.2_LS001","AC006487.2","lncRNA gene","no",3.29,0,0,0.005,49,0,0,"0(0)","GBM;UCS","yes","NA","NA","intron_intersect_chr17:49545229|49561002","intron_intersect_chr17:49545229|49561002"]
["chr17:50184433|50185283:+","chr17:50132158|50132170:+_chr17:50184265|50184433:+_chr17:50185283|50185651:+_chr17:50185781|50185876:+_chr17:50186671|50186900:+_chr17:50187498|50187671:+","UN_COL1A1_LS0069","COL1A1","protein coding gene","no",172.28,0,0,0.005,48,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr17:50183289|50185648","exon_intersect_chr17:50183289|50185648"]
["chr17:50187119|50191821:+","chr17:50185267|50185640:+_chr17:50187026|50187119:+_chr17:50191821|50192027:+","UN_COL1A1_LS0555","COL1A1","protein coding gene","no",1.83,0,0,0.005,45,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr17:50186640|50187122","exon_intersect_chr17:50191788|50191886"]
["chr17:50194806|50195581:+","chr17:50194720|50194806:+_chr17:50195581|50195724:+","UN_COL1A1_LS0781","COL1A1","protein coding gene","no",3.42,0,0,0.011,102,0,0,"0(0)","MESO;PAAD;SARC","no","NA","NA","exon_intersect_chr17:50194721|50194828","exon_intersect_chr17:50195567|50195665"]
["chr17:513780|514057:+","chr17:513578|513642:+_chr17:513689|513780:+_chr17:514057|514144:+","UN_VPS53_LS0041","VPS53","protein coding gene","yes",3.11,0,0,0.005,46,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr17:508668|519298","exon_intersect_chr17:508668|519298"]
["chr17:52570946|52574896:+","chr17:52297833|52297932:+_chr17:52532532|52532594:+_chr17:52534733|52534824:+_chr17:52535625|52535728:+_chr17:52570875|52570946:+_chr17:52574896|52575195:+","UN_LINC02089_UP_LS0017","LINC02089","lncRNA gene","no",3.67,0,0,0.01,94,0,0,"0(0)","PCPG","no","TE_intersect_:52570905|chr17|52570905|52571343|L2c:L2:LINE|360|+","TE_intersect_:52573718|chr17|52573718|52579464|HERV9-int:ERV1:LTR|81|+","NA","NA"]
["chr17:55381058|55402196:+","chr17:55379951|55380150:+_chr17:55380610|55381058:+_chr17:55402196|55403722:+","UN_RNU6-1249P_UP_LS0003","RNU6-1249P","small non-coding RNA gene","no",3.71,0,0,0.001,14,0,0,"0(0)","UCS","no","TE_intersect_:55380858|chr17|55380858|55381119|L2c:L2:LINE|348|-","NA","NA","intron_intersect_chr17:55401538|55403767"]
["chr17:56908877|56912105:-","chr17:56908483|56908563:-_chr17:56908747|56908877:-_chr17:56912105|56912165:-_chr17:56913392|56914038:-","UN_TRIM25_LS0041","TRIM25","protein coding gene","no",0.85,0,0,0.007,70,0.001,1,"0(0)","ESCA;LAML","no","NA","TE_intersect_:56908826|chr17|56908826|56908966|MIRb:MIR:SINE|324|+","exon_intersect_chr17:56912105|56912165","intron_intersect_chr17:56908783|56912105"]
["chr17:58252506|58277841:+","chr17:58252486|58252506:+_chr17:58277841|58277974:+_chr17:58278087|58278840:+","UN_TSPOAP1-AS1_UP_LS0003","TSPOAP1-AS1","lncRNA gene","no",4.24,0,0,0.003,27,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr17:58252506|58254553","exon_intersect_chr17:58277769|58278145"]
["chr17:58280729|58280925:-","chr17:58275571|58275702:-_chr17:58277827|58278145:-_chr17:58279008|58279214:-_chr17:58279297|58279426:-_chr17:58279523|58279646:-_chr17:58279839|58280014:-_chr17:58280366|58280459:-_chr17:58280605|58280729:-_chr17:58280925|58280935:-","UN_MPO_LS0036","MPO","protein coding gene","no",45.24,0,0,0.007,65,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr17:58280605|58280935","exon_intersect_chr17:58280605|58280935"]
["chr17:59501480|59506717:+","chr17:59499427|59501480:+_chr17:59506717|59506862:+_chr17:59518347|59518989:+","UN_LINC01476_LS0011","LINC01476","lncRNA gene","no",2.38,0,0,0.015,147,0,0,"0(0)","ESCA;LUSC;TGCT","no","NA","NA","intron_intersect_chr17:59452103|59502979","intron_intersect_chr17:59503094|59526480"]
["chr17:61686165|61715951:-","chr17:61681271|61684140:-_chr17:61685836|61686165:-_chr17:61715951|61716063:-_chr17:61743013|61743134:-_chr17:61744432|61744591:-_chr17:61776401|61776562:-_chr17:61780261|61780401:-_chr17:61780840|61781005:-_chr17:61784270|61784424:-_chr17:61793597|61793678:-","UN_BRIP1_LS0005","BRIP1","protein coding gene","no",1.31,0,0,0.006,55,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr17:61715951|61716063","intron_intersect_chr17:61686165|61693430"]
["chr17:62726151|62736086:+","chr17:62726039|62726151:+_chr17:62736086|62737922:+","UN_MARCH10_LS0027","2023-03-10","protein coding gene","no",1.18,0,0,0.005,49,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr17:62726151|62735131","exon_intersect_chr17:62735931|62737332"]
["chr17:63478647|63479007:+","chr17:63477071|63477343:+_chr17:63477931|63478098:+_chr17:63478349|63478647:+_chr17:63479007|63479100:+_chr17:63479769|63479912:+_chr17:63480337|63480528:+_chr17:63481091|63481188:+_chr17:63481566|63481738:+_chr17:63482466|63482689:+_chr17:63483029|63483173:+_chr17:63483460|63483558:+","UN_ACE_LS0005","ACE","protein coding gene","no",0.56,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:63478383|chr17|63478383|63478683|AluJb:Alu:SINE|167|+","NA","intron_intersect_chr17:63478517|63478811","exon_intersect_chr17:63479007|63479100"]
["chr17:64323845|64341634:-","chr17:64322520|64323845:-_chr17:64341634|64341690:-_chr17:64348260|64348322:-_chr17:64350380|64350433:-_chr17:64352390|64352463:-_chr17:64353491|64353518:-_chr17:64354933|64355040:-_chr17:64356111|64356398:-_chr17:64360140|64360415:-_chr17:64363149|64363524:-","UN_PECAM1_LS0025","PECAM1","protein coding gene","no",5.33,0,0,0.008,72,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr17:64341634|64341690","intron_intersect_chr17:64323845|64329700"]
["chr17:65180308|65189286:+","chr17:65137524|65137597:+_chr17:65153422|65153518:+_chr17:65158295|65158345:+_chr17:65160233|65160339:+_chr17:65160536|65160587:+_chr17:65160851|65160909:+_chr17:65163013|65163089:+_chr17:65168200|65168281:+_chr17:65177732|65177803:+_chr17:65179996|65180308:+_chr17:65189286|65189315:+_chr17:65190175|65190236:+_chr17:65193543|65193656:+_chr17:65197126|65197241:+_chr17:65201993|65202080:+_chr17:65204163|65204301:+_chr17:65207922|65208007:+_chr17:65210488|65210605:+_chr17:65225002|65225486:+_chr17:65227275|65227690:+","UN_RGS9_LS0023","RGS9","protein coding gene","no",3.81,0,0,0.005,49,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr17:65180037|65185319","exon_intersect_chr17:65188704|65189315"]
["chr17:67289904|67293589:+","chr17:67289702|67289904:+_chr17:67293589|67295797:+","UN_PITPNC1_UP_LS0003","PITPNC1","protein coding gene","no",2.35,0,0,0.003,28,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr17:68181194|68186737:+","chr17:68180709|68181194:+_chr17:68186737|68188072:+","UN_AC005332.7_UP_LS0024","AC005332.7","lncRNA gene","no",3.18,0,0,0.003,24,0,0,"0(0)","DLBC;THYM","no","TE_intersect_:68181122|chr17|68181122|68181332|AluSx:Alu:SINE|196|-","TE_intersect_:68186656|chr17|68186656|68186779|MLT1A0:ERVL-MaLR:LTR|219|-","NA","NA"]
["chr17:69359020|69505780:+","chr17:69343275|69343493:+_chr17:69358880|69359020:+_chr17:69505780|69505846:+_chr17:69516855|69516903:+_chr17:69517500|69517613:+_chr17:69519313|69519432:+_chr17:69520270|69520386:+_chr17:69521049|69521100:+_chr17:69523514|69523641:+_chr17:69524901|69524978:+_chr17:69526570|69526709:+_chr17:69536115|69536160:+_chr17:69541676|69542011:+","UN_LINC01483_UP_LS0001","LINC01483","lncRNA gene","no",11.31,0,0,0.003,30,0,0,"0(0)","KICH","no","TE_intersect_:69358707|chr17|69358707|69359088|MLT1A1:ERVL-MaLR:LTR|193|+","NA","NA","exon_intersect_chr17:69505448|69505846"]
["chr17:71004542|71185596:-","chr17:70778608|70779229:-_chr17:71004428|71004542:-_chr17:71185596|71185655:-_chr17:71494562|71494620:-_chr17:71649534|71649674:-","UN_AC007423.1_UP_LS0023","AC007423.1","lncRNA gene","no",10.04,0,0,0.015,141,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr17:71185596|71185655","NA"]
["chr17:72076733|72077520:-","chr17:72071043|72071231:-_chr17:72074549|72076733:-_chr17:72077520|72077614:-","UN_SOX9-AS1_LS0013","SOX9-AS1","lncRNA gene","no",2.59,0,0,0.001,12,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr17:72077309|72079938","intron_intersect_chr17:72076733|72077213"]
["chr17:7262299|7262422:+","chr17:7261822|7261975:+_chr17:7262029|7262299:+_chr17:7262422|7262453:+","UN_CLDN7_LS0018","CLDN7","protein coding gene","no",2.39,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr17:7261821|7263213","exon_intersect_chr17:7261821|7263213"]
["chr17:73149067|73150739:-","chr17:72645950|72647662:-_chr17:72648803|72648961:-_chr17:72649170|72649268:-_chr17:72736650|72736719:-_chr17:72849634|72849804:-_chr17:72947731|72947875:-_chr17:73031556|73031714:-_chr17:73084808|73084846:-_chr17:73088657|73088775:-_chr17:73148958|73149067:-_chr17:73150739|73150882:-","UN_SLC39A11_UP_LS0003","SLC39A11","protein coding gene","no",7.36,0,0,0.002,20,0,0,"0(0)","DLBC","no","TE_intersect_:73150654|chr17|73150654|73151016|THE1B:ERVL-MaLR:LTR|99|-","TE_intersect_:73148800|chr17|73148800|73149094|AluJb:Alu:SINE|180|+","NA","NA"]
["chr17:73866331|73986857:-","chr17:73865807|73866331:-_chr17:73986857|73986951:-","UN_AC125421.2_UP_LS0007","AC125421.2","lncRNA gene","no",6.1,0,0,0.003,24,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr17:74360245|74362102:-","chr17:74357007|74357731:-_chr17:74359969|74360245:-_chr17:74362102|74362303:-_chr17:74362757|74362904:-_chr17:74363015|74363201:-","UN_AC103809.1_UP_LS0002","AC103809.1","lncRNA gene","no",5.55,0,0,0.015,142,0,0,"0(0)","LGG","no","NA","NA","NA","intron_intersect_chr17:74360245|74361735"]
["chr17:74862947|74863056:-","chr17:74862609|74862947:-_chr17:74863056|74863246:-_chr17:74863896|74864067:-_chr17:74864148|74864347:-_chr17:74864480|74864564:-_chr17:74864824|74864931:-_chr17:74865719|74865820:-_chr17:74866131|74866244:-_chr17:74866446|74866568:-_chr17:74866784|74866876:-_chr17:74872036|74872133:-_chr17:74872866|74872942:-","UN_FDXR_LS0008","FDXR","protein coding gene","no",31.72,0.81,0,0.012,118,0.003,2,"0(0)","ACC","no","NA","NA","intron_intersect_chr17:74862947|74863076","intron_intersect_chr17:74862947|74863076"]
["chr17:75592602|75592679:+","chr17:75592466|75592602:+_chr17:75592679|75592840:+_chr17:75594475|75594588:+_chr17:75594701|75594759:+_chr17:75594840|75596555:+_chr17:75596768|75596899:+_chr17:75601438|75601563:+_chr17:75602517|75602594:+_chr17:75602830|75602945:+_chr17:75603032|75603061:+","UN_MYO15B_LS0007","MYO15B","protein coding gene","no",5.53,0.05,0,0.004,40,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr17:75592541|75592679","exon_intersect_chr17:75592679|75593031"]
["chr17:75846508|75846688:+","chr17:75846263|75846508:+_chr17:75846688|75846850:+","UN_WBP2_LS0084","WBP2","protein coding gene","no",6.9,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr17:75845699|75846787","exon_intersect_chr17:75845699|75846787"]
["chr17:76255768|76259403:-","chr17:76242615|76244494:-_chr17:76253912|76254092:-_chr17:76255631|76255768:-_chr17:76259403|76259455:-","UN_RNF157_UP_LS0005","RNF157","protein coding gene","no",1.73,0,0,0.004,43,0,0,"0(0)","GBM;LIHC","no","NA","NA","NA","NA"]
["chr17:76734693|76734938:+","chr17:76734675|76734693:+_chr17:76734938|76735159:+","UN_SRSF2_LS0013","SRSF2","protein coding gene","yes",5.43,0,0,0.004,40,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr17:76734115|76736555","exon_intersect_chr17:76734115|76736555"]
["chr17:76995784|76997111:-","chr17:76989094|76989445:-_chr17:76995427|76995784:-_chr17:76997111|76997467:-","UN_AC016168.3_UP_LS0006","AC016168.3","lncRNA gene","no",2.97,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","TE_intersect_:76995669|chr17|76995669|76996131|MER34B:ERV1:LTR|206|+","NA","NA"]
["chr17:77318832|77402059:+","chr17:77318553|77318832:+_chr17:77402059|77402089:+","UN_SEPT9_LS0018","SEPT9","protein coding gene","yes",3.32,0,0,0.002,21,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr17:77307197|77319515","exon_intersect_chr17:77402059|77402703"]
["chr17:77789377|77791833:+","chr17:77787329|77787545:+_chr17:77789294|77789377:+_chr17:77791833|77792257:+","UN_RNU1-80P_UP_LS0020","RNU1-80P","small non-coding RNA gene","no",3.75,0,0,0.004,39,0,0,"0(0)","TGCT","no","NA","TE_intersect_:77791612|chr17|77791612|77791864|MER63C:hAT-Blackjack:DNA|234|+","NA","NA"]
["chr17:78225191|78225234:-","chr17:78224955|78225191:-_chr17:78225234|78225246:-","UN_BIRC5_LS0013","BIRC5","protein coding gene","yes",1.28,0,0,0.004,34,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr17:78223465|78225636","exon_intersect_chr17:78223465|78225636"]
["chr17:78369877|78374363:+","chr17:78369745|78369877:+_chr17:78374363|78374613:+","UN_PGS1_UP_LS0006","PGS1","protein coding gene","no",2.61,0,0,0.009,87,0,0,"0(0)","OV","no","NA","TE_intersect_:78374053|chr17|78374053|78374717|LTR8:ERV1:LTR|175|+","intron_intersect_chr17:78368893|78370852","NA"]
["chr17:78971374|78971448:+","chr17:78971253|78971374:+_chr17:78971448|78971666:+_chr17:78971888|78972059:+_chr17:78972087|78972226:+_chr17:78972248|78972705:+","UN_LGALS3BP_LS0008","LGALS3BP","protein coding gene","no",41.91,0,0,0.009,82,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr17:78971238|78973343","exon_intersect_chr17:78971238|78973343"]
["chr17:78973196|78974744:+","chr17:78971253|78971379:+_chr17:78971888|78972059:+_chr17:78972087|78972353:+_chr17:78973062|78973196:+_chr17:78974744|78974821:+","UN_LGALS3BP_LS0465","LGALS3BP","protein coding gene","no",4.12,0.01,0,0.004,39,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr17:78971238|78973343","exon_intersect_chr17:78974631|78974997"]
["chr17:79186482|79187318:+","chr17:79183471|79183692:+_chr17:79185526|79186482:+_chr17:79187318|79187596:+","UN_RBFOX3_LS0023","RBFOX3","protein coding gene","no",4.97,0,0,0.002,22,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr17:79183472|79208449","intron_intersect_chr17:79183472|79208449"]
["chr17:79945087|79945273:-","chr17:79937908|79941107:-_chr17:79942060|79942206:-_chr17:79944908|79945087:-_chr17:79945273|79945443:-_chr17:79947645|79947831:-_chr17:79948872|79949006:-_chr17:79949717|79949865:-_chr17:79950411|79950578:-_chr17:79950756|79950828:-","UN_TBC1D16_LS0052","TBC1D16","protein coding gene","no",3.33,0.2,0,0.023,219,0.016,11,"0(0)","UVM","no","NA","NA","intron_intersect_chr17:79945087|79947645","intron_intersect_chr17:79945087|79947645"]
["chr17:80400383|80407753:+","chr17:80397672|80398047:+_chr17:80399468|80400383:+_chr17:80407753|80408493:+","UN_AC124319.2_LS0012","AC124319.2","lncRNA gene","no",3.88,0,0,0.001,12,0,0,"0(0)","DLBC","no","TE_intersect_:80400240|chr17|80400240|80403146|HERVH-int:ERV1:LTR|231|+","TE_intersect_:80403802|chr17|80403802|80407762|HERVH-int:ERV1:LTR|152|+","intron_intersect_chr17:80398786|80414929","intron_intersect_chr17:80398786|80414929"]
["chr17:81116312|81116757:+","chr17:81035162|81035308:+_chr17:81053668|81053743:+_chr17:81057881|81057967:+_chr17:81084832|81084893:+_chr17:81085654|81085725:+_chr17:81086443|81086580:+_chr17:81099928|81100080:+_chr17:81103502|81103723:+_chr17:81103907|81104108:+_chr17:81104514|81104715:+_chr17:81106078|81106146:+_chr17:81106745|81106907:+_chr17:81108475|81108509:+_chr17:81115770|81115817:+_chr17:81116230|81116312:+_chr17:81116757|81117421:+","UN_BAIAP2_LS0053","BAIAP2","protein coding gene","no",2.58,0.01,0,0.009,87,0.001,1,"0(0)","GBM;THYM","no","NA","NA","exon_intersect_chr17:81116230|81117432","exon_intersect_chr17:81116230|81117432"]
["chr17:81457029|81457410:+","chr17:81451199|81451870:+_chr17:81451971|81452107:+_chr17:81452723|81452851:+_chr17:81455267|81457029:+_chr17:81457410|81457592:+_chr17:81458165|81458466:+_chr17:81458621|81458725:+_chr17:81458813|81458969:+_chr17:81459054|81459168:+_chr17:81459253|81459328:+_chr17:81459496|81459604:+_chr17:81460277|81460396:+_chr17:81460530|81460706:+_chr17:81460890|81462046:+_chr17:81462740|81462976:+_chr17:81463611|81463755:+","UN_BAHCC1_LS0073","BAHCC1","protein coding gene","no",1.82,0,0,0.006,53,0,0,"0(0)","CHOL;LAML","no","NA","NA","intron_intersect_chr17:81456585|81457410","exon_intersect_chr17:81457410|81457592"]
["chr17:81824554|81825785:-","chr17:81822412|81823311:-_chr17:81823412|81823505:-_chr17:81824287|81824405:-_chr17:81824499|81824554:-_chr17:81825785|81826515:-_chr17:81833238|81833271:-","UN_MCRIP1_LS0124","MCRIP1","protein coding gene","no",4.95,0,0,0.007,65,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr17:81824499|81826662","exon_intersect_chr17:81824499|81826662"]
["chr17:81834833|81839440:-","chr17:81833515|81833852:-_chr17:81834503|81834653:-_chr17:81834764|81834833:-_chr17:81839440|81842111:-","UN_MCRIP1_UP_LS0004","MCRIP1","protein coding gene","no",2.88,0,0,0.005,48,0,0,"0(0)","ACC","no","NA","NA","NA","exon_intersect_chr17:81834764|81835050"]
["chr17:81957074|81958335:-","chr17:81952455|81953267:-_chr17:81953858|81954303:-_chr17:81955397|81955544:-_chr17:81956650|81956750:-_chr17:81956883|81957074:-_chr17:81958335|81958393:-_chr17:81958935|81958995:-_chr17:81959471|81959566:-_chr17:81959640|81959692:-_chr17:81960587|81961385:-","UN_NOTUM_LS0019","NOTUM","protein coding gene","no",2.71,0,0,0.013,123,0,0,"0(0)","STAD;UCS","no","NA","NA","exon_intersect_chr17:81958335|81958393","intron_intersect_chr17:81957074|81957806"]
["chr17:82372340|82372598:+","chr17:82372259|82372340:+_chr17:82372598|82372783:+_chr17:82374243|82377079:+","UN_UTS2R_UP_LS0008","UTS2R","protein coding gene","no",1.46,0,0,0.004,43,0,0,"0(0)","DLBC;TGCT;THYM","no","NA","NA","NA","NA"]
["chr17:82939476|82941066:+","chr17:82752158|82752377:+_chr17:82756165|82756215:+_chr17:82763965|82764062:+_chr17:82766267|82766368:+_chr17:82768420|82768566:+_chr17:82772452|82772507:+_chr17:82781589|82781721:+_chr17:82797757|82797802:+_chr17:82800864|82800996:+_chr17:82805875|82806011:+_chr17:82807608|82807668:+_chr17:82809708|82809782:+_chr17:82814840|82814934:+_chr17:82870224|82870380:+_chr17:82884145|82884202:+_chr17:82889668|82889697:+_chr17:82893547|82893632:+_chr17:82900651|82900731:+_chr17:82903405|82903478:+_chr17:82905936|82906053:+_chr17:82907761|82907821:+_chr17:82909285|82909307:+_chr17:82911758|82911789:+_chr17:82920556|82920618:+_chr17:82921501|82921577:+_chr17:82923652|82923733:+_chr17:82924939|82925057:+_chr17:82926400|82926491:+_chr17:82927186|82927323:+_chr17:82927905|82927988:+_chr17:82929113|82929271:+_chr17:82929362|82930643:+_chr17:82932658|82932735:+_chr17:82937271|82937360:+_chr17:82938049|82938136:+_chr17:82939367|82939476:+_chr17:82941066|82941483:+_chr17:82942449|82942571:+","UN_TBCD_LS0134","TBCD","protein coding gene","no",9.31,0,0,0.004,38,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr17:82939476|82941399","intron_intersect_chr17:82939476|82941399"]
["chr17:9250645|9331365:-","chr17:9250487|9250645:-_chr17:9331365|9331684:-","UN_STX8_LS0002","STX8","protein coding gene","no",7.54,0,0,0.024,233,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr17:9305651|9377889","intron_intersect_chr17:9250645|9273222"]
["chr18:10745514|10746459:+","chr18:10745461|10745514:+_chr18:10746459|10746634:+_chr18:10747120|10747452:+","UN_PIEZO2_LS0015","PIEZO2","protein coding gene","no",2.68,0,0,0.001,12,0,0,"0(0)","TGCT","no","TE_intersect_:10745207|chr18|10745207|10746242|L2c:L2:LINE|322|+","TE_intersect_:10746406|chr18|10746406|10746560|L2c:L2:LINE|323|+","intron_intersect_chr18:10744231|10748467","intron_intersect_chr18:10744231|10748467"]
["chr18:12427323|12431150:+","chr18:12427104|12427111:+_chr18:12427221|12427323:+_chr18:12431150|12432238:+","UN_PRELID3A_LS0009","PRELID3A","protein coding gene","no",3.16,0,0,0.006,53,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr18:12427323|12429350","exon_intersect_chr18:12431150|12432238"]
["chr18:13584049|13621117:+","chr18:13542270|13542460:+_chr18:13583829|13584049:+_chr18:13621117|13621271:+_chr18:13643359|13643412:+_chr18:13645127|13645659:+","UN_LDLRAD4_LS0088","LDLRAD4","protein coding gene","no",1.97,0,0,0.008,72,0,0,"0(0)","BRCA","no","NA","NA","intron_intersect_chr18:13565035|13585366","exon_intersect_chr18:13620868|13621271"]
["chr18:14731158|14731257:-","chr18:14726742|14730674:-_chr18:14731105|14731158:-_chr18:14731257|14731405:-_chr18:14735705|14735927:-_chr18:14747313|14748243:-","UN_ANKRD30B_LS0005","ANKRD30B","protein coding gene","no",4.19,0,0,0.004,38,0,0,"0(0)","UVM","no","TE_intersect_:14731076|chr18|14731076|14731365|ERV3-16A3_I-int:ERVL:LTR|286|+","TE_intersect_:14731076|chr18|14731076|14731365|ERV3-16A3_I-int:ERVL:LTR|286|+","intron_intersect_chr18:14728514|14748240","intron_intersect_chr18:14728514|14748240"]
["chr18:15000013|15000090:-","chr18:14997117|15000013:-_chr18:15000090|15000173:-_chr18:15001779|15002832:-","UN_AP005242.4_UP_LS0001","AP005242.4","lncRNA gene","no",2.07,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr18:21666176|21674385:+","chr18:21664538|21666176:+_chr18:21674385|21682895:+","UN_ABHD3_LS0016","ABHD3","protein coding gene","no",3.91,0,0,0.001,14,0,0,"0(0)","LAML","no","TE_intersect_:21666022|chr18|21666022|21666193|AluSz:Alu:SINE|129|-","TE_intersect_:21674226|chr18|21674226|21674547|AluJb:Alu:SINE|118|-","intron_intersect_chr18:21664534|21673628","intron_intersect_chr18:21673663|21682151"]
["chr18:22968918|22982218:+","chr18:22968842|22968918:+_chr18:22982218|22982393:+_chr18:22984886|22984990:+_chr18:22989221|22989318:+_chr18:22990937|22991049:+_chr18:22992748|22993569:+","UN_RBBP8_LS0053","RBBP8","protein coding gene","yes",1.62,0,0,0.004,41,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr18:22968918|22975153","exon_intersect_chr18:22982218|22982393"]
["chr18:24399373|24401100:+","chr18:24397932|24399373:+_chr18:24401100|24402714:+","UN_AC023983.2_UP_LS0007","AC023983.2","lncRNA gene","no",1.75,0,0,0.007,63,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:24399247|chr18|24399247|24399530|AluSq:Alu:SINE|134|-","NA","NA","NA"]
["chr18:26813541|26818043:+","chr18:26813304|26813541:+_chr18:26818043|26818155:+_chr18:26853612|26853994:+","UN_AQP4-AS1_LS0057","AQP4-AS1","lncRNA gene","no",0.36,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","TE_intersect_:26817696|chr18|26817696|26819497|L1MA8:L1:LINE|245|-","intron_intersect_chr18:26764331|26822813","intron_intersect_chr18:26764331|26822813"]
["chr18:27959543|27960873:+","chr18:27813121|27813476:+_chr18:27874608|27874670:+_chr18:27954518|27954627:+_chr18:27959515|27959543:+_chr18:27960873|27960967:+_chr18:27963386|27963687:+","UN_CDH2_LS0006","CDH2","protein coding gene","no",3.29,0,0,0.004,40,0,0,"0(0)","GBM","no","NA","TE_intersect_:27960759|chr18|27960759|27960875|Tigger16b:TcMar-Tigger:DNA|281|-","intron_intersect_chr18:27959543|27963357","intron_intersect_chr18:27959543|27963357"]
["chr18:28696445|28720937:+","chr18:28694693|28696445:+_chr18:28720937|28721087:+_chr18:28919149|28919242:+_chr18:29085336|29085471:+","UN_AC090365.1_LS0006","AC090365.1","lncRNA gene","no",1.52,0,0,0.002,20,0,0,"0(0)","OV","no","TE_intersect_:28695442|chr18|28695442|28698448|HERVH-int:ERV1:LTR|93|-","NA","NA","NA"]
["chr18:29156974|29171962:+","chr18:29156790|29156974:+_chr18:29171962|29172057:+_chr18:29172743|29175606:+","UN_AC117569.1_UP_LS0007","AC117569.1","lncRNA gene","no",3.15,0,0,0.014,132,0,0,"0(0)","ESCA;HNSC;LUSC","no","NA","TE_intersect_:29171785|chr18|29171785|29172163|THE1C:ERVL-MaLR:LTR|105|-","NA","NA"]
["chr18:32972548|32974547:-","chr18:32970893|32972548:-_chr18:32974547|32974751:-","UN_CCDC178_LS0014","CCDC178","protein coding gene","no",2.05,0,0,0.004,43,0,0,"0(0)","OV","no","NA","TE_intersect_:32970979|chr18|32970979|32972576|L1PA8:L1:LINE|86|-","exon_intersect_chr18:32974547|32974681","intron_intersect_chr18:32958221|32974547"]
["chr18:35241109|35241602:+","chr18:35241057|35241109:+_chr18:35241602|35241690:+_chr18:35242391|35242884:+_chr18:35243152|35243293:+_chr18:35245262|35249803:+","UN_ZNF397_LS0002","ZNF397","protein coding gene","no",0.67,0,0,0.009,88,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr18:35241030|35241690","exon_intersect_chr18:35241030|35241690"]
["chr18:36959435|37066868:+","chr18:36829131|36829196:+_chr18:36834320|36834355:+_chr18:36835234|36835376:+_chr18:36844208|36844302:+_chr18:36885557|36885672:+_chr18:36959308|36959435:+_chr18:37066868|37067545:+_chr18:37160200|37160381:+_chr18:37172973|37173081:+_chr18:37222017|37225324:+","UN_KIAA1328_LS0025","KIAA1328","protein coding gene","no",2.06,0,0,0.004,38,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr18:36959435|37066866","exon_intersect_chr18:37066866|37067545"]
["chr18:39018445|39025595:+","chr18:39012628|39014020:+_chr18:39015570|39015635:+_chr18:39018348|39018445:+_chr18:39025595|39026701:+","UN_RNU6-706P_UP_LS0039","RNU6-706P","small non-coding RNA gene","no",3.08,0,0,0.015,145,0,0,"0(0)","BLCA;LUSC;SKCM","no","NA","NA","NA","NA"]
["chr18:4002504|4013619:+","chr18:3993032|3993202:+_chr18:3995217|3995349:+_chr18:3995608|3995716:+_chr18:3998392|3998536:+_chr18:4002303|4002504:+_chr18:4013619|4014689:+","UN_DLGAP1_LS0152","DLGAP1","protein coding gene","no",4.74,0,0,0.001,12,0,0,"0(0)","MESO","no","TE_intersect_:4002320|chr18|4002320|4002765|Tigger2a:TcMar-Tigger:DNA|164|+","TE_intersect_:4013559|chr18|4013559|4013687|L2:L2:LINE|352|+","intron_intersect_chr18:3995716|4005025","exon_intersect_chr18:4013619|4013943"]
["chr18:42645554|42649506:-","chr18:42645389|42645554:-_chr18:42649506|42649824:-_chr18:42651028|42651135:-_chr18:42655331|42655414:-_chr18:42706550|42706728:-","UN_LINC00907_LS0012","LINC00907","lncRNA gene","no",3.12,0,0,0.003,27,0,0,"0(0)","TGCT","no","TE_intersect_:42649472|chr18|42649472|42649837|MLT1A0:ERVL-MaLR:LTR|202|-","NA","intron_intersect_chr18:42575191|42678848","intron_intersect_chr18:42575191|42678848"]
["chr18:45651763|45666137:+","chr18:45651482|45651763:+_chr18:45666137|45666219:+_chr18:45666935|45667094:+_chr18:45667833|45668022:+_chr18:45668349|45668477:+_chr18:45669306|45669498:+_chr18:45672900|45673047:+_chr18:45673683|45673817:+_chr18:45678975|45679024:+_chr18:45682319|45683688:+","UN_SLC14A2_LS0049","SLC14A2","protein coding gene","no",4.76,0,0,0.003,24,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr18:45647937|45663785","exon_intersect_chr18:45666137|45666219"]
["chr18:47934492|47940389:-","chr18:47932165|47932570:-_chr18:47934413|47934492:-_chr18:47940389|47940621:-","UN_SMAD2_UP_LS0005","SMAD2","protein coding gene","yes",6.03,0,0,0.013,121,0,0,"0(0)","OV","no","NA","TE_intersect_:47934452|chr18|47934452|47934507|L2c:L2:LINE|296|+","NA","NA"]
["chr18:48029911|48030097:-","chr18:48029666|48029911:-_chr18:48030097|48030445:-","UN_ZBTB7C_LS0031","ZBTB7C","protein coding gene","yes",3.81,0,0,0.007,63,0,0,"0(0)","LUSC","no","NA","NA","intron_intersect_chr18:48029911|48039900","intron_intersect_chr18:48029911|48039900"]
["chr18:49554709|49557328:-","chr18:49552948|49554709:-_chr18:49557328|49557425:-_chr18:49578178|49579030:-","UN_SRP72P1_UP_LS0012","SRP72P1","pseudogene","no",7.06,0,0,0.005,52,0,0,"0(0)","ESCA","no","TE_intersect_:49557170|chr18|49557170|49557452|AluSx:Alu:SINE|138|+","TE_intersect_:49554432|chr18|49554432|49554730|AluSg:Alu:SINE|134|+","NA","NA"]
["chr18:51076679|51076729:+","chr18:51067113|51067187:+_chr18:51076638|51076679:+_chr18:51076729|51076776:+_chr18:51078256|51085039:+","UN_SMAD4_LS0020","SMAD4","protein coding gene","yes",5.28,0,0,0.003,32,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr18:51076638|51077130","exon_intersect_chr18:51076638|51077130"]
["chr18:55721268|55721415:+","chr18:55721063|55721268:+_chr18:55721415|55721534:+_chr18:55754065|55757200:+","UN_AC022031.2_LS0002","AC022031.2","lncRNA gene","no",0.8,0,0,0.007,65,0,0,"0(0)","LUSC;THYM","no","TE_intersect_:55715484|chr18|55715484|55721529|L1PA2:L1:LINE|24|-","TE_intersect_:55715484|chr18|55715484|55721529|L1PA2:L1:LINE|24|-","exon_intersect_chr18:55721063|55721534","exon_intersect_chr18:55721063|55721534"]
["chr18:57058750|57069810:-","chr18:57054559|57056710:-_chr18:57057500|57058000:-_chr18:57058678|57058750:-_chr18:57069810|57070003:-_chr18:57071904|57072119:-","LINC-ROR_LS005","LINC-ROR","lncRNA gene","no",3.15,0,0,0.002,20,0,0,"0(0)","TGCT","yes","TE_intersect_:57068957|chr18|57068957|57072049|HERVH-int:ERV1:LTR|94|-","NA","exon_intersect_chr18:57069810|57070003","intron_intersect_chr18:57058000|57069810"]
["chr18:58653534|58658510:+","chr18:58653456|58653534:+_chr18:58658510|58658631:+_chr18:58659863|58660013:+_chr18:58660432|58660570:+_chr18:58667901|58668232:+","UN_AC104971.3_UP_LS0001","AC104971.3","lncRNA gene","no",2.21,0,0,0.004,40,0,0,"0(0)","DLBC;LIHC","no","TE_intersect_:58653200|chr18|58653200|58653559|THE1B:ERVL-MaLR:LTR|124|-","TE_intersect_:58658485|chr18|58658485|58658789|AluSz:Alu:SINE|99|-","NA","NA"]
["chr18:60086985|60089882:-","chr18:60086736|60086985:-_chr18:60089882|60089984:-_chr18:60120205|60120360:-","UN_SINHCAFP2_UP_LS0006","SINHCAFP2","pseudogene","no",2.42,0,0,0.006,58,0,0,"0(0)","READ;STAD","no","NA","NA","NA","NA"]
["chr18:6244588|6255191:-","chr18:5954706|5956387:-_chr18:5960094|5960156:-_chr18:5969393|5969562:-_chr18:6080881|6080951:-_chr18:6093355|6093528:-_chr18:6138194|6138296:-_chr18:6171828|6171942:-_chr18:6213149|6213259:-_chr18:6215750|6215835:-_chr18:6237964|6238040:-_chr18:6239718|6239872:-_chr18:6241358|6241449:-_chr18:6243294|6243429:-_chr18:6244484|6244588:-_chr18:6255191|6255488:-","UN_L3MBTL4_LS0047","L3MBTL4","protein coding gene","yes",1.53,0,0,0.012,112,0,0,"0(0)","SKCM;UVM","no","NA","NA","intron_intersect_chr18:6244588|6256747","intron_intersect_chr18:6244588|6256747"]
["chr18:62805267|62805302:+","chr18:62771034|62805267:+_chr18:62805302|62808729:+","UN_PHLPP1_LS0010","PHLPP1","protein coding gene","yes",7.09,0,0,0.001,12,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr18:62779568|62830035","intron_intersect_chr18:62779568|62830035"]
["chr18:65286424|65354178:-","chr18:65278405|65286424:-_chr18:65354178|65354311:-_chr18:65358425|65358590:-","UN_AC007948.1_UP_LS0004","AC007948.1","lncRNA gene","no",6.41,0,0,0.009,84,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr18:66538666|66543971:-","chr18:66501187|66505302:-_chr18:66529845|66529966:-_chr18:66534986|66535107:-_chr18:66538529|66538666:-_chr18:66543971|66544224:-_chr18:66544719|66544903:-_chr18:66551094|66551258:-_chr18:66554405|66554524:-_chr18:66568416|66568710:-_chr18:66572010|66572171:-","UN_CDH19_LS0013","CDH19","protein coding gene","no",3.68,0,0,0.003,28,0,0,"0(0)","SKCM","no","NA","TE_intersect_:66538626|chr18|66538626|66539044|MLT1C:ERVL-MaLR:LTR|233|-","exon_intersect_chr18:66543971|66544224","intron_intersect_chr18:66535107|66543971"]
["chr18:70490257|70526065:+","chr18:70418302|70418967:+_chr18:70434040|70434160:+_chr18:70436431|70436601:+_chr18:70490055|70490257:+_chr18:70526065|70526257:+_chr18:70531696|70531787:+_chr18:70756201|70756445:+_chr18:70769959|70770965:+","UN_AC090415.1_UP_LS0005","AC090415.1","pseudogene","no",4.77,0,0,0.002,16,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr18:70489630|70491205","NA"]
["chr18:73332581|73340257:+","chr18:73324941|73327188:+_chr18:73332463|73332581:+_chr18:73340257|73340438:+_chr18:73343849|73343944:+_chr18:73348527|73348579:+_chr18:73349084|73349878:+","UN_LINC02582_LS0018","LINC02582","lncRNA gene","no",7.45,0,0,0.008,81,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr18:73332581|73333374","intron_intersect_chr18:73333842|73349084"]
["chr18:74131355|74135360:+","chr18:74128401|74128585:+_chr18:74131286|74131355:+_chr18:74135360|74135756:+","UN_FBXO15_LS0017","FBXO15","protein coding gene","no",3.88,0,0,0.022,206,0,0,"0(0)","GBM;LGG","no","TE_intersect_:74131191|chr18|74131191|74131410|MIR:MIR:SINE|249|-","TE_intersect_:74135240|chr18|74135240|74135401|LTR79:ERVL:LTR|239|+","intron_intersect_chr18:74130799|74135762","intron_intersect_chr18:74130799|74135762"]
["chr18:77256223|77330145:+","chr18:77250549|77251214:+_chr18:77256158|77256223:+_chr18:77330145|77331361:+","UN_AC124254.1_UP_LS0001","AC124254.1","lncRNA gene","no",3.3,0,0,0.003,25,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr18:77256223|77268585","NA"]
["chr18:78670002|78670216:-","chr18:78663717|78666200:-_chr18:78669885|78670002:-_chr18:78670216|78670440:-_chr18:78670911|78672330:-","UN_RF00019_UP_LS1009","RF00019","small non-coding RNA gene","no",9.57,0,0,0.004,41,0,0,"0(0)","READ","no","NA","NA","NA","NA"]
["chr18:79584362|79585190:-","chr18:79583313|79583573:-_chr18:79584164|79584362:-_chr18:79585190|79585348:-_chr18:79586154|79586225:-","UN_AC068473.3_LS0017","AC068473.3","lncRNA gene","no",2.96,0,0,0.004,38,0,0,"0(0)","OV","no","NA","TE_intersect_:79584283|chr18|79584283|79584444|MLT1C:ERVL-MaLR:LTR|255|-","exon_intersect_chr18:79585071|79585290","intron_intersect_chr18:79581710|79585071"]
["chr18:9111784|9113089:-","chr18:9104227|9111784:-_chr18:9113089|9117389:-","UN_NDUFV2_LS0002","NDUFV2","protein coding gene","no",2.37,0,0,0.002,21,0,0,"0(0)","LAML","no","TE_intersect_:9113086|chr18|9113086|9113138|MIR:MIR:SINE|173|+","TE_intersect_:9111728|chr18|9111728|9111817|MIR:MIR:SINE|247|-","intron_intersect_chr18:9112738|9115669","intron_intersect_chr18:9104979|9112404"]
["chr19:10266794|10294580:-","chr19:10252268|10252827:-_chr19:10260212|10260428:-_chr19:10266690|10266794:-_chr19:10294580|10294757:-_chr19:10295129|10295337:-","UN_AC011511.3_UP_LS0003","AC011511.3","lncRNA gene","no",4.4,0,0,0.005,45,0,0,"0(0)","KICH","no","NA","NA","exon_intersect_chr19:10294401|10294640","intron_intersect_chr19:10260428|10270835"]
["chr19:1049462|1050921:+","chr19:1045520|1045619:+_chr19:1046230|1046406:+_chr19:1046802|1047024:+_chr19:1047157|1047378:+_chr19:1047453|1047654:+_chr19:1048895|1049005:+_chr19:1049266|1049462:+_chr19:1050921|1051052:+_chr19:1051155|1051294:+_chr19:1051449|1051586:+_chr19:1051942|1052126:+_chr19:1052214|1052286:+_chr19:1053329|1053531:+_chr19:1053788|1053836:+_chr19:1054006|1054110:+_chr19:1054193|1054341:+_chr19:1054780|1054878:+_chr19:1055097|1055351:+_chr19:1055907|1055939:+_chr19:1056066|1056243:+_chr19:1056330|1056499:+_chr19:1056907|1057084:+_chr19:1057314|1057429:+_chr19:1057969|1058059:+_chr19:1058146|1058269:+_chr19:1058618|1058747:+_chr19:1058820|1058940:+_chr19:1059023|1059085:+_chr19:1061782|1061888:+_chr19:1062172|1062313:+_chr19:1063544|1063678:+_chr19:1063760|1063863:+_chr19:1064161|1064253:+_chr19:1064931|1065171:+_chr19:1065270|1065580:+","UN_ABCA7_LS0020","ABCA7","protein coding gene","no",2.62,0,0,0.007,69,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr19:1049437|1050921","exon_intersect_chr19:1050921|1051052"]
["chr19:11422861|11423768:-","chr19:11420604|11420947:-_chr19:11421128|11421212:-_chr19:11421677|11421832:-_chr19:11422471|11422627:-_chr19:11422701|11422861:-_chr19:11423768|11424236:-","UN_CCDC151_LS0009","CCDC151","protein coding gene","no",1.26,0,0,0.001,12,0,0,"0(0)","KICH","no","TE_intersect_:11423609|chr19|11423609|11423784|L2:L2:LINE|216|-","NA","intron_intersect_chr19:11422861|11423877","intron_intersect_chr19:11422861|11423877"]
["chr19:11868931|11912313:-","chr19:11868742|11868931:-_chr19:11912313|11913408:-","UN_AC008543.4_UP_LS0005","AC008543.4","lncRNA gene","no",2.59,0,0,0.004,35,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr19:11906267|11913409","exon_intersect_chr19:11867306|11869491"]
["chr19:12643570|12643847:-","chr19:12643099|12643570:-_chr19:12643847|12643919:-","UN_RPL10P16_LS0034","RPL10P16","pseudogene","no",81.72,4.17,0,0.003,27,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr19:12643275|12643946","exon_intersect_chr19:12643275|12643946"]
["chr19:12826075|12826785:+","chr19:12825994|12826075:+_chr19:12826785|12826892:+_chr19:12832555|12832983:+","UN_HOOK2_LS0286","HOOK2","protein coding gene","no",2.45,0,0,0.001,12,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr19:12825478|12826666","exon_intersect_chr19:12826775|12826871"]
["chr19:13097484|13098363:-","chr19:13097328|13097484:-_chr19:13098363|13098523:-_chr19:13098546|13098713:-","UN_NFIX_LS0131","NFIX","protein coding gene","no",2.34,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:13094635|13098796","exon_intersect_chr19:13094635|13098796"]
["chr19:13809220|13814515:+","chr19:13804729|13805148:+_chr19:13808836|13808984:+_chr19:13809070|13809220:+_chr19:13814515|13814865:+_chr19:13817216|13817353:+_chr19:13817722|13817976:+_chr19:13819357|13819492:+_chr19:13823346|13823500:+_chr19:13825550|13825713:+_chr19:13828645|13828726:+_chr19:13830191|13832220:+","UN_ZSWIM4_LS0014","ZSWIM4","protein coding gene","no",1.88,0,0,0.009,83,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr19:13809220|13812997","exon_intersect_chr19:13814515|13814865"]
["chr19:14056804|14057527:-","chr19:14053367|14055226:-_chr19:14055380|14055425:-_chr19:14056429|14056513:-_chr19:14056662|14056804:-_chr19:14057527|14057599:-","UN_PALM3_LS0018","PALM3","protein coding gene","no",1.45,0,0,0.005,47,0,0,"0(0)","GBM;TGCT","no","NA","NA","exon_intersect_chr19:14057351|14057599","exon_intersect_chr19:14056662|14056907"]
["chr19:14571570|14571889:-","chr19:14568229|14571570:-_chr19:14571889|14572062:-","UN_NDUFB7_LS0006","NDUFB7","protein coding gene","no",2.41,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","TE_intersect_:14571313|chr19|14571313|14571616|AluSz:Alu:SINE|122|+","exon_intersect_chr19:14571889|14572062","intron_intersect_chr19:14566933|14571889"]
["chr19:1508109|1510150:-","chr19:1505041|1506316:-_chr19:1506590|1506928:-_chr19:1507242|1507405:-_chr19:1507545|1507643:-_chr19:1507998|1508109:-_chr19:1510150|1510258:-_chr19:1510368|1510428:-_chr19:1510639|1510730:-_chr19:1510845|1510917:-_chr19:1512963|1513019:-","UN_ADAMTSL5_LS0005","ADAMTSL5","protein coding gene","no",1.39,0,0,0.008,75,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr19:1510150|1510258","intron_intersect_chr19:1508109|1508375"]
["chr19:15769714|15770043:-","chr19:15758795|15760420:-_chr19:15760815|15760897:-_chr19:15761085|15761149:-_chr19:15761260|15761375:-_chr19:15769585|15769714:-_chr19:15770043|15770179:-_chr19:15770986|15771255:-_chr19:15772036|15772157:-_chr19:15772622|15772874:-_chr19:15774063|15774190:-_chr19:15774284|15774337:-_chr19:15776398|15776542:-_chr19:15779713|15780026:-","UN_CYP4F24P_LS0007","CYP4F24P","pseudogene","no",2.76,0.02,0,0.003,30,0.001,1,"0(0)","GBM","no","NA","NA","intron_intersect_chr19:15769979|15770797","intron_intersect_chr19:15769714|15769913"]
["chr19:16680570|16682421:+","chr19:16661261|16661341:+_chr19:16679984|16680140:+_chr19:16680397|16680570:+_chr19:16682421|16682508:+_chr19:16686288|16686405:+_chr19:16688144|16690029:+","UN_TMEM38A_LS0005","TMEM38A","protein coding gene","no",13.18,0.81,0,0.003,26,0.003,2,"0(0)","KICH","no","NA","NA","exon_intersect_chr19:16680397|16680937","exon_intersect_chr19:16682421|16682508"]
["chr19:1747069|1748162:+","chr19:1746961|1747069:+_chr19:1748162|1748719:+","UN_ONECUT3_UP_LS0003","ONECUT3","protein coding gene","no",1.8,0,0,0.006,61,0,0,"0(0)","STAD","no","TE_intersect_:1747057|chr19|1747057|1747170|MIR:MIR:SINE|239|+","NA","NA","exon_intersect_chr19:1748160|1748341"]
["chr19:17859974|17861425:+","chr19:17859953|17859974:+_chr19:17861425|17861472:+_chr19:17862094|17862223:+_chr19:17862918|17863027:+_chr19:17863171|17863304:+","RPL18A_LS005","RPL18A","protein coding gene","no",50.39,0,0,0.007,64,0,0,"0(0)","OV;READ","yes","NA","NA","intron_intersect_chr19:17859974|17860125","exon_intersect_chr19:17860763|17862907"]
["chr19:18309253|18309650:+","chr19:18309128|18309253:+_chr19:18309650|18309801:+_chr19:18315733|18315834:+_chr19:18321734|18321997:+","UN_LSM4_LS0021","LSM4","protein coding gene","no",2.28,0,0,0.009,89,0,0,"0(0)","SKCM;UVM","no","NA","NA","intron_intersect_chr19:18307555|18309291","exon_intersect_chr19:18309291|18309861"]
["chr19:18867361|18867424:-","chr19:18867170|18867361:-_chr19:18867424|18867775:-_chr19:18867865|18868025:-","UN_UPF1_LS0062","UPF1","protein coding gene","no",3.35,0,0,0.007,67,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr19:18866521|18868236","exon_intersect_chr19:18866521|18868236"]
["chr19:19627504|19627760:-","chr19:19623669|19624569:-_chr19:19626543|19627284:-_chr19:19627397|19627504:-_chr19:19627760|19627951:-","UN_LPAR2_LS0029","LPAR2","protein coding gene","no",2.49,0,0,0.006,58,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr19:19626543|19627969","exon_intersect_chr19:19626543|19627969"]
["chr19:199563|199661:-","chr19:196939|199129:-_chr19:199175|199563:-_chr19:199661|199904:-_chr19:200293|201662:-_chr19:201756|201813:-_chr19:203875|204065:-_chr19:204844|205068:-","UN_AC010507.1_LS0067","AC010507.1","pseudogene","no",3.96,0,0,0.002,18,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr19:20149370|20149560:-","chr19:20148799|20149370:-_chr19:20149560|20149731:-_chr19:20149908|20150006:-_chr19:20530100|20530290:-","UN_AC011447.2_LS0018","AC011447.2","pseudogene","no",1.64,0,0,0.003,24,0,0,"0(0)","ESCA","no","TE_intersect_:20148767|chr19|20148767|20150702|SVA_F:SVA:Retroposon|91|-","TE_intersect_:20148767|chr19|20148767|20150702|SVA_F:SVA:Retroposon|91|-","intron_intersect_chr19:20137233|20150361","intron_intersect_chr19:20137233|20150361"]
["chr19:20751157|20751825:-","chr19:20746923|20750132:-_chr19:20750238|20750387:-_chr19:20750916|20751157:-_chr19:20751825|20755250:-","UN_AC010329.1_LS0015","AC010329.1","lncRNA gene","no",0.22,0,0,0.005,46,0,0,"0(0)","THCA","no","TE_intersect_:20747318|chr19|20747318|20755137|HERVE-int:ERV1:LTR|2|-","TE_intersect_:20747318|chr19|20747318|20755137|HERVE-int:ERV1:LTR|2|-","exon_intersect_chr19:20746923|20755250","exon_intersect_chr19:20746923|20755250"]
["chr19:211885|218728:-","chr19:196905|198401:-_chr19:199175|199272:-_chr19:199661|199807:-_chr19:200293|201662:-_chr19:201756|201813:-_chr19:203875|204065:-_chr19:204844|205076:-_chr19:205170|207857:-_chr19:208327|208391:-_chr19:211762|211885:-_chr19:218728|218917:-_chr19:221141|221224:-","UN_LINC01002_LS0006","LINC01002","lncRNA gene","no",1.5,0,0,0.003,31,0,0,"0(0)","ESCA","no","TE_intersect_:218493|chr19|218493|218803|MER21C:ERVL:LTR|224|+","TE_intersect_:211604|chr19|211604|211898|AluJr:Alu:SINE|238|+","NA","NA"]
["chr19:21883387|21901523:-","chr19:21880339|21883387:-_chr19:21901523|21901671:-_chr19:21925072|21925195:-_chr19:21933027|21933237:-_chr19:21974729|21974807:-_chr19:21987216|21987311:-_chr19:21988783|21988909:-_chr19:22010792|22010919:-","UN_ZNF43_UP_LS0020","ZNF43","protein coding gene","no",2.14,0,0,0.003,32,0,0,"0(0)","OV","no","NA","TE_intersect_:21881272|chr19|21881272|21888355|HERVK13-int:ERVK:LTR|230|-","NA","NA"]
["chr19:2248382|2248540:-","chr19:2247768|2247893:-_chr19:2247981|2248382:-_chr19:2248540|2248715:-","UN_SF3A2_LS0123","SF3A2","protein coding gene","no",4.32,0,0,0.005,48,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr19:2247767|2248679","exon_intersect_chr19:2247767|2248679"]
["chr19:22654015|22698229:+","chr19:22634334|22634474:+_chr19:22653307|22653433:+_chr19:22653920|22654015:+_chr19:22698229|22702916:+","UN_RPL34P33_UP_LS0003","RPL34P33","pseudogene","no",1.59,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr19:22654015|22663800","exon_intersect_chr19:22698120|22698371"]
["chr19:22926741|22927275:+","chr19:22926632|22926741:+_chr19:22927275|22927771:+","UN_BNIP3P36_UP_LS0013","BNIP3P36","pseudogene","no",1.91,0,0,0.002,18,0,0,"0(0)","ESCA","no","TE_intersect_:22926609|chr19|22926609|22927226|SVA_F:SVA:Retroposon|106|+","TE_intersect_:22927116|chr19|22927116|22927579|SVA_F:SVA:Retroposon|98|+","NA","NA"]
["chr19:23549744|23549896:+","chr19:23549568|23549744:+_chr19:23549896|23550049:+_chr19:23551715|23551809:+_chr19:23557443|23557709:+_chr19:23558322|23558883:+","UN_ZNF675_LS0025","ZNF675","protein coding gene","no",3.44,0,0,0.013,128,0,0,"0(0)","OV","no","TE_intersect_:23549492|chr19|23549492|23549907|LTR7C:ERV1:LTR|165|+","TE_intersect_:23549492|chr19|23549492|23549907|LTR7C:ERV1:LTR|165|+","intron_intersect_chr19:23534317|23574057","intron_intersect_chr19:23534317|23574057"]
["chr19:2428313|2428380:+","chr19:2428166|2428313:+_chr19:2428380|2428479:+","UN_LMNB2_LS0002","LMNB2","protein coding gene","no",14.26,0,0,0.004,41,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr19:2428166|2430952","exon_intersect_chr19:2428166|2430952"]
["chr19:28312892|28314897:-","chr19:28311330|28312892:-_chr19:28314897|28315426:-","UN_AC005357.1_UP_LS0006","AC005357.1","pseudogene","no",1.86,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","NA","NA","intron_intersect_chr19:28312892|28313413"]
["chr19:28312892|28316506:-","chr19:28311434|28312892:-_chr19:28316506|28316884:-_chr19:28317271|28317364:-_chr19:28320200|28320859:-","UN_AC005357.1_UP_LS0007","AC005357.1","pseudogene","no",3.73,0,0,0.002,16,0,0,"0(0)","THYM","no","NA","NA","NA","intron_intersect_chr19:28312892|28313413"]
["chr19:28607438|28610260:+","chr19:28606561|28607438:+_chr19:28610260|28611190:+_chr19:28611912|28612061:+_chr19:28612439|28615539:+","UN_AC079466.1_LS0002","AC079466.1","lncRNA gene","no",5.89,0,0,0.013,122,0,0,"0(0)","KIRC;LIHC","no","TE_intersect_:28607295|chr19|28607295|28607441|HERVE-int:ERV1:LTR|250|+","TE_intersect_:28607467|chr19|28607467|28613524|HERVE-int:ERV1:LTR|147|+","intron_intersect_chr19:28607104|28610260","exon_intersect_chr19:28610260|28610331"]
["chr19:29657943|29663710:-","chr19:29656226|29657943:-_chr19:29663710|29663832:-","UN_AC011474.2_UP_LS0017","AC011474.2","lncRNA gene","no",1.77,0,0,0.006,61,0,0,"0(0)","ESCA","no","NA","TE_intersect_:29657636|chr19|29657636|29658089|MLT1F:ERVL-MaLR:LTR|247|-","NA","NA"]
["chr19:30269252|30269749:+","chr19:30269093|30269252:+_chr19:30269749|30272882:+","UN_ZNF536_LS0002","ZNF536","protein coding gene","no",3.55,0,0,0.004,34,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr19:30228715|30284072","intron_intersect_chr19:30228715|30284072"]
["chr19:32359655|32360504:+","chr19:32345625|32345783:+_chr19:32347245|32347338:+_chr19:32352829|32354957:+_chr19:32356616|32359655:+_chr19:32360504|32360618:+_chr19:32382467|32382601:+_chr19:32382717|32387739:+","UN_ZNF507_LS0012","ZNF507","protein coding gene","no",0.41,0.01,0,0.007,68,0.007,5,"0(0)","LAML","no","NA","NA","exon_intersect_chr19:32356616|32359793","exon_intersect_chr19:32360504|32360618"]
["chr19:34000398|34001787:-","chr19:33996946|33998551:-_chr19:34000341|34000398:-_chr19:34001787|34002220:-_chr19:34003595|34003707:-_chr19:34005339|34005421:-_chr19:34008416|34009558:-","UN_RN7SL150P_UP_LS0007","RN7SL150P","small non-coding RNA gene","no",3.73,0,0,0.003,28,0,0,"0(0)","SKCM","no","NA","NA","NA","NA"]
["chr19:3490410|3490522:+","chr19:3478486|3478969:+_chr19:3480335|3480518:+_chr19:3480788|3483853:+_chr19:3488128|3488255:+_chr19:3490092|3490410:+_chr19:3490522|3490822:+","UN_FZR1_UP_LS0014","FZR1","protein coding gene","yes",3.04,0,0,0.006,54,0,0,"0(0)","KICH;LAML","no","NA","NA","NA","NA"]
["chr19:35279223|35279273:-","chr19:35279150|35279223:-_chr19:35279273|35279453:-","UN_USF2_LS0054","USF2","protein coding gene","no",1.13,0,0,0.005,48,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:35276977|35279821","exon_intersect_chr19:35276977|35279821"]
["chr19:35345867|35346151:+","chr19:35341101|35341138:+_chr19:35341343|35341606:+_chr19:35341702|35341965:+_chr19:35344829|35344925:+_chr19:35345051|35345126:+_chr19:35345602|35345720:+_chr19:35345861|35345867:+_chr19:35346151|35346235:+_chr19:35346566|35346766:+","UN_CD22_LS0017","CD22","protein coding gene","no",10.27,0,0,0.002,19,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr19:35345720|35346151","exon_intersect_chr19:35346151|35346235"]
["chr19:35673545|35677812:+","chr19:35673200|35673545:+_chr19:35677812|35677895:+_chr19:35677975|35678481:+","UPK1A_LS012","UPK1A","protein coding gene","no",2.74,0,0,0.003,33,0,0,"0(0)","TGCT","yes","NA","NA","intron_intersect_chr19:35673545|35675840","exon_intersect_chr19:35677812|35677895"]
["chr19:36068010|36073342:+","chr19:36054990|36055148:+_chr19:36058780|36058871:+_chr19:36059968|36060030:+_chr19:36065958|36066015:+_chr19:36066257|36066427:+_chr19:36067306|36067443:+_chr19:36067828|36068010:+_chr19:36073342|36073531:+_chr19:36081433|36081570:+_chr19:36083063|36083241:+_chr19:36084653|36084744:+_chr19:36086687|36086812:+_chr19:36089038|36089105:+_chr19:36089185|36089306:+_chr19:36090445|36090520:+_chr19:36091200|36091311:+_chr19:36091402|36091465:+_chr19:36092689|36092811:+_chr19:36094031|36094164:+_chr19:36097027|36097079:+_chr19:36099399|36099617:+_chr19:36100748|36100875:+_chr19:36101214|36101317:+_chr19:36101664|36101774:+_chr19:36102014|36102851:+_chr19:36102948|36103074:+_chr19:36103156|36103207:+_chr19:36103343|36103981:+_chr19:36104518|36104675:+_chr19:36104768|36105103:+","UN_WDR62_LS0010","WDR62","protein coding gene","no",1.53,0,0,0.007,66,0,0,"0(0)","OV;STAD","no","NA","NA","intron_intersect_chr19:36068010|36070239","exon_intersect_chr19:36073342|36073531"]
["chr19:36325032|36330647:+","chr19:36324912|36325032:+_chr19:36330647|36330816:+","UN_LINC00665_LS0023","LINC00665","lncRNA gene","no",10.67,0,0,0.005,44,0,0,"0(0)","OV","no","TE_intersect_:36324872|chr19|36324872|36325429|LTR6B:ERV1:LTR|56|-","TE_intersect_:36330484|chr19|36330484|36331043|LTR6B:ERV1:LTR|56|-","exon_intersect_chr19:36324937|36327225","intron_intersect_chr19:36330492|36331447"]
["chr19:37257394|37260375:+","chr19:37251891|37252182:+_chr19:37255899|37255982:+_chr19:37256727|37256814:+_chr19:37257231|37257394:+_chr19:37260375|37265531:+","UN_LINC01535_LS0014","LINC01535","lncRNA gene","no",1.35,0,0,0.002,17,0,0,"0(0)","GBM","no","NA","TE_intersect_:37260186|chr19|37260186|37260483|AluSz:Alu:SINE|145|-","intron_intersect_chr19:37257394|37258948","intron_intersect_chr19:37259069|37262355"]
["chr19:38218656|38218931:-","chr19:38212072|38212133:-_chr19:38212280|38212391:-_chr19:38213644|38213756:-_chr19:38216140|38216259:-_chr19:38216353|38216403:-_chr19:38217460|38217591:-_chr19:38217812|38217876:-_chr19:38218573|38218656:-_chr19:38218931|38219058:-_chr19:38222357|38222464:-_chr19:38222548|38222708:-_chr19:38224114|38224225:-","UN_DPF1_LS0004","DPF1","protein coding gene","no",4.75,0,0,0.006,54,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr19:38218931|38219939","exon_intersect_chr19:38218573|38218662"]
["chr19:38596001|38596078:-","chr19:38587700|38587817:-_chr19:38593282|38593337:-_chr19:38595485|38595555:-_chr19:38595640|38595729:-_chr19:38595939|38596001:-_chr19:38596078|38596195:-","UN_MAP4K1_LS0008","MAP4K1","protein coding gene","yes",4,0.03,0,0.075,719,0.001,1,"0(0)","ACC;UCEC","no","NA","NA","intron_intersect_chr19:38596001|38596312","intron_intersect_chr19:38596001|38596312"]
["chr19:38849705|38849786:-","chr19:38845667|38845735:-_chr19:38845853|38846090:-_chr19:38847316|38847434:-_chr19:38849700|38849705:-_chr19:38849786|38849940:-","UN_HNRNPL_LS0050","HNRNPL","protein coding gene","no",3.91,0.14,0,0.001,14,0.001,1,"0(0)","DLBC","no","NA","NA","exon_intersect_chr19:38849700|38850333","exon_intersect_chr19:38849700|38850333"]
["chr19:39173872|39179190:-","chr19:39169557|39169676:-_chr19:39173036|39173250:-_chr19:39173596|39173872:-_chr19:39179190|39179361:-","UN_PAK4_LS0052","PAK4","protein coding gene","no",0.93,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:39178424|39182816","exon_intersect_chr19:39173576|39174010"]
["chr19:39529213|39532740:-","chr19:39528271|39529213:-_chr19:39532740|39532843:-","UN_RPS16_UP_LS0011","RPS16","protein coding gene","no",6.51,0,0,0.001,12,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr19:39530990|39532854","NA"]
["chr19:39965232|39970354:-","chr19:39964919|39965232:-_chr19:39970354|39970436:-_chr19:39970880|39970962:-","UN_PRR13P5_UP_LS0012","PRR13P5","pseudogene","no",1.89,0,0,0.004,40,0,0,"0(0)","OV","no","TE_intersect_:39970297|chr19|39970297|39970514|MIRb:MIR:SINE|261|+","TE_intersect_:39964943|chr19|39964943|39965265|AluSc:Alu:SINE|93|+","NA","NA"]
["chr19:40571474|40572019:+","chr19:40570629|40570728:+_chr19:40571315|40571474:+_chr19:40572019|40572192:+_chr19:40572338|40572380:+_chr19:40575411|40576458:+","UN_SPTBN4_LS0030","SPTBN4","protein coding gene","no",1.87,0,0,0.005,46,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr19:40571093|40571544","exon_intersect_chr19:40571544|40572632"]
["chr19:41353272|41353529:+","chr19:41352690|41352836:+_chr19:41353052|41353272:+_chr19:41353529|41353679:+","UN_AC011462.1_LS0029","AC011462.1","protein coding gene","no",3.04,0,0,0.002,19,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr19:41352690|41353911","exon_intersect_chr19:41352690|41353911"]
["chr19:41871411|41913892:+","chr19:41860257|41860289:+_chr19:41860775|41860845:+_chr19:41861112|41861212:+_chr19:41869031|41869214:+_chr19:41869699|41869753:+_chr19:41871351|41871411:+_chr19:41913892|41913902:+","UN_ZNF574_UP_LS0001","ZNF574","protein coding gene","no",4.41,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:41871351|41872926","intron_intersect_chr19:41910097|41923092"]
["chr19:42303378|42309579:+","chr19:42303307|42303378:+_chr19:42309579|42310813:+","UN_PRR19_LS0003","PRR19","protein coding gene","no",1.49,0,0,0.005,51,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr19:42302777|42303468","exon_intersect_chr19:42308774|42310821"]
["chr19:42755266|42763916:-","chr19:42752727|42753376:-_chr19:42754333|42754587:-_chr19:42754988|42755266:-_chr19:42763916|42764281:-_chr19:42855556|42855691:-","PSG8_LS005","PSG8","protein coding gene","no",0.48,0,0,0.007,66,0,0,"0(0)","CHOL;THCA","yes","NA","NA","exon_intersect_chr19:42763692|42764281","exon_intersect_chr19:42754233|42756124"]
["chr19:43349296|43350401:-","chr19:43348410|43349296:-_chr19:43350401|43350570:-_chr19:43356538|43356911:-","UN_AC005392.2_UP_LS0003","AC005392.2","lncRNA gene","no",4.03,0,0,0.004,43,0,0,"0(0)","ESCA;LUSC","no","TE_intersect_:43350344|chr19|43350344|43350528|MER4C:ERV1:LTR|116|-","NA","NA","NA"]
["chr19:4339214|4339498:+","chr19:4338941|4339214:+_chr19:4339498|4339619:+_chr19:4343256|4343491:+","UN_STAP2_LS0016","STAP2","protein coding gene","no",1.43,0,0,0.003,26,0,0,"0(0)","GBM","no","TE_intersect_:4339033|chr19|4339033|4339372|AluSx1:Alu:SINE|142|-","TE_intersect_:4339483|chr19|4339483|4339806|AluJb:Alu:SINE|195|-","intron_intersect_chr19:4338944|4339577","intron_intersect_chr19:4338944|4339577"]
["chr19:44812285|44813258:-","chr19:44812047|44812285:-_chr19:44813258|44813346:-","UN_BCAM_LS0029","BCAM","protein coding gene","no",1.85,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:44813148|44813346","exon_intersect_chr19:44812163|44812391"]
["chr19:44821091|44821247:-","chr19:44811222|44811292:-_chr19:44820953|44821091:-_chr19:44821247|44821422:-","UN_BCAM_LS0285","BCAM","protein coding gene","no",4.42,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:44820916|44821420","exon_intersect_chr19:44820916|44821420"]
["chr19:45395555|45395580:+","chr19:45395477|45395555:+_chr19:45395580|45395754:+","UN_PPP1R13L_LS0041","PPP1R13L","protein coding gene","yes",2.15,0,0,0.004,34,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr19:45394653|45395886","exon_intersect_chr19:45394653|45395886"]
["chr19:46124043|46124268:-","chr19:46120071|46120357:-_chr19:46123886|46124043:-_chr19:46124268|46124321:-_chr19:46124625|46124674:-","UN_IGFL3_LS0009","IGFL3","protein coding gene","no",4.32,0,0,0.007,63,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr19:46124268|46124321","exon_intersect_chr19:46123886|46124156"]
["chr19:46213010|46213350:+","chr19:46203187|46203656:+_chr19:46204052|46204214:+_chr19:46204805|46204920:+_chr19:46208932|46209169:+_chr19:46210162|46210269:+_chr19:46212790|46213010:+_chr19:46213350|46215506:+","UN_AC006262.1_LS0008","AC006262.1","lncRNA gene","no",3,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr19:46213010|46213329","exon_intersect_chr19:46213329|46213483"]
["chr19:47221391|47221490:+","chr19:47221104|47221391:+_chr19:47221490|47221949:+","UN_BBC3_LS0004","BBC3","protein coding gene","yes",2.42,0,0,0.004,36,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr19:47220822|47222568","exon_intersect_chr19:47220822|47222568"]
["chr19:47722196|47725812:+","chr19:47722107|47722196:+_chr19:47725812|47726224:+_chr19:47736369|47736533:+_chr19:47740881|47743134:+","UN_EHD2_LS0014","EHD2","protein coding gene","no",3.39,0,0,0.004,35,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr19:47718606|47725812","exon_intersect_chr19:47725812|47726319"]
["chr19:48270219|48271287:+","chr19:48270102|48270219:+_chr19:48271287|48271449:+_chr19:48271727|48271828:+_chr19:48279731|48279808:+_chr19:48282371|48282497:+_chr19:48285761|48285828:+","UN_ZNF114_LS0001","ZNF114","protein coding gene","no",7.09,0,0,0.011,103,0,0,"0(0)","BLCA","no","TE_intersect_:48270187|chr19|48270187|48270421|AluJr:Alu:SINE|165|+","NA","exon_intersect_chr19:48270145|48270233","exon_intersect_chr19:48271245|48271449"]
["chr19:48800297|48807000:-","chr19:48795100|48795464:-_chr19:48796428|48796502:-_chr19:48796578|48796718:-_chr19:48796937|48797022:-_chr19:48797191|48797333:-_chr19:48799675|48799838:-_chr19:48799981|48800100:-_chr19:48800187|48800297:-_chr19:48807000|48807074:-_chr19:48810984|48811012:-","UN_BCAT2_LS0012","BCAT2","protein coding gene","no",1.96,0,0,0.006,53,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr19:48807000|48808311","intron_intersect_chr19:48800297|48806517"]
["chr19:49049007|49050398:-","chr19:49047638|49047969:-_chr19:49048205|49048372:-_chr19:49048725|49049007:-_chr19:49050398|49050538:-","UN_NTF6B_UP_LS0013","NTF6B","pseudogene","no",4.77,0,0,0.024,233,0,0,"0(0)","BLCA;CESC;CHOL;ESCA;HNSC;PAAD","no","NA","NA","exon_intersect_chr19:49050217|49050846","exon_intersect_chr19:49048725|49049106"]
["chr19:4944450|4947105:+","chr19:4909498|4909655:+_chr19:4910876|4911038:+_chr19:4929222|4929476:+_chr19:4930716|4930876:+_chr19:4932741|4932956:+_chr19:4941528|4941628:+_chr19:4941745|4941931:+_chr19:4944132|4944450:+_chr19:4947105|4947211:+_chr19:4950611|4950773:+_chr19:4950859|4950996:+_chr19:4954350|4954488:+_chr19:4954650|4954822:+_chr19:4956709|4956813:+_chr19:4960657|4960952:+","UN_UHRF1_LS0024","UHRF1","protein coding gene","yes",1.57,0.03,0,0.003,33,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr19:4944450|4945861","exon_intersect_chr19:4947105|4947211"]
["chr19:49742016|49744231:-","chr19:49739757|49739932:-_chr19:49740059|49740183:-_chr19:49741885|49742016:-_chr19:49744231|49744404:-_chr19:49745202|49745396:-_chr19:49746470|49746798:-_chr19:49747389|49747472:-_chr19:49748085|49748168:-_chr19:49748374|49748469:-_chr19:49762004|49762232:-_chr19:49763078|49763220:-","UN_TSKS_LS0004","TSKS","protein coding gene","no",9.57,0,0,0.003,29,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr19:49744231|49744404","exon_intersect_chr19:49741885|49742020"]
["chr19:49884886|49886408:-","chr19:49869039|49870060:-_chr19:49871547|49871716:-_chr19:49871812|49871889:-_chr19:49872917|49873302:-_chr19:49877025|49877846:-_chr19:49878170|49878312:-_chr19:49878493|49878647:-_chr19:49878928|49879040:-_chr19:49884882|49884886:-_chr19:49886408|49886534:-_chr19:49887194|49887317:-","UN_TBC1D17_LS0062","TBC1D17","protein coding gene","no",8.25,0,0,0.004,39,0,0,"0(0)","OV","no","TE_intersect_:49886342|chr19|49886342|49886439|MIRc:MIR:SINE|330|-","NA","intron_intersect_chr19:49885534|49886551","intron_intersect_chr19:49884758|49885172"]
["chr19:50531798|50534061:+","chr19:50531618|50531798:+_chr19:50534061|50534831:+","UN_LRRC4B_LS0016","LRRC4B","protein coding gene","no",1.99,0,0,0.004,34,0,0,"0(0)","GBM","no","TE_intersect_:50531662|chr19|50531662|50531887|MIRb:MIR:SINE|256|+","TE_intersect_:50534044|chr19|50534044|50534193|L2a:L2:LINE|284|-","intron_intersect_chr19:50519415|50548542","intron_intersect_chr19:50519415|50548542"]
["chr19:50581550|50587057:+","chr19:50581199|50581550:+_chr19:50587057|50587552:+","UN_C19orf81_UP_LS0041","C19orf81","protein coding gene","no",3.81,0,0,0.002,23,0,0,"0(0)","TGCT","no","TE_intersect_:50581382|chr19|50581382|50581612|L1MEc:L1:LINE|305|+","TE_intersect_:50586994|chr19|50586994|50587384|L1ME3G:L1:LINE|256|+","NA","NA"]
["chr19:50639162|50658010:-","chr19:50621977|50622481:-_chr19:50622687|50622755:-_chr19:50625162|50625294:-_chr19:50625393|50625564:-_chr19:50625897|50626017:-_chr19:50629294|50629512:-_chr19:50629784|50630171:-_chr19:50632286|50632811:-_chr19:50637264|50637426:-_chr19:50639025|50639162:-_chr19:50658010|50658118:-","UN_LRRC4B_UP_LS0001","LRRC4B","protein coding gene","no",1.18,0,0,0.007,64,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr19:50657989|50658128","exon_intersect_chr19:50639025|50639306"]
["chr19:50854754|50856240:+","chr19:50830013|50830568:+_chr19:50831116|50831293:+_chr19:50853994|50854124:+_chr19:50854690|50854754:+_chr19:50856240|50856399:+_chr19:50858029|50858315:+_chr19:50858459|50858595:+_chr19:50859972|50860764:+","UN_KLK2_UP_LS0007","KLK2","protein coding gene","no",1.37,0,0,0.002,19,0,0,"0(0)","KICH","no","NA","NA","NA","exon_intersect_chr19:50854915|50856729"]
["chr19:51146863|51165221:-","chr19:51146470|51146863:-_chr19:51165221|51165273:-_chr19:51181474|51181966:-","UN_CTU1_UP_LS0004","CTU1","protein coding gene","no",1.85,0,0,0.009,84,0,0,"0(0)","OV;UCS","no","TE_intersect_:51163914|chr19|51163914|51165429|L1ME1:L1:LINE|285|+","NA","exon_intersect_chr19:51165221|51165273","intron_intersect_chr19:51146850|51146957"]
["chr19:51452633|51454139:-","chr19:51450997|51452633:-_chr19:51454139|51454315:-_chr19:51454684|51454780:-_chr19:51455418|51455687:-_chr19:51457184|51457231:-_chr19:51457934|51458452:-","UN_SIGLEC8_LS0002","SIGLEC8","protein coding gene","no",1.15,0,0,0.004,43,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr19:51452633|51454219","intron_intersect_chr19:51452633|51454219"]
["chr19:52453607|52456677:+","chr19:52453594|52453607:+_chr19:52456677|52456736:+_chr19:52456868|52456958:+_chr19:52491324|52491425:+_chr19:52501827|52501908:+_chr19:52504655|52504781:+_chr19:52510572|52512154:+","UN_ZNF578_LS0001","ZNF578","protein coding gene","no",1.68,0,0,0.004,39,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr19:52453576|52458836","exon_intersect_chr19:52453576|52458836"]
["chr19:52923675|52926963:-","chr19:52904415|52908179:-_chr19:52915196|52915322:-_chr19:52917859|52917931:-_chr19:52918819|52918937:-_chr19:52923369|52923675:-_chr19:52926963|52929397:-","UN_AC010487.3_LS0269","AC010487.3","protein coding gene","no",2.39,0,0,0.005,47,0,0,"0(0)","CHOL;STAD","no","TE_intersect_:52926766|chr19|52926766|52927061|AluSc8:Alu:SINE|105|-","TE_intersect_:52923621|chr19|52923621|52924121|LTR2B:ERV1:LTR|48|+","NA","exon_intersect_chr19:52923673|52924075"]
["chr19:53396251|53433059:+","chr19:53395962|53396251:+_chr19:53433059|53433750:+_chr19:53439828|53439933:+_chr19:53447196|53447283:+_chr19:53449512|53449638:+_chr19:53460915|53462812:+","UN_ZNF813_UP_LS0011","ZNF813","protein coding gene","no",1.11,0,0,0.003,27,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr19:53395193|53397943","intron_intersect_chr19:53432028|53441796"]
["chr19:53519649|53521856:+","chr19:53503819|53504096:+_chr19:53511963|53512148:+_chr19:53512601|53513047:+_chr19:53513198|53513330:+_chr19:53519524|53519649:+_chr19:53521856|53522084:+_chr19:53522617|53522684:+_chr19:53523264|53523515:+","ZNF331_LS001","ZNF331","protein coding gene","no",1.78,0.01,0,0.011,106,0.001,1,"0(0)","PRAD","yes","NA","NA","NA","exon_intersect_chr19:53520981|53522084"]
["chr19:53748390|53763596:+","chr19:53747289|53747555:+_chr19:53748268|53748390:+_chr19:53763596|53764199:+","UN_AC008753.1_UP_LS0003","AC008753.1","pseudogene","no",6.74,0,0,0.002,18,0,0,"0(0)","TGCT","no","NA","TE_intersect_:53763568|chr19|53763568|53763876|AluSp:Alu:SINE|101|-","NA","exon_intersect_chr19:53761961|53764199"]
["chr19:53892643|53893362:+","chr19:53882120|53882664:+_chr19:53883163|53883194:+_chr19:53884161|53884243:+_chr19:53889638|53889749:+_chr19:53889886|53890017:+_chr19:53891674|53891830:+_chr19:53892509|53892643:+_chr19:53893362|53893391:+_chr19:53897959|53898111:+_chr19:53898440|53898628:+_chr19:53900233|53900324:+_chr19:53900419|53900481:+_chr19:53900611|53900749:+_chr19:53903073|53903153:+_chr19:53904635|53906457:+_chr19:53906707|53906891:+_chr19:53906994|53907665:+","PRKCG_LS011","PRKCG","protein coding gene","no",2.62,0,0,0.021,197,0,0,"0(0)","ESCA;OV;STAD;TGCT;THYM;UCS","yes","NA","NA","intron_intersect_chr19:53892643|53892988","exon_intersect_chr19:53893362|53893391"]
["chr19:54305938|54355073:+","chr19:54305921|54305938:+_chr19:54355073|54355284:+","UN_AC245884.4_UP_LS0001","AC245884.4","pseudogene","no",3.43,0,0,0.003,28,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr19:54305741|54306026","exon_intersect_chr19:54351384|54355414"]
["chr19:54894217|54898113:+","chr19:54893748|54894217:+_chr19:54898113|54898230:+_chr19:54909245|54909523:+_chr19:54910018|54912218:+_chr19:54912690|54916178:+","UN_NCR1_UP_LS0001","NCR1","protein coding gene","no",2.13,0,0,0.003,29,0,0,"0(0)","TGCT","no","TE_intersect_:54894075|chr19|54894075|54894293|AluSx3:Alu:SINE|101|-","TE_intersect_:54897218|chr19|54897218|54900182|HERVH-int:ERV1:LTR|89|-","NA","NA"]
["chr19:55361112|55375911:+","chr19:55359290|55359326:+_chr19:55361013|55361112:+_chr19:55375911|55376032:+","UN_TMEM190_UP_LS0005","TMEM190","protein coding gene","no",2.93,0,0,0.005,50,0,0,"0(0)","THYM","no","NA","TE_intersect_:55375853|chr19|55375853|55376190|AluSx:Alu:SINE|98|-","intron_intersect_chr19:55361103|55361174","NA"]
["chr19:55430523|55430662:-","chr19:55428740|55430523:-_chr19:55430662|55433796:-_chr19:55437605|55437754:-_chr19:55438561|55438626:-_chr19:55440611|55440765:-_chr19:55442193|55442337:-","UN_SHISA7_LS0002","SHISA7","protein coding gene","no",7,0,0,0.006,53,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr19:55428740|55433796","exon_intersect_chr19:55428740|55433796"]
["chr19:5549162|5550736:+","chr19:5548692|5549162:+_chr19:5550736|5553174:+","UN_SAFB_UP_LS0005","SAFB","protein coding gene","yes",4.43,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:5549016|chr19|5549016|5551892|HERVH-int:ERV1:LTR|115|+","TE_intersect_:5549016|chr19|5549016|5551892|HERVH-int:ERV1:LTR|115|+","NA","NA"]
["chr19:55757988|55758544:+","chr19:55756637|55757988:+_chr19:55758544|55759175:+_chr19:55761792|55762086:+_chr19:55762598|55763175:+","UN_RFPL4A_UP_LS0010","RFPL4A","protein coding gene","no",3.47,0,0,0.006,59,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr19:56236102|56236453:-","chr19:56234813|56235087:-_chr19:56235123|56235157:-_chr19:56236033|56236102:-_chr19:56236453|56236487:-_chr19:56236838|56237158:-","UN_ZSCAN5A_LS0057","ZSCAN5A","protein coding gene","no",4.7,0,0,0.006,57,0,0,"0(0)","UCEC","no","TE_intersect_:56234919|chr19|56234919|56237271|MER51E:ERV1:LTR|194|+","TE_intersect_:56234919|chr19|56234919|56237271|MER51E:ERV1:LTR|194|+","intron_intersect_chr19:56228311|56240404","intron_intersect_chr19:56228311|56240404"]
["chr19:57493917|57507252:-","chr19:57493825|57493917:-_chr19:57507252|57507366:-","UN_ZNF772_UP_LS0006","ZNF772","protein coding gene","no",1.72,0,0,0.003,33,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr19:57506358|57508161","exon_intersect_chr19:57492856|57496097"]
["chr19:58393154|58394535:-","chr19:58392390|58393154:-_chr19:58394535|58394596:-","UN_RPS5_LS0054","RPS5","protein coding gene","no",13.14,0,0,0.006,62,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr19:58392976|58394806","exon_intersect_chr19:58392976|58394806"]
["chr19:6192807|6199476:-","chr19:6187901|6192807:-_chr19:6199476|6199563:-","UN_RFX2_LS0051","RFX2","protein coding gene","no",2.45,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:6199476|6199572","exon_intersect_chr19:6192668|6193094"]
["chr19:6594008|6603941:-","chr19:6585939|6586405:-_chr19:6590103|6590136:-_chr19:6590841|6591055:-_chr19:6592416|6592575:-_chr19:6593577|6594008:-_chr19:6603941|6604102:-","UN_CD70_LS0020","CD70","protein coding gene","no",2.1,0,0,0.007,65,0,0,"0(0)","DLBC;STAD","no","NA","NA","exon_intersect_chr19:6603941|6604103","exon_intersect_chr19:6593329|6594055"]
["chr19:682361|682386:-","chr19:681907|682361:-_chr19:682386|682536:-","UN_FSTL3_LS0043","FSTL3","protein coding gene","no",22.12,0,0,0.003,29,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr19:681333|683390","exon_intersect_chr19:681333|683390"]
["chr19:7506165|7506950:+","chr19:7505520|7505626:+_chr19:7505964|7506165:+_chr19:7506950|7507141:+_chr19:7519205|7521025:+","UN_TEX45_LS0009","TEX45","protein coding gene","no",3.15,0.02,0,0.018,169,0.001,1,"0(0)","BLCA;READ;THYM","no","NA","NA","exon_intersect_chr19:7505964|7506700","exon_intersect_chr19:7506795|7507141"]
["chr19:7924750|7924840:+","chr19:7924489|7924750:+_chr19:7924840|7925087:+_chr19:7925354|7925584:+","UN_CTXN1_LS0018","CTXN1","protein coding gene","no",3.21,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:7924485|7925558","exon_intersect_chr19:7924485|7925558"]
["chr19:8116799|8116885:-","chr19:8095379|8095503:-_chr19:8095964|8096080:-_chr19:8096444|8096569:-_chr19:8096881|8097006:-_chr19:8097289|8097414:-_chr19:8100901|8100972:-_chr19:8102724|8102873:-_chr19:8103562|8103687:-_chr19:8106108|8106233:-_chr19:8108170|8108238:-_chr19:8109227|8109388:-_chr19:8109631|8109753:-_chr19:8110845|8110967:-_chr19:8111058|8111183:-_chr19:8111648|8111770:-_chr19:8111977|8112099:-_chr19:8115515|8115640:-_chr19:8116674|8116799:-_chr19:8116885|8117291:-_chr19:8117464|8117589:-_chr19:8118897|8119022:-_chr19:8121258|8121386:-_chr19:8123464|8123589:-_chr19:8123784|8124008:-_chr19:8125892|8126017:-_chr19:8126297|8126347:-_chr19:8126468|8126605:-_chr19:8126713|8126832:-_chr19:8129028|8129153:-_chr19:8129240|8129365:-_chr19:8131235|8131288:-_chr19:8131554|8131829:-_chr19:8132984|8133106:-_chr19:8135961|8136086:-_chr19:8136190|8136309:-_chr19:8136388|8136531:-_chr19:8138141|8138323:-_chr19:8138412|8138564:-_chr19:8141717|8141842:-_chr19:8141940|8142137:-_chr19:8144877|8144972:-_chr19:8145843|8145938:-_chr19:8146127|8146225:-_chr19:8147104|8147186:-_chr19:8147314|8147497:-_chr19:8148747|8148869:-","UN_FBN3_LS0028","FBN3","protein coding gene","no",3.49,0,0,0.009,83,0,0,"0(0)","TGCT;UCS","no","NA","NA","intron_intersect_chr19:8116799|8117169","intron_intersect_chr19:8116799|8117169"]
["chr19:8876658|8882697:-","chr19:8863316|8863426:-_chr19:8865584|8865756:-_chr19:8865905|8865972:-_chr19:8866063|8866184:-_chr19:8866964|8867014:-_chr19:8868541|8868576:-_chr19:8871481|8871653:-_chr19:8876369|8876436:-_chr19:8876534|8876658:-_chr19:8882697|8882869:-_chr19:8883466|8883533:-_chr19:8883741|8883862:-_chr19:8884959|8885024:-_chr19:8894518|8894553:-_chr19:8894883|8895055:-_chr19:8895668|8895735:-_chr19:8895966|8896161:-","UN_MUC16_LS0025","MUC16","protein coding gene","no",17.38,0.52,0,0.021,203,0.007,5,"0(0)","OV","no","TE_intersect_:8882627|chr19|8882627|8882704|MamRTE1:RTE-BovB:LINE|211|+","NA","exon_intersect_chr19:8882697|8882869","intron_intersect_chr19:8876658|8882331"]
["chr19:8936314|8936741:+","chr19:8935439|8935639:+_chr19:8935976|8936314:+_chr19:8936741|8936884:+_chr19:8937018|8937210:+","UN_MUC16_LS0153","MUC16","protein coding gene","no",1.65,0,0,0.002,19,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr19:8934888|8939567","exon_intersect_chr19:8934888|8939567"]
["chr19:9229950|9230535:+","chr19:9229799|9229950:+_chr19:9230535|9230604:+_chr19:9251085|9252477:+","UN_OR7D1P_UP_LS0001","OR7D1P","pseudogene","no",6.53,0,0,0.007,64,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr19:9658289|9659379:-","chr19:9641116|9653881:-_chr19:9656547|9656653:-_chr19:9658009|9658135:-_chr19:9658225|9658289:-_chr19:9659379|9659467:-_chr19:9660720|9660874:-_chr19:9675015|9675044:-","UN_ZNF562_LS0039","ZNF562","protein coding gene","no",3.16,0,0,0.007,69,0.001,1,"0(0)","STAD","no","NA","NA","exon_intersect_chr19:9659379|9659467","intron_intersect_chr19:9658135|9659379"]
["chr2:101402752|101405081:-","chr2:101397404|101397724:-_chr2:101402436|101402752:-_chr2:101405081|101406057:-_chr2:101410619|101410713:-_chr2:101412915|101417684:-_chr2:101418851|101421777:-_chr2:101422362|101422472:-_chr2:101428956|101429019:-_chr2:101450594|101450680:-_chr2:101452385|101452446:-_chr2:101466777|101466900:-_chr2:101474636|101474701:-","UN_RFX8_LS0005","RFX8","protein coding gene","no",3.39,0,0,0.008,77,0,0,"0(0)","LAML;THYM","no","TE_intersect_:101404990|chr2|101404990|101405095|L2a:L2:LINE|267|+","NA","intron_intersect_chr2:101402752|101405943","intron_intersect_chr2:101402752|101405943"]
["chr2:102512507|102512760:-","chr2:102512284|102512507:-_chr2:102512760|102512905:-","UN_SLC9A4_LS0010","SLC9A4","protein coding gene","no",2.85,0,0,0.007,69,0,0,"0(0)","OV","no","NA","TE_intersect_:102512307|chr2|102512307|102512701|L3:CR1:LINE|342|+","intron_intersect_chr2:102512273|102514090","intron_intersect_chr2:102512273|102514090"]
["chr2:10431857|10432698:-","chr2:10431612|10431857:-_chr2:10432698|10432767:-","UN_AC007240.2_UP_LS0012","AC007240.2","no","no",4.5,0,0,0.008,81,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr2:104754661|104755593:-","chr2:104749384|104749489:-_chr2:104754326|104754440:-_chr2:104754560|104754661:-_chr2:104755593|104755755:-","UN_LINC01114_LS0007","LINC01114","lncRNA gene","no",2.96,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr2:104754326|104755755","exon_intersect_chr2:104754326|104755755"]
["chr2:105591341|105597043:-","chr2:105588310|105591341:-_chr2:105597043|105597226:-_chr2:105599648|105601257:-_chr2:105610328|105610642:-","UN_FHL2_UP_LS0019","FHL2","protein coding gene","yes",4.15,0,0,0.011,102,0,0,"0(0)","SKCM","no","NA","TE_intersect_:105591328|chr2|105591328|105591368|MIR1_Amn:MIR:SINE|225|+","NA","NA"]
["chr2:107636299|107650076:-","chr2:107633542|107636299:-_chr2:107650076|107650163:-_chr2:107650720|107650800:-_chr2:107746546|107746940:-","UN_LINC01885_UP_LS0005","LINC01885","lncRNA gene","no",3.8,0,0,0.017,159,0,0,"0(0)","ESCA;LIHC;LUSC;SKCM;STAD","no","TE_intersect_:107649946|chr2|107649946|107650185|LTR33A:ERVL:LTR|348|-","TE_intersect_:107635911|chr2|107635911|107636336|MLT2B2:ERVL:LTR|238|+","NA","NA"]
["chr2:107871827|107872092:+","chr2:107871511|107871827:+_chr2:107872092|107872928:+_chr2:107876267|107876380:+","UN_RGPD4_LS0002","RGPD4","protein coding gene","no",3.56,0,0,0.003,24,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr2:107870705|107872928","exon_intersect_chr2:107870705|107872928"]
["chr2:109964802|109984104:+","chr2:109963389|109963550:+_chr2:109964688|109964802:+_chr2:109984104|109984988:+","UN_AC013268.5_LS0006","AC013268.5","lncRNA gene","no",2.09,0,0,0.002,21,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr2:109964688|109965124","exon_intersect_chr2:109984058|109985124"]
["chr2:110349453|110350278:-","chr2:110339851|110342191:-_chr2:110349301|110349453:-_chr2:110350278|110353878:-","UN_MTLN_UP_LS0017","MTLN","protein coding gene","no",1.4,0,0,0.006,57,0,0,"0(0)","STAD","no","TE_intersect_:110350208|chr2|110350208|110350611|MLT1B:ERVL-MaLR:LTR|219|-","NA","NA","NA"]
["chr2:110374742|110376750:-","chr2:110360608|110374179:-_chr2:110374477|110374742:-_chr2:110376750|110377068:-_chr2:110377650|110377834:-_chr2:110384315|110384442:-","UN_AC140479.2_UP_LS0004","AC140479.2","pseudogene","no",1.22,0,0,0.005,44,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr2:110375138|110377068","NA"]
["chr2:11159696|11160466:+","chr2:11159480|11159696:+_chr2:11160466|11160548:+_chr2:11160625|11160694:+_chr2:11164204|11164261:+_chr2:11171925|11172045:+_chr2:11174968|11175009:+_chr2:11177737|11177957:+","UN_PQLC3_LS0005","PQLC3","protein coding gene","no",1.2,0,0,0.002,17,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr2:11155689|11160290","exon_intersect_chr2:11160290|11160548"]
["chr2:113031766|113054184:-","chr2:113027433|113028115:-_chr2:113028939|113029078:-_chr2:113031048|113031155:-_chr2:113031697|113031766:-_chr2:113054184|113054317:-","UN_HMGN2P23_UP_LS0007","HMGN2P23","pseudogene","no",2.4,0,0,0.005,45,0,0,"0(0)","ESCA","no","TE_intersect_:113054100|chr2|113054100|113054464|THE1B:ERVL-MaLR:LTR|124|-","NA","NA","intron_intersect_chr2:113031766|113052817"]
["chr2:11616062|11616631:+","chr2:11556618|11556771:+_chr2:11562463|11562582:+_chr2:11566480|11566656:+_chr2:11576353|11576535:+_chr2:11578297|11578431:+_chr2:11580704|11581808:+_chr2:11585161|11585274:+_chr2:11585762|11585905:+_chr2:11588746|11588931:+_chr2:11591396|11593126:+_chr2:11594376|11594517:+_chr2:11595251|11595379:+_chr2:11596111|11596239:+_chr2:11597781|11597978:+_chr2:11598680|11598860:+_chr2:11600800|11600995:+_chr2:11602406|11602542:+_chr2:11610688|11611027:+_chr2:11612495|11612610:+_chr2:11615091|11615290:+_chr2:11615964|11616062:+_chr2:11616631|11616720:+_chr2:11618288|11618919:+_chr2:11620905|11621007:+_chr2:11625154|11625312:+_chr2:11626966|11627104:+_chr2:11629948|11630109:+_chr2:11631909|11632113:+_chr2:11632889|11633063:+_chr2:11634131|11634349:+_chr2:11635270|11635405:+_chr2:11637716|11637916:+_chr2:11638671|11638809:+_chr2:11640291|11642786:+","UN_GREB1_LS0063","GREB1","protein coding gene","no",1.13,0,0,0.002,17,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr2:11615290|11616631","exon_intersect_chr2:11616631|11616720"]
["chr2:117055002|117055882:-","chr2:117052286|117053055:-_chr2:117054902|117055002:-_chr2:117055882|117060263:-","UN_AC062016.1_UP_LS0003","AC062016.1","pseudogene","no",2.85,0,0,0.005,48,0,0,"0(0)","OV","no","TE_intersect_:117055586|chr2|117055586|117056358|LTR1A2:ERV1:LTR|183|-","NA","NA","NA"]
["chr2:117760591|117804132:-","chr2:117754178|117757774:-_chr2:117760373|117760591:-_chr2:117804132|117804311:-","UN_AC009312.1_LS0005","AC009312.1","lncRNA gene","no",1.42,0,0,0.002,20,0,0,"0(0)","PCPG","no","TE_intersect_:117803780|chr2|117803780|117809809|L1PA3:L1:LINE|26|+","TE_intersect_:117760569|chr2|117760569|117760735|MER5B:hAT-Charlie:DNA|298|+","exon_intersect_chr2:117804132|117804174","intron_intersect_chr2:117760591|117785530"]
["chr2:118853699|118854013:-","chr2:118853204|118853699:-_chr2:118854013|118854182:-","UN_EN1_UP_LS0002","EN1","protein coding gene","no",4.24,0,0,0.013,120,0,0,"0(0)","BRCA;GBM;KICH;SARC","no","NA","NA","NA","NA"]
["chr2:120068074|120073178:+","chr2:120068010|120068074:+_chr2:120073178|120073220:+_chr2:120074100|120074178:+_chr2:120075476|120075520:+_chr2:120075701|120075753:+_chr2:120076971|120077091:+_chr2:120077229|120077316:+_chr2:120078493|120078581:+_chr2:120087171|120087240:+_chr2:120090347|120090516:+_chr2:120091555|120091661:+_chr2:120093249|120093276:+_chr2:120100244|120100286:+_chr2:120100699|120100814:+_chr2:120104060|120105115:+","UN_EPB41L5_LS0009","EPB41L5","protein coding gene","no",2.15,0,0,0.006,60,0,0,"0(0)","BRCA","no","TE_intersect_:120067978|chr2|120067978|120068614|L1PA7:L1:LINE|90|+","NA","intron_intersect_chr2:120042110|120073178","exon_intersect_chr2:120073178|120073220"]
["chr2:120451823|120452453:-","chr2:120448728|120449742:-_chr2:120450628|120451823:-_chr2:120452453|120452639:-","UN_TMEM185B_UP_LS0034","TMEM185B","protein coding gene","no",2.24,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr2:12104987|12105294:-","chr2:12103042|12104987:-_chr2:12105294|12105584:-_chr2:12109552|12109702:-","UN_MIR3681HG_LS0026","MIR3681HG","lncRNA gene","no",4.86,0,0,0.003,31,0,0,"0(0)","DLBC","no","TE_intersect_:12104936|chr2|12104936|12105360|MER45C:hAT-Tip100:DNA|241|-","TE_intersect_:12104936|chr2|12104936|12105360|MER45C:hAT-Tip100:DNA|241|-","intron_intersect_chr2:12083618|12106584","intron_intersect_chr2:12083618|12106584"]
["chr2:122237423|122238047:+","chr2:122229263|122236310:+_chr2:122237329|122237423:+_chr2:122238047|122238271:+_chr2:122241000|122246789:+","UN_AC062020.1_UP_LS0064","AC062020.1","lncRNA gene","no",2.52,0,0,0.007,64,0,0,"0(0)","SKCM","no","NA","NA","NA","NA"]
["chr2:123502296|123534768:-","chr2:123443266|123443480:-_chr2:123444392|123444440:-_chr2:123502193|123502296:-_chr2:123534768|123534849:-_chr2:123538869|123539012:-_chr2:123545281|123545388:-","UN_AC073409.1_UP_LS0005","AC073409.1","lncRNA gene","no",12.21,0,0,0.004,41,0,0,"0(0)","UVM","no","TE_intersect_:123534687|chr2|123534687|123535062|THE1C:ERVL-MaLR:LTR|127|-","NA","NA","NA"]
["chr2:12398370|12558206:+","chr2:12250955|12251054:+_chr2:12308688|12308784:+_chr2:12397522|12398370:+_chr2:12558206|12558444:+_chr2:12561100|12561265:+","UN_MIR3681HG_LS0098","MIR3681HG","lncRNA gene","no",5.55,0,0,0.009,85,0,0,"0(0)","SKCM;UVM","no","NA","NA","intron_intersect_chr2:12340301|12411398","exon_intersect_chr2:12558206|12558444"]
["chr2:126071285|126073339:+","chr2:126042529|126042651:+_chr2:126062494|126062609:+_chr2:126071196|126071285:+_chr2:126073339|126073455:+_chr2:126074146|126074228:+_chr2:126134219|126134328:+_chr2:126202703|126209263:+","UN_AC023347.1_UP_LS0013","AC023347.1","lncRNA gene","no",5.29,0,0,0.004,39,0,0,"0(0)","SKCM","no","TE_intersect_:126070819|chr2|126070819|126071339|MLT2A2:ERVL:LTR|189|+","TE_intersect_:126071486|chr2|126071486|126075349|HERVL-int:ERVL:LTR|115|+","NA","NA"]
["chr2:127136434|127137172:+","chr2:127116049|127116436:+_chr2:127133238|127133302:+_chr2:127135260|127136434:+_chr2:127137172|127139371:+","UN_NIFKP9_UP_LS0016","NIFKP9","pseudogene","no",2.87,0,0,0.005,47,0,0,"0(0)","STAD;TGCT","no","NA","NA","NA","NA"]
["chr2:128266150|128266290:+","chr2:128266002|128266150:+_chr2:128266290|128266464:+","UN_HS6ST1_LS0025","HS6ST1","protein coding gene","no",1.06,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr2:128265480|128268870","exon_intersect_chr2:128265480|128268870"]
["chr2:12898601|12915827:-","chr2:12896737|12897394:-_chr2:12898522|12898601:-_chr2:12915827|12915927:-_chr2:12926601|12927176:-","UN_RNU6-843P_UP_LS0047","RNU6-843P","small non-coding RNA gene","no",3.79,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","TE_intersect_:12898511|chr2|12898511|12898662|MIR3:MIR:SINE|347|+","NA","NA"]
["chr2:129872751|129873193:-","chr2:129868148|129869535:-_chr2:129872606|129872751:-_chr2:129873193|129873270:-_chr2:129877334|129877614:-","UN_LINC02572_LS0008","LINC02572","lncRNA gene","no",1.49,0,0,0.006,57,0,0,"0(0)","OV;TGCT","no","NA","NA","intron_intersect_chr2:129869535|129877334","intron_intersect_chr2:129869535|129877334"]
["chr2:130135545|130136359:+","chr2:130129558|130129798:+_chr2:130135145|130135545:+_chr2:130136359|130136515:+_chr2:130137638|130137871:+_chr2:130138076|130138163:+_chr2:130138611|130139322:+_chr2:130156524|130156638:+_chr2:130190469|130190695:+","UN_MED15P9_LS0005","MED15P9","pseudogene","no",3.54,0,0,0.002,18,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr2:130135545|130135978","exon_intersect_chr2:130136228|130136398"]
["chr2:130439478|130439962:-","chr2:130426548|130428243:-_chr2:130429937|130429981:-_chr2:130431193|130431363:-_chr2:130436158|130436381:-_chr2:130437987|130438184:-_chr2:130439285|130439478:-_chr2:130439962|130440171:-","UN_CYP4F62P_LS0006","CYP4F62P","pseudogene","no",4.21,0.02,0,0.004,40,0.003,2,"0(0)","THYM","no","NA","NA","intron_intersect_chr2:130439668|130439991","intron_intersect_chr2:130439478|130439570"]
["chr2:131190238|131190389:-","chr2:131166333|131167412:-_chr2:131188447|131188556:-_chr2:131189834|131189917:-_chr2:131190014|131190238:-_chr2:131190389|131190534:-_chr2:131190826|131190965:-_chr2:131191343|131191783:-_chr2:131193201|131193284:-_chr2:131194099|131194345:-_chr2:131195689|131195843:-_chr2:131197370|131197493:-_chr2:131197935|131198007:-_chr2:131201038|131201275:-_chr2:131202444|131202940:-_chr2:131209083|131209254:-","UN_PLEKHB2_LS0035","PLEKHB2","protein coding gene","no",8.14,0,0,0.014,133,0,0,"0(0)","ESCA;LUSC;THYM;UCS","no","NA","NA","intron_intersect_chr2:131189917|131190422","intron_intersect_chr2:131189917|131190422"]
["chr2:131270288|131286432:+","chr2:131265712|131268486:+_chr2:131269897|131270288:+_chr2:131286432|131286603:+_chr2:131287503|131287610:+_chr2:131287962|131288306:+_chr2:131288755|131288948:+_chr2:131290029|131290226:+_chr2:131296843|131297013:+_chr2:131298223|131300480:+_chr2:131301925|131302022:+_chr2:131302155|131302279:+_chr2:131302582|131302702:+_chr2:131303037|131303104:+_chr2:131308894|131311358:+","UN_PLEKHB2_LS0060","PLEKHB2","protein coding gene","no",0.95,0,0,0.005,44,0,0,"0(0)","THYM","no","TE_intersect_:131269967|chr2|131269967|131270465|L1PA13:L1:LINE|132|+","NA","intron_intersect_chr2:131265278|131279290","intron_intersect_chr2:131279387|131286818"]
["chr2:131834783|131835721:-","chr2:131833395|131834470:-_chr2:131834571|131834783:-_chr2:131835721|131835839:-_chr2:131861720|131861851:-","UN_AC103564.2_LS0001","AC103564.2","pseudogene","no",20.54,0,0,0.003,33,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr2:131835678|131835839","intron_intersect_chr2:131834773|131835678"]
["chr2:132670978|132674174:+","chr2:132606189|132606190:+_chr2:132645101|132645315:+_chr2:132645412|132646117:+_chr2:132670027|132670978:+_chr2:132674174|132674225:+_chr2:132674877|132675024:+","UN_AC016909.2_UP_LS0002","AC016909.2","lncRNA gene","no",1.01,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr2:132670205|132671179","intron_intersect_chr2:132673305|132725627"]
["chr2:134412700|134412869:+","chr2:134412492|134412700:+_chr2:134412869|134413015:+_chr2:134422803|134422919:+_chr2:134428365|134428439:+_chr2:134441758|134441915:+_chr2:134448649|134454620:+","UN_MGAT5_LS0098","MGAT5","protein coding gene","no",1.85,0,0,0.002,20,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr2:134403137|134412869","exon_intersect_chr2:134412869|134413015"]
["chr2:135822620|135829406:+","chr2:135820191|135820639:+_chr2:135821675|135822620:+_chr2:135829406|135829548:+","UN_LCT_LS0013","LCT","protein coding gene","no",21.67,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr2:135821675|135823087","intron_intersect_chr2:135824003|135829593"]
["chr2:138090250|138098615:+","chr2:138048607|138048713:+_chr2:138090142|138090250:+_chr2:138098615|138098735:+_chr2:138112509|138112592:+_chr2:138119796|138121392:+","UN_LINC01832_UP_LS0006","LINC01832","lncRNA gene","no",5.21,0,0,0.002,21,0,0,"0(0)","CHOL","no","TE_intersect_:138090084|chr2|138090084|138090392|L2a:L2:LINE|362|-","TE_intersect_:138098541|chr2|138098541|138098705|MER5B:hAT-Charlie:DNA|232|-","NA","NA"]
["chr2:143416697|143416920:-","chr2:143416170|143416697:-_chr2:143416920|143417118:-_chr2:143480730|143480774:-","UN_ARHGAP15_LS0020","ARHGAP15","protein coding gene","no",2.31,0,0,0.002,21,0,0,"0(0)","SARC","no","NA","NA","intron_intersect_chr2:143351396|143435264","intron_intersect_chr2:143351396|143435264"]
["chr2:143817741|143903518:-","chr2:143815922|143817741:-_chr2:143903518|143903704:-","UN_AC079584.2_UP_LS0007","AC079584.2","lncRNA gene","no",2.07,0,0,0.004,40,0,0,"0(0)","GBM","no","NA","TE_intersect_:143817622|chr2|143817622|143817803|L2a:L2:LINE|269|-","NA","intron_intersect_chr2:143805897|143819428"]
["chr2:145503934|145530596:-","chr2:145502878|145503934:-_chr2:145530596|145530772:-_chr2:145577779|145577902:-_chr2:145587988|145588140:-","UN_AC096666.1_UP_LS0008","AC096666.1","lncRNA gene","no",2.9,0,0,0.004,34,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr2:148255996|148257495:-","chr2:148253280|148255996:-_chr2:148257495|148257614:-_chr2:148259239|148259314:-_chr2:148259518|148259691:-","UN_MBD5_LS0031","MBD5","protein coding gene","no",7,0,0,0.009,88,0,0,"0(0)","LIHC","no","TE_intersect_:148253985|chr2|148253985|148259246|HERVL18-int:ERVL:LTR|156|-","TE_intersect_:148253985|chr2|148253985|148259246|HERVL18-int:ERVL:LTR|156|-","intron_intersect_chr2:148233395|148260574","intron_intersect_chr2:148233395|148260574"]
["chr2:150113625|150118107:+","chr2:150112717|150113317:+_chr2:150113446|150113625:+_chr2:150118107|150118528:+","UN_LINC01818_UP_LS0008","LINC01818","lncRNA gene","no",6.55,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:150113171|chr2|150113171|150116023|HERVH-int:ERV1:LTR|112|+","TE_intersect_:150117736|chr2|150117736|150118109|HERVH-int:ERV1:LTR|82|+","NA","NA"]
["chr2:151811402|151812357:-","chr2:151798802|151803324:-_chr2:151806821|151806972:-_chr2:151810378|151811402:-_chr2:151812357|151812440:-_chr2:151814169|151814316:-_chr2:151815139|151815199:-_chr2:151828131|151828465:-","UN_AC068547.1_LS0005","AC068547.1","protein coding gene","no",0.86,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr2:151812357|151812440","intron_intersect_chr2:151810561|151812357"]
["chr2:153403954|153732769:+","chr2:153403628|153403954:+_chr2:153732769|153732830:+_chr2:153900936|153901007:+_chr2:153944394|153944639:+_chr2:154140337|154140505:+_chr2:154242030|154242196:+_chr2:154242698|154242905:+_chr2:154245812|154245982:+_chr2:154259021|154259138:+_chr2:154301409|154301589:+_chr2:154395991|154396130:+_chr2:154408984|154409082:+_chr2:154438592|154438726:+_chr2:154450411|154450694:+","UN_GALNT13_UP_LS0009","GALNT13","protein coding gene","no",1.6,0,0,0.006,60,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr2:156163081|156188648:-","chr2:156160934|156163081:-_chr2:156188648|156188764:-_chr2:156205382|156205438:-_chr2:156227967|156228004:-_chr2:156254778|156254937:-","UN_LINC01876_LS0024","LINC01876","lncRNA gene","no",2.14,0,0,0.03,288,0,0,"0(0)","ESCA;LUSC;STAD;TGCT","no","TE_intersect_:156188486|chr2|156188486|156188781|AluJo:Alu:SINE|159|+","NA","NA","NA"]
["chr2:157491093|157515089:-","chr2:157414619|157416143:-_chr2:157418523|157418589:-_chr2:157427351|157427420:-_chr2:157430559|157430652:-_chr2:157430860|157430962:-_chr2:157434370|157434424:-_chr2:157434698|157434747:-_chr2:157443847|157444006:-_chr2:157487332|157487434:-_chr2:157487934|157488035:-_chr2:157490948|157491093:-_chr2:157515089|157515845:-","UN_CYTIP_UP_LS0001","CYTIP","protein coding gene","no",0.91,0,0,0.004,39,0,0,"0(0)","ESCA","no","TE_intersect_:157515055|chr2|157515055|157515141|L1M4:L1:LINE|234|-","NA","NA","NA"]
["chr2:159200480|159217497:+","chr2:159200467|159200480:+_chr2:159217497|159217630:+_chr2:159219238|159219361:+_chr2:159219692|159219867:+_chr2:159224232|159224364:+_chr2:159225688|159225779:+_chr2:159227819|159227965:+_chr2:159228796|159228896:+_chr2:159229578|159232655:+","UN_TANC1_LS0065","TANC1","protein coding gene","no",0.88,0,0,0.002,18,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr2:159199053|159217497","exon_intersect_chr2:159217497|159217630"]
["chr2:162246171|162248318:+","chr2:162246052|162246171:+_chr2:162248318|162248568:+_chr2:162249913|162250287:+_chr2:162259640|162259985:+","UN_GCA_UP_LS0007","GCA","protein coding gene","no",2.36,0,0,0.017,163,0,0,"0(0)","BLCA;CESC;ESCA;HNSC","no","TE_intersect_:162246144|chr2|162246144|162246516|L4_C_Mam:RTE-X:LINE|306|-","NA","NA","NA"]
["chr2:16466923|16469893:-","chr2:16447709|16466923:-_chr2:16469893|16469975:-_chr2:16478269|16478686:-","UN_AC010745.4_UP_LS0009","AC010745.4","lncRNA gene","no",8.72,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr2:164680657|164692221:-","chr2:164680242|164680657:-_chr2:164692221|164692397:-_chr2:164694269|164695836:-_chr2:164699405|164699499:-_chr2:164700522|164700756:-_chr2:164704444|164704518:-_chr2:164704952|164705105:-_chr2:164722075|164722311:-_chr2:164722425|164722491:-","UN_COBLL1_LS0007","COBLL1","protein coding gene","no",4.32,0.05,0,0.01,99,0.001,1,"0(0)","MESO","no","NA","TE_intersect_:164680643|chr2|164680643|164680823|MER53:hAT:DNA|133|+","exon_intersect_chr2:164692221|164692397","exon_intersect_chr2:164680186|164686032"]
["chr2:165810201|165821886:-","chr2:165794857|165795089:-_chr2:165810096|165810201:-_chr2:165821886|165822003:-_chr2:165832511|165833215:-_chr2:165836984|165837078:-_chr2:165845953|165846091:-","UN_AC009495.1_LS0004","AC009495.1","lncRNA gene","no",3.53,0,0,0.015,147,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:165821728|chr2|165821728|165822028|AluSz:Alu:SINE|143|+","TE_intersect_:165809922|chr2|165809922|165810233|AluSz:Alu:SINE|161|+","intron_intersect_chr2:165814354|165833048","intron_intersect_chr2:165810010|165814215"]
["chr2:167936146|167959772:+","chr2:167936037|167936146:+_chr2:167959772|167959897:+_chr2:167971033|167971157:+_chr2:167981828|167981859:+_chr2:167985243|167985399:+","UN_RN7SL813P_UP_LS0001","RN7SL813P","small non-coding RNA gene","no",8.27,0,0,0.005,44,0,0,"0(0)","OV","no","TE_intersect_:167935697|chr2|167935697|167936257|MLT2B4:ERVL:LTR|174|+","TE_intersect_:167959424|chr2|167959424|167959983|Charlie1a:hAT-Charlie:DNA|191|-","intron_intersect_chr2:167900782|167941109","intron_intersect_chr2:167955570|167964308"]
["chr2:169983770|169993926:-","chr2:169982414|169983770:-_chr2:169993926|169993979:-_chr2:169994991|169995052:-_chr2:169996135|169996332:-","UN_UBR3_LS0038","UBR3","protein coding gene","no",3.35,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:169993789|chr2|169993789|169994070|L1MC5a:L1:LINE|287|-","NA","intron_intersect_chr2:169986794|169994323","intron_intersect_chr2:169964538|169986645"]
["chr2:171271342|171287231:-","chr2:171240148|171245007:-_chr2:171271219|171271342:-_chr2:171287231|171287359:-","UN_TLK1_UP_LS0014","TLK1","protein coding gene","no",2.53,0,0,0.003,31,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr2:172570824|172581934:+","chr2:172556102|172556346:+_chr2:172558708|172558849:+_chr2:172562220|172562291:+_chr2:172564503|172564687:+_chr2:172564978|172565073:+_chr2:172566856|172566933:+_chr2:172568741|172568817:+_chr2:172570726|172570824:+_chr2:172581934|172581975:+","UN_PDK1_LS0010","PDK1","protein coding gene","no",1.97,0,0,0.007,70,0,0,"0(0)","STAD","no","NA","TE_intersect_:172581903|chr2|172581903|172582213|AluSz:Alu:SINE|161|-","intron_intersect_chr2:172570824|172586278","intron_intersect_chr2:172570824|172586278"]
["chr2:173761730|173800482:+","chr2:173532827|173533339:+_chr2:173761579|173761730:+_chr2:173800482|173800644:+","UN_AC106900.2_UP_LS0081","AC106900.2","lncRNA gene","no",1.49,0,0,0.005,44,0,0,"0(0)","OV","no","TE_intersect_:173761646|chr2|173761646|173761841|AluSc8:Alu:SINE|185|+","NA","NA","NA"]
["chr2:175181854|175233866:-","chr2:175178186|175178402:-_chr2:175179057|175179250:-_chr2:175180098|175180178:-_chr2:175181355|175181466:-_chr2:175181656|175181854:-_chr2:175233866|175234019:-_chr2:175238250|175238352:-","UN_RF00019_UP_LS1137","RF00019","small non-coding RNA gene","no",1.13,0,0,0.005,47,0,0,"0(0)","SKCM","no","NA","NA","NA","exon_intersect_chr2:175181355|175184607"]
["chr2:176246719|176257457:+","chr2:176246600|176246719:+_chr2:176257457|176257574:+_chr2:176296860|176296907:+_chr2:176297849|176297895:+_chr2:176323392|176323464:+_chr2:176326825|176326901:+_chr2:176328293|176328385:+_chr2:176328874|176328912:+_chr2:176329301|176329426:+_chr2:176330584|176330660:+_chr2:176337493|176337630:+","UN_MTX2_UP_LS0004","MTX2","protein coding gene","no",1.7,0,0,0.006,55,0,0,"0(0)","LGG","no","NA","TE_intersect_:176257423|chr2|176257423|176257598|AluJr:Alu:SINE|152|-","NA","NA"]
["chr2:177724941|177727578:+","chr2:177709215|177709361:+_chr2:177723089|177723203:+_chr2:177724720|177724941:+_chr2:177727578|177727694:+_chr2:177728062|177728752:+","UN_PDE11A_LS0042","PDE11A","protein coding gene","no",3.4,0,0,0.015,144,0,0,"0(0)","KICH;OV","no","NA","NA","intron_intersect_chr2:177723289|177727658","intron_intersect_chr2:177723289|177727658"]
["chr2:180689900|180691603:-","chr2:180689653|180689900:-_chr2:180691603|180691854:-","UN_AC009478.1_LS0014","AC009478.1","lncRNA gene","no",5.26,0,0,0.003,33,0,0,"0(0)","PRAD","no","TE_intersect_:180691204|chr2|180691204|180692425|LTR12C:ERV1:LTR|64|+","TE_intersect_:180689872|chr2|180689872|180690029|L4_B_Mam:RTE-X:LINE|316|-","intron_intersect_chr2:180617206|180692104","intron_intersect_chr2:180617206|180692104"]
["chr2:184332893|184334742:+","chr2:183997233|183997418:+_chr2:184190258|184190398:+_chr2:184226093|184226181:+_chr2:184303363|184303400:+_chr2:184332794|184332893:+_chr2:184334742|184334947:+","UN_MIR548AE1_UP_LS0018","MIR548AE1","small non-coding RNA gene","no",4.88,0,0,0.002,17,0,0,"0(0)","KICH","no","TE_intersect_:184332833|chr2|184332833|184333002|MIR3:MIR:SINE|315|+","NA","NA","NA"]
["chr2:187560873|187563689:-","chr2:187557997|187560873:-_chr2:187563689|187565760:-","UN_TFPI_LS0082","TFPI","protein coding gene","no",4.5,0,0,0.003,33,0,0,"0(0)","TGCT","no","TE_intersect_:187562814|chr2|187562814|187565376|HERVH-int:ERV1:LTR|100|-","TE_intersect_:187558388|chr2|187558388|187562682|HERVH-int:ERV1:LTR|89|-","intron_intersect_chr2:187554663|187565550","intron_intersect_chr2:187554663|187565550"]
["chr2:189006366|189008964:-","chr2:189006342|189006366:-_chr2:189008964|189009180:-_chr2:189011849|189011875:-","UN_COL3A1_LS0200","COL3A1","protein coding gene","no",4.02,0,0,0.003,24,0,0,"0(0)","MESO","no","NA","NA","exon_intersect_chr2:189008302|189009221","exon_intersect_chr2:189006345|189006452"]
["chr2:190626823|190648220:-","chr2:190623335|190626823:-_chr2:190648220|190648713:-","UN_AC006460.2_LS0007","AC006460.2","no","no",1.29,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr2:190646858|190648895","NA"]
["chr2:193170802|193171013:+","chr2:193170704|193170802:+_chr2:193171013|193173969:+","UN_AC092638.1_UP_LS0009","AC092638.1","pseudogene","no",1.88,0,0,0.011,106,0,0,"0(0)","STAD;TGCT","no","TE_intersect_:193170704|chr2|193170704|193171720|L1HS:L1:LINE|38|+","TE_intersect_:193170704|chr2|193170704|193171720|L1HS:L1:LINE|38|+","NA","NA"]
["chr2:194386858|194491553:-","chr2:194379465|194381432:-_chr2:194382145|194382194:-_chr2:194385667|194385786:-_chr2:194386721|194386858:-_chr2:194491553|194491680:-_chr2:194639110|194639248:-","UN_GLULP6_UP_LS0002","GLULP6","pseudogene","no",3.28,0,0,0.008,81,0,0,"0(0)","OV","no","NA","TE_intersect_:194385998|chr2|194385998|194386946|LTR1D:ERV1:LTR|183|+","NA","intron_intersect_chr2:194386506|194390839"]
["chr2:196830678|196837208:+","chr2:196830354|196830678:+_chr2:196837208|196837282:+","UN_HNRNPA3P15_UP_LS0004","HNRNPA3P15","pseudogene","no",4.67,0,0,0.003,33,0,0,"0(0)","OV","no","TE_intersect_:196830423|chr2|196830423|196831577|HERVP71A-int:ERV1:LTR|88|-","NA","NA","exon_intersect_chr2:196833004|196841372"]
["chr2:19965558|19966724:-","chr2:19948172|19948217:-_chr2:19951415|19951484:-_chr2:19953834|19953978:-_chr2:19960554|19960614:-_chr2:19965122|19965558:-_chr2:19966724|19966909:-_chr2:19969480|19969605:-_chr2:19973563|19973708:-_chr2:19974468|19974633:-_chr2:19975530|19975663:-_chr2:19978751|19978879:-_chr2:19980691|19980783:-_chr2:19982463|19982534:-_chr2:19989165|19989282:-_chr2:19989992|19990122:-","UN_WDR35_LS0019","WDR35","protein coding gene","no",2.08,0,0,0.01,93,0,0,"0(0)","ESCA;OV;STAD","no","NA","TE_intersect_:19965222|chr2|19965222|19966129|HAL1:L1:LINE|243|-","exon_intersect_chr2:19966724|19966909","intron_intersect_chr2:19962327|19966724"]
["chr2:200696011|200701414:+","chr2:200695917|200696011:+_chr2:200701414|200701506:+_chr2:200706334|200706464:+_chr2:200711359|200711538:+_chr2:200722978|200723100:+_chr2:200724100|200724187:+_chr2:200731031|200731105:+_chr2:200732487|200732539:+_chr2:200738660|200738811:+_chr2:200740758|200740851:+_chr2:200742322|200742431:+_chr2:200744224|200744408:+_chr2:200745722|200748040:+","UN_AOX3P_LS0020","AOX3P","pseudogene","no",5.33,0,0,0.009,85,0,0,"0(0)","LAML;THYM","no","NA","NA","intron_intersect_chr2:200696011|200699931","exon_intersect_chr2:200701410|200701448"]
["chr2:201563075|201563523:-","chr2:201562537|201563075:-_chr2:201563523|201563561:-","UN_C2CD6_LS0011","C2CD6","protein coding gene","no",1.8,0,0,0.003,29,0,0,"0(0)","ESCA","no","TE_intersect_:201562529|chr2|201562529|201563572|SVA_D:SVA:Retroposon|60|-","TE_intersect_:201562529|chr2|201562529|201563572|SVA_D:SVA:Retroposon|60|-","intron_intersect_chr2:201558265|201565729","intron_intersect_chr2:201558265|201565729"]
["chr2:202896219|202899531:-","chr2:202880601|202880937:-_chr2:202882711|202883741:-_chr2:202884198|202884303:-_chr2:202884395|202896219:-_chr2:202899531|202899637:-_chr2:202901025|202907959:-_chr2:202911436|202912226:-","UN_WDR12_LS0008","WDR12","protein coding gene","no",3.66,0,0,0.005,46,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr2:202899531|202899637","intron_intersect_chr2:202896219|202897300"]
["chr2:204173503|204195947:+","chr2:204150669|204151060:+_chr2:204154425|204154545:+_chr2:204173351|204173503:+_chr2:204195947|204198923:+","UN_DSTNP5_UP_LS0010","DSTNP5","pseudogene","no",4.06,0,0,0.003,27,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr2:206171707|206401186:-","chr2:206170966|206171707:-_chr2:206401186|206401230:-_chr2:206401280|206401691:-","UN_NDUFS1_UP_LS0001","NDUFS1","protein coding gene","no",1.94,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:206400005|chr2|206400005|206401705|SVA_F:SVA:Retroposon|83|-","TE_intersect_:206170980|chr2|206170980|206172592|SVA_D:SVA:Retroposon|43|-","NA","NA"]
["chr2:206692263|206693175:-","chr2:206689293|206692263:-_chr2:206693175|206693323:-_chr2:206694766|206694877:-_chr2:206699727|206699890:-_chr2:206700145|206700216:-_chr2:206704843|206705032:-_chr2:206707302|206707503:-_chr2:206707905|206708344:-","UN_DYTN_LS0009","DYTN","protein coding gene","no",3.53,0,0,0.008,76,0,0,"0(0)","LAML;PRAD","no","NA","TE_intersect_:206691992|chr2|206691992|206692282|AluJr:Alu:SINE|162|+","exon_intersect_chr2:206693175|206693323","intron_intersect_chr2:206687362|206693175"]
["chr2:207408842|207417601:-","chr2:207401010|207405968:-_chr2:207408808|207408842:-_chr2:207417601|207417746:-","UN_AC009226.1_LS0035","AC009226.1","lncRNA gene","no",0.51,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr2:207417601|207417744","intron_intersect_chr2:207332695|207417601"]
["chr2:208183417|208184029:+","chr2:208183077|208183417:+_chr2:208184029|208184361:+","UN_C2orf80_LS0007","C2orf80","protein coding gene","no",2.88,0,0,0.001,12,0,0,"0(0)","GBM","no","TE_intersect_:208183337|chr2|208183337|208183451|MIRc:MIR:SINE|316|+","NA","intron_intersect_chr2:208183047|208184951","intron_intersect_chr2:208183047|208184951"]
["chr2:208809565|208818301:+","chr2:208542595|208542991:+_chr2:208572013|208572167:+_chr2:208656826|208656989:+_chr2:208809452|208809565:+_chr2:208818301|208821422:+_chr2:208821967|208822063:+_chr2:208822491|208822555:+_chr2:208824195|208824350:+_chr2:208838251|208838411:+_chr2:208839986|208840094:+_chr2:208841681|208841783:+_chr2:208845134|208845226:+_chr2:208854300|208862787:+","UN_PTH2R_LS0118","PTH2R","protein coding gene","no",5.09,0,0,0.016,154,0,0,"0(0)","KIRC;KIRP","no","NA","NA","intron_intersect_chr2:208809565|208824195","intron_intersect_chr2:208809565|208824195"]
["chr2:212735143|212780699:+","chr2:212733117|212733199:+_chr2:212735061|212735143:+_chr2:212780699|212780963:+_chr2:212811106|212811173:+_chr2:212817391|212818060:+","UN_AC093865.1_LS0019","AC093865.1","lncRNA gene","no",3.41,0,0,0.004,35,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr2:215304539|215312083:-","chr2:215304340|215304539:-_chr2:215312083|215312101:-","UN_ABCA12_UP_LS0010","ABCA12","protein coding gene","no",1.49,0,0,0.008,78,0,0,"0(0)","OV","no","NA","TE_intersect_:215304291|chr2|215304291|215304565|AluJb:Alu:SINE|164|+","exon_intersect_chr2:215311817|215312624","NA"]
["chr2:215865889|215944062:-","chr2:215865803|215865889:-_chr2:215944062|215945087:-","UN_LINC00607_UP_LS0001","LINC00607","lncRNA gene","no",5.43,0.04,0,0.003,24,0.001,1,"0(0)","DLBC","no","TE_intersect_:215943970|chr2|215943970|215944277|AluSg:Alu:SINE|93|-","TE_intersect_:215865807|chr2|215865807|215866108|AluSx:Alu:SINE|126|-","intron_intersect_chr2:215943739|215944111","NA"]
["chr2:216660741|216661905:-","chr2:216660573|216660741:-_chr2:216661905|216661992:-","UN_IGFBP2_LS0042","IGFBP2","protein coding gene","no",22.55,0,0,0.008,78,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr2:216660557|216664436","exon_intersect_chr2:216660557|216664436"]
["chr2:217779300|218274226:-","chr2:217779278|217779300:-_chr2:218274226|218275621:-_chr2:218276026|218276079:-_chr2:218277004|218277099:-_chr2:218277366|218277453:-_chr2:218277633|218277670:-_chr2:218277935|218277974:-_chr2:218278515|218278565:-_chr2:218279038|218279091:-_chr2:218279289|218279353:-_chr2:218280026|218280126:-_chr2:218292466|218292503:-","UN_RPL7L1P9_UP_LS0001","RPL7L1P9","pseudogene","no",29.03,0,0,0.001,12,0,0,"0(0)","ESCA","no","NA","TE_intersect_:217779095|chr2|217779095|217780118|L1MDa:L1:LINE|178|+","exon_intersect_chr2:218274192|218275621","NA"]
["chr2:218927254|218961859:-","chr2:218899703|218901171:-_chr2:218906839|218907046:-_chr2:218927127|218927254:-_chr2:218961859|218961906:-","UN_RNU6-642P_UP_LS0001","RNU6-642P","small non-coding RNA gene","no",1.76,0,0,0.002,18,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr2:218961859|218961903","intron_intersect_chr2:218927254|218930358"]
["chr2:219482409|219505239:-","chr2:219481730|219482409:-_chr2:219505239|219505381:-_chr2:219515509|219515709:-_chr2:219516696|219516877:-","UN_AC053503.1_LS0002","AC053503.1","lncRNA gene","no",1.84,0,0,0.024,230,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr2:219504083|219506072","intron_intersect_chr2:219482409|219482784"]
["chr2:219532939|219533318:+","chr2:219532123|219532128:+_chr2:219532315|219532477:+_chr2:219532883|219532939:+_chr2:219533318|219533408:+_chr2:219535171|219535324:+_chr2:219537066|219537157:+_chr2:219537242|219537321:+_chr2:219537632|219537736:+_chr2:219537933|219539189:+_chr2:219539313|219539621:+","UN_ASIC4_LS0016","ASIC4","protein coding gene","no",2.27,0,0,0.002,18,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr2:219532001|219534058","exon_intersect_chr2:219532001|219534058"]
["chr2:219794170|219794417:+","chr2:219791619|219791812:+_chr2:219792377|219792462:+_chr2:219793346|219793417:+_chr2:219794071|219794170:+_chr2:219794417|219794528:+","UN_AC019211.1_UP_LS0016","AC019211.1","lncRNA gene","no",2.55,0,0,0.004,35,0,0,"0(0)","DLBC","no","NA","TE_intersect_:219794229|chr2|219794229|219794586|MLT1A0:ERVL-MaLR:LTR|202|+","NA","NA"]
["chr2:222301164|222303746:+","chr2:222301136|222301164:+_chr2:222303746|222305204:+","UN_CCDC140_LS0008","CCDC140","protein coding gene","no",1.37,0,0,0.002,23,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr2:222298996|222302978","exon_intersect_chr2:222303746|222305217"]
["chr2:222567580|222569027:-","chr2:222566869|222567580:-_chr2:222569027|222572022:-_chr2:222599928|222600083:-_chr2:222613811|222613928:-_chr2:222619645|222619737:-_chr2:222623650|222623730:-_chr2:222624272|222624479:-_chr2:222624714|222624775:-_chr2:222628837|222628888:-_chr2:222630113|222630174:-_chr2:222631604|222631674:-_chr2:222633199|222633307:-_chr2:222634391|222634541:-_chr2:222639580|222639691:-_chr2:222640862|222640931:-_chr2:222642851|222643005:-_chr2:222646801|222646996:-_chr2:222648740|222648795:-_chr2:222656016|222656113:-","UN_AC097461.1_LS0001","AC097461.1","lncRNA gene","no",1.81,0,0,0.005,49,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr2:222566899|222569719","exon_intersect_chr2:222566899|222569719"]
["chr2:224001922|224039081:-","chr2:223975153|223975904:-_chr2:223977544|223977627:-_chr2:223980311|223980397:-_chr2:223982681|223982781:-_chr2:223984752|223984950:-_chr2:223991803|223992000:-_chr2:223998115|223998342:-_chr2:224001642|224001922:-_chr2:224039081|224039288:-","UN_SERPINE2_LS0034","SERPINE2","protein coding gene","no",6.83,0.08,0,0.015,143,0.003,2,"0(0)","SKCM","no","NA","NA","intron_intersect_chr2:224038804|224039099","intron_intersect_chr2:224001922|224010343"]
["chr2:225885829|225891511:-","chr2:225680554|225681595:-_chr2:225704770|225704806:-_chr2:225739628|225739699:-_chr2:225885657|225885829:-_chr2:225891511|225891569:-","UN_DOCK10_UP_LS0014","DOCK10","protein coding gene","no",6.55,0,0,0.002,19,0,0,"0(0)","PCPG","no","NA","TE_intersect_:225885658|chr2|225885658|225885931|MLT1I:ERVL-MaLR:LTR|323|+","NA","NA"]
["chr2:228578721|228579894:+","chr2:228568249|228568399:+_chr2:228578035|228578095:+_chr2:228578604|228578721:+_chr2:228579894|228580169:+_chr2:228595214|228595893:+","UN_LINC01807_LS0028","LINC01807","lncRNA gene","no",2.98,0,0,0.014,138,0,0,"0(0)","ESCA;OV","no","TE_intersect_:228578578|chr2|228578578|228578878|AluSx:Alu:SINE|103|-","TE_intersect_:228579835|chr2|228579835|228579998|L2a:L2:LINE|281|-","intron_intersect_chr2:228506509|228611252","intron_intersect_chr2:228506509|228611252"]
["chr2:230462518|230463408:+","chr2:230416266|230416328:+_chr2:230417591|230417665:+_chr2:230442937|230443099:+_chr2:230444178|230444346:+_chr2:230446819|230446902:+_chr2:230449088|230449150:+_chr2:230449561|230449710:+_chr2:230450172|230450255:+_chr2:230461262|230461414:+_chr2:230462435|230462518:+_chr2:230463408|230464150:+_chr2:230466301|230466354:+_chr2:230467120|230467215:+_chr2:230469043|230469096:+_chr2:230470015|230470098:+_chr2:230473324|230473440:+_chr2:230474394|230474447:+_chr2:230494416|230494460:+_chr2:230498461|230498535:+_chr2:230503066|230503110:+_chr2:230504186|230504290:+_chr2:230506303|230506445:+_chr2:230507993|230508031:+_chr2:230511125|230511166:+_chr2:230515095|230515638:+","UN_SP100_LS0025","SP100","protein coding gene","yes",1.53,0,0,0.004,42,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr2:230462435|230462629","intron_intersect_chr2:230462629|230463618"]
["chr2:231708678|231712900:-","chr2:231708474|231708678:-_chr2:231712900|231713075:-","UN_PTMA_LS0034","PTMA","protein coding gene","yes",124.05,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr2:231712804|231713541","exon_intersect_chr2:231708509|231708751"]
["chr2:232606717|232609793:-","chr2:232594161|232595936:-_chr2:232606503|232606717:-_chr2:232609793|232609918:-","UN_EFHD1_LS0004","EFHD1","protein coding gene","no",1.91,0,0,0.002,16,0,0,"0(0)","KICH","no","NA","TE_intersect_:232606605|chr2|232606605|232606921|AluY:Alu:SINE|57|+","intron_intersect_chr2:232606717|232610732","intron_intersect_chr2:232606717|232610732"]
["chr2:233177359|233178172:-","chr2:233168269|233168874:-_chr2:233171096|233171234:-_chr2:233174014|233174120:-_chr2:233175462|233175585:-_chr2:233177281|233177359:-_chr2:233178172|233178260:-_chr2:233179958|233180145:-","UN_INPP5D_LS0036","INPP5D","protein coding gene","no",4.7,0,0,0.004,38,0,0,"0(0)","OV","no","TE_intersect_:233178150|chr2|233178150|233178278|FLAM_A:Alu:SINE|188|+","NA","intron_intersect_chr2:233177346|233182410","intron_intersect_chr2:233177346|233182410"]
["chr2:234219218|234279147:+","chr2:234218756|234219074:+_chr2:234219168|234219218:+_chr2:234279147|234279186:+_chr2:234281278|234283661:+","UN_AC097713.2_UP_LS0004","AC097713.2","pseudogene","no",2.07,0,0,0.007,64,0,0,"0(0)","KIRC","no","TE_intersect_:234219144|chr2|234219144|234219251|MIRb:MIR:SINE|271|-","NA","NA","NA"]
["chr2:234949123|234949586:+","chr2:234932594|234932878:+_chr2:234945333|234945519:+_chr2:234945643|234945702:+_chr2:234948864|234949123:+_chr2:234949586|234949785:+_chr2:234949867|234950935:+_chr2:234951223|234951351:+_chr2:234951439|234951924:+","UN_SH3BP4_UP_LS0010","SH3BP4","protein coding gene","no",11.38,0,0,0.007,64,0,0,"0(0)","OV","no","TE_intersect_:234949013|chr2|234949013|234949218|MIRb:MIR:SINE|363|-","NA","NA","NA"]
["chr2:236167669|236220907:+","chr2:236167423|236167669:+_chr2:236220907|236221684:+","UN_AC019068.1_LS0004","AC019068.1","lncRNA gene","no",1.05,0,0,0.021,199,0,0,"0(0)","ESCA;GBM;HNSC","no","NA","NA","exon_intersect_chr2:236167449|236168369","intron_intersect_chr2:236214866|236237689"]
["chr2:236774629|236777397:+","chr2:236774363|236774629:+_chr2:236777397|236777885:+_chr2:236780286|236781407:+","UN_COPS8_UP_LS0009","COPS8","protein coding gene","no",2.65,0,0,0.007,64,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr2:237429709|237433061:-","chr2:237427501|237429709:-_chr2:237433061|237433156:-_chr2:237434657|237434822:-","UN_AC112721.2_LS0001","AC112721.2","lncRNA gene","no",4.14,0,0,0.004,40,0,0,"0(0)","THYM;UCS","no","TE_intersect_:237433039|chr2|237433039|237433227|OldhAT1:hAT-Ac:DNA|371|+","NA","exon_intersect_chr2:237433061|237433156","intron_intersect_chr2:237429198|237433061"]
["chr2:239426109|239435617:+","chr2:239425873|239426109:+_chr2:239435617|239435687:+_chr2:239437967|239438034:+_chr2:239438540|239438696:+_chr2:239439281|239441157:+","UN_AC079612.1_UP_LS0003","AC079612.1","lncRNA gene","no",2.61,0,0,0.007,68,0,0,"0(0)","GBM;LGG","no","NA","NA","NA","NA"]
["chr2:240467209|240467251:+","chr2:240465527|240465648:+_chr2:240466058|240467209:+_chr2:240467251|240468078:+","UN_GPC1_LS0142","GPC1","protein coding gene","no",45.06,0,0,0.002,15,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr2:240466058|240468078","exon_intersect_chr2:240466058|240468078"]
["chr2:240959418|240960449:-","chr2:240954627|240955867:-_chr2:240956370|240959122:-_chr2:240959240|240959418:-_chr2:240960449|240960676:-","UN_CROCC2_LS0038","CROCC2","protein coding gene","no",2.08,0,0,0.001,14,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr2:240959800|240963264","exon_intersect_chr2:240959240|240959800"]
["chr2:241746621|241748399:+","chr2:241734630|241734695:+_chr2:241735133|241735516:+_chr2:241741033|241741090:+_chr2:241742435|241742574:+_chr2:241743622|241743815:+_chr2:241744709|241746621:+_chr2:241748399|241750277:+","UN_D2HGDH_LS0030","D2HGDH","protein coding gene","no",3.57,0,0,0.005,50,0,0,"0(0)","ESCA;LAML;OV","no","TE_intersect_:241746607|chr2|241746607|241746904|AluSg:Alu:SINE|114|+","TE_intersect_:241748119|chr2|241748119|241748420|AluSx1:Alu:SINE|86|-","intron_intersect_chr2:241744877|241748827","intron_intersect_chr2:241744877|241748827"]
["chr2:24260355|24261106:-","chr2:24202867|24203783:-_chr2:24204245|24204418:-_chr2:24205214|24205297:-_chr2:24208237|24208319:-_chr2:24209100|24209221:-_chr2:24209818|24210033:-_chr2:24210780|24210947:-_chr2:24212650|24212748:-_chr2:24216049|24216232:-_chr2:24217907|24218013:-_chr2:24220945|24221066:-_chr2:24246129|24246320:-_chr2:24246797|24246893:-_chr2:24248629|24248750:-_chr2:24248837|24248882:-_chr2:24252345|24252511:-_chr2:24254367|24254431:-_chr2:24257888|24260355:-_chr2:24261106|24261250:-_chr2:24261561|24262209:-","UN_ITSN2_LS0021","ITSN2","protein coding gene","no",10.28,0,0,0.006,53,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr2:24261106|24261250","intron_intersect_chr2:24258093|24261106"]
["chr2:25768886|25771440:-","chr2:25768762|25768886:-_chr2:25771440|25771540:-_chr2:25799385|25799535:-_chr2:25806229|25806337:-_chr2:25835538|25835543:-","UN_ASXL2_LS0011","ASXL2","protein coding gene","no",4.44,0,0,0.004,37,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr2:25771440|25771540","intron_intersect_chr2:25768868|25771440"]
["chr2:26463571|26463651:-","chr2:26457203|26458220:-_chr2:26460647|26460747:-_chr2:26460852|26461030:-_chr2:26461696|26461937:-_chr2:26462083|26462181:-_chr2:26463483|26463571:-_chr2:26463651|26463737:-_chr2:26463964|26464106:-_chr2:26464869|26465029:-_chr2:26465672|26465842:-_chr2:26465949|26466076:-_chr2:26466714|26466851:-_chr2:26467099|26467233:-_chr2:26467365|26467501:-_chr2:26468408|26468474:-_chr2:26470593|26470721:-_chr2:26471121|26471150:-_chr2:26472519|26472589:-_chr2:26473132|26473294:-_chr2:26473406|26473541:-","UN_OTOF_LS0002","OTOF","protein coding gene","no",1.21,0,0,0.008,79,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr2:26463571|26463964","intron_intersect_chr2:26463571|26463964"]
["chr2:27101888|27102015:-","chr2:27101113|27101888:-_chr2:27102015|27102221:-_chr2:27102360|27102430:-_chr2:27102526|27102591:-_chr2:27104287|27104359:-","UN_CGREF1_LS0026","CGREF1","protein coding gene","no",6.02,0,0,0.006,60,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr2:27102015|27102591","intron_intersect_chr2:27101888|27102015"]
["chr2:27540028|27540283:-","chr2:27539983|27540028:-_chr2:27540283|27541143:-","UN_C2orf16_LS0010","C2orf16","protein coding gene","no",0.64,0,0,0.002,15,0,0,"0(0)","ESCA","no","TE_intersect_:27539127|chr2|27539127|27541442|SVA_E:SVA:Retroposon|79|-","TE_intersect_:27539127|chr2|27539127|27541442|SVA_E:SVA:Retroposon|79|-","intron_intersect_chr2:27537570|27556908","intron_intersect_chr2:27537570|27556908"]
["chr2:28152553|28237202:+","chr2:28152473|28152553:+_chr2:28237202|28237301:+_chr2:28241323|28241393:+_chr2:28244780|28244862:+_chr2:28298338|28298491:+_chr2:28338450|28338901:+","UN_BABAM2_LS0053","BABAM2","protein coding gene","no",4.19,0,0,0.003,28,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr2:28134585|28233143","exon_intersect_chr2:28237202|28237301"]
["chr2:29951704|29955249:-","chr2:29951522|29951704:-_chr2:29955249|29955405:-_chr2:29958821|29959035:-","UN_ALK_UP_LS0002","ALK","protein coding gene","yes",12.98,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr2:30809526|30859573:-","chr2:30809444|30809526:-_chr2:30859573|30859833:-_chr2:30859912|30862061:-_chr2:30867256|30867540:-","UN_AC092569.1_UP_LS0004","AC092569.1","pseudogene","no",2.01,0,0,0.004,39,0,0,"0(0)","KIRC","no","NA","NA","NA","intron_intersect_chr2:30807547|30820472"]
["chr2:32869191|32869319:+","chr2:32868131|32869095:+_chr2:32869145|32869191:+_chr2:32869319|32869502:+_chr2:32869859|32870126:+","UN_LINC00486_LS0039","LINC00486","lncRNA gene","no",1.47,0,0,0.001,12,0,0,"0(0)","ESCA","no","TE_intersect_:32869011|chr2|32869011|32869567|SVA_F:SVA:Retroposon|94|+","TE_intersect_:32869011|chr2|32869011|32869567|SVA_F:SVA:Retroposon|94|+","intron_intersect_chr2:32841233|32882699","intron_intersect_chr2:32841233|32882699"]
["chr2:33562614|33562729:+","chr2:33527181|33527412:+_chr2:33534323|33534400:+_chr2:33539097|33539323:+_chr2:33543512|33543627:+_chr2:33549604|33549751:+_chr2:33555531|33555567:+_chr2:33558211|33558336:+_chr2:33558672|33559030:+_chr2:33562456|33562614:+_chr2:33562729|33564605:+","UN_RASGRP3_LS0041","RASGRP3","protein coding gene","no",2.74,0,0,0.003,29,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr2:33559030|33562729","exon_intersect_chr2:33562729|33564750"]
["chr2:33856431|33886372:+","chr2:33706874|33706953:+_chr2:33855688|33855753:+_chr2:33856374|33856431:+_chr2:33886372|33886474:+_chr2:33926840|33926968:+_chr2:33944428|33944553:+_chr2:33960182|33963824:+","UN_LINC01320_LS0031","LINC01320","lncRNA gene","no",1.78,0,0,0.008,80,0,0,"0(0)","SKCM","no","TE_intersect_:33856130|chr2|33856130|33856515|THE1B:ERVL-MaLR:LTR|107|+","NA","intron_intersect_chr2:33855753|33886372","exon_intersect_chr2:33886372|33886474"]
["chr2:34203095|34203220:+","chr2:33706886|33706953:+_chr2:33855688|33855753:+_chr2:33856374|33856431:+_chr2:33859823|33859876:+_chr2:33863272|33863449:+_chr2:33873797|33873919:+_chr2:33886372|33886474:+_chr2:33926840|33926968:+_chr2:33944428|33944553:+_chr2:34061019|34061203:+_chr2:34202984|34203095:+_chr2:34203220|34203361:+_chr2:34286643|34286746:+_chr2:34384517|34384569:+_chr2:34432547|34433471:+","UN_AC008170.1_LS0001","AC008170.1","lncRNA gene","no",2.49,0,0,0.016,153,0,0,"0(0)","DLBC;SKCM","no","NA","TE_intersect_:34203099|chr2|34203099|34203574|LTR33A_:ERVL:LTR|290|+","intron_intersect_chr2:34069550|34286643","intron_intersect_chr2:34069550|34286643"]
["chr2:34562782|34564448:-","chr2:34561981|34562782:-_chr2:34564448|34564479:-","UN_LINC01320_LS0107","LINC01320","lncRNA gene","no",1.96,0,0,0.007,65,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr2:34403757|34635249","intron_intersect_chr2:34403757|34635249"]
["chr2:3611159|3613311:+","chr2:3610258|3610900:+_chr2:3611035|3611159:+_chr2:3613311|3613382:+_chr2:3637533|3637604:+_chr2:3640278|3640331:+_chr2:3643444|3643539:+_chr2:3643727|3644446:+","UN_COLEC11_LS0018","COLEC11","protein coding gene","no",5.6,0,0,0.003,29,0,0,"0(0)","DLBC","no","TE_intersect_:3610820|chr2|3610820|3611186|HAL1ME:L1:LINE|297|-","TE_intersect_:3613229|chr2|3613229|3613340|OldhAT1:hAT-Ac:DNA|330|-","intron_intersect_chr2:3606243|3613311","exon_intersect_chr2:3613311|3613382"]
["chr2:37978281|37992531:-","chr2:37976292|37978281:-_chr2:37992531|37992769:-","UN_RMDN2_LS0024","RMDN2","protein coding gene","no",3.38,0,0,0.015,139,0,0,"0(0)","KICH;LUAD;PAAD;STAD","no","NA","TE_intersect_:37976843|chr2|37976843|37978351|SVA_B:SVA:Retroposon|46|-","intron_intersect_chr2:37991297|37997416","intron_intersect_chr2:37976365|37981283"]
["chr2:38482491|38482624:-","chr2:38481796|38481973:-_chr2:38482082|38482088:-_chr2:38482183|38482491:-_chr2:38482624|38482876:-","UN_RPLP0P6_LS0089","RPLP0P6","pseudogene","no",0.9,0,0,0.004,43,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr2:38481851|38482804","exon_intersect_chr2:38481851|38482804"]
["chr2:39920546|39922849:+","chr2:39920430|39920546:+_chr2:39922849|39922889:+_chr2:40043418|40043542:+_chr2:40104909|40104962:+_chr2:40251684|40251774:+_chr2:40254420|40255058:+","UN_SLC8A1-AS1_LS0010","SLC8A1-AS1","lncRNA gene","no",0.28,0,0,0.002,17,0,0,"0(0)","THYM","no","TE_intersect_:39919156|chr2|39919156|39921143|L1MA4A:L1:LINE|186|-","NA","intron_intersect_chr2:39919783|39922849","exon_intersect_chr2:39922849|39923018"]
["chr2:41378404|41378536:+","chr2:41378122|41378404:+_chr2:41378536|41380486:+_chr2:41391068|41393783:+","UN_LDHAP3_UP_LS0010","LDHAP3","pseudogene","no",5.62,0,0,0.004,37,0,0,"0(0)","OV","no","TE_intersect_:41378263|chr2|41378263|41384502|HERVH-int:ERV1:LTR|198|+","TE_intersect_:41378263|chr2|41378263|41384502|HERVH-int:ERV1:LTR|198|+","NA","NA"]
["chr2:41537794|41568545:-","chr2:41510734|41510993:-_chr2:41537726|41537794:-_chr2:41568545|41568619:-_chr2:41707835|41708178:-","UN_SLC8A1_UP_LS0068","SLC8A1","protein coding gene","no",1.98,0,0,0.006,53,0,0,"0(0)","KIRP","no","NA","NA","NA","NA"]
["chr2:41995597|41996517:+","chr2:41954828|41955372:+_chr2:41995079|41995597:+_chr2:41996517|41997116:+","UN_PKDCC_UP_LS0024","PKDCC","protein coding gene","no",3.64,0,0,0.01,92,0,0,"0(0)","PCPG","no","TE_intersect_:41995003|chr2|41995003|41996193|SVA_D:SVA:Retroposon|28|+","NA","NA","NA"]
["chr2:42978631|42978672:-","chr2:42969436|42978631:-_chr2:42978672|42992823:-","UN_AC098824.1_UP_LS0032","AC098824.1","pseudogene","no",18.49,0,0,0.003,27,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr2:43225623|43225726:+","chr2:43224333|43224643:+_chr2:43224836|43224868:+_chr2:43225355|43225623:+_chr2:43225726|43226230:+","UN_ZFP36L2_LS0231","ZFP36L2","protein coding gene","yes",2.02,0,0,0.005,51,0,0,"0(0)","LAML;OV","no","NA","NA","exon_intersect_chr2:43222402|43225752","exon_intersect_chr2:43222402|43225752"]
["chr2:44064503|44067571:-","chr2:44058957|44064503:-_chr2:44067571|44068698:-","UN_LRPPRC_UP_LS0008","LRPPRC","protein coding gene","no",4.47,0,0,0.002,21,0,0,"0(0)","LIHC","no","TE_intersect_:44066368|chr2|44066368|44068379|SVA_D:SVA:Retroposon|79|-","TE_intersect_:44064201|chr2|44064201|44064504|AluSp:Alu:SINE|102|-","NA","NA"]
["chr2:455485|456329:-","chr2:454504|455485:-_chr2:456329|456385:-","UN_AC079779.3_UP_LS0004","AC079779.3","lncRNA gene","no",1.55,0,0,0.007,64,0,0,"0(0)","PRAD","no","NA","NA","NA","NA"]
["chr2:45842315|45843000:+","chr2:45842231|45842315:+_chr2:45843000|45843063:+_chr2:45845395|45845753:+","UN_PRKCE_LS0016","PRKCE","protein coding gene","yes",2.31,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr2:45840551|45843000","exon_intersect_chr2:45843000|45843063"]
["chr2:47046510|47046817:-","chr2:47035279|47035625:-_chr2:47040368|47041725:-_chr2:47043045|47043226:-_chr2:47043649|47043697:-_chr2:47043849|47045584:-_chr2:47046014|47046510:-_chr2:47046817|47046919:-_chr2:47108388|47108785:-","UN_STPG4_LS0005","STPG4","protein coding gene","no",2.66,0,0,0.005,49,0,0,"0(0)","STAD","no","TE_intersect_:47046671|chr2|47046671|47046884|MIRc:MIR:SINE|292|-","NA","exon_intersect_chr2:47046817|47046919","intron_intersect_chr2:47046431|47046817"]
["chr2:48253656|48262896:+","chr2:48253450|48253656:+_chr2:48262896|48262978:+_chr2:48266263|48275102:+","UN_FOXN2_UP_LS0001","FOXN2","protein coding gene","no",2.61,0,0,0.002,21,0,0,"0(0)","LAML","no","TE_intersect_:48252292|chr2|48252292|48254630|L2a:L2:LINE|279|-","TE_intersect_:48262807|chr2|48262807|48262925|HAL1:L1:LINE|233|-","NA","NA"]
["chr2:52950999|52951101:-","chr2:52949084|52950999:-_chr2:52951101|52951242:-","UN_AC010967.1_UP_LS0009","AC010967.1","lncRNA gene","no",2.17,0,0,0.003,25,0,0,"0(0)","SKCM","no","TE_intersect_:52951017|chr2|52951017|52951403|THE1C:ERVL-MaLR:LTR|133|-","TE_intersect_:52949350|chr2|52949350|52951015|THE1C-int:ERVL-MaLR:LTR|138|-","NA","NA"]
["chr2:54788278|54793289:+","chr2:54788000|54788278:+_chr2:54793289|54793365:+_chr2:54813232|54813391:+_chr2:54816787|54816885:+_chr2:54820394|54820462:+_chr2:54827566|54827751:+_chr2:54829342|54829477:+_chr2:54844047|54844248:+_chr2:54847486|54847623:+_chr2:54849962|54850218:+_chr2:54853643|54853855:+_chr2:54859534|54859701:+_chr2:54863783|54863889:+_chr2:54866766|54866884:+_chr2:54869181|54869367:+_chr2:54871500|54871605:+_chr2:54879547|54879640:+_chr2:54891054|54891154:+_chr2:54892454|54892656:+_chr2:54894915|54895026:+_chr2:54895273|54895400:+_chr2:54899641|54899782:+_chr2:54903044|54903196:+_chr2:54903371|54903502:+_chr2:54910954|54911042:+_chr2:54916759|54916935:+_chr2:54928313|54928514:+_chr2:54928625|54928751:+_chr2:54948882|54948960:+_chr2:54950650|54950779:+_chr2:54952594|54952692:+_chr2:54953983|54954156:+_chr2:54957790|54957998:+_chr2:54959104|54959261:+_chr2:54960220|54960334:+_chr2:54962523|54962711:+_chr2:54963986|54964158:+_chr2:54964571|54964733:+_chr2:54966723|54967103:+_chr2:54968128|54968235:+","UN_EML6_LS0010","EML6","protein coding gene","no",2.17,0,0,0.001,11,0,0,"0(0)","DLBC","no","TE_intersect_:54787817|chr2|54787817|54788368|MER73:ERVL:LTR|195|+","NA","intron_intersect_chr2:54748404|54813232","intron_intersect_chr2:54748404|54813232"]
["chr2:55772912|55800636:+","chr2:55705419|55705535:+_chr2:55759196|55759339:+_chr2:55768264|55768388:+_chr2:55772854|55772912:+_chr2:55800636|55800733:+_chr2:55807102|55807815:+","UN_AC011306.1_UP_LS0017","AC011306.1","lncRNA gene","no",2.4,0,0,0.007,64,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr2:57298489|57380053:-","chr2:57293894|57298489:-_chr2:57380053|57380130:-_chr2:57551663|57551753:-","AC132153.1_LS003","AC132153.1","lncRNA gene","no",2.16,0,0,0.005,48,0,0,"0(0)","LGG","yes","NA","NA","NA","NA"]
["chr2:58367434|58379301:-","chr2:58366283|58367434:-_chr2:58379301|58379360:-_chr2:58387470|58387556:-","UN_FANCL_UP_LS0007","FANCL","protein coding gene","no",2.51,0,0,0.011,108,0,0,"0(0)","ESCA;LUSC","no","TE_intersect_:58379141|chr2|58379141|58379359|MER44D:TcMar-Tigger:DNA|226|+","TE_intersect_:58367409|chr2|58367409|58368861|L1MB8:L1:LINE|223|+","NA","NA"]
["chr2:5982857|5992886:+","chr2:5932789|5932921:+_chr2:5968586|5969238:+_chr2:5969330|5973429:+_chr2:5980420|5982072:+_chr2:5982298|5982857:+_chr2:5992886|5992968:+_chr2:5994162|5994205:+_chr2:6000983|6003542:+","UN_LINC01105_LS0018","LINC01105","lncRNA gene","no",4.63,0,0,0.006,54,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr2:5982274|5984897","intron_intersect_chr2:5985718|6000983"]
["chr2:60420152|60424292:+","chr2:60417579|60417981:+_chr2:60420068|60420152:+_chr2:60424292|60424659:+","UN_MIR4432HG_LS0036","MIR4432HG","lncRNA gene","no",33.79,0,0,0.01,93,0,0,"0(0)","TGCT","no","TE_intersect_:60417835|chr2|60417835|60421005|HERVH-int:ERV1:LTR|105|+","TE_intersect_:60424108|chr2|60424108|60424655|MLT1F2:ERVL-MaLR:LTR|216|+","NA","NA"]
["chr2:62100340|62101749:-","chr2:62088743|62090801:-_chr2:62100188|62100340:-_chr2:62101749|62102026:-","UN_COMMD1_LS0045","COMMD1","protein coding gene","no",1.88,0,0,0.005,45,0,0,"0(0)","TGCT","no","TE_intersect_:62101748|chr2|62101748|62102165|MER21B:ERVL:LTR|221|-","TE_intersect_:62100328|chr2|62100328|62101128|MER4E1:ERV1:LTR|69|-","intron_intersect_chr2:62100340|62118232","intron_intersect_chr2:62100340|62118232"]
["chr2:64078546|64079140:-","chr2:64029786|64042446:-_chr2:64078359|64078546:-_chr2:64079140|64095268:-_chr2:64096125|64096313:-_chr2:64096413|64096610:-_chr2:64100398|64100499:-_chr2:64104701|64104830:-_chr2:64108240|64108379:-_chr2:64144081|64144429:-","UN_VPS54_UP_LS0014","VPS54","protein coding gene","no",1.35,0,0,0.003,30,0,0,"0(0)","TGCT","no","TE_intersect_:64077509|chr2|64077509|64079862|HERVH-int:ERV1:LTR|80|-","TE_intersect_:64077509|chr2|64077509|64079862|HERVH-int:ERV1:LTR|80|-","NA","NA"]
["chr2:64511508|64511689:-","chr2:64510467|64511508:-_chr2:64511689|64512115:-","UN_LGALSL-DT_UP_LS0019","LGALSL-DT","no","no",1.07,0,0,0.002,19,0,0,"0(0)","ESCA","no","TE_intersect_:64510942|chr2|64510942|64513198|SVA_F:SVA:Retroposon|73|-","TE_intersect_:64510942|chr2|64510942|64513198|SVA_F:SVA:Retroposon|73|-","NA","NA"]
["chr2:65562448|65609777:+","chr2:65558926|65559084:+_chr2:65562378|65562448:+_chr2:65609777|65609902:+_chr2:65628163|65628438:+","UN_AC007389.1_LS0028","AC007389.1","lncRNA gene","no",5.98,0,0,0.005,45,0,0,"0(0)","TGCT","no","TE_intersect_:65562285|chr2|65562285|65562669|MSTA:ERVL-MaLR:LTR|97|-","TE_intersect_:65609744|chr2|65609744|65609923|AluJb:Alu:SINE|168|-","intron_intersect_chr2:65555534|65589566","intron_intersect_chr2:65602362|65623272"]
["chr2:65664001|65691782:+","chr2:65634528|65634659:+_chr2:65663946|65664001:+_chr2:65691782|65692179:+","UN_AC007389.1_LS0047","AC007389.1","lncRNA gene","no",2.75,0,0,0.005,49,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr2:65640177|65666695","exon_intersect_chr2:65691782|65692185"]
["chr2:66391244|66391390:-","chr2:66364343|66364469:-_chr2:66391128|66391244:-_chr2:66391390|66391509:-","UN_LINC01873_LS0002","LINC01873","lncRNA gene","no",1.12,0,0,0.006,60,0,0,"0(0)","THYM","no","TE_intersect_:66391130|chr2|66391130|66397150|L1PA2:L1:LINE|26|+","TE_intersect_:66391130|chr2|66391130|66397150|L1PA2:L1:LINE|26|+","exon_intersect_chr2:66390913|66392450","exon_intersect_chr2:66390913|66392450"]
["chr2:67443736|67462403:-","chr2:67426589|67426651:-_chr2:67438596|67438694:-_chr2:67443552|67443736:-_chr2:67462403|67462538:-_chr2:67464024|67464196:-_chr2:67562917|67563029:-_chr2:67563782|67563915:-_chr2:67564428|67564624:-","UN_LINC01829_UP_LS0029","LINC01829","lncRNA gene","no",6.86,0,0,0.008,73,0,0,"0(0)","OV;PAAD;UCS","no","TE_intersect_:67462393|chr2|67462393|67462560|FAM:Alu:SINE|192|+","TE_intersect_:67443507|chr2|67443507|67444542|MLT1D-int:ERVL-MaLR:LTR|223|-","NA","NA"]
["chr2:69461282|69461918:-","chr2:69457995|69461282:-_chr2:69461918|69466481:-","UN_AAK1_LS0003","AAK1","protein coding gene","no",1.5,0.03,0,0.015,144,0.004,3,"0(0)","LAML","no","NA","TE_intersect_:69461040|chr2|69461040|69461386|Tigger3a:TcMar-Tigger:DNA|128|+","exon_intersect_chr2:69457997|69466551","exon_intersect_chr2:69457997|69466551"]
["chr2:69799304|69804509:-","chr2:69788863|69789926:-_chr2:69790265|69799304:-_chr2:69804509|69804576:-","UN_ANXA4_LS0073","ANXA4","protein coding gene","no",2.26,0,0,0.003,29,0,0,"0(0)","LAML","no","NA","TE_intersect_:69798831|chr2|69798831|69799610|LTR19C:ERV1:LTR|117|-","intron_intersect_chr2:69803515|69804533","intron_intersect_chr2:69788141|69803393"]
["chr2:70964822|70964996:-","chr2:70964112|70964541:-_chr2:70964736|70964822:-_chr2:70964996|70965229:-","UN_VAX2_LS0053","VAX2","protein coding gene","no",0.86,0,0,0.002,22,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr2:70964958|70965406","exon_intersect_chr2:70964736|70964865"]
["chr2:71258502|71276175:-","chr2:71258237|71258502:-_chr2:71276175|71276284:-_chr2:71276382|71276469:-","UN_PAIP2B_UP_LS0002","PAIP2B","protein coding gene","no",3.18,0,0,0.015,141,0,0,"0(0)","CESC;OV","no","TE_intersect_:71276167|chr2|71276167|71276291|L2c:L2:LINE|257|+","TE_intersect_:71258190|chr2|71258190|71258705|MLT1F2:ERVL-MaLR:LTR|208|-","NA","NA"]
["chr2:72144213|72145588:-","chr2:72129242|72132619:-_chr2:72133023|72133307:-_chr2:72134761|72134916:-_chr2:72135144|72135419:-_chr2:72143989|72144213:-_chr2:72145588|72145806:-","UN_CYP26B1_LS0021","CYP26B1","protein coding gene","no",0.46,0,0,0.001,13,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr2:72144415|72147631","exon_intersect_chr2:72143989|72144415"]
["chr2:73269053|73285908:+","chr2:73269000|73269053:+_chr2:73285908|73286103:+","UN_RNU6-111P_UP_LS0004","RNU6-111P","small non-coding RNA gene","no",2.3,0,0,0.005,44,0,0,"0(0)","OV","no","NA","TE_intersect_:73285831|chr2|73285831|73286016|MIRb:MIR:SINE|288|-","exon_intersect_chr2:73268726|73269768","NA"]
["chr2:74426335|74426443:+","chr2:74425978|74426335:+_chr2:74426443|74426514:+","UN_RTKN_LS0016","RTKN","protein coding gene","no",2.24,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr2:74425836|74426574","exon_intersect_chr2:74425836|74426574"]
["chr2:74549172|74554722:+","chr2:74549079|74549172:+_chr2:74554722|74554814:+_chr2:74555154|74555453:+_chr2:74555575|74555668:+_chr2:74555894|74556078:+_chr2:74556308|74557549:+","UN_LOXL3_LS0018","LOXL3","protein coding gene","no",0.78,0,0,0.003,29,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr2:74549172|74549369","exon_intersect_chr2:74554086|74554859"]
["chr2:76575408|76577080:+","chr2:76575246|76575408:+_chr2:76577080|76577198:+_chr2:76587615|76587696:+_chr2:76772217|76772306:+_chr2:76854831|76855196:+_chr2:76857815|76857944:+_chr2:76858839|76859846:+","UN_RNA5SP98_UP_LS0040","RNA5SP98","no","no",1.37,0,0,0.001,12,0,0,"0(0)","TGCT","no","TE_intersect_:76575332|chr2|76575332|76579251|HERVH-int:ERV1:LTR|88|-","TE_intersect_:76575332|chr2|76575332|76579251|HERVH-int:ERV1:LTR|88|-","NA","NA"]
["chr2:77090900|77093660:+","chr2:77088301|77090900:+_chr2:77093660|77099864:+","UN_LRRTM4_LS0023","LRRTM4","protein coding gene","no",5.25,0,0,0.003,31,0,0,"0(0)","TGCT","no","TE_intersect_:77088676|chr2|77088676|77091793|HERVH-int:ERV1:LTR|94|+","TE_intersect_:77093286|chr2|77093286|77093666|HERVH-int:ERV1:LTR|78|+","intron_intersect_chr2:77041863|77516668","intron_intersect_chr2:77041863|77516668"]
["chr2:78758721|78760349:+","chr2:78758413|78758721:+_chr2:78760349|78760445:+_chr2:78763891|78764213:+","UN_RNU6-827P_UP_LS0001","RNU6-827P","small non-coding RNA gene","no",7.49,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:78758579|chr2|78758579|78759006|HERVH-int:ERV1:LTR|216|+","TE_intersect_:78759064|chr2|78759064|78761310|HERVH-int:ERV1:LTR|144|+","NA","NA"]
["chr2:79499242|79513514:-","chr2:79492330|79493896:-_chr2:79498070|79498155:-_chr2:79498925|79499077:-_chr2:79499177|79499242:-_chr2:79513514|79514025:-","UN_CTNNA2_LS0026","CTNNA2","protein coding gene","yes",2.86,0,0,0.013,120,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:79499241|chr2|79499241|79499329|MLT1L:ERVL-MaLR:LTR|153|-","intron_intersect_chr2:79513207|79514622","intron_intersect_chr2:79499242|79500662"]
["chr2:83464761|83479333:+","chr2:83464656|83464761:+_chr2:83479333|83479427:+_chr2:83505042|83505259:+_chr2:83506371|83507333:+","UN_LINC01809_UP_LS0003","LINC01809","lncRNA gene","no",6.08,0,0,0.001,13,0,0,"0(0)","UCS","no","TE_intersect_:83464703|chr2|83464703|83464858|MER89:ERV1:LTR|225|+","NA","NA","NA"]
["chr2:85581819|85581881:-","chr2:85581629|85581819:-_chr2:85581881|85581939:-","UN_VAMP8_LS0026","VAMP8","protein coding gene","no",3.33,0,0,0.007,64,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr2:85581576|85582031","exon_intersect_chr2:85581576|85582031"]
["chr2:86842377|86844922:-","chr2:86841582|86842377:-_chr2:86844922|86844958:-_chr2:86846684|86846773:-_chr2:86852997|86853086:-_chr2:86858057|86858416:-_chr2:86861823|86861915:-","UN_CD8B_LS0006","CD8B","protein coding gene","no",10.12,0.77,0,0.022,215,0.01,7,"0(0)","THYM","no","NA","NA","exon_intersect_chr2:86844922|86844958","intron_intersect_chr2:86842319|86844632"]
["chr2:87477970|87478120:-","chr2:87477495|87477970:-_chr2:87478120|87478265:-_chr2:87483118|87483217:-","UN_CYTOR_LS0010","CYTOR","lncRNA gene","no",2.97,0,0,0.014,135,0,0,"0(0)","DLBC;KIRC;MESO","no","TE_intersect_:87478046|chr2|87478046|87478424|MLT1B:ERVL-MaLR:LTR|167|-","NA","intron_intersect_chr2:87478034|87478122","exon_intersect_chr2:87477495|87478034"]
["chr2:89176638|89182069:-","chr2:89163942|89172550:-_chr2:89174707|89176638:-_chr2:89182069|89182504:-","UN_IGKV2-23_UP_LS0015","IGKV2-23","no","no",57.51,0,0,0.005,44,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr2:89177160|89192500","intron_intersect_chr2:89176638|89177082"]
["chr2:95075161|95075744:+","chr2:95074926|95075161:+_chr2:95075744|95075916:+_chr2:95076114|95076345:+","UN_ZNF2_UP_LS0004","ZNF2","protein coding gene","no",13.91,0.21,0,0.018,171,0.001,1,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr2:95835189|95835293:+","chr2:95816212|95834200:+_chr2:95834618|95835189:+_chr2:95835293|95836922:+","UN_FAHD2CP_UP_LS0035","FAHD2CP","pseudogene","no",0.81,0,0,0.002,17,0,0,"0(0)","LAML","no","TE_intersect_:95835030|chr2|95835030|95836001|L1PA12:L1:LINE|255|+","TE_intersect_:95835030|chr2|95835030|95836001|L1PA12:L1:LINE|255|+","NA","NA"]
["chr2:96462424|96462474:+","chr2:96460954|96462148:+_chr2:96462198|96462424:+_chr2:96462474|96463494:+","UN_ARID5A_UP_LS0018","ARID5A","protein coding gene","no",1.15,0,0,0.002,19,0,0,"0(0)","ESCA","no","TE_intersect_:96461935|chr2|96461935|96463122|SVA_F:SVA:Retroposon|66|+","TE_intersect_:96461935|chr2|96461935|96463122|SVA_F:SVA:Retroposon|66|+","NA","NA"]
["chr2:97266863|97266967:+","chr2:97266331|97266863:+_chr2:97266967|97284785:+_chr2:97284878|97285007:+_chr2:97291540|97291632:+","UN_AC159540.2_UP_LS0022","AC159540.2","lncRNA gene","no",0.64,0,0,0.005,45,0,0,"0(0)","LAML","no","TE_intersect_:97266769|chr2|97266769|97266870|L1PA12:L1:LINE|218|+","TE_intersect_:97266885|chr2|97266885|97267175|L1PA12:L1:LINE|246|+","NA","NA"]
["chr2:98149641|98162851:+","chr2:98149530|98149641:+_chr2:98162851|98162976:+_chr2:98166433|98166610:+","UN_VWA3B_LS0004","VWA3B","protein coding gene","no",2.47,0,0,0.011,106,0,0,"0(0)","GBM;LGG","no","TE_intersect_:98149241|chr2|98149241|98149791|MER51A:ERV1:LTR|109|-","NA","intron_intersect_chr2:98133982|98162851","exon_intersect_chr2:98162851|98162976"]
["chr2:98162976|98166438:+","chr2:98149742|98149952:+_chr2:98162851|98162976:+_chr2:98166438|98166614:+","UN_VWA3B_LS0010","VWA3B","protein coding gene","no",3.18,0,0,0.008,80,0,0,"0(0)","GBM;THYM","no","NA","TE_intersect_:98166364|chr2|98166364|98166663|MLT1B:ERVL-MaLR:LTR|175|+","intron_intersect_chr2:98162976|98179244","intron_intersect_chr2:98162976|98179244"]
["chr2:99363458|99363645:+","chr2:99337353|99337589:+_chr2:99360236|99360361:+_chr2:99360465|99360549:+_chr2:99361148|99361820:+_chr2:99363411|99363458:+_chr2:99363645|99363862:+_chr2:99364271|99364421:+_chr2:99368493|99368591:+_chr2:99369392|99369481:+_chr2:99371656|99371730:+_chr2:99376347|99376636:+_chr2:99379019|99379126:+_chr2:99379318|99379428:+_chr2:99382159|99382226:+_chr2:99382780|99382921:+_chr2:99389718|99389849:+_chr2:99390219|99390401:+_chr2:99390544|99390705:+_chr2:99392967|99393098:+_chr2:99394267|99394398:+_chr2:99394509|99394585:+_chr2:99394719|99394883:+_chr2:99396760|99396898:+_chr2:99398748|99398909:+_chr2:99399307|99399774:+","UN_EIF5B_LS0011","EIF5B","protein coding gene","no",0.67,0,0,0.004,35,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr2:99361820|99363645","exon_intersect_chr2:99363645|99363862"]
["chr20:10408803|10419671:-","chr20:10405184|10405687:-_chr20:10407616|10407726:-_chr20:10408628|10408803:-_chr20:10419671|10419776:-","UN_MKKS_LS0012","MKKS","protein coding gene","no",2.16,0,0,0.001,14,0,0,"0(0)","CHOL","no","TE_intersect_:10419482|chr20|10419482|10419944|MER44B:TcMar-Tigger:DNA|170|-","NA","intron_intersect_chr20:10413931|10420528","intron_intersect_chr20:10408803|10412530"]
["chr20:13358478|13359227:+","chr20:13357883|13358478:+_chr20:13359227|13362786:+","UN_GAPDHP2_UP_LS0010","GAPDHP2","pseudogene","no",2.18,0,0,0.006,53,0,0,"0(0)","TGCT","no","TE_intersect_:13358332|chr20|13358332|13359147|HERVH-int:ERV1:LTR|142|+","TE_intersect_:13359142|chr20|13359142|13360366|HERVH-int:ERV1:LTR|90|+","NA","NA"]
["chr20:15886449|15893284:-","chr20:15885818|15886449:-_chr20:15893284|15894277:-_chr20:15985503|15985790:-","UN_MACROD2_LS0080","MACROD2","protein coding gene","no",5.25,0,0,0.004,39,0,0,"0(0)","OV","no","NA","TE_intersect_:15886046|chr20|15886046|15886566|MLT1G1:ERVL-MaLR:LTR|287|-","intron_intersect_chr20:15885811|15933276","intron_intersect_chr20:15885811|15933276"]
["chr20:1695580|1695856:-","chr20:1688311|1694640:-_chr20:1695158|1695580:-_chr20:1695856|1695896:-_chr20:1697426|1697779:-_chr20:1701632|1722512:-_chr20:1727400|1727658:-_chr20:1732992|1733226:-_chr20:1741393|1741482:-_chr20:1741766|1741848:-","UN_SIRPB3P_LS0006","SIRPB3P","pseudogene","no",2.66,0,0,0.001,12,0,0,"0(0)","LAML","no","NA","TE_intersect_:1695517|chr20|1695517|1695628|MIRb:MIR:SINE|243|+","intron_intersect_chr20:1676907|1697392","intron_intersect_chr20:1676907|1697392"]
["chr20:18879864|18941116:+","chr20:18879522|18879864:+_chr20:18941116|18941274:+_chr20:19048770|19048888:+_chr20:19049184|19049380:+_chr20:19050374|19050846:+","UN_SLC24A3_UP_LS0007","SLC24A3","protein coding gene","no",2.66,0,0,0.004,43,0,0,"0(0)","ESCA","no","TE_intersect_:18875154|chr20|18875154|18880162|L1PB1:L1:LINE|128|-","TE_intersect_:18935844|chr20|18935844|18942312|L1PA7:L1:LINE|102|-","NA","NA"]
["chr20:19669895|19678698:-","chr20:19668546|19669895:-_chr20:19678698|19679589:-","UN_SLC24A3_LS0037","SLC24A3","protein coding gene","no",5.4,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:19677708|chr20|19677708|19679559|SVA_D:SVA:Retroposon|28|-","TE_intersect_:19669582|chr20|19669582|19670008|L3:CR1:LINE|329|+","intron_intersect_chr20:19673654|19681858","intron_intersect_chr20:19665889|19673601"]
["chr20:20275613|20277488:-","chr20:20271329|20271636:-_chr20:20275468|20275613:-_chr20:20277488|20277617:-","UN_CFAP61_LS0058","CFAP61","protein coding gene","no",4.59,0,0,0.005,46,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr20:20277458|20288609","intron_intersect_chr20:20267809|20277166"]
["chr20:21088409|21090042:+","chr20:21088138|21088409:+_chr20:21090042|21092560:+","UN_LINC00237_LS0003","LINC00237","lncRNA gene","no",3.29,0,0,0.003,27,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr20:21088030|21092809","intron_intersect_chr20:21088030|21092809"]
["chr20:21437982|21441229:+","chr20:21437874|21437982:+_chr20:21441229|21443179:+","UN_GSTM3P1_UP_LS0011","GSTM3P1","pseudogene","no",5.09,0,0,0.005,48,0,0,"0(0)","KIRP","no","NA","TE_intersect_:21441173|chr20|21441173|21441418|L1MD:L1:LINE|207|+","NA","NA"]
["chr20:21664753|21702965:-","chr20:21660215|21661941:-_chr20:21664216|21664299:-_chr20:21664636|21664753:-_chr20:21702965|21705502:-","UN_LINC01726_LS0018","LINC01726","lncRNA gene","no",4.54,0,0,0.004,36,0,0,"0(0)","THYM","no","NA","TE_intersect_:21664358|chr20|21664358|21664876|Charlie1b:hAT-Charlie:DNA|182|-","intron_intersect_chr20:21627442|21703322","intron_intersect_chr20:21627442|21703322"]
["chr20:21755445|21755500:-","chr20:21755232|21755445:-_chr20:21755500|21755666:-","UN_SLC25A6P1_UP_LS0016","SLC25A6P1","pseudogene","no",57,0,0,0.002,20,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chr20:24633770|24633927:+","chr20:24633477|24633770:+_chr20:24633927|24634900:+","UN_SYNDIG1_LS0063","SYNDIG1","protein coding gene","no",3.52,0,0,0.008,77,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr20:24597153|24665346","intron_intersect_chr20:24597153|24665346"]
["chr20:25090228|25090459:-","chr20:25089645|25090228:-_chr20:25090459|25090717:-","UN_VSX1_UP_LS0001","VSX1","protein coding gene","no",3.76,0,0,0.007,63,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr20:25786988|25790121:-","chr20:25773538|25775312:-_chr20:25782036|25782135:-_chr20:25786701|25786988:-_chr20:25790121|25790209:-","UN_FAM182B_LS0017","FAM182B","lncRNA gene","no",1.05,0,0,0.009,84,0,0,"0(0)","CESC","no","TE_intersect_:25790117|chr20|25790117|25790258|AluY:Alu:SINE|128|-","TE_intersect_:25786735|chr20|25786735|25787221|MER90a:ERV1:LTR|227|-","intron_intersect_chr20:25786988|25835985","intron_intersect_chr20:25786988|25835985"]
["chr20:25987589|25988120:+","chr20:25986610|25987589:+_chr20:25988120|25996863:+","UN_AL450124.1_UP_LS0015","AL450124.1","pseudogene","no",1.48,0,0,0.004,39,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr20:29081402|29082602:+","chr20:29081213|29081402:+_chr20:29082602|29082663:+_chr20:29091594|29091719:+_chr20:29094347|29094461:+_chr20:29095855|29096203:+","UN_FRG1DP_LS0004","FRG1DP","pseudogene","no",1.57,0,0,0.015,141,0,0,"0(0)","SKCM;TGCT;UCS","no","NA","NA","NA","NA"]
["chr20:30396953|30399222:+","chr20:30377144|30377721:+_chr20:30388453|30388578:+_chr20:30391197|30391308:+_chr20:30392704|30392843:+_chr20:30393551|30393655:+_chr20:30396862|30396953:+_chr20:30399222|30399342:+","UN_FRG1BP_LS0027","FRG1BP","pseudogene","no",3.92,0,0,0.005,50,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:30396862|30397251","exon_intersect_chr20:30399222|30399334"]
["chr20:31435972|31436234:+","chr20:31435438|31435972:+_chr20:31436234|31436528:+_chr20:31450029|31450257:+","UN_DEFB123_UP_LS0002","DEFB123","protein coding gene","no",3.07,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:31435871|chr20|31435871|31436167|AluSx:Alu:SINE|118|+","TE_intersect_:31436167|chr20|31436167|31436535|MLT1G:ERVL-MaLR:LTR|224|+","NA","NA"]
["chr20:31848903|31849481:-","chr20:31844297|31845657:-_chr20:31848806|31848903:-_chr20:31849481|31849583:-","UN_DUSP15_LS0001","DUSP15","protein coding gene","no",0.97,0,0,0.005,52,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr20:31848903|31849538","intron_intersect_chr20:31848903|31849538"]
["chr20:32176861|32177341:+","chr20:32176793|32176861:+_chr20:32177341|32179365:+","UN_POFUT1_UP_LS0023","POFUT1","protein coding gene","no",1.05,0,0,0.004,36,0,0,"0(0)","ESCA","no","TE_intersect_:32176478|chr20|32176478|32176940|SVA_F:SVA:Retroposon|102|+","TE_intersect_:32176957|chr20|32176957|32177598|SVA_F:SVA:Retroposon|80|+","NA","NA"]
["chr20:327309|327346:-","chr20:327199|327309:-_chr20:327346|327563:-_chr20:327687|327911:-","UN_SOX12_LS0062","SOX12","protein coding gene","no",1.86,0,0,0.005,50,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:325401|330224","exon_intersect_chr20:325401|330224"]
["chr20:33349820|33350166:+","chr20:33345348|33345671:+_chr20:33347720|33347975:+_chr20:33349328|33349820:+_chr20:33350166|33350267:+_chr20:33352638|33352784:+_chr20:33353949|33354070:+_chr20:33354384|33355529:+","UN_BPIFB9P_LS0001","BPIFB9P","pseudogene","no",2.73,0,0,0.009,83,0,0,"0(0)","THCA;THYM","no","NA","NA","intron_intersect_chr20:33349817|33350166","exon_intersect_chr20:33350166|33350267"]
["chr20:33699806|33699983:-","chr20:33698496|33699128:-_chr20:33699171|33699806:-_chr20:33699983|33700704:-","UN_E2F1_UP_LS0007","E2F1","protein coding gene","yes",5.2,0,0,0.002,17,0,0,"0(0)","ESCA","no","TE_intersect_:33698512|chr20|33698512|33700714|SVA_D:SVA:Retroposon|79|+","TE_intersect_:33698512|chr20|33698512|33700714|SVA_D:SVA:Retroposon|79|+","NA","NA"]
["chr20:34715365|34732559:-","chr20:34715067|34715365:-_chr20:34732559|34732595:-_chr20:34736690|34736758:-_chr20:34740363|34743341:-_chr20:34746807|34746928:-_chr20:34749403|34750519:-_chr20:34754722|34754835:-_chr20:34757220|34758104:-_chr20:34758805|34758933:-_chr20:34768464|34768586:-_chr20:34776293|34776448:-_chr20:34782121|34782275:-","UN_NCOA6_LS0077","NCOA6","protein coding gene","no",6.51,0,0,0.008,75,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:34732559|34732968","intron_intersect_chr20:34715365|34727259"]
["chr20:35279065|35279169:+","chr20:35278911|35279065:+_chr20:35279169|35279565:+","UN_AL121753.1_LS0016","AL121753.1","protein coding gene","no",0.57,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:35278907|35279206","exon_intersect_chr20:35278907|35279206"]
["chr20:35626183|35626216:+","chr20:35626044|35626183:+_chr20:35626216|35626333:+","UN_CPNE1_LS0001","CPNE1","protein coding gene","no",4.2,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:35626031|35626853","exon_intersect_chr20:35626031|35626853"]
["chr20:36541561|36544969:+","chr20:36541497|36541561:+_chr20:36544969|36545068:+_chr20:36548032|36548193:+_chr20:36549077|36549825:+","MYL9_LS008","MYL9","protein coding gene","no",16.25,0,0,0.006,54,0,0,"0(0)","OV","yes","NA","NA","intron_intersect_chr20:36541561|36544859","exon_intersect_chr20:36544859|36545068"]
["chr20:36781304|36782111:+","chr20:36781107|36781304:+_chr20:36782111|36782131:+","UN_SOGA1_LS0059","SOGA1","protein coding gene","no",1.16,0,0,0.003,24,0,0,"0(0)","ESCA","no","TE_intersect_:36781253|chr20|36781253|36781558|AluSx:Alu:SINE|121|+","TE_intersect_:36781833|chr20|36781833|36782127|AluSz:Alu:SINE|112|-","exon_intersect_chr20:36777442|36786637","exon_intersect_chr20:36777442|36786637"]
["chr20:38070511|38089726:+","chr20:38066181|38066256:+_chr20:38070225|38070511:+_chr20:38089726|38092366:+","UN_RPRD1B_LS0039","RPRD1B","protein coding gene","no",2.18,0,0,0.004,41,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr20:38070225|38070617","exon_intersect_chr20:38089726|38092366"]
["chr20:38600606|38601275:-","chr20:38599793|38599992:-_chr20:38600468|38600606:-_chr20:38601275|38601297:-","UN_SNHG17_UP_LS0031","SNHG17","lncRNA gene","no",2.55,0,0,0.005,52,0,0,"0(0)","CHOL","no","NA","NA","NA","NA"]
["chr20:40579345|40597848:-","chr20:40573544|40574334:-_chr20:40578995|40579345:-_chr20:40597848|40597938:-_chr20:40605460|40605544:-_chr20:40619159|40624969:-","UN_HSPE1P1_UP_LS0022","HSPE1P1","pseudogene","no",2.56,0,0,0.007,65,0,0,"0(0)","OV","no","TE_intersect_:40597832|chr20|40597832|40597919|MIR:MIR:SINE|226|-","TE_intersect_:40578925|chr20|40578925|40579415|MLT1H:ERVL-MaLR:LTR|227|-","NA","NA"]
["chr20:41646509|41653866:+","chr20:41643753|41644037:+_chr20:41645935|41646028:+_chr20:41646299|41646509:+_chr20:41653866|41657484:+","UN_AL049812.2_UP_LS0016","AL049812.2","lncRNA gene","no",2.11,0,0,0.007,65,0,0,"0(0)","LUSC","no","NA","NA","NA","NA"]
["chr20:43726898|43733263:-","chr20:43726164|43726898:-_chr20:43733263|43733621:-","UN_Z98752.4_UP_LS0003","Z98752.4","lncRNA gene","no",2.76,0,0,0.001,12,0,0,"0(0)","DLBC","no","TE_intersect_:43733041|chr20|43733041|43733373|MLT1B:ERVL-MaLR:LTR|179|+","NA","NA","exon_intersect_chr20:43726164|43726998"]
["chr20:44350734|44351868:-","chr20:44302838|44307240:-_chr20:44310976|44311562:-_chr20:44350620|44350734:-_chr20:44351868|44351950:-_chr20:44355019|44355343:-","UN_AL117382.1_LS0001","AL117382.1","lncRNA gene","no",3.87,0,0,0.006,57,0,0,"0(0)","COAD","no","TE_intersect_:44351807|chr20|44351807|44351944|MIR3:MIR:SINE|316|-","NA","exon_intersect_chr20:44351868|44352102","exon_intersect_chr20:44350620|44350856"]
["chr20:45119186|45124107:-","chr20:45109452|45110013:-_chr20:45110400|45110540:-_chr20:45110635|45110775:-_chr20:45114999|45115134:-_chr20:45115320|45115525:-_chr20:45116174|45116324:-_chr20:45119047|45119186:-_chr20:45124107|45124265:-_chr20:45137715|45137897:-_chr20:45138517|45138726:-","UN_WFDC5_UP_LS0008","WFDC5","protein coding gene","no",2.06,0,0,0.002,22,0,0,"0(0)","KIRP","no","NA","TE_intersect_:45119162|chr20|45119162|45119212|Tigger1:TcMar-Tigger:DNA|140|-","exon_intersect_chr20:45124107|45124265","NA"]
["chr20:45465339|45479942:+","chr20:45465217|45465339:+_chr20:45479942|45480094:+_chr20:45481371|45481531:+","UN_AL031663.2_UP_LS0002","AL031663.2","lncRNA gene","no",18.26,0,0,0.002,15,0,0,"0(0)","SARC","no","NA","NA","NA","exon_intersect_chr20:45479439|45480094"]
["chr20:45898897|45898925:+","chr20:45890292|45891425:+_chr20:45891569|45891762:+_chr20:45891916|45892027:+_chr20:45892273|45892323:+_chr20:45892398|45892484:+_chr20:45892725|45892880:+_chr20:45893220|45893311:+_chr20:45893988|45894072:+_chr20:45894650|45894741:+_chr20:45894823|45894901:+_chr20:45894994|45895133:+_chr20:45896965|45897040:+_chr20:45897717|45897806:+_chr20:45898005|45898109:+_chr20:45898367|45898897:+_chr20:45898925|45899531:+_chr20:45902275|45902325:+","UN_PLTP_LS0003","PLTP","protein coding gene","no",11.22,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr20:45898621|45899063","exon_intersect_chr20:45898621|45899063"]
["chr20:45899012|45899480:-","chr20:45898806|45899012:-_chr20:45899480|45899538:-_chr20:45899622|45899685:-_chr20:45899836|45899878:-_chr20:45902267|45902334:-_chr20:45902440|45902604:-_chr20:45904800|45904847:-_chr20:45906280|45906359:-_chr20:45907692|45907755:-_chr20:45907841|45907904:-_chr20:45909516|45909671:-_chr20:45909942|45910070:-_chr20:45911152|45911251:-_chr20:45911353|45911463:-_chr20:45912079|45912147:-","UN_PLTP_LS0009","PLTP","protein coding gene","no",133.12,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:45899462|45899538","exon_intersect_chr20:45898621|45899063"]
["chr20:46563551|46563910:-","chr20:46557833|46560198:-_chr20:46563414|46563551:-_chr20:46563910|46563946:-","UN_SLC13A3_LS0007","SLC13A3","protein coding gene","no",1.63,0,0,0.002,21,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr20:46563551|46566229","intron_intersect_chr20:46563551|46566229"]
["chr20:48022658|48024139:-","chr20:48007441|48011408:-_chr20:48014292|48015388:-_chr20:48022128|48022658:-_chr20:48024139|48024233:-","UN_LINC01522_UP_LS0016","LINC01522","lncRNA gene","no",7.44,0,0,0.002,20,0,0,"0(0)","GBM","no","TE_intersect_:48023568|chr20|48023568|48024410|L1MEg:L1:LINE|275|+","TE_intersect_:48022388|chr20|48022388|48023264|L1MEg:L1:LINE|294|+","NA","NA"]
["chr20:48276156|48280421:+","chr20:48264913|48265107:+_chr20:48265458|48276156:+_chr20:48280421|48282338:+","UN_LINC00494_UP_LS0018","LINC00494","lncRNA gene","no",2.24,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","TE_intersect_:48280400|chr20|48280400|48280694|AluJb:Alu:SINE|143|-","NA","NA"]
["chr20:49294537|49295403:+","chr20:49279116|49279208:+_chr20:49280485|49280570:+_chr20:49289045|49289141:+_chr20:49290897|49291148:+_chr20:49294319|49294537:+_chr20:49295403|49295594:+","UN_KCNB1_LS0001","KCNB1","protein coding gene","no",1.82,0,0,0.004,39,0,0,"0(0)","TGCT","no","TE_intersect_:49294401|chr20|49294401|49294665|L1ME1:L1:LINE|264|+","NA","intron_intersect_chr20:49291148|49295403","exon_intersect_chr20:49295403|49295738"]
["chr20:50308951|50310762:+","chr20:50308834|50308951:+_chr20:50310762|50310788:+_chr20:50311033|50311706:+_chr20:50311805|50312014:+_chr20:50312352|50312430:+_chr20:50313300|50315788:+","UN_LINC01270_LS0026","LINC01270","lncRNA gene","no",1.44,0,0,0.009,91,0,0,"0(0)","LUAD","no","NA","NA","intron_intersect_chr20:50298413|50310711","exon_intersect_chr20:50310711|50311249"]
["chr20:51792926|51802279:-","chr20:51784265|51784684:-_chr20:51788861|51789141:-_chr20:51790022|51792352:-_chr20:51792759|51792926:-_chr20:51802279|51802475:-","UN_SALL4_LS0012","SALL4","protein coding gene","yes",1.65,0,0,0.003,29,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr20:51802279|51802520","exon_intersect_chr20:51792759|51793078"]
["chr20:54189399|54189595:+","chr20:54174001|54174142:+_chr20:54178392|54178488:+_chr20:54182556|54182634:+_chr20:54189360|54189399:+_chr20:54189595|54189850:+","UN_PFDN4_UP_LS0030","PFDN4","protein coding gene","no",3.78,0,0,0.034,326,0,0,"0(0)","BLCA;CESC;ESCA;HNSC;LUAD","no","NA","NA","NA","NA"]
["chr20:56736669|56738278:+","chr20:56736285|56736669:+_chr20:56738278|56738512:+_chr20:56740650|56742215:+_chr20:56762383|56762505:+","UN_AL157414.2_UP_LS0004","AL157414.2","lncRNA gene","no",3.85,0,0,0.01,99,0,0,"0(0)","BRCA;TGCT","no","NA","TE_intersect_:56738053|chr20|56738053|56738305|MER20B:hAT-Charlie:DNA|264|+","NA","NA"]
["chr20:57132119|57135832:-","chr20:57118340|57120207:-_chr20:57131995|57132119:-_chr20:57135832|57135986:-","UN_RNU6-929P_UP_LS0022","RNU6-929P","small non-coding RNA gene","no",3.72,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr20:57529467|57529654:+","chr20:57528694|57528793:+_chr20:57529187|57529263:+_chr20:57529379|57529467:+_chr20:57529654|57530101:+","UN_PCK1_UP_LS0018","PCK1","protein coding gene","no",3.48,0,0,0.004,39,0,0,"0(0)","OV","no","NA","TE_intersect_:57529487|chr20|57529487|57529950|MLT1B:ERVL-MaLR:LTR|238|+","NA","NA"]
["chr20:58427364|58427470:+","chr20:58425956|58427364:+_chr20:58427470|58430686:+","UN_VAPB_LS0026","VAPB","protein coding gene","no",14.5,0,0,0.004,36,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr20:58418363|58431033","intron_intersect_chr20:58418363|58431033"]
["chr20:59001644|59026413:-","chr20:58995285|58995759:-_chr20:58996639|58996801:-_chr20:58997603|58997753:-_chr20:59001465|59001644:-_chr20:59026413|59026469:-_chr20:59028807|59028841:-_chr20:59030303|59030429:-_chr20:59032220|59032292:-","UN_AL109840.2_UP_LS0003","AL109840.2","no","no",2.94,0,0,0.002,21,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr20:59025467|59030429","intron_intersect_chr20:59001644|59006042"]
["chr20:59962867|59968967:+","chr20:59957039|59958795:+_chr20:59962674|59962867:+_chr20:59968967|59969023:+_chr20:59970076|59970186:+_chr20:59971962|59972123:+_chr20:59982923|59983070:+_chr20:59984639|59984805:+_chr20:59985001|59985129:+_chr20:59987453|59987638:+_chr20:59988904|59989163:+_chr20:59992378|59992520:+_chr20:59994250|59994489:+_chr20:59995833|59996054:+_chr20:59996631|59996761:+_chr20:59999586|59999663:+_chr20:60001343|60001411:+_chr20:60002813|60002866:+_chr20:60006713|60006787:+_chr20:60012527|60013113:+","UN_CDH26_LS0004","CDH26","protein coding gene","no",1.09,0.01,0,0.007,68,0.001,1,"0(0)","ESCA;LUSC","no","TE_intersect_:59962695|chr20|59962695|59963006|L2a:L2:LINE|315|-","NA","intron_intersect_chr20:59958795|59968967","exon_intersect_chr20:59968967|59969023"]
["chr20:6054974|6097417:+","chr20:6054906|6054974:+_chr20:6097417|6097505:+_chr20:6113167|6113277:+_chr20:6113445|6113866:+","UN_AL109618.1_UP_LS0006","AL109618.1","pseudogene","no",4.85,0,0,0.013,124,0,0,"0(0)","MESO;OV;UCS","no","TE_intersect_:6054696|chr20|6054696|6055055|THE1A:ERVL-MaLR:LTR|111|+","NA","NA","intron_intersect_chr20:6097033|6097524"]
["chr20:61353168|61354349:-","chr20:61351269|61352571:-_chr20:61352765|61352875:-_chr20:61353068|61353168:-_chr20:61354349|61354510:-_chr20:61355194|61355524:-","UN_CDH4_LS0018","CDH4","protein coding gene","yes",3.54,0,0,0.01,92,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr20:61254937|61369879","intron_intersect_chr20:61254937|61369879"]
["chr20:62312944|62313100:+","chr20:62312888|62312944:+_chr20:62313100|62313251:+","UN_LAMA5_LS0101","LAMA5","protein coding gene","no",2.41,0,0,0.005,45,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:62312632|62313010","exon_intersect_chr20:62313088|62313250"]
["chr20:62758393|62760018:+","chr20:62736765|62737039:+_chr20:62754685|62754886:+_chr20:62758266|62758393:+_chr20:62760018|62762787:+","UN_NTSR1_LS0027","NTSR1","protein coding gene","no",4.24,0,0,0.005,45,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr20:62758356|62760018","exon_intersect_chr20:62760018|62762771"]
["chr20:63027392|63027903:-","chr20:63025416|63026525:-_chr20:63026898|63027116:-_chr20:63027205|63027392:-_chr20:63027903|63028413:-","UN_LINC01749_LS0008","LINC01749","lncRNA gene","no",3.7,0,0,0.001,13,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr20:63009473|63034217","intron_intersect_chr20:63009473|63034217"]
["chr20:63404299|63404370:+","chr20:63403827|63404299:+_chr20:63404370|63404615:+","UN_KCNQ2_LS0043","KCNQ2","protein coding gene","no",7.97,0,0,0.004,43,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr20:63400210|63407375","exon_intersect_chr20:63400210|63407375"]
["chr20:63521906|63521995:-","chr20:63521672|63521906:-_chr20:63521995|63522185:-","UN_PPDPF_LS0069","PPDPF","protein coding gene","no",7.85,0,0,0.006,62,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr20:63521284|63522206","exon_intersect_chr20:63521284|63522206"]
["chr20:63864270|63864824:-","chr20:63861212|63864270:-_chr20:63864824|63865072:-","UN_C20orf181_UP_LS0006","C20orf181","lncRNA gene","no",1.07,0,0,0.007,70,0,0,"0(0)","OV","no","NA","TE_intersect_:63864154|chr20|63864154|63864284|MIR:MIR:SINE|262|+","NA","exon_intersect_chr20:63861212|63864293"]
["chr20:63979849|63980096:-","chr20:63974114|63975532:-_chr20:63975692|63975832:-_chr20:63976971|63977142:-_chr20:63977225|63977406:-_chr20:63979377|63979849:-_chr20:63980096|63980162:-","UN_ZNF512B_UP_LS0002","ZNF512B","protein coding gene","no",0.25,0,0,0.003,33,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr20:63980008|63981135","intron_intersect_chr20:63979642|63979854"]
["chr20:64164739|64198862:+","chr20:64164430|64164739:+_chr20:64198862|64198916:+_chr20:64199892|64199922:+_chr20:64205035|64205097:+_chr20:64205553|64205800:+_chr20:64207594|64208487:+_chr20:64211206|64211340:+_chr20:64212048|64212138:+_chr20:64213534|64213647:+_chr20:64217067|64217281:+_chr20:64218911|64219035:+_chr20:64219713|64219982:+_chr20:64221893|64222047:+_chr20:64223111|64223173:+_chr20:64227415|64227477:+_chr20:64227888|64227971:+_chr20:64232164|64232385:+_chr20:64236555|64236646:+_chr20:64237287|64237390:+_chr20:64239760|64239903:+_chr20:64240320|64242253:+","UN_MYT1_LS0023","MYT1","protein coding gene","no",2.89,0,0,0.007,65,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr20:64164739|64190063","exon_intersect_chr20:64198862|64198916"]
["chr20:64328499|64329678:+","chr20:64328190|64328499:+_chr20:64329678|64329825:+","UN_LINC00266-1_UP_LS0014","LINC00266-1","lncRNA gene","no",2.15,0,0,0.006,59,0,0,"0(0)","PCPG","no","NA","TE_intersect_:64329656|chr20|64329656|64329812|AluJr:Alu:SINE|167|-","NA","NA"]
["chr20:7066993|7067849:+","chr20:6838576|6838677:+_chr20:6843649|6843792:+_chr20:7064841|7064907:+_chr20:7066728|7066993:+_chr20:7067849|7067938:+_chr20:7069525|7069694:+_chr20:7146357|7146656:+","UN_AL096799.1_UP_LS0036","AL096799.1","lncRNA gene","no",3.33,0,0,0.011,107,0,0,"0(0)","KIRC","no","TE_intersect_:7066723|chr20|7066723|7067467|L1PB1:L1:LINE|102|+","TE_intersect_:7067832|chr20|7067832|7067919|L1M5:L1:LINE|132|-","NA","NA"]
["chr20:8533783|8596021:+","chr20:8533117|8533783:+_chr20:8596021|8597782:+","UN_PLCB1_LS0025","PLCB1","protein coding gene","no",1.26,0,0,0.002,21,0,0,"0(0)","ESCA","no","TE_intersect_:8532865|chr20|8532865|8534061|L1PA3:L1:LINE|30|-","TE_intersect_:8595101|chr20|8595101|8601127|L1PA2:L1:LINE|19|-","intron_intersect_chr20:8372166|8600715","intron_intersect_chr20:8372166|8600715"]
["chr20:9679607|9711286:-","chr20:9678624|9679607:-_chr20:9711286|9711435:-_chr20:9818680|9818785:-_chr20:9838762|9838867:-","UN_PAK5_LS0012","PAK5","protein coding gene","no",3.4,0,0,0.008,72,0,0,"0(0)","LUSC","no","NA","NA","exon_intersect_chr20:9711286|9711435","intron_intersect_chr20:9644339|9711286"]
["chr21:14489063|14498442:-","chr21:14485228|14489063:-_chr21:14498442|14498592:-_chr21:14500529|14500735:-_chr21:14510310|14510461:-_chr21:14512444|14521221:-_chr21:14546205|14546341:-","UN_SAMSN1_LS0004","SAMSN1","protein coding gene","no",6.2,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","TE_intersect_:14489035|chr21|14489035|14489105|MamSINE1:tRNA-RTE:SINE|304|-","exon_intersect_chr21:14498442|14498592","intron_intersect_chr21:14486114|14495700"]
["chr21:15538810|15543525:-","chr21:15538144|15538810:-_chr21:15543525|15543646:-","UN_AJ009632.2_LS0033","AJ009632.2","lncRNA gene","no",3.82,0,0,0.006,61,0,0,"0(0)","OV","no","TE_intersect_:15543393|chr21|15543393|15543855|L1M1:L1:LINE|210|+","NA","NA","NA"]
["chr21:17026325|17028190:-","chr21:17019694|17019810:-_chr21:17026197|17026325:-_chr21:17028190|17028247:-_chr21:17070872|17070973:-","UN_AF212831.1_UP_LS0027","AF212831.1","lncRNA gene","no",1.8,0,0,0.008,74,0,0,"0(0)","HNSC;LUSC","no","TE_intersect_:17028180|chr21|17028180|17028635|L1M5:L1:LINE|324|+","NA","NA","NA"]
["chr21:17716227|17720645:-","chr21:17715915|17716227:-_chr21:17720645|17721150:-","UN_AP000432.1_UP_LS0008","AP000432.1","lncRNA gene","no",3.39,0,0,0.008,75,0,0,"0(0)","HNSC","no","TE_intersect_:17718638|chr21|17718638|17721106|SVA_F:SVA:Retroposon|81|-","TE_intersect_:17716207|chr21|17716207|17716887|L1PB4:L1:LINE|208|+","NA","NA"]
["chr21:17962553|18027869:+","chr21:17901263|17901424:+_chr21:17917220|17917400:+_chr21:17917673|17917787:+_chr21:17962477|17962553:+_chr21:18027869|18027971:+_chr21:18224516|18224584:+_chr21:18229346|18229394:+_chr21:18256509|18256818:+_chr21:18256970|18257127:+_chr21:18260200|18260286:+_chr21:18262791|18262893:+_chr21:18265954|18267365:+","UN_CHODL_LS0048","CHODL","protein coding gene","no",1.93,0,0,0.006,61,0,0,"0(0)","TGCT","no","NA","TE_intersect_:18027676|chr21|18027676|18028046|MLT1A0:ERVL-MaLR:LTR|217|+","intron_intersect_chr21:17917400|18022370","intron_intersect_chr21:18024750|18027872"]
["chr21:18726254|18737924:-","chr21:18704216|18704239:-_chr21:18705470|18705556:-_chr21:18726197|18726254:-_chr21:18737924|18738025:-_chr21:18759774|18760494:-","UN_MIR548XHG_LS0026","MIR548XHG","lncRNA gene","no",2.14,0,0,0.003,24,0,0,"0(0)","TGCT","no","NA","TE_intersect_:18725907|chr21|18725907|18726336|L1MA4A:L1:LINE|212|+","exon_intersect_chr21:18737924|18738025","intron_intersect_chr21:18704454|18737924"]
["chr21:22403068|22406029:+","chr21:22396203|22396623:+_chr21:22399894|22399958:+_chr21:22402935|22403068:+_chr21:22406029|22406146:+_chr21:22410226|22410347:+_chr21:22420770|22420819:+_chr21:22423776|22423907:+","UN_AP000561.1_LS0012","AP000561.1","lncRNA gene","no",4.07,0,0,0.034,330,0,0,"0(0)","LIHC;MESO;OV;SARC;TGCT;UCS","no","TE_intersect_:22402668|chr21|22402668|22403181|MER51-int:ERV1:LTR|158|+","TE_intersect_:22405992|chr21|22405992|22406303|AluSx:Alu:SINE|112|-","intron_intersect_chr21:22212813|22420770","intron_intersect_chr21:22212813|22420770"]
["chr21:25560689|25561646:+","chr21:25560364|25560689:+_chr21:25561646|25562014:+_chr21:25562125|25562257:+_chr21:25569837|25569921:+_chr21:25573893|25575168:+","UN_MIR155HG_UP_LS0005","MIR155HG","lncRNA gene","yes",0.81,0,0,0.001,11,0,0,"0(0)","DLBC","no","TE_intersect_:25560611|chr21|25560611|25560854|MIR:MIR:SINE|247|+","NA","NA","NA"]
["chr21:27526784|27546517:+","chr21:27526651|27526784:+_chr21:27546517|27550227:+","UN_LINC01673_UP_LS0002","LINC01673","lncRNA gene","no",4.15,0,0,0.004,41,0,0,"0(0)","SARC","no","TE_intersect_:27526500|chr21|27526500|27526865|THE1B:ERVL-MaLR:LTR|107|+","NA","NA","NA"]
["chr21:28228478|28269956:-","chr21:28190645|28197822:-_chr21:28212240|28212351:-_chr21:28217178|28217347:-_chr21:28225884|28225991:-_chr21:28228362|28228478:-_chr21:28269956|28270081:-","UN_AP001605.1_UP_LS0045","AP001605.1","lncRNA gene","no",2.39,0,0,0.006,59,0,0,"0(0)","OV","no","TE_intersect_:28269870|chr21|28269870|28270234|THE1B:ERVL-MaLR:LTR|140|-","NA","NA","exon_intersect_chr21:28228362|28228667"]
["chr21:30530963|30567987:+","chr21:30530724|30530963:+_chr21:30567987|30568037:+_chr21:30619829|30619951:+_chr21:30620591|30621047:+","UN_KRTAP6-3_UP_LS0001","KRTAP6-3","protein coding gene","no",6.82,0,0,0.005,49,0,0,"0(0)","TGCT","no","NA","TE_intersect_:30567917|chr21|30567917|30568120|MamRep605:LTR?:LTR?|315|+","NA","NA"]
["chr21:30707309|30710609:-","chr21:30706719|30707309:-_chr21:30710609|30710705:-_chr21:30722100|30722233:-_chr21:30725517|30725744:-","UN_KRTAP6-1_UP_LS0005","KRTAP6-1","protein coding gene","no",9.73,0,0,0.003,24,0,0,"0(0)","MESO","no","TE_intersect_:30710525|chr21|30710525|30710878|THE1B:ERVL-MaLR:LTR|123|-","TE_intersect_:30707030|chr21|30707030|30707331|AluSp:Alu:SINE|80|+","NA","NA"]
["chr21:31559595|31565309:+","chr21:31559331|31559595:+_chr21:31565309|31566026:+","UN_SOD1_UP_LS0001","SOD1","protein coding gene","no",2.25,0,0,0.049,469,0,0,"0(0)","BLCA;BRCA;CESC;ESCA;GBM;LUSC;OV;TGCT;THYM;UCS","no","NA","TE_intersect_:31565277|chr21|31565277|31565581|AluSx:Alu:SINE|138|-","intron_intersect_chr21:31559595|31559919","NA"]
["chr21:33070374|33070411:-","chr21:33070177|33070374:-_chr21:33070411|33070472:-","UN_OLIG1_LS0005","OLIG1","protein coding gene","no",1.65,0,0,0.003,29,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr21:33070144|33072420","exon_intersect_chr21:33070144|33072420"]
["chr21:34841165|34883483:+","chr21:34836836|34836946:+_chr21:34840612|34840655:+_chr21:34841010|34841165:+_chr21:34883483|34883577:+_chr21:34884314|34885061:+","UN_RUNX1_LS0054","RUNX1","protein coding gene","yes",5.55,0,0,0.003,29,0,0,"0(0)","ACC;LIHC","no","NA","NA","intron_intersect_chr21:34834601|34856289","intron_intersect_chr21:34880713|34886843"]
["chr21:35864467|35886210:-","chr21:34791786|34792610:-_chr21:34799301|34799462:-_chr21:34834410|34834601:-_chr21:34859474|34859578:-_chr21:34880557|34880713:-_chr21:34886843|34887096:-_chr21:34892925|34892963:-_chr21:35048842|35048958:-_chr21:35064936|35065072:-_chr21:35461961|35462025:-_chr21:35580660|35580929:-_chr21:35864285|35864467:-_chr21:35886210|35887186:-","UN_RUNX1_LS0147","RUNX1","protein coding gene","yes",2.29,0,0,0.003,31,0,0,"0(0)","TGCT","no","TE_intersect_:35886194|chr21|35886194|35886255|MIR3:MIR:SINE|311|+","TE_intersect_:35863852|chr21|35863852|35864509|L1MC5:L1:LINE|275|+","intron_intersect_chr21:35864467|35887195","intron_intersect_chr21:35864467|35887195"]
["chr21:36561213|36576411:-","chr21:36526280|36526527:-_chr21:36561080|36561213:-_chr21:36576411|36576569:-","UN_CLDN14_LS0034","CLDN14","protein coding gene","no",4.91,0,0,0.004,40,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr21:36576411|36576569","intron_intersect_chr21:36542855|36576411"]
["chr21:38141310|38154433:+","chr21:38141199|38141310:+_chr21:38154433|38154529:+_chr21:38156304|38156520:+","UN_DSCR8_LS0002","DSCR8","lncRNA gene","no",4.56,0,0,0.009,89,0,0,"0(0)","BRCA;PCPG","no","TE_intersect_:38141066|chr21|38141066|38141444|MSTA:ERVL-MaLR:LTR|154|+","TE_intersect_:38154380|chr21|38154380|38154550|AluSz6:Alu:SINE|188|-","intron_intersect_chr21:38122668|38154415","exon_intersect_chr21:38154415|38154529"]
["chr21:39348933|39348960:+","chr21:39348786|39348933:+_chr21:39348960|39349122:+","UN_HMGN1_LS0022","HMGN1","protein coding gene","no",9.4,0,0,0.006,62,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr21:39348903|39349200","exon_intersect_chr21:39348903|39349200"]
["chr21:41172114|41172409:-","chr21:41168582|41172114:-_chr21:41172409|41186342:-_chr21:41186448|41186785:-","UN_BACE2_LS0015","BACE2","protein coding gene","no",1.44,0,0,0.002,17,0,0,"0(0)","TGCT","no","TE_intersect_:41172380|chr21|41172380|41172590|MIRb:MIR:SINE|320|-","NA","intron_intersect_chr21:41168575|41175231","intron_intersect_chr21:41168575|41175231"]
["chr21:42131447|42131592:+","chr21:42127678|42131447:+_chr21:42131592|42131627:+_chr21:42131661|42137631:+","UN_UMODL1_LS0024","UMODL1","protein coding gene","no",16,0,0,0.002,22,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr21:42129797|42137439","intron_intersect_chr21:42129797|42137439"]
["chr21:42235388|42271070:+","chr21:42235344|42235388:+_chr21:42271070|42271187:+_chr21:42273303|42273435:+_chr21:42276895|42276945:+_chr21:42282274|42282419:+_chr21:42284560|42284683:+_chr21:42285880|42285994:+_chr21:42287889|42288312:+_chr21:42290050|42290218:+_chr21:42291092|42291192:+_chr21:42291498|42291656:+_chr21:42294542|42297244:+","UN_ABCG1_LS0003","ABCG1","protein coding gene","no",1.61,0,0,0.004,34,0.001,1,"0(0)","KICH","no","NA","NA","intron_intersect_chr21:42225914|42256084","exon_intersect_chr21:42271070|42271187"]
["chr21:42684304|42686192:+","chr21:42684080|42684304:+_chr21:42686192|42686262:+_chr21:42687917|42687994:+_chr21:42698968|42699011:+_chr21:42732070|42732124:+_chr21:42733356|42733426:+_chr21:42743776|42743860:+_chr21:42751116|42751197:+_chr21:42753990|42754064:+_chr21:42758999|42759085:+_chr21:42760328|42760432:+_chr21:42760825|42760907:+_chr21:42762083|42762239:+_chr21:42765381|42765494:+_chr21:42768188|42768292:+_chr21:42769027|42769155:+_chr21:42770703|42770798:+_chr21:42772439|42772520:+_chr21:42775283|42775509:+","UN_PDE9A_LS0007","PDE9A","protein coding gene","no",1.15,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr21:42653883|42686192","exon_intersect_chr21:42686192|42686262"]
["chr21:43175399|43190476:+","chr21:43175224|43175399:+_chr21:43190476|43190602:+_chr21:43190683|43191636:+","UN_AP001046.1_UP_LS0002","AP001046.1","lncRNA gene","no",2.23,0,0,0.008,79,0,0,"0(0)","ACC;KICH;OV","no","NA","TE_intersect_:43190458|chr21|43190458|43190590|AluJr:Alu:SINE|197|-","NA","NA"]
["chr21:43737678|43737721:-","chr21:43737529|43737678:-_chr21:43737721|43737909:-","UN_PDXK_LS0024","PDXK","protein coding gene","no",2.04,0,0,0.003,30,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr21:43736954|43738861","exon_intersect_chr21:43736954|43738861"]
["chr21:44258694|44259437:-","chr21:44246352|44246562:-_chr21:44249026|44249111:-_chr21:44250810|44250949:-_chr21:44251623|44251698:-_chr21:44254617|44254705:-_chr21:44256067|44256154:-_chr21:44258523|44258694:-_chr21:44259437|44259549:-_chr21:44259632|44259711:-_chr21:44260795|44260839:-_chr21:44261154|44261266:-_chr21:44261740|44261890:-","DNMT3L_LS014","DNMT3L","protein coding gene","no",158.77,0,0.67,0.015,146,0,0,"0.001(20)","TGCT","yes","NA","NA","exon_intersect_chr21:44259437|44259549","intron_intersect_chr21:44258694|44259437"]
["chr21:44509204|44509313:+","chr21:44506807|44507099:+_chr21:44507870|44508309:+_chr21:44508727|44508929:+_chr21:44509079|44509204:+_chr21:44509313|44509406:+_chr21:44509823|44509927:+_chr21:44515497|44520892:+","UN_TSPEAR_LS0025","TSPEAR","protein coding gene","no",3.44,0,0,0.012,117,0,0,"0(0)","OV;UCS","no","NA","NA","exon_intersect_chr21:44509199|44509386","exon_intersect_chr21:44509199|44509386"]
["chr21:44974159|44976680:+","chr21:44973975|44974159:+_chr21:44976680|44976973:+","UN_FAM207A_LS0052","FAM207A","protein coding gene","no",19.26,0.68,0,0.003,28,0.001,1,"0(0)","SKCM","no","NA","NA","intron_intersect_chr21:44973265|44976680","exon_intersect_chr21:44976680|44976989"]
["chr21:45632500|45632669:+","chr21:45632315|45632500:+_chr21:45632669|45634791:+","UN_PCBP3_UP_LS0009","PCBP3","protein coding gene","no",2.57,0,0,0.005,50,0,0,"0(0)","THYM","no","TE_intersect_:45632431|chr21|45632431|45633131|ERVL-E-int:ERVL:LTR|339|-","TE_intersect_:45632431|chr21|45632431|45633131|ERVL-E-int:ERVL:LTR|339|-","NA","NA"]
["chr21:46004240|46004298:-","chr21:46003709|46004240:-_chr21:46004298|46004760:-","UN_COL6A1_LS0177","COL6A1","protein coding gene","no",8.04,0,0,0.002,23,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr21:46003391|46005050","exon_intersect_chr21:46003391|46005050"]
["chr21:5011874|5012548:+","chr21:5011799|5011874:+_chr21:5012548|5012687:+_chr21:5014386|5014471:+_chr21:5016935|5017145:+","FP565260.4_LS001","FP565260.4","protein coding gene","no",9.74,0.03,0,0.024,233,0.01,7,"0(0)","TGCT","yes","NA","NA","intron_intersect_chr21:5011874|5012548","exon_intersect_chr21:5012548|5012687"]
["chr21:6802338|6810857:+","chr21:6799421|6802338:+_chr21:6810857|6812000:+_chr21:6848333|6853391:+","UN_FP475955.3_LS0003","FP475955.3","lncRNA gene","no",1.01,0,0,0.003,26,0,0,"0(0)","BRCA","no","NA","TE_intersect_:6809378|chr21|6809378|6810899|L1MA7:L1:LINE|194|-","intron_intersect_chr21:6797785|6810857","exon_intersect_chr21:6810857|6812297"]
["chr21:8215557|8259678:-","chr21:8215100|8215557:-_chr21:8259678|8259793:-_chr21:8398568|8398591:-_chr21:8442712|8443273:-","UN_FP671120.3_UP_LS0136","FP671120.3","lncRNA gene","no",323.55,0,0,0.003,25,0,0,"0(0)","GBM","no","TE_intersect_:8259001|chr21|8259001|8260971|LSU-rRNA_Hsa:rRNA:rRNA|4|+","TE_intersect_:8214772|chr21|8214772|8218941|LSU-rRNA_Hsa:rRNA:rRNA|2|+","NA","intron_intersect_chr21:8212724|8217953"]
["chr21:8222567|8222961:+","chr21:8213856|8222567:+_chr21:8222961|8223057:+_chr21:8223185|8223525:+","UN_FP671120.1_LS0351","FP671120.1","lncRNA gene","no",14.77,0,0,0.009,84,0.001,1,"0(0)","STAD;TGCT;THYM","no","NA","TE_intersect_:8222946|chr21|8222946|8223054|AluJb:Alu:SINE|204|-","intron_intersect_chr21:8218776|8222961","exon_intersect_chr21:8222961|8223057"]
["chr21:8399751|8405960:+","chr21:8398075|8399751:+_chr21:8405960|8406056:+_chr21:8406184|8406468:+","UN_FP236383.1_LS0304","FP236383.1","lncRNA gene","no",46.27,0,0,0.003,31,0,0,"0(0)","TGCT;THYM","no","TE_intersect_:8397806|chr21|8397806|8401980|LSU-rRNA_Hsa:rRNA:rRNA|4|+","TE_intersect_:8405945|chr21|8405945|8406053|AluJb:Alu:SINE|204|-","intron_intersect_chr21:8395759|8400991","exon_intersect_chr21:8405960|8406056"]
["chr21:8442206|8466428:+","chr21:8441949|8442206:+_chr21:8466428|8466527:+","UN_RPSAP68_UP_LS0918","RPSAP68","pseudogene","no",10.29,0,0,0.006,58,0,0,"0(0)","OV","no","TE_intersect_:8442036|chr21|8442036|8446211|LSU-rRNA_Hsa:rRNA:rRNA|2|+","NA","NA","NA"]
["chr21:8836649|9127489:-","chr21:8833401|8834676:-_chr21:8836527|8836649:-_chr21:9127489|9127547:-_chr21:9128960|9129233:-","UN_SNX18P10_UP_LS0012","SNX18P10","pseudogene","no",3.52,0,0,0.026,253,0,0,"0(0)","ACC;PCPG;SARC;SKCM;UCS","no","NA","TE_intersect_:8836369|chr21|8836369|8836677|AluSp:Alu:SINE|120|+","exon_intersect_chr21:9127489|9127547","NA"]
["chr21:9614145|9677372:+","chr21:9614098|9614145:+_chr21:9677372|9677569:+_chr21:9678230|9678353:+_chr21:9679515|9679906:+","UN_AC018692.2_UP_LS0002","AC018692.2","pseudogene","no",7.66,0,0,0.018,177,0,0,"0(0)","SKCM;UVM","no","NA","TE_intersect_:9677334|chr21|9677334|9677387|L1PB:L1:LINE|250|+","NA","NA"]
["chr21:9809902|9810093:-","chr21:9806094|9807102:-_chr21:9807735|9807820:-_chr21:9808174|9808361:-_chr21:9809067|9809181:-_chr21:9809673|9809902:-_chr21:9810093|9810503:-","UN_LINC01667_LS0010","LINC01667","lncRNA gene","no",7.16,0,0,0.011,107,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr21:9809723|9810381","intron_intersect_chr21:9809723|9810381"]
["chr22:11911144|11913040:+","chr22:11910758|11911144:+_chr22:11913040|11916101:+","UN_FRG1GP_UP_LS0053","FRG1GP","pseudogene","no",1.09,0,0,0.005,46,0,0,"0(0)","CHOL;SKCM","no","NA","NA","NA","NA"]
["chr22:15291025|15347116:+","chr22:15290361|15291025:+_chr22:15347116|15351209:+","UN_BNIP3P2_UP_LS0002","BNIP3P2","pseudogene","no",6.9,0,0,0.006,53,0,0,"0(0)","DLBC;LUAD","no","NA","NA","intron_intersect_chr22:15291024|15295332","NA"]
["chr22:16808083|16825291:-","chr22:16783512|16784409:-_chr22:16799771|16800024:-_chr22:16807739|16808083:-_chr22:16825291|16825513:-","UN_LINC01665_UP_LS0002","LINC01665","lncRNA gene","no",2.86,0,0,0.004,38,0,0,"0(0)","ACC","no","NA","NA","NA","intron_intersect_chr22:16808083|16821607"]
["chr22:17738214|17739400:+","chr22:17628851|17628906:+_chr22:17638102|17638886:+_chr22:17655662|17655832:+_chr22:17662899|17663013:+_chr22:17683214|17683321:+_chr22:17688986|17689142:+_chr22:17702243|17702386:+_chr22:17726677|17735552:+_chr22:17738126|17738214:+_chr22:17739400|17739472:+","UN_BID_LS0005","BID","protein coding gene","no",2.82,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr22:17738017|17738229","exon_intersect_chr22:17739349|17741194"]
["chr22:19030852|19030960:-","chr22:18634861|18634960:-_chr22:19030402|19030852:-_chr22:19030960|19031229:-","UN_DGCR9_LS0040","DGCR9","lncRNA gene","no",6.39,0,0,0.003,32,0,0,"0(0)","KIRC","no","NA","NA","exon_intersect_chr22:19030782|19031242","exon_intersect_chr22:19030782|19031242"]
["chr22:19756853|19757195:-","chr22:19752490|19755756:-_chr22:19756444|19756508:-_chr22:19756640|19756853:-_chr22:19757195|19759469:-","UN_TBX1_LS0001","TBX1","protein coding gene","no",0.87,0,0,0.004,43,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr22:19756745|19759558","intron_intersect_chr22:19756745|19759558"]
["chr22:20588968|20591956:-","chr22:20587502|20587746:-_chr22:20587829|20587961:-_chr22:20588807|20588968:-_chr22:20591956|20592859:-_chr22:20593007|20593066:-_chr22:20597117|20597253:-_chr22:20602567|20602872:-_chr22:20603031|20603315:-_chr22:20603928|20604063:-_chr22:20604316|20604548:-_chr22:20604897|20605103:-_chr22:20605496|20605600:-_chr22:20606178|20606276:-_chr22:20606809|20607556:-_chr22:20607791|20613735:-_chr22:20621263|20621355:-_chr22:20621542|20621594:-_chr22:20621699|20621801:-_chr22:20621927|20622129:-_chr22:20622709|20622851:-_chr22:20623062|20623141:-_chr22:20626096|20626179:-_chr22:20627163|20627813:-_chr22:20638611|20639135:-","UN_CCDC74BP1_LS0002","CCDC74BP1","pseudogene","no",4.27,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr22:20591956|20592218","exon_intersect_chr22:20588807|20589026"]
["chr22:20623141|20626096:-","chr22:20596942|20597253:-_chr22:20602567|20602872:-_chr22:20603031|20603315:-_chr22:20603928|20604007:-_chr22:20604316|20604548:-_chr22:20604897|20605103:-_chr22:20605496|20605600:-_chr22:20606178|20606276:-_chr22:20606809|20606970:-_chr22:20607464|20607556:-_chr22:20607791|20608025:-_chr22:20613663|20613735:-_chr22:20621263|20621355:-_chr22:20621542|20621594:-_chr22:20621699|20621801:-_chr22:20621927|20622129:-_chr22:20622709|20622851:-_chr22:20623062|20623141:-_chr22:20626096|20626179:-_chr22:20627163|20627813:-_chr22:20638611|20638776:-_chr22:20638890|20639135:-","UN_SMPD4P1_LS0019","SMPD4P1","pseudogene","no",3.27,0,0,0.003,31,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr22:20626096|20626179","intron_intersect_chr22:20622851|20624099"]
["chr22:21628331|21628496:+","chr22:21628172|21628331:+_chr22:21628496|21628657:+","UN_YDJC_LS0002","YDJC","protein coding gene","no",1.7,0,0,0.003,24,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr22:21628089|21628787","exon_intersect_chr22:21628089|21628787"]
["chr22:22124182|22125957:+","chr22:22123986|22124182:+_chr22:22125957|22126137:+_chr22:22158262|22158638:+","UN_IGLV10-54_LS0023","IGLV10-54","no","no",9.16,0,0,0.019,183,0,0,"0(0)","ESCA;LUSC;STAD;UCS","no","NA","NA","NA","NA"]
["chr22:23457193|23460353:+","chr22:23456834|23457193:+_chr22:23460353|23460788:+","UN_AP000344.1_LS0002","AP000344.1","pseudogene","no",3.38,0,0,0.012,113,0,0,"0(0)","LAML;PCPG;THYM","no","NA","NA","intron_intersect_chr22:23446802|23458379","exon_intersect_chr22:23460349|23460833"]
["chr22:24008114|24008314:-","chr22:24006189|24006685:-_chr22:24006971|24007121:-_chr22:24008028|24008114:-_chr22:24008314|24009690:-","UN_GSTT4_UP_LS0001","GSTT4","protein coding gene","no",2.78,0,0,0.005,48,0,0,"0(0)","STAD","no","NA","NA","NA","intron_intersect_chr22:24007154|24008228"]
["chr22:24098192|24103037:+","chr22:24011418|24011728:+_chr22:24035444|24035520:+_chr22:24036089|24036181:+_chr22:24038348|24038461:+_chr22:24041139|24041273:+_chr22:24042904|24043084:+_chr22:24049091|24049220:+_chr22:24050825|24050974:+_chr22:24054873|24055159:+_chr22:24056192|24056360:+_chr22:24059227|24059363:+_chr22:24059924|24060141:+_chr22:24061947|24062025:+_chr22:24062959|24063146:+_chr22:24064035|24064187:+_chr22:24066987|24067181:+_chr22:24070800|24071042:+_chr22:24072354|24072510:+_chr22:24076169|24076284:+_chr22:24083228|24083389:+_chr22:24084579|24084785:+_chr22:24085006|24085151:+_chr22:24087452|24087713:+_chr22:24091583|24091843:+_chr22:24095931|24096082:+_chr22:24098014|24098192:+_chr22:24103037|24103285:+_chr22:24113566|24113748:+_chr22:24119367|24119606:+","UN_CABIN1_LS0067","CABIN1","protein coding gene","yes",2.13,0,0,0.006,56,0,0,"0(0)","GBM;TGCT","no","NA","NA","exon_intersect_chr22:24098014|24098282","exon_intersect_chr22:24103037|24103354"]
["chr22:25063193|25063291:+","chr22:25062989|25063193:+_chr22:25063291|25063558:+","UN_KIAA1671_LS0023","KIAA1671","protein coding gene","no",4.97,0,0,0.003,27,0,0,"0(0)","THYM","no","TE_intersect_:25063044|chr22|25063044|25063330|MER41D:ERV1:LTR|175|-","TE_intersect_:25063044|chr22|25063044|25063330|MER41D:ERV1:LTR|175|-","exon_intersect_chr22:25052122|25065241","exon_intersect_chr22:25052122|25065241"]
["chr22:25354954|25355569:+","chr22:25279722|25282206:+_chr22:25300715|25300791:+_chr22:25318260|25318375:+_chr22:25319042|25319137:+_chr22:25319767|25323087:+_chr22:25326653|25326773:+_chr22:25327562|25327738:+_chr22:25330087|25330148:+_chr22:25336133|25336200:+_chr22:25337272|25337293:+_chr22:25339890|25339975:+_chr22:25346214|25346308:+_chr22:25349573|25349775:+_chr22:25352396|25352515:+_chr22:25353963|25354146:+_chr22:25354620|25354954:+_chr22:25355569|25357374:+_chr22:25358963|25359830:+","UN_LRP5L_LS0009","LRP5L","protein coding gene","no",2.64,0,0,0.001,12,0,0,"0(0)","UVM","no","NA","TE_intersect_:25355397|chr22|25355397|25355694|AluJb:Alu:SINE|145|+","intron_intersect_chr22:25354812|25357255","intron_intersect_chr22:25354812|25357255"]
["chr22:26630252|26630340:+","chr22:26630062|26630252:+_chr22:26630340|26630649:+","UN_CRYBA4_LS0006","CRYBA4","protein coding gene","no",5.97,0,0,0.003,30,0,0,"0(0)","PRAD","no","TE_intersect_:26629854|chr22|26629854|26630255|L2b:L2:LINE|368|-","NA","intron_intersect_chr22:26628430|26630340","exon_intersect_chr22:26630340|26630672"]
["chr22:26773118|26773168:-","chr22:26772492|26773118:-_chr22:26773168|26773830:-","UN_MIATNB_LS0058","MIATNB","lncRNA gene","no",0.95,0,0,0.002,16,0,0,"0(0)","ESCA","no","TE_intersect_:26772170|chr22|26772170|26773828|SVA_F:SVA:Retroposon|82|-","TE_intersect_:26772170|chr22|26772170|26773828|SVA_F:SVA:Retroposon|82|-","intron_intersect_chr22:26742838|26774156","intron_intersect_chr22:26742838|26774156"]
["chr22:27689885|27694549:-","chr22:27666515|27670633:-_chr22:27675222|27675420:-_chr22:27675529|27676207:-_chr22:27676410|27676887:-_chr22:27677334|27677525:-_chr22:27689720|27689885:-_chr22:27694549|27694607:-_chr22:27695459|27695533:-_chr22:27697591|27697701:-_chr22:27706694|27706816:-_chr22:27714881|27714970:-","UN_AL121885.2_LS0004","AL121885.2","lncRNA gene","no",3.75,0,0,0.002,22,0,0,"0(0)","TGCT","no","NA","TE_intersect_:27689643|chr22|27689643|27689943|L1ME4b:L1:LINE|311|+","intron_intersect_chr22:27689885|27697591","intron_intersect_chr22:27689885|27697591"]
["chr22:28138601|28140134:+","chr22:28116691|28117026:+_chr22:28126681|28126747:+_chr22:28127758|28127870:+_chr22:28137413|28137506:+_chr22:28138502|28138601:+_chr22:28140134|28140820:+","UN_TTC28_LS0056","TTC28","protein coding gene","no",2.03,0,0,0.005,51,0,0,"0(0)","OV","no","NA","TE_intersect_:28140020|chr22|28140020|28140182|MIRc:MIR:SINE|279|+","intron_intersect_chr22:28108403|28163092","intron_intersect_chr22:28108403|28163092"]
["chr22:29297949|29298790:+","chr22:29268250|29268349:+_chr22:29272216|29272252:+_chr22:29272380|29272431:+_chr22:29278131|29278216:+_chr22:29282390|29282557:+_chr22:29286923|29287134:+_chr22:29288606|29288786:+_chr22:29291562|29291599:+_chr22:29292137|29292169:+_chr22:29292488|29292606:+_chr22:29296239|29296368:+_chr22:29297827|29297949:+_chr22:29298790|29298895:+_chr22:29299234|29299331:+_chr22:29299599|29299851:+_chr22:29300122|29300483:+","UN_EWSR1_LS0044","EWSR1","protein coding gene","yes",29.83,0,0,0.003,25,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr22:29297949|29298733","exon_intersect_chr22:29298733|29299851"]
["chr22:30292120|30292201:+","chr22:30291991|30292120:+_chr22:30292201|30292417:+","UN_TBC1D10A_LS0002","TBC1D10A","protein coding gene","no",1.11,0,0,0.003,25,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr22:30291990|30292851","exon_intersect_chr22:30291990|30292851"]
["chr22:31650778|31654531:-","chr22:31621054|31621142:-_chr22:31621334|31621472:-_chr22:31621649|31621885:-_chr22:31648101|31648276:-_chr22:31650699|31650778:-_chr22:31654531|31654607:-","UN_PISD_LS0055","PISD","protein coding gene","no",4.71,0,0,0.005,52,0,0,"0(0)","CHOL","no","TE_intersect_:31654362|chr22|31654362|31654561|L2a:L2:LINE|258|+","NA","intron_intersect_chr22:31650778|31662144","intron_intersect_chr22:31650778|31662144"]
["chr22:34629133|34638057:+","chr22:34555254|34555713:+_chr22:34628956|34629133:+_chr22:34638057|34638289:+_chr22:34641168|34641298:+_chr22:34754645|34754766:+_chr22:34761782|34761980:+_chr22:34764114|34764197:+_chr22:34764616|34764700:+_chr22:34767485|34768852:+","UN_AL021877.2_UP_LS0007","AL021877.2","lncRNA gene","no",2.61,0,0,0.004,34,0,0,"0(0)","THYM","no","TE_intersect_:34628942|chr22|34628942|34629292|L1PA15-16:L1:LINE|126|+","NA","NA","NA"]
["chr22:35232891|35250264:-","chr22:35232690|35232891:-_chr22:35250264|35250373:-_chr22:35257213|35257451:-","UN_LINC01399_UP_LS0002","LINC01399","pseudogene","no",2.97,0,0,0.031,294,0,0,"0(0)","CESC;GBM;LGG;OV;TGCT;UCS","no","TE_intersect_:35250193|chr22|35250193|35250626|MSTB:ERVL-MaLR:LTR|147|-","TE_intersect_:35232654|chr22|35232654|35233074|L1MC4:L1:LINE|246|-","NA","NA"]
["chr22:36285308|36387834:+","chr22:36281885|36282176:+_chr22:36282225|36282557:+_chr22:36285184|36285308:+_chr22:36387834|36387937:+","UN_MYH9_LS0294","MYH9","protein coding gene","yes",2.4,0,0,0.003,32,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr22:36285121|36285329","exon_intersect_chr22:36387807|36388018"]
["chr22:36888869|36889230:-","chr22:36887968|36888869:-_chr22:36889230|36889466:-","UN_NCF4-AS1_UP_LS0002","NCF4-AS1","lncRNA gene","no",4.02,0,0,0.006,56,0,0,"0(0)","UCS","no","TE_intersect_:36889043|chr22|36889043|36889236|L1ME3F:L1:LINE|269|+","TE_intersect_:36888675|chr22|36888675|36889043|MLT1A1:ERVL-MaLR:LTR|195|-","NA","NA"]
["chr22:37677003|37678517:-","chr22:37676862|37677003:-_chr22:37678517|37678660:-","UN_LGALS1_LS0015","LGALS1","protein coding gene","no",8.46,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr22:37678376|37678654","exon_intersect_chr22:37676856|37677228"]
["chr22:38076109|38077656:+","chr22:38057407|38057587:+_chr22:38057753|38057850:+_chr22:38059234|38059345:+_chr22:38065002|38065130:+_chr22:38067704|38067770:+_chr22:38069033|38069122:+_chr22:38070838|38070891:+_chr22:38071682|38071744:+_chr22:38072477|38072610:+_chr22:38073000|38073092:+_chr22:38073773|38073823:+_chr22:38074307|38074451:+_chr22:38074864|38075119:+_chr22:38076031|38076109:+_chr22:38077656|38077745:+_chr22:38078182|38078372:+","UN_AL022322.1_UP_LS0003","AL022322.1","lncRNA gene","no",2.73,0.02,0,0.01,95,0.001,1,"0(0)","OV","no","NA","NA","NA","NA"]
["chr22:38363813|38363906:-","chr22:38344532|38347585:-_chr22:38361399|38363813:-_chr22:38363906|38380423:-_chr22:38380937|38380990:-_chr22:38398780|38398873:-","UN_TPTEP2-CSNK1E_LS0073","TPTEP2-CSNK1E","protein coding gene","no",12.28,0,0,0.001,13,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr22:38363104|38368898","intron_intersect_chr22:38363104|38368898"]
["chr22:38807650|38807958:+","chr22:38806358|38807650:+_chr22:38807958|38808557:+","UN_AL022318.1_UP_LS0012","AL022318.1","lncRNA gene","no",3.04,0,0,0.002,16,0,0,"0(0)","ESCA","no","TE_intersect_:38806278|chr22|38806278|38808555|SVA_F:SVA:Retroposon|19|+","TE_intersect_:38806278|chr22|38806278|38808555|SVA_F:SVA:Retroposon|19|+","NA","NA"]
["chr22:39316820|39317532:+","chr22:39316708|39316820:+_chr22:39317532|39317847:+","UN_RPL3_LS0112","RPL3","protein coding gene","no",45.09,0,0,0.004,42,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr22:39316706|39317629","exon_intersect_chr22:39316706|39317629"]
["chr22:40301333|40312505:+","chr22:40265003|40267036:+_chr22:40273425|40273600:+_chr22:40277077|40277151:+_chr22:40277999|40278044:+_chr22:40279995|40281289:+_chr22:40285645|40285770:+_chr22:40300455|40300586:+_chr22:40300910|40301005:+_chr22:40301150|40301333:+_chr22:40312505|40312651:+_chr22:40312902|40312997:+_chr22:40315283|40316012:+_chr22:40321090|40321229:+_chr22:40322854|40335807:+","UN_TNRC6B_LS0046","TNRC6B","protein coding gene","no",4.47,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr22:40301150|40301495","exon_intersect_chr22:40312505|40312651"]
["chr22:41781394|41781598:+","chr22:41776111|41776267:+_chr22:41778689|41778877:+_chr22:41781284|41781394:+_chr22:41781598|41781845:+_chr22:41784339|41784420:+_chr22:41784608|41784783:+_chr22:41793829|41793910:+_chr22:41794294|41794477:+_chr22:41795411|41795542:+_chr22:41795735|41795847:+_chr22:41799254|41799454:+","UN_MEI1_LS0029","MEI1","protein coding gene","no",3.7,0,0,0.003,32,0,0,"0(0)","CESC","no","NA","NA","exon_intersect_chr22:41781284|41781845","exon_intersect_chr22:41781284|41781845"]
["chr22:41953378|41957672:+","chr22:41952174|41952421:+_chr22:41953239|41953378:+_chr22:41957672|41958933:+","UN_LINC00634_LS0007","LINC00634","pseudogene","no",2.74,0,0,0.03,283,0,0,"0(0)","GBM;LGG;PCPG","no","NA","NA","intron_intersect_chr22:41952421|41957670","exon_intersect_chr22:41957670|41958933"]
["chr22:42912157|42945282:-","chr22:42871128|42871469:-_chr22:42876137|42876333:-_chr22:42876888|42877010:-_chr22:42879048|42879169:-_chr22:42882184|42882304:-_chr22:42884386|42884561:-_chr22:42888643|42888798:-_chr22:42890947|42891182:-_chr22:42893457|42893613:-_chr22:42912021|42912157:-_chr22:42945282|42945966:-","UN_PACSIN2_LS0063","PACSIN2","protein coding gene","no",6.1,0,0,0.004,37,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr22:42912157|42945785","intron_intersect_chr22:42912157|42945785"]
["chr22:43835696|43835944:-","chr22:43835053|43835696:-_chr22:43835944|43836035:-_chr22:43838867|43838993:-_chr22:43839945|43840025:-_chr22:43841802|43841932:-_chr22:43862214|43862406:-","UN_SULT4A1_LS0016","SULT4A1","protein coding gene","no",1.73,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr22:43833734|43838867","intron_intersect_chr22:43833734|43838867"]
["chr22:45393841|45396346:-","chr22:45393514|45393841:-_chr22:45396346|45396486:-_chr22:45399095|45399341:-","SMC1B_LS019","SMC1B","protein coding gene","no",3.03,0,0,0.01,94,0,0,"0(0)","CESC","yes","NA","NA","exon_intersect_chr22:45396346|45396486","intron_intersect_chr22:45393841|45394685"]
["chr22:46762086|46762156:+","chr22:46761992|46762086:+_chr22:46762156|46762331:+","UN_AL118516.1_LS0001","AL118516.1","lncRNA gene","no",1.66,0,0,0.006,55,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr22:46761894|46762563","exon_intersect_chr22:46761894|46762563"]
["chr22:48136116|48142006:+","chr22:48135688|48136116:+_chr22:48142006|48142142:+_chr22:48142941|48143279:+","UN_MIR3201_UP_LS0001","MIR3201","small non-coding RNA gene","no",2.91,0,0,0.001,13,0,0,"0(0)","KICH","no","TE_intersect_:48135331|chr22|48135331|48136155|L1ME3E:L1:LINE|304|+","NA","NA","exon_intersect_chr22:48142006|48142044"]
["chr22:49373179|49374418:+","chr22:49372919|49373179:+_chr22:49374418|49374463:+_chr22:49376320|49377131:+","UN_AC207130.1_LS0001","AC207130.1","lncRNA gene","no",4.92,0,0,0.015,146,0,0,"0(0)","CHOL;SKCM","no","NA","TE_intersect_:49374256|chr22|49374256|49374700|L1MEc:L1:LINE|270|-","NA","NA"]
["chr22:49631961|49632089:+","chr22:49627051|49629099:+_chr22:49629133|49631961:+_chr22:49632089|49656627:+","UN_C22orf34_LS0066","C22orf34","lncRNA gene","no",9.7,0,0,0.002,23,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr22:49627047|49656624","intron_intersect_chr22:49627047|49656624"]
["chr22:50077502|50080344:-","chr22:50070542|50070583:-_chr22:50074216|50074332:-_chr22:50076841|50076912:-_chr22:50077401|50077502:-_chr22:50080344|50080397:-_chr22:50083084|50083173:-_chr22:50084726|50084961:-_chr22:50085355|50085902:-","UN_MLC1_LS0027","MLC1","protein coding gene","no",401.83,0,0,0.003,25,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr22:50080344|50080397","intron_intersect_chr22:50077502|50079918"]
["chr22:50527230|50527643:+","chr22:50526579|50527230:+_chr22:50527643|50527766:+","UN_TYMP_LS0032","TYMP","protein coding gene","no",5.36,0,0,0.013,124,0,0,"0(0)","BLCA;CESC;HNSC","no","NA","NA","exon_intersect_chr22:50527165|50527283","exon_intersect_chr22:50527588|50527717"]
["chr3:100400778|100400934:+","chr3:100400647|100400778:+_chr3:100400934|100401080:+","UN_TOMM70_LS0006","TOMM70","protein coding gene","no",0.93,0,0,0.007,65,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr3:100400626|100401398","exon_intersect_chr3:100400626|100401398"]
["chr3:10152722|10177034:-","chr3:10152220|10152722:-_chr3:10177034|10177078:-","UN_FANCD2OS_UP_LS0035","FANCD2OS","protein coding gene","no",3.13,0,0,0.007,71,0,0,"0(0)","OV","no","TE_intersect_:10176807|chr3|10176807|10177100|AluY:Alu:SINE|61|-","TE_intersect_:10152481|chr3|10152481|10152789|AluSc8:Alu:SINE|108|-","intron_intersect_chr3:10165048|10177838","NA"]
["chr3:104292240|104336132:-","chr3:104280759|104282031:-_chr3:104282868|104283116:-_chr3:104290419|104290501:-_chr3:104292106|104292240:-_chr3:104336132|104336356:-","UN_AC046144.1_UP_LS0011","AC046144.1","pseudogene","no",3.21,0,0,0.005,52,0,0,"0(0)","ESCA","no","TE_intersect_:104334843|chr3|104334843|104336153|L1MA9:L1:LINE|288|+","TE_intersect_:104292238|chr3|104292238|104292720|MER65A:ERV1:LTR|208|-","NA","NA"]
["chr3:107950659|107957838:+","chr3:107950366|107950659:+_chr3:107957838|107959195:+","UN_LINC01215_UP_LS0004","LINC01215","lncRNA gene","no",5.13,0,0,0.004,42,0,0,"0(0)","OV","no","TE_intersect_:107950216|chr3|107950216|107950752|MLT2B2:ERVL:LTR|142|+","NA","NA","NA"]
["chr3:109193539|109206645:-","chr3:109188501|109193539:-_chr3:109206645|109207493:-","UN_LINC00488_LS0005","LINC00488","lncRNA gene","no",2.9,0,0,0.006,56,0,0,"0(0)","SKCM","no","NA","TE_intersect_:109193536|chr3|109193536|109193656|MIR3:MIR:SINE|264|+","NA","NA"]
["chr3:110461357|110466788:+","chr3:110440119|110440183:+_chr3:110461310|110461357:+_chr3:110466788|110466899:+_chr3:110471359|110471586:+","UN_RF00019_UP_LS1364","RF00019","small non-coding RNA gene","no",3.66,0,0,0.048,464,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;STAD","no","NA","NA","NA","NA"]
["chr3:112075492|112078742:+","chr3:112075290|112075492:+_chr3:112078742|112078878:+_chr3:112086133|112086545:+_chr3:112093360|112093489:+_chr3:112102838|112102965:+_chr3:112109543|112109613:+_chr3:112112964|112113145:+_chr3:112116642|112118215:+","UN_TMPRSS7_LS0005","TMPRSS7","protein coding gene","no",1.79,0,0,0.001,12,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr3:112075492|112076876","exon_intersect_chr3:112078742|112078878"]
["chr3:112550262|112558376:-","chr3:112538146|112538180:-_chr3:112541803|112541884:-_chr3:112544057|112544106:-_chr3:112548533|112548640:-_chr3:112550192|112550262:-_chr3:112558376|112558417:-_chr3:112561457|112561916:-","UN_ATG3_LS0004","ATG3","protein coding gene","no",11.71,0,0,0.004,43,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr3:112558138|112558417","intron_intersect_chr3:112550262|112553280"]
["chr3:112664905|112665052:+","chr3:112664726|112664905:+_chr3:112665052|112665187:+_chr3:112909944|112910049:+_chr3:112926479|112926692:+","UN_AC092892.1_UP_LS0007","AC092892.1","lncRNA gene","no",1.26,0,0,0.009,86,0,0,"0(0)","ESCA;LUSC","no","TE_intersect_:112659127|chr3|112659127|112665164|L1PA3:L1:LINE|29|-","TE_intersect_:112659127|chr3|112659127|112665164|L1PA3:L1:LINE|29|-","NA","NA"]
["chr3:113224254|113226207:-","chr3:113223344|113224254:-_chr3:113226207|113226531:-","UN_BOC_LS0012","BOC","protein coding gene","yes",3.35,0,0,0.001,13,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr3:113216420|113249722","intron_intersect_chr3:113216420|113249722"]
["chr3:11544991|11554811:+","chr3:11544807|11544991:+_chr3:11554811|11555083:+","UN_ATG7_LS0053","ATG7","protein coding gene","no",6,0,0,0.014,136,0,0,"0(0)","BRCA;DLBC;SARC","no","TE_intersect_:11544831|chr3|11544831|11545187|L2b:L2:LINE|273|-","NA","intron_intersect_chr3:11529755|11554811","exon_intersect_chr3:11554811|11557665"]
["chr3:116354280|116367942:+","chr3:116208953|116209166:+_chr3:116354210|116354280:+_chr3:116367942|116368035:+_chr3:116368143|116368271:+_chr3:116369831|116370090:+","UN_LSAMP_LS0084","LSAMP","protein coding gene","yes",4.35,0,0,0.015,141,0,0,"0(0)","ESCA;PAAD;STAD","no","NA","NA","intron_intersect_chr3:116086561|116360024","exon_intersect_chr3:116367942|116368035"]
["chr3:119810398|119811539:+","chr3:119782035|119782300:+_chr3:119807229|119807447:+_chr3:119810061|119810398:+_chr3:119811539|119812960:+_chr3:119814979|119815121:+_chr3:119815323|119815439:+_chr3:119815726|119815831:+_chr3:119817068|119818484:+","UN_NR1I2_LS0012","NR1I2","protein coding gene","yes",1.9,0,0,0.003,28,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr3:119810061|119810552","exon_intersect_chr3:119811076|119811726"]
["chr3:121872788|121884992:+","chr3:121835277|121835391:+_chr3:121844453|121844547:+_chr3:121854687|121854823:+_chr3:121857011|121857156:+_chr3:121872537|121872788:+_chr3:121884992|121889640:+_chr3:121890566|121894581:+_chr3:121896406|121896493:+_chr3:121897388|121897529:+_chr3:121911574|121911666:+_chr3:121913021|121913120:+_chr3:121915227|121915317:+_chr3:121915616|121915693:+_chr3:121922220|121922302:+_chr3:121922775|121922861:+_chr3:121923040|121923129:+_chr3:121923222|121923266:+_chr3:121924351|121924383:+_chr3:121924945|121925033:+_chr3:121927758|121927839:+_chr3:121928421|121928538:+","UN_EAF2_LS0005","EAF2","protein coding gene","yes",4.8,0,0,0.001,13,0,0,"0(0)","LAML","no","NA","TE_intersect_:121884908|chr3|121884908|121885902|L2a:L2:LINE|286|+","intron_intersect_chr3:121872788|121872989","intron_intersect_chr3:121873163|121886342"]
["chr3:122572022|122572692:-","chr3:122571816|122572022:-_chr3:122572692|122572973:-","UN_DTX3L_LS0021","DTX3L","protein coding gene","no",1.89,0,0,0.006,59,0,0,"0(0)","ESCA;OV","no","TE_intersect_:122572592|chr3|122572592|122572874|AluSz:Alu:SINE|99|-","TE_intersect_:122571917|chr3|122571917|122572212|AluY:Alu:SINE|58|-","exon_intersect_chr3:122571678|122575203","exon_intersect_chr3:122571678|122575203"]
["chr3:124796638|124796708:+","chr3:124796341|124796487:+_chr3:124796548|124796638:+_chr3:124796708|124796797:+","UN_ITGB5_LS0069","ITGB5","protein coding gene","no",5.28,0,0,0.004,41,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr3:124796388|124796817","exon_intersect_chr3:124796388|124796817"]
["chr3:125929120|125929301:-","chr3:125928963|125929120:-_chr3:125929301|125929567:-_chr3:125930557|125930629:-_chr3:125931638|125931752:-_chr3:125932650|125932709:-_chr3:125933575|125933696:-_chr3:125936898|125936982:-_chr3:126331903|126331961:-","UN_FAM86JP_LS0026","FAM86JP","pseudogene","no",1.5,0,0,0.013,125,0,0,"0(0)","CESC;ESCA;LUSC","no","NA","NA","exon_intersect_chr3:125929275|125929567","exon_intersect_chr3:125928495|125930024"]
["chr3:127220833|127227072:-","chr3:127218943|127220833:-_chr3:127227072|127227259:-","UN_RF00019_UP_LS1391","RF00019","small non-coding RNA gene","no",2.37,0,0,0.006,59,0,0,"0(0)","KICH","no","NA","TE_intersect_:127220771|chr3|127220771|127221071|L1ME5:L1:LINE|306|+","NA","NA"]
["chr3:128456601|128457035:-","chr3:128452963|128456601:-_chr3:128457035|128457188:-","UN_AL449214.1_UP_LS0006","AL449214.1","lncRNA gene","no",4.08,0,0,0.003,24,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chr3:128945975|128962093:-","chr3:128909875|128910333:-_chr3:128915119|128915275:-_chr3:128915357|128915563:-_chr3:128916107|128916271:-_chr3:128932700|128932997:-_chr3:128935125|128935319:-_chr3:128945071|128945975:-_chr3:128962093|128965348:-","UN_KIAA1257_LS0038","KIAA1257","protein coding gene","no",2.58,0,0,0.004,38,0,0,"0(0)","TGCT","no","TE_intersect_:128960253|chr3|128960253|128963103|HERVH-int:ERV1:LTR|89|+","NA","intron_intersect_chr3:128945975|128965511","intron_intersect_chr3:128945975|128965511"]
["chr3:129334453|129338980:-","chr3:129333711|129334453:-_chr3:129338980|129339144:-","UN_NUP210P3_UP_LS0001","NUP210P3","pseudogene","no",1.77,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:129338485|chr3|129338485|129340852|SVA_D:SVA:Retroposon|82|-","TE_intersect_:129333696|chr3|129333696|129334519|L1M4b:L1:LINE|270|+","NA","NA"]
["chr3:129894131|129918400:+","chr3:129893882|129894131:+_chr3:129918400|129918574:+","UN_TMCC1-AS1_LS0004","TMCC1-AS1","lncRNA gene","no",1.99,0,0,0.003,27,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr3:129893927|129901707","exon_intersect_chr3:129918400|129918575"]
["chr3:130093022|130094148:-","chr3:130088870|130089255:-_chr3:130089360|130089478:-_chr3:130090702|130091120:-_chr3:130091777|130091867:-_chr3:130092953|130093022:-_chr3:130094148|130094291:-","UN_ALG1L2_LS0024","ALG1L2","protein coding gene","no",1.86,0,0,0.012,111,0,0,"0(0)","OV","no","NA","TE_intersect_:130092752|chr3|130092752|130093054|AluSx1:Alu:SINE|113|+","exon_intersect_chr3:130094148|130094304","intron_intersect_chr3:130092222|130093101"]
["chr3:130110279|130110896:+","chr3:130104295|130104562:+_chr3:130109234|130110279:+_chr3:130110896|130111266:+","UN_ALG1L2_LS0066","ALG1L2","protein coding gene","no",3.88,0,0,0.003,26,0,0,"0(0)","OV","no","TE_intersect_:130110191|chr3|130110191|130110434|MIR:MIR:SINE|260|-","NA","intron_intersect_chr3:130109233|130111279","intron_intersect_chr3:130109233|130111279"]
["chr3:132470629|132471031:-","chr3:132469527|132470629:-_chr3:132471031|132472105:-","UN_DNAJC13_LS0029","DNAJC13","protein coding gene","no",1.43,0,0,0.001,13,0,0,"0(0)","ESCA","no","TE_intersect_:132469994|chr3|132469994|132472250|SVA_F:SVA:Retroposon|95|-","TE_intersect_:132469994|chr3|132469994|132472250|SVA_F:SVA:Retroposon|95|-","intron_intersect_chr3:132467346|132473145","intron_intersect_chr3:132467346|132473145"]
["chr3:13354107|13357983:-","chr3:13316235|13317781:-_chr3:13319072|13319155:-_chr3:13319230|13319325:-_chr3:13319763|13319979:-_chr3:13321585|13321835:-_chr3:13322193|13322339:-_chr3:13323309|13323432:-_chr3:13325795|13325931:-_chr3:13327217|13327437:-_chr3:13328771|13328946:-_chr3:13330460|13330634:-_chr3:13332293|13332384:-_chr3:13335454|13335612:-_chr3:13336787|13336918:-_chr3:13337837|13337917:-_chr3:13339854|13340033:-_chr3:13340236|13340298:-_chr3:13341748|13341883:-_chr3:13341996|13342123:-_chr3:13343175|13343303:-_chr3:13344828|13351980:-_chr3:13352080|13352184:-_chr3:13353554|13353660:-_chr3:13353915|13354107:-_chr3:13357983|13358395:-_chr3:13360278|13360491:-_chr3:13365946|13366091:-_chr3:13371834|13372032:-_chr3:13373718|13373873:-_chr3:13375504|13375641:-_chr3:13376291|13376431:-_chr3:13377456|13377562:-_chr3:13378912|13378980:-_chr3:13379563|13379721:-_chr3:13386275|13386407:-_chr3:13388303|13388453:-_chr3:13391211|13391307:-_chr3:13397357|13397488:-_chr3:13399725|13399861:-_chr3:13420060|13420309:-","UN_NUP210_LS0069","NUP210","protein coding gene","no",0.5,0,0,0.002,16,0,0,"0(0)","LAML","no","TE_intersect_:13357961|chr3|13357961|13358101|MIRb:MIR:SINE|291|+","NA","intron_intersect_chr3:13354694|13358222","exon_intersect_chr3:13353915|13354694"]
["chr3:135658701|135673180:+","chr3:135658540|135658701:+_chr3:135673180|135673255:+_chr3:135675963|135676321:+","UN_AC092989.1_UP_LS0004","AC092989.1","pseudogene","no",2.77,0,0,0.014,135,0,0,"0(0)","ESCA;LUSC;OV","no","TE_intersect_:135658603|chr3|135658603|135664636|L1PA2:L1:LINE|19|+","NA","NA","NA"]
["chr3:138102304|138104583:+","chr3:138102085|138102304:+_chr3:138104583|138110107:+","UN_DZIP1L_LS0028","DZIP1L","protein coding gene","no",4.12,0,0,0.003,24,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr3:138101478|138102917","intron_intersect_chr3:138104052|138112364"]
["chr3:141011733|141013181:-","chr3:141009780|141011733:-_chr3:141013181|141013582:-","UN_AC121333.1_UP_LS0003","AC121333.1","lncRNA gene","no",2.6,0,0,0.032,309,0,0,"0(0)","OV;SARC;STAD","no","TE_intersect_:141013024|chr3|141013024|141013229|MIRb:MIR:SINE|259|+","TE_intersect_:141011657|chr3|141011657|141012378|MER20B:hAT-Charlie:DNA|275|+","NA","NA"]
["chr3:141463852|141475998:+","chr3:141463677|141463852:+_chr3:141475998|141476380:+","UN_RASA2_UP_LS0002","RASA2","protein coding gene","no",1.95,0,0,0.011,102,0,0,"0(0)","SKCM","no","NA","NA","NA","NA"]
["chr3:143432770|143433735:+","chr3:143432674|143432770:+_chr3:143433735|143433825:+_chr3:143654696|143654790:+_chr3:143657587|143657751:+","UN_SLC9A9_LS0010","SLC9A9","protein coding gene","no",2.74,0,0,0.003,33,0,0,"0(0)","LUAD","no","TE_intersect_:143432639|chr3|143432639|143432925|AluSc:Alu:SINE|115|-","TE_intersect_:143433722|chr3|143433722|143433759|OldhAT1:hAT-Ac:DNA|135|+","intron_intersect_chr3:143382161|143467037","intron_intersect_chr3:143382161|143467037"]
["chr3:146395921|146411393:-","chr3:146391403|146391562:-_chr3:146395760|146395921:-_chr3:146411393|146411741:-","UN_PLSCR2_LS0001","PLSCR2","protein coding gene","no",7.83,0,0,0.003,29,0,0,"0(0)","TGCT","no","TE_intersect_:146408411|chr3|146408411|146411603|HERVS71-int:ERV1:LTR|114|-","NA","intron_intersect_chr3:146401576|146415125","intron_intersect_chr3:146395921|146398657"]
["chr3:147689079|147732302:-","chr3:147688945|147689079:-_chr3:147732302|147732419:-","UN_NPM1P28_UP_LS0002","NPM1P28","pseudogene","no",6.08,0,0,0.004,36,0,0,"0(0)","TGCT;UCS","no","NA","TE_intersect_:147688914|chr3|147688914|147689273|MLT1A0:ERVL-MaLR:LTR|210|-","NA","NA"]
["chr3:148398776|148399777:+","chr3:148280901|148281109:+_chr3:148288935|148289043:+_chr3:148312111|148312252:+_chr3:148362198|148362301:+_chr3:148398679|148398776:+_chr3:148399777|148401203:+","UN_LINC02046_LS0011","LINC02046","lncRNA gene","no",4.07,0,0,0.012,112,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr3:148362301|148399777","exon_intersect_chr3:148399777|148399956"]
["chr3:150125030|150129970:+","chr3:150098032|150098150:+_chr3:150124938|150125030:+_chr3:150129970|150130104:+_chr3:150134113|150134184:+_chr3:150215665|150215900:+_chr3:150238935|150238998:+_chr3:150239880|150240203:+","UN_AC117386.2_LS0003","AC117386.2","lncRNA gene","no",2.27,0,0,0.001,12,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr3:150125030|150150511","intron_intersect_chr3:150125030|150150511"]
["chr3:150783705|150843140:+","chr3:150761942|150761980:+_chr3:150762339|150762407:+_chr3:150783653|150783705:+_chr3:150843140|150843392:+","UN_CLRN1-AS1_UP_LS0006","CLRN1-AS1","lncRNA gene","no",2.94,0,0,0.01,92,0,0,"0(0)","OV","no","TE_intersect_:150783633|chr3|150783633|150783780|MIRb:MIR:SINE|310|-","TE_intersect_:150842786|chr3|150842786|150843308|MER4-int:ERV1:LTR|131|+","NA","NA"]
["chr3:152097460|152097894:+","chr3:152097360|152097460:+_chr3:152097894|152098287:+","UN_MBNL1_UP_LS0006","MBNL1","protein coding gene","no",2.48,0,0,0.002,20,0,0,"0(0)","SARC","no","NA","TE_intersect_:152097722|chr3|152097722|152098170|MLT1C:ERVL-MaLR:LTR|213|+","NA","NA"]
["chr3:154030379|154121072:-","chr3:154024400|154026642:-_chr3:154030277|154030379:-_chr3:154121072|154121263:-","UN_ARHGEF26-AS1_LS0011","ARHGEF26-AS1","lncRNA gene","no",1.32,0,0,0.005,52,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr3:154121072|154121332","exon_intersect_chr3:154030277|154031519"]
["chr3:157148589|157149485:-","chr3:157148121|157148589:-_chr3:157149485|157149596:-_chr3:157149836|157149977:-_chr3:157150065|157150169:-_chr3:157150282|157150629:-","CCNL1_LS003","CCNL1","protein coding gene","yes",7.03,0,0,0.005,45,0,0,"0(0)","GBM;LGG","yes","NA","NA","exon_intersect_chr3:157149444|157154666","intron_intersect_chr3:157148589|157148949"]
["chr3:160068802|160100380:+","chr3:160068652|160068802:+_chr3:160100380|160100465:+_chr3:160113974|160123099:+","UN_IL12A-AS1_LS0021","IL12A-AS1","lncRNA gene","no",2.8,0,0,0.005,46,0,0,"0(0)","TGCT","no","TE_intersect_:160068567|chr3|160068567|160068860|MLT1A0:ERVL-MaLR:LTR|209|+","NA","intron_intersect_chr3:160031423|160100850","intron_intersect_chr3:160031423|160100850"]
["chr3:161600729|161763101:+","chr3:161600630|161600729:+_chr3:161763101|161764127:+","UN_AC128716.1_UP_LS0012","AC128716.1","pseudogene","no",2.37,0,0,0.004,36,0,0,"0(0)","LUAD","no","TE_intersect_:161600618|chr3|161600618|161600797|MER5A:hAT-Charlie:DNA|224|+","TE_intersect_:161762926|chr3|161762926|161763114|Ricksha_0:MULE-MuDR:DNA|168|-","NA","NA"]
["chr3:162112085|162151633:-","chr3:162109365|162112085:-_chr3:162151633|162151745:-_chr3:162152856|162152966:-_chr3:162157324|162157516:-_chr3:162161781|162161873:-_chr3:162175526|162175608:-_chr3:162194656|162194772:-_chr3:162289906|162289962:-","UN_AC131211.1_UP_LS0002","AC131211.1","lncRNA gene","no",3.51,0,0,0.003,30,0,0,"0(0)","UCS","no","TE_intersect_:162151147|chr3|162151147|162151680|L1PA17:L1:LINE|186|-","NA","NA","NA"]
["chr3:165528873|165572676:-","chr3:165480060|165481526:-_chr3:165486130|165486173:-_chr3:165502147|165502258:-_chr3:165503225|165503334:-_chr3:165508812|165508944:-_chr3:165528423|165528526:-_chr3:165528848|165528873:-_chr3:165572676|165572804:-","UN_LINC01322_LS0094","LINC01322","lncRNA gene","no",2.32,0,0,0.061,587,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;OV;STAD;THYM","no","TE_intersect_:165572331|chr3|165572331|165578354|L1PA3:L1:LINE|30|+","NA","intron_intersect_chr3:165549149|165580859","intron_intersect_chr3:165491266|165548838"]
["chr3:167522484|167531115:-","chr3:167442067|167442185:-_chr3:167446392|167446481:-_chr3:167449316|167449402:-_chr3:167452936|167465398:-_chr3:167465479|167465673:-_chr3:167467055|167467285:-_chr3:167471588|167471844:-_chr3:167473737|167473827:-_chr3:167474003|167478996:-_chr3:167500153|167500299:-_chr3:167505307|167505416:-_chr3:167522315|167522484:-_chr3:167531115|167531279:-_chr3:167532879|167532977:-_chr3:167536870|167537000:-_chr3:167554683|167554798:-_chr3:167560064|167560228:-_chr3:167566830|167566894:-_chr3:167575918|167576151:-_chr3:167602127|167602275:-_chr3:167604301|167604468:-_chr3:167620429|167620557:-","UN_WDR49_LS0003","WDR49","protein coding gene","no",1.85,0,0,0.004,39,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr3:167531115|167531279","intron_intersect_chr3:167522484|167527820"]
["chr3:169822941|169832987:+","chr3:169821922|169822941:+_chr3:169832987|169839182:+","UN_LRRIQ4_LS0003","LRRIQ4","protein coding gene","no",2.67,0,0,0.011,103,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr3:169822941|169828759","exon_intersect_chr3:169832987|169833183"]
["chr3:170714067|170740379:-","chr3:170708778|170708883:-_chr3:170710262|170710374:-_chr3:170713903|170714067:-_chr3:170740379|170740493:-","UN_AC026316.5_LS0056","AC026316.5","protein coding gene","no",3.07,0,0,0.003,33,0,0,"0(0)","GBM","no","TE_intersect_:170740312|chr3|170740312|170740705|MLT1B:ERVL-MaLR:LTR|180|-","NA","exon_intersect_chr3:170740351|170740533","intron_intersect_chr3:170708194|170725560"]
["chr3:170817965|170823208:-","chr3:170817551|170817965:-_chr3:170823208|170823459:-","UN_AC026316.5_LS0069","AC026316.5","protein coding gene","no",8.36,0,0,0.004,34,0,0,"0(0)","TGCT","no","TE_intersect_:170819276|chr3|170819276|170823353|HERVH-int:ERV1:LTR|96|-","TE_intersect_:170817614|chr3|170817614|170818016|LTR7:ERV1:LTR|88|-","intron_intersect_chr3:170755208|170859983","intron_intersect_chr3:170755208|170859983"]
["chr3:171461357|171468084:+","chr3:171460612|171461357:+_chr3:171468084|171468255:+_chr3:171469577|171469633:+","UN_AC092919.1_UP_LS0003","AC092919.1","lncRNA gene","no",2.98,0,0,0.016,153,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr3:171460612|171462256","exon_intersect_chr3:171468084|171468255"]
["chr3:174859450|174886933:+","chr3:174859322|174859450:+_chr3:174886933|174886977:+_chr3:174889367|174897948:+","UN_NAALADL2_LS0023","NAALADL2","protein coding gene","no",4.31,0,0,0.005,49,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr3:174859450|174863816","intron_intersect_chr3:174864090|175059361"]
["chr3:175416118|175432884:-","chr3:175399016|175400458:-_chr3:175410477|175410593:-_chr3:175415998|175416118:-_chr3:175432884|175433151:-","UN_NAALADL2_LS0084","NAALADL2","protein coding gene","no",4.26,0,0,0.025,244,0,0,"0(0)","CHOL;GBM;LGG","no","NA","TE_intersect_:175415835|chr3|175415835|175416146|AluJo:Alu:SINE|196|+","intron_intersect_chr3:175397348|175447229","intron_intersect_chr3:175397348|175447229"]
["chr3:177021248|177021309:+","chr3:177021017|177021248:+_chr3:177021309|177021579:+","UN_TBL1XR1_LS0006","TBL1XR1","protein coding gene","no",5.31,0,0,0.005,52,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr3:177019355|177025524","exon_intersect_chr3:177019355|177025524"]
["chr3:177737159|177787801:-","chr3:177736810|177737159:-_chr3:177787801|177787882:-_chr3:177790272|177790357:-","UN_AC026355.3_UP_LS0001","AC026355.3","pseudogene","no",7.69,0,0,0.006,56,0,0,"0(0)","PCPG","no","NA","NA","NA","intron_intersect_chr3:177701072|177751911"]
["chr3:179250934|179251396:-","chr3:179242771|179243284:-_chr3:179244495|179244693:-_chr3:179250743|179250934:-_chr3:179251396|179251615:-","KCNMB3_LS007","KCNMB3","protein coding gene","no",1.11,0.01,0,0.01,99,0.001,1,"0(0)","ESCA;OV","yes","NA","NA","exon_intersect_chr3:179250743|179251630","exon_intersect_chr3:179250743|179251630"]
["chr3:179719380|179719940:+","chr3:179719343|179719380:+_chr3:179719940|179720034:+_chr3:179721402|179721589:+_chr3:179730189|179730260:+_chr3:179730616|179730709:+_chr3:179740247|179740372:+_chr3:179742197|179742350:+_chr3:179745043|179745217:+_chr3:179752285|179752373:+_chr3:179754732|179754854:+_chr3:179757052|179757078:+_chr3:179761112|179761255:+_chr3:179764002|179764168:+_chr3:179765695|179765848:+_chr3:179781739|179781823:+_chr3:179784048|179789389:+","UN_USP13_LS0018","USP13","protein coding gene","no",1.98,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr3:179708957|179719940","exon_intersect_chr3:179719940|179720034"]
["chr3:180302486|180304808:+","chr3:180300376|180300685:+_chr3:180301573|180301658:+_chr3:180302400|180302486:+_chr3:180304808|180305346:+","UN_AC068760.1_UP_LS0007","AC068760.1","pseudogene","no",2.3,0,0,0.004,39,0,0,"0(0)","BRCA","no","NA","NA","NA","NA"]
["chr3:181088917|181117029:+","chr3:180989783|180989840:+_chr3:181056697|181056786:+_chr3:181088877|181088917:+_chr3:181117029|181117412:+","SOX2-OT_LS011","SOX2-OT","lncRNA gene","no",2.25,0,0,0.003,32,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chr3:181088917|181146233","intron_intersect_chr3:181088917|181146233"]
["chr3:182226469|182229600:-","chr3:182221083|182226469:-_chr3:182229600|182229671:-_chr3:182232231|182232302:-_chr3:182234096|182234215:-_chr3:182234972|182235014:-_chr3:182261055|182261152:-_chr3:182295793|182295850:-_chr3:182324158|182324294:-_chr3:182347660|182347781:-_chr3:182387076|182387138:-_chr3:182426436|182426535:-","UN_AC007547.1_UP_LS0020","AC007547.1","pseudogene","no",4.29,0,0,0.009,90,0,0,"0(0)","ESCA;LUSC","no","TE_intersect_:182229327|chr3|182229327|182230273|Tigger1:TcMar-Tigger:DNA|128|-","NA","NA","NA"]
["chr3:182588680|182617512:-","chr3:182588105|182588680:-_chr3:182617512|182617597:-_chr3:182620383|182620550:-","UN_LINC01995_UP_LS0007","LINC01995","lncRNA gene","no",3.25,0,0,0.007,68,0,0,"0(0)","ESCA;LUSC","no","NA","TE_intersect_:182588630|chr3|182588630|182589458|L1MB7:L1:LINE|211|+","NA","NA"]
["chr3:183250865|183252535:+","chr3:183249486|183249570:+_chr3:183250784|183250865:+_chr3:183252535|183253472:+_chr3:183269498|183273413:+","UN_MCF2L2_LS0015","MCF2L2","protein coding gene","no",2.39,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","TE_intersect_:183252521|chr3|183252521|183252648|FLAM_C:Alu:SINE|118|-","intron_intersect_chr3:183231212|183253244","intron_intersect_chr3:183231212|183253244"]
["chr3:184150108|184150259:+","chr3:184149704|184150108:+_chr3:184150259|184150435:+","UN_AC131235.1_LS0005","AC131235.1","pseudogene","no",4.34,0,0,0.013,126,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","exon_intersect_chr3:184149704|184150435","exon_intersect_chr3:184149704|184150435"]
["chr3:184711667|184711834:+","chr3:184711474|184711667:+_chr3:184711834|184712071:+","UN_MAGEF1_LS0018","MAGEF1","protein coding gene","no",1.18,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr3:184710367|184712002","exon_intersect_chr3:184710367|184712002"]
["chr3:185926714|185937825:-","chr3:185917330|185917725:-_chr3:185918365|185918438:-_chr3:185919437|185919496:-_chr3:185921104|185921187:-_chr3:185922011|185922126:-_chr3:185923796|185923984:-_chr3:185925464|185925626:-_chr3:185926601|185926714:-_chr3:185937825|185937987:-","TRA2B_LS017","TRA2B","protein coding gene","no",7.89,0,0,0.002,20,0,0,"0(0)","GBM","yes","NA","NA","exon_intersect_chr3:185937825|185938136","exon_intersect_chr3:185926601|185929073"]
["chr3:187243621|187246897:-","chr3:187234084|187236567:-_chr3:187243484|187243621:-_chr3:187246897|187247385:-_chr3:187250251|187250329:-_chr3:187251634|187251752:-_chr3:187253168|187253315:-_chr3:187256664|187256860:-_chr3:187260741|187260872:-_chr3:187262543|187262720:-_chr3:187285825|187286008:-","UN_MASP1_LS0010","MASP1","protein coding gene","no",9.28,0,0,0.004,35,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chr3:187246361|187247385","exon_intersect_chr3:187241481|187244976"]
["chr3:187577069|187647272:+","chr3:187517015|187517236:+_chr3:187528647|187528775:+_chr3:187576949|187577069:+_chr3:187647272|187647742:+","UN_AC072022.1_UP_LS0046","AC072022.1","lncRNA gene","no",2.87,0,0,0.014,133,0,0,"0(0)","KICH;KIRC","no","NA","NA","NA","NA"]
["chr3:187834481|187877007:-","chr3:187832543|187834481:-_chr3:187877007|187877122:-_chr3:187890214|187890395:-","UN_BCL6_UP_LS0031","BCL6","protein coding gene","yes",3.34,0,0,0.004,34,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr3:189138562|189184942:-","chr3:189134948|189137190:-_chr3:189138440|189138562:-_chr3:189184942|189185015:-_chr3:189229146|189229520:-","UN_TPRG1_LS0098","TPRG1","protein coding gene","no",6.07,0,0,0.003,25,0,0,"0(0)","BLCA","no","NA","TE_intersect_:189138372|chr3|189138372|189138723|MLT1J2:ERVL-MaLR:LTR|279|-","intron_intersect_chr3:189172131|189207374","intron_intersect_chr3:189132697|189147584"]
["chr3:190010098|190013741:+","chr3:190005684|190005830:+_chr3:190006299|190006421:+_chr3:190009955|190010098:+_chr3:190013741|190013888:+_chr3:190025666|190026717:+","UN_P3H2_LS0034","P3H2","protein coding gene","no",7.48,0,0,0.004,41,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr3:189995442|190116580","intron_intersect_chr3:189995442|190116580"]
["chr3:19078934|19126386:+","chr3:18963361|18963573:+_chr3:18966293|18966407:+_chr3:19075965|19076080:+_chr3:19078883|19078934:+_chr3:19126386|19126466:+_chr3:19127013|19127142:+_chr3:19143051|19143147:+_chr3:19145048|19145903:+","UN_KCNH8_UP_LS0025","KCNH8","protein coding gene","no",2.38,0,0,0.01,95,0,0,"0(0)","ESCA;OV;THYM","no","NA","TE_intersect_:19126365|chr3|19126365|19126617|LTR16C:ERVL:LTR|270|-","NA","NA"]
["chr3:191857669|191889121:-","chr3:191854475|191854861:-_chr3:191857534|191857669:-_chr3:191889121|191889186:-_chr3:191892966|191893125:-_chr3:191898557|191898746:-_chr3:191900554|191900792:-","UN_UTS2B_UP_LS0006","UTS2B","protein coding gene","no",21.26,0,0,0.001,12,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr3:194273910|194274092:-","chr3:194273172|194273910:-_chr3:194274092|194275622:-","UN_LINC02036_UP_LS0005","LINC02036","lncRNA gene","no",3.2,0,0,0.003,33,0,0,"0(0)","ACC","no","NA","NA","NA","NA"]
["chr3:194527243|194527346:-","chr3:194521511|194521550:-_chr3:194525149|194525226:-_chr3:194527131|194527243:-_chr3:194527346|194527417:-","UN_AC108676.1_UP_LS0014","AC108676.1","lncRNA gene","no",1.39,0,0,0.006,57,0,0,"0(0)","CHOL","no","NA","NA","NA","NA"]
["chr3:195618827|195721005:+","chr3:195614947|195615020:+_chr3:195618628|195618827:+_chr3:195721005|195721083:+_chr3:195724680|195725030:+","UN_KIF3AP1_UP_LS0013","KIF3AP1","pseudogene","no",6.12,0,0,0.002,23,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr3:195618628|195620233","exon_intersect_chr3:195720882|195721083"]
["chr3:195788089|195788618:-","chr3:195747173|195747380:-_chr3:195748902|195749064:-_chr3:195750889|195751112:-_chr3:195751207|195751271:-_chr3:195752373|195752446:-_chr3:195753051|195753230:-_chr3:195754213|195754372:-_chr3:195757147|195757328:-_chr3:195759124|195759261:-_chr3:195760884|195761117:-_chr3:195761484|195761585:-_chr3:195762087|195762254:-_chr3:195762855|195762945:-_chr3:195763433|195763641:-_chr3:195764045|195764164:-_chr3:195764997|195765122:-_chr3:195765270|195765449:-_chr3:195766663|195766751:-_chr3:195769022|195769152:-_chr3:195770216|195770371:-_chr3:195771652|195771816:-_chr3:195774172|195774305:-_chr3:195778303|195778455:-_chr3:195778790|195779401:-_chr3:195779450|195779593:-_chr3:195780890|195781177:-_chr3:195784490|195784585:-_chr3:195784730|195785305:-_chr3:195785930|195787465:-_chr3:195787658|195788089:-_chr3:195788618|195791497:-_chr3:195811736|195811857:-","MUC4_LS414","MUC4","protein coding gene","yes",1.99,0,0,0.003,27,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chr3:195778790|195791497","exon_intersect_chr3:195778790|195791497"]
["chr3:196159994|196160151:+","chr3:196142636|196143409:+_chr3:196143906|196144377:+_chr3:196159900|196159994:+_chr3:196160151|196160890:+","UN_LINC00885_LS0019","LINC00885","lncRNA gene","no",1.65,0,0,0.012,113,0,0,"0(0)","BLCA;DLBC;ESCA;LUSC","no","NA","NA","exon_intersect_chr3:196159900|196160890","exon_intersect_chr3:196159900|196160890"]
["chr3:196829176|196829293:-","chr3:196828974|196829176:-_chr3:196829293|196829326:-","UN_PAK2_LS0023","PAK2","protein coding gene","no",5.96,0,0,0.005,48,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr3:196828319|196832647","exon_intersect_chr3:196828319|196832647"]
["chr3:19700985|19876082:-","chr3:19477257|19484734:-_chr3:19615975|19616053:-_chr3:19700928|19700985:-_chr3:19876082|19876499:-","UN_MIR4791_UP_LS0013","MIR4791","small non-coding RNA gene","no",3.65,0,0,0.006,53,0,0,"0(0)","TGCT","no","TE_intersect_:19875426|chr3|19875426|19876112|HERV17-int:ERV1:LTR|115|-","TE_intersect_:19700714|chr3|19700714|19701164|LTR85a:Gypsy?:LTR|309|-","NA","NA"]
["chr3:197950221|197951159:+","chr3:197950206|197950221:+_chr3:197951159|197951311:+_chr3:197954003|197954120:+","UN_IQCG_LS0073","IQCG","protein coding gene","no",36.14,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr3:197949987|197950299","exon_intersect_chr3:197951159|197951665"]
["chr3:198214967|198215061:+","chr3:198195972|198196115:+_chr3:198198946|198199010:+_chr3:198205702|198205845:+_chr3:198208264|198214967:+_chr3:198215061|198215293:+_chr3:198216072|198216262:+_chr3:198218324|198218381:+_chr3:198218475|198219543:+","UN_FAM157A_LS0046","FAM157A","pseudogene","no",5.16,0,0,0.006,59,0,0,"0(0)","ESCA","no","TE_intersect_:198214629|chr3|198214629|198215049|MER1A:hAT-Charlie:DNA|141|+","NA","NA","NA"]
["chr3:21645764|21646328:+","chr3:21645501|21645764:+_chr3:21646328|21646471:+_chr3:21657437|21658045:+","UN_ZNF385D_LS0019","ZNF385D","protein coding gene","no",1.75,0.04,0,0.003,27,0.001,1,"0(0)","SARC","no","NA","TE_intersect_:21646263|chr3|21646263|21646471|MIRb:MIR:SINE|297|-","intron_intersect_chr3:21621568|21664886","intron_intersect_chr3:21621568|21664886"]
["chr3:24547251|24680316:+","chr3:24533276|24533350:+_chr3:24533631|24533975:+_chr3:24547192|24547251:+_chr3:24680316|24687141:+","UN_THRB-AS1_LS0022","THRB-AS1","lncRNA gene","no",4.88,0,0,0.002,17,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr3:24547251|24555834","exon_intersect_chr3:24680316|24681711"]
["chr3:26713779|26715373:+","chr3:26623700|26624052:+_chr3:26709513|26712748:+_chr3:26713225|26713779:+_chr3:26715373|26717596:+","LRRC3B_LS009","LRRC3B","protein coding gene","yes",2.34,0,0,0.012,113,0,0,"0(0)","GBM;LGG;OV","yes","NA","NA","NA","NA"]
["chr3:28574012|28575353:-","chr3:28556949|28557738:-_chr3:28573960|28574012:-_chr3:28575353|28575789:-","UN_AC098650.1_LS0015","AC098650.1","protein coding gene","no",1.44,0,0,0.009,84,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chr3:28574791|28575375","NA"]
["chr3:30956252|31004435:-","chr3:30952359|30952518:-_chr3:30956146|30956252:-_chr3:31004435|31004549:-","UN_GADL1_UP_LS0010","GADL1","protein coding gene","no",6.45,0,0,0.003,31,0,0,"0(0)","PCPG","no","TE_intersect_:31004363|chr3|31004363|31004856|MLT1G1:ERVL-MaLR:LTR|297|-","TE_intersect_:30956139|chr3|30956139|30956311|MER5A1:hAT-Charlie:DNA|236|+","NA","NA"]
["chr3:32974686|32992590:-","chr3:32961102|32961621:-_chr3:32974539|32974686:-_chr3:32992590|32992697:-","UN_CNOT10-AS1_UP_LS0013","CNOT10-AS1","lncRNA gene","no",1.76,0,0,0.003,33,0,0,"0(0)","DLBC","no","TE_intersect_:32992461|chr3|32992461|32992676|MIRb:MIR:SINE|363|-","TE_intersect_:32974517|chr3|32974517|32974981|MLT2B4:ERVL:LTR|184|-","NA","NA"]
["chr3:34189436|34268322:+","chr3:34184741|34184814:+_chr3:34189300|34189436:+_chr3:34268322|34269855:+","UN_LINC01811_LS0022","LINC01811","lncRNA gene","no",3.18,0,0,0.013,122,0,0,"0(0)","COAD;READ","no","TE_intersect_:34189047|chr3|34189047|34189461|LTR16A:ERVL:LTR|283|-","TE_intersect_:34267853|chr3|34267853|34268751|HAL1ME:L1:LINE|285|+","intron_intersect_chr3:34170920|34203244","exon_intersect_chr3:34268322|34268811"]
["chr3:35743965|35774944:+","chr3:35739121|35739577:+_chr3:35743839|35743965:+_chr3:35774944|35775017:+_chr3:35792382|35792530:+_chr3:35793701|35794388:+","UN_ARPP21_LS0021","ARPP21","protein coding gene","no",3.65,0,0,0.002,22,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr3:35743965|35744476","exon_intersect_chr3:35774792|35775017"]
["chr3:39227762|39258602:+","chr3:39227077|39227762:+_chr3:39258602|39259526:+","UN_AC092053.1_UP_LS0003","AC092053.1","pseudogene","no",3.38,0,0,0.007,67,0,0,"0(0)","ESCA;TGCT","no","TE_intersect_:39227088|chr3|39227088|39228593|SVA_D:SVA:Retroposon|21|+","NA","NA","NA"]
["chr3:39227924|39227971:+","chr3:39227081|39227647:+_chr3:39227763|39227924:+_chr3:39227971|39228623:+","UN_AC092053.1_UP_LS0005","AC092053.1","pseudogene","no",1.55,0,0,0.002,23,0,0,"0(0)","ESCA","no","TE_intersect_:39227088|chr3|39227088|39228593|SVA_D:SVA:Retroposon|21|+","TE_intersect_:39227088|chr3|39227088|39228593|SVA_D:SVA:Retroposon|21|+","NA","NA"]
["chr3:3968881|3971292:+","chr3:3968583|3968881:+_chr3:3971292|3971489:+","UN_SUMF1_LS0045","SUMF1","protein coding gene","no",1.44,0,0,0.004,43,0,0,"0(0)","ESCA","no","TE_intersect_:3963076|chr3|3963076|3969110|L1HS:L1:LINE|7|+","TE_intersect_:3971217|chr3|3971217|3971504|L1PA3:L1:LINE|42|+","intron_intersect_chr3:3847703|3981981","intron_intersect_chr3:3847703|3981981"]
["chr3:40525864|40528206:+","chr3:40524898|40525274:+_chr3:40525779|40525864:+_chr3:40528206|40528245:+_chr3:40529319|40529445:+_chr3:40530209|40530316:+_chr3:40532030|40539528:+","UN_ZNF621_LS0001","ZNF621","protein coding gene","no",2.69,0,0,0.018,176,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:40527845|chr3|40527845|40529005|L1MC1:L1:LINE|163|-","intron_intersect_chr3:40525864|40529288","intron_intersect_chr3:40525864|40529288"]
["chr3:42798530|42798707:+","chr3:42796933|42798125:+_chr3:42798353|42798530:+_chr3:42798707|42798806:+","UN_AC006059.2_LS0033","AC006059.2","protein coding gene","no",1.32,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:42798134|chr3|42798134|42799307|SVA_F:SVA:Retroposon|55|+","TE_intersect_:42798134|chr3|42798134|42799307|SVA_F:SVA:Retroposon|55|+","intron_intersect_chr3:42794299|42804172","intron_intersect_chr3:42794299|42804172"]
["chr3:44754368|44756418:-","chr3:44748744|44753552:-_chr3:44754224|44754368:-_chr3:44756418|44756464:-","UN_KIAA1143_LS0017","KIAA1143","protein coding gene","no",2.54,0,0,0.01,99,0,0,"0(0)","TGCT","no","TE_intersect_:44756278|chr3|44756278|44756575|AluSx1:Alu:SINE|131|+","NA","intron_intersect_chr3:44754368|44761495","intron_intersect_chr3:44754368|44761495"]
["chr3:46546549|46557035:+","chr3:46545848|46546549:+_chr3:46557035|46557431:+_chr3:46557674|46557735:+_chr3:46559152|46559688:+","UN_LRRC2_LS0008","LRRC2","protein coding gene","no",3.64,0,0,0.002,21,0,0,"0(0)","THYM","no","TE_intersect_:46546530|chr3|46546530|46546710|LTR37A:ERV1:LTR|226|+","TE_intersect_:46556876|chr3|46556876|46557049|L1MEf:L1:LINE|238|-","intron_intersect_chr3:46545253|46550506","intron_intersect_chr3:46551610|46557398"]
["chr3:46859598|46860676:-","chr3:46857872|46858101:-_chr3:46858231|46858272:-_chr3:46858384|46858461:-_chr3:46859475|46859598:-_chr3:46860676|46860825:-_chr3:46860960|46860987:-_chr3:46863262|46863396:-_chr3:46866390|46866600:-_chr3:46882074|46882169:-","UN_MYL3_LS0001","MYL3","protein coding gene","no",10.63,0,0,0.004,41,0,0,"0(0)","KIRP","no","NA","NA","exon_intersect_chr3:46860676|46860825","exon_intersect_chr3:46859475|46859648"]
["chr3:47572874|47573358:-","chr3:47562247|47569227:-_chr3:47572686|47572874:-_chr3:47573358|47573717:-","UN_CSPG5_LS0012","CSPG5","protein coding gene","no",4.55,0,0,0.005,48,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr3:47572874|47576833","intron_intersect_chr3:47572874|47576833"]
["chr3:48468469|48468612:-","chr3:48467855|48468469:-_chr3:48468612|48469186:-_chr3:48469361|48469573:-_chr3:48469728|48469843:-_chr3:48479177|48479257:-_chr3:48501137|48501293:-_chr3:48504019|48504214:-","UN_SHISA5_LS0089","SHISA5","protein coding gene","no",12.43,0,0,0.005,45,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr3:48467798|48469923","exon_intersect_chr3:48467798|48469923"]
["chr3:49163146|49163315:-","chr3:49162616|49163146:-_chr3:49163315|49164260:-_chr3:49166267|49166294:-","UN_CCDC71_LS0004","CCDC71","protein coding gene","no",6.7,0,0,0.006,53,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr3:49162535|49164260","exon_intersect_chr3:49162535|49164260"]
["chr3:49534944|49534996:-","chr3:49534886|49534944:-_chr3:49534996|49535279:-","UN_DAG1_LS0215","DAG1","protein coding gene","no",2.88,0,0,0.007,63,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr3:49530797|49535618","exon_intersect_chr3:49530797|49535618"]
["chr3:50296831|50297165:+","chr3:50296693|50296831:+_chr3:50297165|50297358:+","UN_NAA80_LS0003","NAA80","protein coding gene","no",2.56,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr3:50296402|50298083","exon_intersect_chr3:50296402|50298083"]
["chr3:50416213|50434313:-","chr3:50414918|50416213:-_chr3:50434313|50434429:-_chr3:50476118|50476199:-_chr3:50503218|50503423:-","CACNA2D2_LS039","CACNA2D2","protein coding gene","no",3.09,0,0,0.015,145,0,0,"0(0)","TGCT","yes","NA","NA","exon_intersect_chr3:50434313|50434429","exon_intersect_chr3:50415803|50416216"]
["chr3:51896894|51897322:-","chr3:51892995|51895336:-_chr3:51896832|51896894:-_chr3:51897322|51897452:-","UN_IQCF1_LS0001","IQCF1","protein coding gene","no",2.06,0,0,0.008,79,0,0,"0(0)","TGCT","no","TE_intersect_:51896961|chr3|51896961|51897435|LTR10F:ERV1:LTR|83|+","NA","intron_intersect_chr3:51896894|51902790","intron_intersect_chr3:51896894|51902790"]
["chr3:52797930|52798218:+","chr3:52793513|52794896:+_chr3:52795603|52795623:+_chr3:52796481|52796647:+_chr3:52796739|52796843:+_chr3:52797105|52797267:+_chr3:52797817|52797930:+_chr3:52798218|52798273:+_chr3:52798966|52799091:+_chr3:52799372|52799488:+_chr3:52799753|52799921:+_chr3:52800538|52800663:+_chr3:52800965|52801146:+_chr3:52801341|52801408:+_chr3:52802334|52802519:+_chr3:52802667|52802806:+_chr3:52803855|52804009:+_chr3:52804726|52804734:+_chr3:52805808|52805840:+_chr3:52806103|52806138:+_chr3:52806293|52806406:+_chr3:52806901|52807105:+_chr3:52807747|52807916:+_chr3:52808110|52808221:+_chr3:52808552|52808805:+","UN_ITIH3_LS0007","ITIH3","protein coding gene","no",5.51,0,0,0.004,41,0,0,"0(0)","LIHC","no","NA","TE_intersect_:52798172|chr3|52798172|52798245|MIRc:MIR:SINE|342|-","intron_intersect_chr3:52797930|52798570","intron_intersect_chr3:52797930|52798570"]
["chr3:54092865|54093591:+","chr3:54092646|54092865:+_chr3:54093591|54093691:+_chr3:54118567|54118789:+","UN_CACNA2D3_UP_LS0024","CACNA2D3","protein coding gene","yes",2.29,0,0,0.007,64,0,0,"0(0)","ESCA","no","TE_intersect_:54092570|chr3|54092570|54093038|MLT1E2:ERVL-MaLR:LTR|217|+","TE_intersect_:54093530|chr3|54093530|54094056|Tigger13a:TcMar-Tigger:DNA|311|+","NA","NA"]
["chr3:54642241|54732090:+","chr3:54122717|54122835:+_chr3:54123513|54123594:+_chr3:54320442|54320558:+_chr3:54386715|54386774:+_chr3:54503492|54503654:+_chr3:54562800|54562931:+_chr3:54569795|54569855:+_chr3:54569954|54570104:+_chr3:54581803|54581877:+_chr3:54627787|54627876:+_chr3:54642128|54642241:+_chr3:54732090|54732623:+","UN_CACNA2D3_LS0045","CACNA2D3","protein coding gene","yes",3.08,0,0,0.006,60,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr3:54642241|54752599","intron_intersect_chr3:54642241|54752599"]
["chr3:5699103|5841134:+","chr3:5698899|5699103:+_chr3:5841134|5841243:+_chr3:5905530|5906076:+","UN_AC087857.1_UP_LS0020","AC087857.1","lncRNA gene","no",9.02,0,0,0.005,48,0,0,"0(0)","BLCA","no","TE_intersect_:5698556|chr3|5698556|5699224|HERVIP10F-int:ERV1:LTR|189|-","NA","NA","NA"]
["chr3:5963515|5984525:+","chr3:5687754|5696125:+_chr3:5696378|5699103:+_chr3:5743664|5743833:+_chr3:5841134|5841243:+_chr3:5905530|5905925:+_chr3:5962725|5963081:+_chr3:5963434|5963515:+_chr3:5984525|5984630:+_chr3:5985121|5985263:+_chr3:5986990|5987538:+","UN_AC087857.1_LS0003","AC087857.1","lncRNA gene","no",1.55,0,0,0.003,33,0,0,"0(0)","BLCA","no","NA","TE_intersect_:5984447|chr3|5984447|5984837|MLT1A1:ERVL-MaLR:LTR|220|-","intron_intersect_chr3:5963515|6123976","intron_intersect_chr3:5963515|6123976"]
["chr3:60014264|60126871:-","chr3:59749308|59749579:-_chr3:59752221|59752321:-_chr3:59922346|59922414:-_chr3:60011371|60011400:-_chr3:60014007|60014264:-_chr3:60126871|60127158:-","UN_FHIT_LS0068","FHIT","protein coding gene","yes",3.97,0,0,0.002,21,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr3:60080840|60535810","intron_intersect_chr3:60014152|60077370"]
["chr3:62138214|62149846:-","chr3:62137131|62138214:-_chr3:62149846|62150045:-","UN_PTPRG_LS0049","PTPRG","protein coding gene","no",2.76,0,0,0.004,34,0,0,"0(0)","ACC","no","NA","TE_intersect_:62137394|chr3|62137394|62138387|HSMAR1:TcMar-Mariner:DNA|117|-","intron_intersect_chr3:62132668|62157067","intron_intersect_chr3:62132668|62157067"]
["chr3:6720271|6724450:+","chr3:6717540|6717667:+_chr3:6720087|6720271:+_chr3:6724450|6724546:+_chr3:6732271|6732495:+_chr3:6735662|6736742:+","UN_AC069277.1_LS0026","AC069277.1","lncRNA gene","no",4.26,0,0,0.009,88,0,0,"0(0)","ESCA;TGCT","no","TE_intersect_:6719412|chr3|6719412|6720510|L1MC3:L1:LINE|204|+","NA","intron_intersect_chr3:6717667|6721315","exon_intersect_chr3:6724450|6724546"]
["chr3:69859723|69877872:-","chr3:69851568|69851790:-_chr3:69859637|69859723:-_chr3:69877872|69877957:-_chr3:69888446|69888580:-","UN_MITF_LS0018","MITF","protein coding gene","yes",7.35,0,0,0.023,221,0,0,"0(0)","LGG;SKCM;UVM","no","NA","NA","intron_intersect_chr3:69866346|69879134","intron_intersect_chr3:69838632|69866212"]
["chr3:72304755|72312357:-","chr3:72274735|72275352:-_chr3:72292172|72292263:-_chr3:72292423|72292515:-_chr3:72302649|72302746:-_chr3:72304675|72304755:-_chr3:72312357|72312491:-","UN_LINC00877_UP_LS0007","LINC00877","lncRNA gene","no",11.83,0,0,0.001,14,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr3:75446535|75456617:+","chr3:75446433|75446535:+_chr3:75456617|75457473:+","UN_LINC02018_LS0021","LINC02018","lncRNA gene","no",2.51,0,0,0.003,29,0,0,"0(0)","TGCT","no","TE_intersect_:75446385|chr3|75446385|75446671|AluSx:Alu:SINE|107|-","NA","intron_intersect_chr3:75443646|75446769","exon_intersect_chr3:75456617|75457486"]
["chr3:80630255|80631231:-","chr3:80630221|80630255:-_chr3:80631231|80631287:-_chr3:80633815|80633971:-_chr3:80761438|80761573:-_chr3:80769759|80770373:-","UN_HMGB1P38_UP_LS0018","HMGB1P38","pseudogene","no",1.91,0,0,0.011,105,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr3:83379966|83384516:+","chr3:83216699|83218244:+_chr3:83231519|83231574:+_chr3:83273102|83273330:+_chr3:83317687|83317760:+_chr3:83379845|83379966:+_chr3:83384516|83384586:+_chr3:83391961|83392372:+","UN_SRRM1P2_UP_LS0031","SRRM1P2","pseudogene","no",3.88,0,0,0.012,119,0,0,"0(0)","LIHC","no","TE_intersect_:83379833|chr3|83379833|83380122|AluJb:Alu:SINE|176|-","TE_intersect_:83384309|chr3|83384309|83384667|THE1C:ERVL-MaLR:LTR|112|+","NA","NA"]
["chr3:8439652|8439733:-","chr3:8439048|8439652:-_chr3:8439733|8441245:-","UN_LMCD1-AS1_LS0038","LMCD1-AS1","lncRNA gene","no",5.81,0,0,0.003,32,0,0,"0(0)","ESCA","no","TE_intersect_:8439017|chr3|8439017|8441246|SVA_D:SVA:Retroposon|30|+","TE_intersect_:8439017|chr3|8439017|8441246|SVA_D:SVA:Retroposon|30|+","intron_intersect_chr3:8366392|8494681","intron_intersect_chr3:8366392|8494681"]
["chr3:8677370|8678132:+","chr3:8675310|8675543:+_chr3:8677293|8677370:+_chr3:8678132|8678306:+_chr3:8679792|8679866:+_chr3:8680644|8680818:+_chr3:8683665|8683740:+_chr3:8688182|8689159:+","UN_SSUH2_LS0054","SSUH2","protein coding gene","no",16.27,0,0,0.005,49,0,0,"0(0)","THYM","no","TE_intersect_:8677202|chr3|8677202|8677807|HERVE-int:ERV1:LTR|80|+","NA","exon_intersect_chr3:8677206|8677408","intron_intersect_chr3:8677408|8679705"]
["chr3:8963593|8964159:-","chr3:8877075|8881459:-_chr3:8890389|8890451:-_chr3:8898894|8899047:-_chr3:8902380|8902520:-_chr3:8912312|8912372:-_chr3:8913644|8913720:-_chr3:8935871|8936055:-_chr3:8939554|8939653:-_chr3:8941467|8941804:-_chr3:8947220|8947290:-_chr3:8948509|8948570:-_chr3:8958920|8959001:-_chr3:8963335|8963593:-_chr3:8964159|8964229:-","UN_OXTR_UP_LS0002","OXTR","protein coding gene","no",1.44,0,0,0.005,44,0,0,"0(0)","COAD","no","TE_intersect_:8964026|chr3|8964026|8964477|MER31A:ERV1:LTR|121|+","NA","NA","intron_intersect_chr3:8963593|8963676"]
["chr3:95683934|95722017:-","chr3:95666232|95668765:-_chr3:95682601|95683934:-_chr3:95722017|95722119:-","UN_MTHFD2P1_UP_LS0002","MTHFD2P1","pseudogene","no",2.53,0,0,0.013,122,0,0,"0(0)","GBM;KIRC;KIRP","no","NA","NA","NA","NA"]
["chr3:9820241|9820319:-","chr3:9820033|9820241:-_chr3:9820319|9820504:-","UN_TTLL3_LS0026","TTLL3","protein coding gene","no",2.92,0,0,0.002,22,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr3:9817645|9821041","exon_intersect_chr3:9817645|9821041"]
["chr4:1006980|1007614:+","chr4:1003429|1003470:+_chr4:1003549|1003625:+_chr4:1004012|1004112:+_chr4:1004260|1005292:+_chr4:1005327|1005989:+_chr4:1006918|1006980:+_chr4:1007614|1009536:+","UN_FGFRL1_UP_LS0011","FGFRL1","protein coding gene","no",2.58,0,0,0.006,53,0,0,"0(0)","LGG","no","TE_intersect_:1006858|chr4|1006858|1007020|L1MEc:L1:LINE|221|-","TE_intersect_:1007473|chr4|1007473|1007639|L1MEc:L1:LINE|214|-","NA","NA"]
["chr4:103237325|103256195:-","chr4:103210250|103210745:-_chr4:103237205|103237325:-_chr4:103256195|103256309:-","UN_CENPE_UP_LS0007","CENPE","protein coding gene","no",1.98,0,0,0.018,173,0,0,"0(0)","BLCA;ESCA;OV;STAD","no","TE_intersect_:103250265|chr4|103250265|103256290|L1PA2:L1:LINE|30|-","TE_intersect_:103237048|chr4|103237048|103237342|AluSx3:Alu:SINE|112|+","exon_intersect_chr4:103256159|103256294","NA"]
["chr4:103256294|103453600:+","chr4:103255843|103256294:+_chr4:103453600|103453813:+","UN_LINC02428_LS0009","LINC02428","lncRNA gene","no",2.46,0,0,0.006,54,0,0,"0(0)","OV","no","TE_intersect_:103256290|chr4|103256290|103256411|L1P5:L1:LINE|66|-","TE_intersect_:103453407|chr4|103453407|103453801|MLT1B:ERVL-MaLR:LTR|225|+","intron_intersect_chr4:103256294|103377003","exon_intersect_chr4:103453600|103453658"]
["chr4:108168902|108169110:+","chr4:108168863|108168902:+_chr4:108169110|108171337:+","UN_LEF1-AS1_LS0002","LEF1-AS1","lncRNA gene","no",1.56,0,0,0.003,33,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr4:108167555|108168956","intron_intersect_chr4:108168956|108171771"]
["chr4:109994339|109994733:+","chr4:109994155|109994339:+_chr4:109994733|109994880:+_chr4:109999679|109999846:+_chr4:110004505|110004622:+_chr4:110008152|110008254:+_chr4:110011202|110011491:+","UN_EGF_LS0026","EGF","protein coding gene","no",4.97,0,0,0.007,63,0,0,"0(0)","ACC;KICH","no","NA","NA","intron_intersect_chr4:109993369|109994733","exon_intersect_chr4:109994733|109994880"]
["chr4:1123218|1153603:-","chr4:1115199|1115409:-_chr4:1116264|1116410:-_chr4:1123118|1123218:-_chr4:1153603|1153786:-","UN_TMED11P_LS0003","TMED11P","pseudogene","no",14.68,0,0,0.003,32,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr4:1153601|1153726","exon_intersect_chr4:1123115|1123258"]
["chr4:113465604|113465698:-","chr4:113452961|113454515:-_chr4:113457291|113457563:-_chr4:113460147|113460241:-_chr4:113465529|113465604:-_chr4:113465698|113465821:-","UN_CAMK2D_LS0003","CAMK2D","protein coding gene","no",9.19,0,0,0.003,26,0,0,"0(0)","KICH","no","TE_intersect_:113465660|chr4|113465660|113465812|AluJb:Alu:SINE|171|-","NA","intron_intersect_chr4:113465604|113500463","intron_intersect_chr4:113465604|113500463"]
["chr4:113679496|113759320:-","chr4:113451032|113454515:-_chr4:113457335|113457563:-_chr4:113460147|113460241:-_chr4:113465529|113465604:-_chr4:113500463|113500511:-_chr4:113509638|113509675:-_chr4:113513328|113513370:-_chr4:113513830|113513913:-_chr4:113515069|113515191:-_chr4:113517563|113517657:-_chr4:113531216|113531299:-_chr4:113537341|113537443:-_chr4:113548657|113548729:-_chr4:113552031|113552096:-_chr4:113609152|113609206:-_chr4:113661713|113661772:-_chr4:113677508|113677608:-_chr4:113679403|113679496:-_chr4:113759320|113759414:-_chr4:113761004|113761876:-","UN_CAMK2D_LS0021","CAMK2D","protein coding gene","no",17.25,0,0,0.003,27,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr4:113759115|113759414","intron_intersect_chr4:113661772|113754739"]
["chr4:118233091|118237046:+","chr4:118033618|118034592:+_chr4:118053756|118054891:+_chr4:118105018|118105105:+_chr4:118114806|118114960:+_chr4:118138054|118138239:+_chr4:118143556|118143684:+_chr4:118224491|118224673:+_chr4:118226886|118226982:+_chr4:118233012|118233091:+_chr4:118237046|118237220:+_chr4:118240524|118242149:+_chr4:118253499|118253601:+_chr4:118255593|118258648:+","UN_NDST3_LS0007","NDST3","protein coding gene","no",4.44,0,0,0.007,65,0,0,"0(0)","PCPG;THYM","no","NA","NA","exon_intersect_chr4:118233012|118233135","exon_intersect_chr4:118237046|118237220"]
["chr4:119412542|119413285:-","chr4:119412381|119412542:-_chr4:119413285|119413407:-_chr4:119419042|119419106:-_chr4:119419959|119420155:-_chr4:119420494|119420590:-_chr4:119422451|119422534:-","UN_GTF2IP12_LS0014","GTF2IP12","pseudogene","no",1.1,0,0,0.003,29,0,0,"0(0)","ESCA","no","TE_intersect_:119413165|chr4|119413165|119413433|AluJr4:Alu:SINE|194|+","TE_intersect_:119412382|chr4|119412382|119412565|AluJb:Alu:SINE|208|+","NA","NA"]
["chr4:121564709|121564780:-","chr4:121563817|121564709:-_chr4:121564780|121565180:-","UN_QRFPR_UP_LS0002","QRFPR","protein coding gene","no",4.04,0,0,0.004,42,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chr4:123504369|123652787:+","chr4:123504192|123504369:+_chr4:123652787|123652902:+_chr4:123661753|123661833:+_chr4:123829095|123829187:+_chr4:123924097|123924200:+_chr4:123925184|123925337:+_chr4:123930248|123930777:+","UN_PPIAP76_UP_LS0003","PPIAP76","pseudogene","no",4.05,0,0,0.006,59,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:123504323|chr4|123504323|123504465|MLT1K:ERVL-MaLR:LTR|257|-","NA","intron_intersect_chr4:123496944|123505279","exon_intersect_chr4:123652787|123652902"]
["chr4:124432136|124432477:-","chr4:124377723|124377879:-_chr4:124432010|124432136:-_chr4:124432477|124432547:-","UN_AC121154.1_UP_LS0018","AC121154.1","lncRNA gene","no",1.87,0,0,0.007,66,0,0,"0(0)","BLCA;ESCA","no","TE_intersect_:124432326|chr4|124432326|124432506|MER105:hAT-Charlie:DNA|244|-","NA","NA","NA"]
["chr4:131427617|131527230:+","chr4:131380013|131380341:+_chr4:131427500|131427617:+_chr4:131527230|131527288:+_chr4:131528060|131528119:+","UN_LINC02377_LS0010","LINC02377","lncRNA gene","no",3.92,0,0,0.028,265,0,0,"0(0)","BLCA;ESCA;LUSC;SKCM;TGCT;UCS","no","TE_intersect_:131427486|chr4|131427486|131427768|AluJb:Alu:SINE|206|-","TE_intersect_:131526974|chr4|131526974|131527293|PABL_B:ERV1:LTR|256|+","intron_intersect_chr4:131380341|131485957","exon_intersect_chr4:131527230|131527288"]
["chr4:131528173|131534851:-","chr4:131498606|131503784:-_chr4:131528052|131528173:-_chr4:131534851|131535395:-","UN_LINC02377_LS0022","LINC02377","lncRNA gene","no",2.77,0,0,0.01,95,0,0,"0(0)","KIRC","no","TE_intersect_:131534629|chr4|131534629|131535137|LTR38-int:ERV1:LTR|285|-","NA","intron_intersect_chr4:131528121|131540281","intron_intersect_chr4:131528121|131540281"]
["chr4:134678353|134681096:-","chr4:134678055|134678353:-_chr4:134681096|134685115:-","UN_AC109830.1_UP_LS0017","AC109830.1","lncRNA gene","no",3.57,0,0,0.002,23,0,0,"0(0)","OV","no","TE_intersect_:134680243|chr4|134680243|134683143|HERVH-int:ERV1:LTR|104|-","TE_intersect_:134678346|chr4|134678346|134678724|HERVH-int:ERV1:LTR|102|-","NA","NA"]
["chr4:1394829|1395169:-","chr4:1394478|1394551:-_chr4:1394612|1394704:-_chr4:1394797|1394829:-_chr4:1395169|1395245:-","UN_UVSSA_LS0117","UVSSA","protein coding gene","no",2.91,0,0,0.003,29,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr4:1391552|1395989","exon_intersect_chr4:1391552|1395989"]
["chr4:140260543|140262234:+","chr4:140260240|140260543:+_chr4:140262234|140262365:+_chr4:140263158|140263344:+_chr4:140269386|140269668:+","UN_SCOC_LS0006","SCOC","protein coding gene","no",2.77,0,0,0.003,24,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr4:140257410|140283724","intron_intersect_chr4:140257410|140283724"]
["chr4:141982441|142039704:+","chr4:141977671|141978084:+_chr4:141982233|141982441:+_chr4:142039704|142039789:+_chr4:142050799|142052195:+","UN_LSM3P4_UP_LS0030","LSM3P4","pseudogene","no",10.04,0,0,0.01,95,0,0,"0(0)","OV","no","TE_intersect_:141981696|chr4|141981696|141983741|MER57-int:ERV1:LTR|117|+","TE_intersect_:142039678|chr4|142039678|142039857|Plat_L3:CR1:LINE|311|+","NA","intron_intersect_chr4:142030302|142082031"]
["chr4:143749310|143761244:+","chr4:143700193|143700291:+_chr4:143738975|143739117:+_chr4:143749208|143749310:+_chr4:143761244|143761480:+","UN_AC139713.2_LS0017","AC139713.2","lncRNA gene","no",3.31,0,0,0.005,49,0,0,"0(0)","LGG","no","NA","TE_intersect_:143761012|chr4|143761012|143761527|MLT2B1:ERVL:LTR|186|+","intron_intersect_chr4:143739117|143760399","intron_intersect_chr4:143761005|143761530"]
["chr4:145696032|145696559:+","chr4:145695672|145696032:+_chr4:145696559|145696632:+_chr4:145699187|145701637:+_chr4:145726911|145726969:+_chr4:145729169|145729229:+_chr4:145729892|145729965:+_chr4:145732453|145732619:+_chr4:145751387|145751448:+_chr4:145754207|145754351:+","UN_C4orf51_LS0006","C4orf51","protein coding gene","no",1.22,0,0,0.004,42,0,0,"0(0)","TGCT","no","TE_intersect_:145695994|chr4|145695994|145696266|AluSc:Alu:SINE|103|+","NA","intron_intersect_chr4:145680436|145696559","exon_intersect_chr4:145696559|145696632"]
["chr4:145732619|145772825:+","chr4:145732454|145732619:+_chr4:145772825|145772895:+_chr4:145777387|145777438:+_chr4:145782353|145782439:+_chr4:145792162|145792519:+","UN_AC104791.1_UP_LS0003","AC104791.1","lncRNA gene","no",2.47,0,0,0.002,19,0,0,"0(0)","KICH","no","NA","NA","exon_intersect_chr4:145732453|145732797","intron_intersect_chr4:145771032|145774506"]
["chr4:146277798|146329900:+","chr4:146277536|146277798:+_chr4:146329900|146329986:+_chr4:146334861|146343703:+","UN_SLC10A7_LS0010","SLC10A7","protein coding gene","no",2.85,0,0,0.007,65,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr4:146258837|146283192","intron_intersect_chr4:146325996|146408583"]
["chr4:150659849|150659900:+","chr4:150658796|150659849:+_chr4:150659900|150659948:+_chr4:150660348|150661055:+","UN_LRBA_LS0039","LRBA","protein coding gene","no",1.37,0,0,0.001,13,0,0,"0(0)","ESCA","no","TE_intersect_:150658775|chr4|150658775|150661088|SVA_F:SVA:Retroposon|68|+","TE_intersect_:150658775|chr4|150658775|150661088|SVA_F:SVA:Retroposon|68|+","intron_intersect_chr4:150639866|150679588","intron_intersect_chr4:150639866|150679588"]
["chr4:152918469|152942928:+","chr4:152779877|152780226:+_chr4:152829625|152829726:+_chr4:152863606|152863714:+_chr4:152870753|152870848:+_chr4:152872452|152872564:+_chr4:152880963|152881184:+_chr4:152882723|152882880:+_chr4:152888133|152888307:+_chr4:152910064|152912002:+_chr4:152917008|152917084:+_chr4:152918403|152918469:+_chr4:152942928|152943555:+_chr4:152953499|152953560:+_chr4:152954217|152954319:+_chr4:152960565|152960650:+_chr4:152960744|152960844:+_chr4:152962814|152962884:+_chr4:152963081|152963130:+_chr4:152964905|152964975:+_chr4:152967980|152968097:+_chr4:152972377|152972541:+_chr4:152974675|152979671:+","UN_AC093599.1_UP_LS0002","AC093599.1","lncRNA gene","no",0.88,0,0,0.004,40,0,0,"0(0)","STAD","no","NA","NA","NA","exon_intersect_chr4:152942928|152943555"]
["chr4:153842267|153883959:+","chr4:153810586|153810691:+_chr4:153840157|153840327:+_chr4:153842133|153842267:+_chr4:153883959|153884053:+_chr4:153948821|153948861:+_chr4:153967231|153967323:+_chr4:154142116|154142242:+_chr4:154201748|154201831:+_chr4:154206968|154207053:+_chr4:154272168|154272286:+_chr4:154298253|154298521:+","UN_AC079298.3_UP_LS0017","AC079298.3","lncRNA gene","no",4.42,0,0,0.004,42,0,0,"0(0)","KICH","no","TE_intersect_:153842115|chr4|153842115|153842340|AluJr:Alu:SINE|129|-","TE_intersect_:153883545|chr4|153883545|153884127|MLT2F:ERVL:LTR|279|+","NA","NA"]
["chr4:1546694|1547161:+","chr4:1545200|1546694:+_chr4:1547161|1551685:+_chr4:1551975|1552113:+","UN_AC147067.2_UP_LS0033","AC147067.2","lncRNA gene","no",0.4,0,0,0.003,27,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr4:155961983|155964288:+","chr4:155961840|155961983:+_chr4:155964288|155964406:+_chr4:155965410|155965543:+_chr4:155973466|155974461:+","UN_FTH1P21_UP_LS0012","FTH1P21","pseudogene","no",1.18,0,0,0.005,48,0,0,"0(0)","LGG","no","TE_intersect_:155961853|chr4|155961853|155962144|AluSz:Alu:SINE|182|-","NA","NA","NA"]
["chr4:156583648|156589232:+","chr4:156558343|156559199:+_chr4:156567997|156568097:+_chr4:156583553|156583648:+_chr4:156589232|156590039:+","UN_AC096736.2_UP_LS0001","AC096736.2","lncRNA gene","no",8.32,0,0,0.004,35,0,0,"0(0)","UCS","no","NA","TE_intersect_:156588992|chr4|156588992|156589416|MSTB1:ERVL-MaLR:LTR|187|+","NA","exon_intersect_chr4:156589232|156590039"]
["chr4:157918283|157918743:-","chr4:157803132|157803701:-_chr4:157805251|157805342:-_chr4:157834987|157835365:-_chr4:157918172|157918283:-_chr4:157918743|157918952:-_chr4:157929612|157929709:-_chr4:157987706|157987775:-_chr4:158034043|158034159:-_chr4:158093531|158093926:-_chr4:158094578|158094841:-","UN_AC017037.3_UP_LS0006","AC017037.3","lncRNA gene","no",5.36,0,0,0.005,44,0,0,"0(0)","BRCA","no","TE_intersect_:157918723|chr4|157918723|157918853|L2b:L2:LINE|344|-","NA","NA","NA"]
["chr4:16393173|16393273:-","chr4:16392535|16393173:-_chr4:16393273|16393591:-","UN_ZEB2P1_LS0002","ZEB2P1","pseudogene","no",1.27,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:16392531|chr4|16392531|16394357|SVA_D:SVA:Retroposon|24|-","TE_intersect_:16392531|chr4|16392531|16394357|SVA_D:SVA:Retroposon|24|-","intron_intersect_chr4:16387922|16396531","intron_intersect_chr4:16387922|16396531"]
["chr4:167857983|167873318:+","chr4:167857882|167857983:+_chr4:167873318|167873443:+_chr4:167873694|167873770:+_chr4:167874363|167874463:+_chr4:167875002|167875108:+_chr4:167876363|167876856:+_chr4:167877895|167878781:+_chr4:167881675|167882507:+","UN_ANXA10_UP_LS0003","ANXA10","protein coding gene","no",1.59,0,0,0.005,51,0,0,"0(0)","ESCA","no","TE_intersect_:167857881|chr4|167857881|167863903|L1PA3:L1:LINE|32|+","NA","NA","NA"]
["chr4:167888734|167893883:-","chr4:167882582|167882837:-_chr4:167888651|167888734:-_chr4:167893883|167893968:-_chr4:167896046|167896265:-","UN_AC105148.1_UP_LS0021","AC105148.1","pseudogene","no",2.39,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr4:170084810|170087116:-","chr4:170073161|170073345:-_chr4:170078509|170078583:-_chr4:170084725|170084810:-_chr4:170087116|170087248:-_chr4:170088396|170088564:-_chr4:170089624|170089967:-","UN_AADAT_LS0014","AADAT","protein coding gene","no",1.64,0,0,0.012,115,0,0,"0(0)","ESCA;PRAD;STAD","no","NA","TE_intersect_:170084715|chr4|170084715|170084833|LTR89:ERVL?:LTR|299|-","exon_intersect_chr4:170087116|170087248","intron_intersect_chr4:170078583|170087116"]
["chr4:172129928|172155981:-","chr4:172116949|172121791:-_chr4:172122188|172122278:-_chr4:172129798|172129928:-_chr4:172155981|172156259:-","UN_GALNTL6_LS0009","GALNTL6","protein coding gene","no",5.18,0,0,0.005,46,0,0,"0(0)","TGCT","no","NA","TE_intersect_:172129924|chr4|172129924|172130258|MER65A:ERV1:LTR|177|-","intron_intersect_chr4:172052531|172229656","intron_intersect_chr4:172052531|172229656"]
["chr4:173388574|173391185:+","chr4:173384590|173384737:+_chr4:173388513|173388574:+_chr4:173391185|173391531:+","UN_SCRG1_LS0008","SCRG1","protein coding gene","no",2.78,0,0,0.005,47,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr4:173388395|173389595","exon_intersect_chr4:173391173|173391428"]
["chr4:173634744|173696610:+","chr4:173608590|173609211:+_chr4:173634611|173634744:+_chr4:173696610|173696704:+_chr4:173697150|173697217:+","UN_LINC02269_UP_LS0002","LINC02269","lncRNA gene","no",3.1,0,0,0.015,144,0,0,"0(0)","ESCA;LUSC;OV","no","TE_intersect_:173634725|chr4|173634725|173636254|L1ME1:L1:LINE|229|-","NA","NA","NA"]
["chr4:175834868|175835327:+","chr4:175808434|175808762:+_chr4:175832767|175833090:+_chr4:175834832|175834868:+_chr4:175835327|175835547:+","UN_GPM6A_LS0025","GPM6A","protein coding gene","yes",7,0,0,0.013,125,0,0,"0(0)","GBM;LGG","no","NA","NA","intron_intersect_chr4:175812751|175872663","intron_intersect_chr4:175812751|175872663"]
["chr4:177344704|177351380:+","chr4:177309845|177310109:+_chr4:177322459|177322580:+_chr4:177335688|177335822:+_chr4:177336108|177336321:+_chr4:177339783|177339857:+_chr4:177341476|177341642:+_chr4:177344574|177344704:+_chr4:177351380|177351549:+_chr4:177353308|177353728:+_chr4:177360503|177360677:+_chr4:177362289|177362943:+","UN_NEIL3_LS0011","NEIL3","protein coding gene","no",1.78,0,0,0.005,50,0,0,"0(0)","THYM","no","TE_intersect_:177344551|chr4|177344551|177344860|AluSx1:Alu:SINE|87|-","NA","intron_intersect_chr4:177343718|177351380","exon_intersect_chr4:177351380|177351549"]
["chr4:182881230|182891036:+","chr4:182881137|182881230:+_chr4:182891036|182891257:+","UN_FAM92A1P2_UP_LS0033","FAM92A1P2","pseudogene","no",1.93,0,0,0.006,62,0,0,"0(0)","GBM","no","NA","NA","NA","exon_intersect_chr4:182890060|182891477"]
["chr4:184342053|184347773:-","chr4:184334241|184342053:-_chr4:184347773|184347912:-","UN_LINC02363_LS0009","LINC02363","lncRNA gene","no",2.4,0,0,0.002,16,0,0,"0(0)","ACC","no","NA","TE_intersect_:184341789|chr4|184341789|184342273|MLT1H:ERVL-MaLR:LTR|285|-","exon_intersect_chr4:184347713|184347912","intron_intersect_chr4:184342053|184347713"]
["chr4:186590403|186592706:-","chr4:186587827|186589220:-_chr4:186590368|186590403:-_chr4:186592706|186592752:-_chr4:186595689|186595800:-","UN_FAT1_LS0019","FAT1","protein coding gene","yes",5.85,0,0,0.003,33,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr4:186592693|186592752","intron_intersect_chr4:186590403|186590505"]
["chr4:187672454|187704964:+","chr4:187671829|187672454:+_chr4:187704964|187705423:+_chr4:187711744|187712236:+","UN_AC108073.1_UP_LS0002","AC108073.1","pseudogene","no",2.01,0,0,0.025,241,0,0,"0(0)","ESCA;LUAD;LUSC;OV;SKCM;TGCT;UCS","no","TE_intersect_:187671192|chr4|187671192|187672742|L1PB1:L1:LINE|78|-","NA","intron_intersect_chr4:187665838|187672562","NA"]
["chr4:189881259|189881303:+","chr4:189881209|189881259:+_chr4:189881303|189881531:+","UN_FRG1-DT_LS0028","FRG1-DT","lncRNA gene","no",4.13,0,0,0.002,22,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr4:189864786|189881515","intron_intersect_chr4:189864786|189881515"]
["chr4:19455652|19856276:+","chr4:19455551|19455652:+_chr4:19856276|19856395:+_chr4:19935715|19935802:+_chr4:19937440|19938373:+","UN_AC024230.1_LS0002","AC024230.1","lncRNA gene","no",5.1,0,0,0.007,63,0,0,"0(0)","OV","no","NA","TE_intersect_:19856267|chr4|19856267|19856603|MLT1F2:ERVL-MaLR:LTR|308|+","intron_intersect_chr4:19455652|19456646","exon_intersect_chr4:19856276|19856395"]
["chr4:19856395|19887172:+","chr4:19455436|19455652:+_chr4:19533548|19533618:+_chr4:19537017|19537094:+_chr4:19856276|19856395:+_chr4:19887172|19894370:+","UN_AC024230.1_LS0059","AC024230.1","lncRNA gene","no",1.48,0,0,0.003,29,0,0,"0(0)","OV","no","TE_intersect_:19856267|chr4|19856267|19856603|MLT1F2:ERVL-MaLR:LTR|308|+","TE_intersect_:19887172|chr4|19887172|19887554|MER48:ERV1:LTR|118|+","intron_intersect_chr4:19856395|19909212","intron_intersect_chr4:19856395|19909212"]
["chr4:19856395|19887232:+","chr4:19455436|19455652:+_chr4:19533548|19533618:+_chr4:19856276|19856395:+_chr4:19887232|19894323:+","UN_AC024230.1_LS0060","AC024230.1","lncRNA gene","no",1.57,0,0,0.003,24,0,0,"0(0)","OV","no","TE_intersect_:19856267|chr4|19856267|19856603|MLT1F2:ERVL-MaLR:LTR|308|+","TE_intersect_:19887172|chr4|19887172|19887554|MER48:ERV1:LTR|118|+","intron_intersect_chr4:19856395|19909212","intron_intersect_chr4:19856395|19909212"]
["chr4:2068555|2068578:-","chr4:2068283|2068555:-_chr4:2068578|2068783:-","UN_NAT8L_LS0046","NAT8L","protein coding gene","no",5.91,0,0,0.004,43,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr4:2063760|2069089","exon_intersect_chr4:2063760|2069089"]
["chr4:22096047|22268403:-","chr4:21975088|21976456:-_chr4:22095937|22096047:-_chr4:22268403|22268741:-","UN_AC096719.1_LS0021","AC096719.1","lncRNA gene","no",4.88,0.08,0,0.036,346,0.001,1,"0(0)","LUSC","no","TE_intersect_:22268108|chr4|22268108|22273092|L1PB1:L1:LINE|153|+","TE_intersect_:22095872|chr4|22095872|22096227|MLT1A0:ERVL-MaLR:LTR|191|-","intron_intersect_chr4:22119089|22329316","intron_intersect_chr4:22059360|22101494"]
["chr4:2297665|2306891:+","chr4:2296753|2297665:+_chr4:2306891|2307397:+","UN_ZFYVE28_LS0016","ZFYVE28","protein coding gene","no",2.56,0,0,0.001,11,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr4:2295845|2304289","exon_intersect_chr4:2306891|2307098"]
["chr4:2514500|2515000:-","chr4:2514299|2514500:-_chr4:2515000|2515102:-","UN_RNF4_LS0050","RNF4","protein coding gene","no",1.27,0,0,0.003,26,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr4:2513670|2515855","exon_intersect_chr4:2513670|2515855"]
["chr4:2590256|2609715:+","chr4:2589498|2590256:+_chr4:2609715|2609913:+","UN_FAM193A_LS0021","FAM193A","protein coding gene","no",1.1,0,0,0.002,22,0,0,"0(0)","OV","no","TE_intersect_:2590189|chr4|2590189|2590493|AluSc:Alu:SINE|95|+","TE_intersect_:2609663|chr4|2609663|2609940|AluSc8:Alu:SINE|98|+","intron_intersect_chr4:2515855|2596084","intron_intersect_chr4:2608146|2615124"]
["chr4:2690970|2693070:+","chr4:2659888|2660054:+_chr4:2662838|2662991:+_chr4:2663109|2663288:+_chr4:2672121|2672372:+_chr4:2689506|2689704:+_chr4:2690698|2690970:+_chr4:2693070|2693161:+_chr4:2693586|2693874:+_chr4:2694946|2695129:+_chr4:2696363|2696593:+_chr4:2699680|2700544:+_chr4:2716023|2716104:+_chr4:2731775|2732573:+","UN_FAM193A_LS0058","FAM193A","protein coding gene","no",0.95,0.01,0,0.005,47,0.004,3,"0(0)","LAML","no","NA","TE_intersect_:2693050|chr4|2693050|2693317|AluSc8:Alu:SINE|90|-","intron_intersect_chr4:2690970|2693586","intron_intersect_chr4:2690970|2693586"]
["chr4:28317538|28343841:-","chr4:28315874|28317538:-_chr4:28343841|28343892:-_chr4:28370700|28370809:-_chr4:28393204|28393350:-_chr4:28394196|28394300:-_chr4:28402652|28402930:-","UN_AC007106.1_UP_LS0008","AC007106.1","lncRNA gene","no",3.9,0,0,0.009,84,0,0,"0(0)","SKCM","no","NA","TE_intersect_:28317293|chr4|28317293|28317664|MLT1B:ERVL-MaLR:LTR|182|-","NA","NA"]
["chr4:29725458|29745772:-","chr4:29725114|29725458:-_chr4:29745772|29746105:-","UN_AC092593.1_UP_LS0015","AC092593.1","pseudogene","no",4.84,0,0,0.002,19,0,0,"0(0)","KICH","no","TE_intersect_:29745632|chr4|29745632|29746024|MSTA:ERVL-MaLR:LTR|165|-","NA","NA","NA"]
["chr4:32228793|32235875:+","chr4:31997397|31997822:+_chr4:32155314|32155406:+_chr4:32157956|32158081:+_chr4:32225024|32225121:+_chr4:32228007|32228793:+_chr4:32235875|32236472:+","UN_LINC02353_UP_LS0041","LINC02353","lncRNA gene","no",3.76,0,0,0.008,80,0,0,"0(0)","OV;UCS","no","NA","TE_intersect_:32235720|chr4|32235720|32236093|MLT1F2:ERVL-MaLR:LTR|262|+","NA","NA"]
["chr4:34182599|34259087:-","chr4:34179488|34182599:-_chr4:34259087|34259226:-_chr4:34270971|34271103:-","UN_LINC02484_LS0009","LINC02484","lncRNA gene","no",6.84,0,0,0.006,57,0,0,"0(0)","LIHC;TGCT","no","NA","TE_intersect_:34182550|chr4|34182550|34182687|LTR67B:ERVL:LTR|347|+","exon_intersect_chr4:34259087|34259226","intron_intersect_chr4:34125862|34259087"]
["chr4:3544923|3545183:+","chr4:3544555|3544923:+_chr4:3545183|3550848:+","UN_AL590235.1_LS0001","AL590235.1","lncRNA gene","no",2.33,0,0,0.005,48,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr4:3544923|3545095","exon_intersect_chr4:3545095|3545229"]
["chr4:37588881|37591113:-","chr4:37587982|37588881:-_chr4:37591113|37591217:-_chr4:37631385|37631523:-_chr4:37634887|37635123:-_chr4:37638447|37638504:-_chr4:37647368|37647439:-_chr4:37649276|37649500:-_chr4:37686200|37686376:-","UN_C4orf19_LS0079","C4orf19","protein coding gene","no",1.68,0,0,0.004,34,0,0,"0(0)","LAML","no","TE_intersect_:37591081|chr4|37591081|37591190|MamRep1894:hAT:DNA|294|-","NA","exon_intersect_chr4:37590800|37591217","exon_intersect_chr4:37588846|37588899"]
["chr4:3924267|3929972:-","chr4:3921380|3921782:-_chr4:3924071|3924267:-_chr4:3929972|3933044:-","UN_AC226119.1_LS0006","AC226119.1","lncRNA gene","no",3.19,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:3927854|chr4|3927854|3930775|HERVH-int:ERV1:LTR|104|+","NA","intron_intersect_chr4:3924274|3935447","exon_intersect_chr4:3924071|3924274"]
["chr4:3927995|3932660:+","chr4:3927363|3927562:+_chr4:3927846|3927995:+_chr4:3932660|3933044:+","UN_AC226119.1_LS0024","AC226119.1","lncRNA gene","no",4.86,0,0,0.008,81,0,0,"0(0)","MESO;OV;TGCT","no","TE_intersect_:3927854|chr4|3927854|3930775|HERVH-int:ERV1:LTR|104|+","TE_intersect_:3932289|chr4|3932289|3932669|HERVH-int:ERV1:LTR|96|+","intron_intersect_chr4:3924274|3935447","intron_intersect_chr4:3924274|3935447"]
["chr4:40142058|40142673:+","chr4:40140582|40142058:+_chr4:40142673|40142861:+_chr4:40144632|40144800:+_chr4:40152780|40152903:+_chr4:40154192|40154267:+_chr4:40157862|40158247:+","UN_N4BP2_LS0052","N4BP2","protein coding gene","no",2.4,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:40140581|chr4|40140581|40142144|SVA_D:SVA:Retroposon|35|-","NA","intron_intersect_chr4:40137082|40142198","exon_intersect_chr4:40142673|40142861"]
["chr4:40605152|40605729:+","chr4:40593696|40605152:+_chr4:40605729|40616907:+","UN_RBM47_LS0092","RBM47","protein coding gene","no",3.51,0,0,0.002,15,0,0,"0(0)","LAML","no","TE_intersect_:40605044|chr4|40605044|40605323|AluSq2:Alu:SINE|86|-","TE_intersect_:40605548|chr4|40605548|40605850|AluSx:Alu:SINE|96|+","intron_intersect_chr4:40544506|40629396","intron_intersect_chr4:40544506|40629396"]
["chr4:42286401|42292107:-","chr4:42285822|42286401:-_chr4:42292107|42292653:-","UN_AC024022.1_LS0003","AC024022.1","lncRNA gene","no",19.1,0.18,0,0.08,763,0.006,4,"0(0)","TGCT","no","TE_intersect_:42290317|chr4|42290317|42292137|HERV17-int:ERV1:LTR|77|-","TE_intersect_:42286149|chr4|42286149|42286439|HERV17-int:ERV1:LTR|83|-","intron_intersect_chr4:42283391|42299012","intron_intersect_chr4:42283391|42299012"]
["chr4:4362704|4362909:-","chr4:4362254|4362704:-_chr4:4362909|4363007:-","UN_NSG1_LS0011","NSG1","protein coding gene","no",2.38,0,0,0.004,43,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:4362903|chr4|4362903|4363216|MLT1D:ERVL-MaLR:LTR|265|+","TE_intersect_:4362429|chr4|4362429|4362744|AluSx:Alu:SINE|114|+","intron_intersect_chr4:4348471|4380982","intron_intersect_chr4:4348471|4380982"]
["chr4:4418974|4419566:+","chr4:4386538|4386643:+_chr4:4387119|4387173:+_chr4:4387604|4387758:+_chr4:4391475|4391591:+_chr4:4409573|4409683:+_chr4:4417235|4418974:+_chr4:4419566|4419730:+","UN_STX18_LS0005","STX18","protein coding gene","no",3.49,0,0,0.009,85,0,0,"0(0)","SKCM;TGCT;UVM","no","NA","NA","exon_intersect_chr4:4418968|4420944","exon_intersect_chr4:4418968|4420944"]
["chr4:48292842|48295758:+","chr4:48292783|48292842:+_chr4:48295758|48297746:+","UN_SLAIN2_UP_LS0022","SLAIN2","protein coding gene","no",2.15,0,0,0.006,58,0,0,"0(0)","OV","no","TE_intersect_:48291728|chr4|48291728|48293365|SVA_C:SVA:Retroposon|41|+","NA","NA","NA"]
["chr4:49244357|49488466:-","chr4:49234190|49235211:-_chr4:49235365|49235535:-_chr4:49237102|49237221:-_chr4:49242709|49242931:-_chr4:49244273|49244357:-_chr4:49488466|49488647:-_chr4:49494949|49495100:-","UN_SNX18P23_UP_LS0015","SNX18P23","pseudogene","no",4.95,0,0,0.012,118,0,0,"0(0)","ACC;KIRC;SKCM;UVM","no","NA","NA","exon_intersect_chr4:49488434|49488647","exon_intersect_chr4:49244273|49244484"]
["chr4:52920870|52941255:-","chr4:52873788|52874061:-_chr4:52885747|52885866:-_chr4:52907457|52907591:-_chr4:52920725|52920870:-_chr4:52941255|52941279:-_chr4:52943797|52943837:-","UN_SCFD2_LS0011","SCFD2","protein coding gene","no",2.33,0,0,0.002,21,0,0,"0(0)","KICH;UVM","no","TE_intersect_:52941168|chr4|52941168|52941375|L2a:L2:LINE|280|-","NA","intron_intersect_chr4:52920870|52945649","intron_intersect_chr4:52920870|52945649"]
["chr4:55009491|55012939:+","chr4:54964109|54964179:+_chr4:55005603|55005731:+_chr4:55009444|55009491:+_chr4:55012939|55012993:+_chr4:55016063|55016696:+","UN_AC111194.2_UP_LS0012","AC111194.2","lncRNA gene","no",9.85,0,0,0.004,35,0,0,"0(0)","SKCM","no","NA","NA","NA","NA"]
["chr4:56697886|56702314:-","chr4:56695995|56697886:-_chr4:56702314|56702402:-_chr4:56703571|56703746:-_chr4:56742175|56742260:-","UN_HOPX_UP_LS0019","HOPX","protein coding gene","yes",2.74,0,0,0.007,67,0,0,"0(0)","GBM","no","NA","TE_intersect_:56697734|chr4|56697734|56697940|MIR:MIR:SINE|333|+","NA","NA"]
["chr4:576761|577290:+","chr4:576418|576761:+_chr4:577290|582817:+","UN_PDE6B_UP_LS0002","PDE6B","protein coding gene","no",2.86,0,0,0.004,36,0,0,"0(0)","GBM;PCPG","no","NA","NA","NA","NA"]
["chr4:64941039|64977489:-","chr4:64885619|64885848:-_chr4:64888328|64888550:-_chr4:64937607|64937839:-_chr4:64939273|64939365:-_chr4:64939956|64940036:-_chr4:64940968|64941039:-_chr4:64977489|64977629:-_chr4:65004403|65004501:-_chr4:65008782|65008912:-_chr4:65024237|65024456:-","UN_LINC02232_LS0010","LINC02232","lncRNA gene","no",1.99,0,0,0.001,11,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr4:64977489|64977629","intron_intersect_chr4:64940036|64977489"]
["chr4:66863117|67141284:-","chr4:66861734|66863117:-_chr4:67141284|67141401:-_chr4:67152970|67153128:-","UN_RNU2-40P_UP_LS0009","RNU2-40P","small non-coding RNA gene","no",4.13,0,0,0.005,51,0,0,"0(0)","OV","no","NA","TE_intersect_:66862939|chr4|66862939|66863210|MamRep38:hAT:DNA|304|+","NA","NA"]
["chr4:68521280|68535653:+","chr4:68515455|68515572:+_chr4:68521135|68521280:+_chr4:68535653|68535811:+_chr4:68537066|68537189:+","UN_AC147055.2_UP_LS0005","AC147055.2","pseudogene","no",3.96,0,0,0.014,138,0,0,"0(0)","ESCA;LUSC","no","NA","TE_intersect_:68530433|chr4|68530433|68536663|L1PA8:L1:LINE|123|-","NA","NA"]
["chr4:68920379|68921225:-","chr4:68914143|68915201:-_chr4:68920161|68920379:-_chr4:68921225|68921312:-_chr4:68924589|68924741:-_chr4:68928099|68930092:-_chr4:68930546|68930765:-_chr4:68931155|68931242:-_chr4:68932628|68932759:-_chr4:68945306|68945454:-_chr4:68948010|68950436:-","UN_AC021146.1_LS0005","AC021146.1","pseudogene","no",4.31,0,0,0.009,86,0,0,"0(0)","KIRC","no","NA","NA","exon_intersect_chr4:68921225|68921312","exon_intersect_chr4:68920163|68920386"]
["chr4:70665256|70679177:+","chr4:70665229|70665256:+_chr4:70679177|70679277:+_chr4:70681499|70681599:+_chr4:70682166|70682682:+","UN_ENAM_LS0028","ENAM","protein coding gene","no",3.14,0,0,0.001,13,0,0,"0(0)","THYM","no","TE_intersect_:70665175|chr4|70665175|70665418|MIR:MIR:SINE|298|+","NA","intron_intersect_chr4:70664149|70665860","intron_intersect_chr4:70666975|70681499"]
["chr4:72894563|72895308:-","chr4:72773207|72775995:-_chr4:72783933|72784036:-_chr4:72809056|72809134:-_chr4:72815183|72815284:-_chr4:72894448|72894563:-_chr4:72895308|72895576:-","UN_ADAMTS3_UP_LS0005","ADAMTS3","protein coding gene","no",2.72,0,0,0.002,19,0,0,"0(0)","MESO","no","TE_intersect_:72895289|chr4|72895289|72895343|MIR:MIR:SINE|253|-","NA","NA","NA"]
["chr4:74588413|74628661:-","chr4:74552387|74552832:-_chr4:74584015|74584094:-_chr4:74585013|74585105:-_chr4:74588332|74588413:-_chr4:74628661|74628944:-","UN_AC021180.1_UP_LS0004","AC021180.1","lncRNA gene","no",3.74,0,0,0.005,44,0,0,"0(0)","READ","no","NA","TE_intersect_:74588394|chr4|74588394|74588614|MER58A:hAT-Charlie:DNA|259|-","NA","intron_intersect_chr4:74588413|74589364"]
["chr4:76036064|76049700:-","chr4:76033682|76034816:-_chr4:76035047|76035119:-_chr4:76035216|76035342:-_chr4:76035927|76036064:-_chr4:76049700|76050364:-","UN_ART3_LS0005","ART3","protein coding gene","no",5.55,0,0,0.009,91,0,0,"0(0)","UCS","no","TE_intersect_:76044457|chr4|76044457|76049791|HERV9NC-int:ERV1:LTR|42|-","NA","intron_intersect_chr4:76041415|76057990","exon_intersect_chr4:76035927|76036197"]
["chr4:77938128|77983906:-","chr4:77915860|77918477:-_chr4:77936451|77936546:-_chr4:77938033|77938128:-_chr4:77983906|77985488:-","UN_AC112225.1_UP_LS0003","AC112225.1","pseudogene","no",3.98,0,0,0.024,229,0,0,"0(0)","ESCA;HNSC;LUSC;OV","no","TE_intersect_:77983173|chr4|77983173|77984787|SVA_D:SVA:Retroposon|33|-","TE_intersect_:77938096|chr4|77938096|77938303|MER58A:hAT-Charlie:DNA|223|+","NA","intron_intersect_chr4:77909372|77949797"]
["chr4:794741|795280:+","chr4:794642|794741:+_chr4:795280|796106:+_chr4:796221|797448:+","UN_CPLX1_LS0051","CPLX1","protein coding gene","no",2.88,0,0,0.003,24,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr4:792692|804756","intron_intersect_chr4:792692|804756"]
["chr4:80097961|80121148:-","chr4:80081130|80097629:-_chr4:80097737|80097961:-_chr4:80121148|80121277:-_chr4:80125386|80125561:-","UN_ANTXR2_LS0031","ANTXR2","protein coding gene","no",3.81,0,0,0.001,12,0,0,"0(0)","LAML","no","TE_intersect_:80120986|chr4|80120986|80121300|AluSc:Alu:SINE|105|+","NA","exon_intersect_chr4:80121148|80121277","intron_intersect_chr4:80097961|80104463"]
["chr4:83851755|83855033:-","chr4:83849812|83851755:-_chr4:83855033|83855409:-_chr4:83935623|83935730:-_chr4:84012055|84012119:-_chr4:84126143|84126238:-","UN_AC079160.1_LS0002","AC079160.1","lncRNA gene","no",2.06,0,0,0.003,24,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr4:83811645|83935623","intron_intersect_chr4:83811645|83935623"]
["chr4:84252391|84284206:-","chr4:84217119|84218988:-_chr4:84243111|84243216:-_chr4:84252242|84252391:-_chr4:84284206|84284326:-_chr4:84286669|84286827:-_chr4:84293220|84293409:-_chr4:84299124|84299412:-","UN_AC079160.1_LS0068","AC079160.1","lncRNA gene","no",1.31,0,0,0.006,53,0,0,"0(0)","THYM","no","TE_intersect_:84284126|chr4|84284126|84284282|MIR3:MIR:SINE|296|-","NA","exon_intersect_chr4:84284206|84284327","intron_intersect_chr4:84245488|84284206"]
["chr4:84293409|84299124:-","chr4:84217162|84218988:-_chr4:84243111|84243216:-_chr4:84284206|84284326:-_chr4:84286669|84286827:-_chr4:84293220|84293409:-_chr4:84299124|84299219:-","UN_AC021192.1_UP_LS0005","AC021192.1","lncRNA gene","no",1.19,0,0,0.055,530,0,0,"0(0)","BLCA;ESCA;HNSC;LUAD;LUSC;OV;TGCT;THYM;UCS","no","TE_intersect_:84298780|chr4|84298780|84304810|L1PA2:L1:LINE|23|+","NA","NA","exon_intersect_chr4:84293220|84293412"]
["chr4:869289|869822:+","chr4:869069|869289:+_chr4:869822|869865:+","UN_GAK_LS0054","GAK","protein coding gene","no",11.49,0,0,0.002,18,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chr4:868539|869957","exon_intersect_chr4:868539|869957"]
["chr4:87769179|87779140:+","chr4:87750431|87750567:+_chr4:87769058|87769179:+_chr4:87779140|87779290:+","UN_IBSP_UP_LS0014","IBSP","protein coding gene","no",2.32,0,0,0.007,63,0,0,"0(0)","OV","no","TE_intersect_:87769093|chr4|87769093|87775231|L1PA4:L1:LINE|47|+","NA","NA","NA"]
["chr4:89400619|89407737:+","chr4:89264298|89264412:+_chr4:89361317|89361365:+_chr4:89400568|89400619:+_chr4:89407737|89408272:+","UN_AC097478.1_UP_LS0018","AC097478.1","lncRNA gene","no",3.33,0,0,0.001,11,0,0,"0(0)","UVM","no","NA","TE_intersect_:89407579|chr4|89407579|89408192|MLT1E2:ERVL-MaLR:LTR|224|+","NA","NA"]
["chr4:8992164|9000360:+","chr4:8974578|8975203:+_chr4:8992077|8992164:+_chr4:9000360|9000427:+_chr4:9000824|9001058:+_chr4:9006948|9007236:+","UN_AC073648.6_UP_LS0004","AC073648.6","pseudogene","no",8.35,0,0,0.003,28,0,0,"0(0)","THYM","no","TE_intersect_:8992100|chr4|8992100|8993412|LTR12C:ERV1:LTR|77|-","NA","NA","NA"]
["chr4:91341835|91355561:-","chr4:91324630|91330386:-_chr4:91332599|91333104:-_chr4:91338333|91338407:-_chr4:91339992|91340107:-_chr4:91341742|91341835:-_chr4:91355561|91359193:-","UN_CCSER1_LS0152","CCSER1","protein coding gene","no",3.18,0,0,0.005,52,0,0,"0(0)","OV","no","TE_intersect_:91353597|chr4|91353597|91357139|Harlequin-int:ERV1:LTR|117|-","TE_intersect_:91341543|chr4|91341543|91341836|AluSz:Alu:SINE|154|-","intron_intersect_chr4:91325306|91598572","intron_intersect_chr4:91325306|91598572"]
["chr4:95219292|95219985:-","chr4:95162504|95169399:-_chr4:95170154|95170332:-_chr4:95182897|95183061:-_chr4:95185047|95185196:-_chr4:95202731|95202964:-_chr4:95206628|95206796:-_chr4:95216124|95216211:-_chr4:95218969|95219292:-_chr4:95219985|95220141:-","UN_UNC5C_LS0005","UNC5C","protein coding gene","yes",1.65,0,0,0.004,38,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr4:95219985|95220176","exon_intersect_chr4:95218969|95219313"]
["chr4:9731833|9749084:-","chr4:9730566|9731833:-_chr4:9749084|9749250:-_chr4:9749730|9750297:-","UN_RF00017_UP_LS0283","RF00017","small non-coding RNA gene","no",2.95,0,0,0.004,34,0,0,"0(0)","TGCT","no","NA","TE_intersect_:9731773|chr4|9731773|9732691|LTR5_Hs:ERVK:LTR|120|-","NA","NA"]
["chr5:100247391|100247470:+","chr5:100247000|100247391:+_chr5:100247470|100247787:+","UN_AC113385.2_UP_LS0002","AC113385.2","pseudogene","no",2.08,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr5:10489939|10490300:-","chr5:10486317|10486918:-_chr5:10488731|10488826:-_chr5:10489860|10489939:-_chr5:10490300|10490384:-_chr5:10491723|10493473:-_chr5:10493863|10494092:-_chr5:10495274|10495313:-_chr5:10501205|10502715:-","UN_ROPN1L-AS1_UP_LS0014","ROPN1L-AS1","lncRNA gene","no",3.34,0,0,0.008,78,0,0,"0(0)","CHOL;KIRC;KIRP","no","NA","NA","NA","NA"]
["chr5:1065478|1067124:-","chr5:1057528|1057649:-_chr5:1060344|1060451:-_chr5:1063844|1063975:-_chr5:1064083|1064252:-_chr5:1065283|1065478:-_chr5:1067124|1067390:-","UN_SLC12A7_LS0093","SLC12A7","protein coding gene","no",3.07,0,0,0.003,27,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr5:1065478|1073633","intron_intersect_chr5:1065478|1073633"]
["chr5:1082831|1083012:+","chr5:1081742|1082197:+_chr5:1082531|1082831:+_chr5:1083012|1083745:+","UN_SLC12A7_LS0156","SLC12A7","protein coding gene","no",2.91,0,0,0.006,53,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr5:1081744|1083745","intron_intersect_chr5:1081744|1083745"]
["chr5:109451753|109455676:+","chr5:109451441|109451753:+_chr5:109455676|109455919:+_chr5:109466056|109466186:+_chr5:109469242|109470229:+","UN_AC091917.3_UP_LS0002","AC091917.3","lncRNA gene","no",2,0,0,0.006,54,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr5:111290004|111302211:-","chr5:111277517|111277580:-_chr5:111282893|111283036:-_chr5:111289895|111290004:-_chr5:111302211|111302567:-","UN_CAMK4_LS0006","CAMK4","protein coding gene","no",2.66,0,0,0.079,756,0,0,"0(0)","BLCA;CESC;ESCA;HNSC;LUAD;LUSC;OV;STAD;THYM;UCS","no","NA","TE_intersect_:111289460|chr5|111289460|111290344|ERVL-E-int:ERVL:LTR|330|-","exon_intersect_chr5:111302211|111302567","intron_intersect_chr5:111283036|111302211"]
["chr5:113739723|113772096:-","chr5:113737440|113739723:-_chr5:113772096|113772229:-_chr5:113776427|113776646:-_chr5:113776743|113776862:-_chr5:113777216|113777260:-","UN_MCC_UP_LS0003","MCC","protein coding gene","yes",3.21,0,0,0.018,171,0,0,"0(0)","ACC;OV","no","TE_intersect_:113771994|chr5|113771994|113773193|HERV4_I-int:ERV1:LTR|84|-","NA","NA","NA"]
["chr5:116773228|116806891:+","chr5:116764420|116773228:+_chr5:116806891|116807147:+_chr5:116808097|116808204:+_chr5:116809494|116809704:+_chr5:116812470|116812533:+_chr5:116832630|116832913:+_chr5:116835486|116835590:+_chr5:116885326|116885426:+_chr5:116912266|116912305:+_chr5:116917204|116917325:+_chr5:116919188|116919284:+_chr5:116919799|116919954:+_chr5:116941210|116941263:+_chr5:116942926|116946072:+","UN_AC093534.2_UP_LS0005","AC093534.2","lncRNA gene","no",1.52,0,0,0.003,27,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr5:116919284|116941210:+","chr5:116885323|116885426:+_chr5:116912266|116912305:+_chr5:116917208|116917325:+_chr5:116919188|116919284:+_chr5:116941210|116941263:+_chr5:116942926|116943098:+_chr5:116946609|116947684:+","UN_AC093534.2_UP_LS0034","AC093534.2","lncRNA gene","no",6.82,0,0,0.002,18,0,0,"0(0)","TGCT","no","NA","TE_intersect_:116941162|chr5|116941162|116941312|MIR3:MIR:SINE|254|-","NA","NA"]
["chr5:118973861|118973998:+","chr5:118973573|118973861:+_chr5:118973998|118974906:+","UN_DTWD2_LS0059","DTWD2","protein coding gene","no",1.1,0.04,0,0.003,31,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr5:118973796|118974122","exon_intersect_chr5:118973796|118974122"]
["chr5:120676919|120685954:+","chr5:120617137|120617192:+_chr5:120618442|120618565:+_chr5:120672016|120672228:+_chr5:120676769|120676919:+_chr5:120685954|120686431:+","UN_PRR16_LS0016","PRR16","protein coding gene","no",3.34,0,0,0.005,52,0,0,"0(0)","PRAD","no","TE_intersect_:120676876|chr5|120676876|120677178|MamRep4096:hAT-Tip100:DNA|266|+","NA","intron_intersect_chr5:120658371|120685954","exon_intersect_chr5:120685954|120687332"]
["chr5:122629424|122641133:-","chr5:122628952|122629424:-_chr5:122641133|122641237:-_chr5:122649545|122649625:-_chr5:122697171|122697347:-","UN_LINC02201_LS0001","LINC02201","lncRNA gene","no",8,0,0,0.006,54,0,0,"0(0)","SARC","no","TE_intersect_:122640898|chr5|122640898|122641319|MSTC:ERVL-MaLR:LTR|174|+","NA","exon_intersect_chr5:122641133|122641237","intron_intersect_chr5:122629424|122638889"]
["chr5:124306291|124314317:-","chr5:124059794|124059948:-_chr5:124062418|124062510:-_chr5:124306176|124306291:-_chr5:124314317|124314378:-_chr5:124386229|124386273:-_chr5:124404954|124405079:-","UN_LINC01170_LS0031","LINC01170","lncRNA gene","no",3.26,0,0,0.005,48,0,0,"0(0)","THCA","no","TE_intersect_:124313857|chr5|124313857|124314381|MER44B:TcMar-Tigger:DNA|157|+","TE_intersect_:124304231|chr5|124304231|124307204|HERVH-int:ERV1:LTR|109|+","exon_intersect_chr5:124314317|124314378","intron_intersect_chr5:124306291|124313590"]
["chr5:124975383|124980204:+","chr5:124975040|124975383:+_chr5:124980204|124986568:+","UN_LINC02240_LS0028","LINC02240","lncRNA gene","no",2.42,0,0,0.004,40,0,0,"0(0)","DLBC","no","TE_intersect_:124975319|chr5|124975319|124976654|LTR12C:ERV1:LTR|130|-","NA","NA","NA"]
["chr5:127565539|127569226:-","chr5:127561127|127565539:-_chr5:127569226|127569704:-","UN_HNRNPKP1_UP_LS0001","HNRNPKP1","pseudogene","no",3.25,0,0,0.002,17,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr5:129528677|129532716:+","chr5:129460319|129460482:+_chr5:129461102|129461757:+_chr5:129509077|129509242:+_chr5:129526284|129526456:+_chr5:129527748|129527831:+_chr5:129528520|129528677:+_chr5:129532716|129533406:+","UN_ADAMTS19_LS0006","ADAMTS19","protein coding gene","no",9.41,0,0,0.006,59,0,0,"0(0)","PCPG;TGCT","no","NA","TE_intersect_:129532264|chr5|129532264|129532816|L1ME2:L1:LINE|237|+","intron_intersect_chr5:129528677|129551864","intron_intersect_chr5:129528677|129551864"]
["chr5:132003811|132004251:+","chr5:132003592|132003811:+_chr5:132004251|132004458:+_chr5:132006320|132007022:+","UN_ACSL6_LS0018","ACSL6","protein coding gene","no",1,0,0,0.003,32,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr5:132003811|132006320","intron_intersect_chr5:132003811|132006320"]
["chr5:133993018|134070842:-","chr5:133971952|133972862:-_chr5:133973791|133973848:-_chr5:133975871|133976021:-_chr5:133980729|133980956:-_chr5:133990855|133990907:-_chr5:133991002|133991154:-_chr5:133992306|133992355:-_chr5:133992946|133993018:-_chr5:134070842|134071529:-","UN_C5orf15_UP_LS0002","C5orf15","protein coding gene","no",7.6,0,0,0.006,56,0,0,"0(0)","THYM","no","TE_intersect_:134070787|chr5|134070787|134070942|L1ME4a:L1:LINE|278|-","NA","NA","intron_intersect_chr5:133993018|134004487"]
["chr5:135324240|135328710:+","chr5:135324037|135324240:+_chr5:135328710|135334161:+_chr5:135334937|135335249:+_chr5:135337931|135338013:+_chr5:135343155|135344688:+","UN_C5orf66_LS0034","C5orf66","lncRNA gene","no",2.16,0,0,0.003,33,0,0,"0(0)","LIHC","no","NA","NA","intron_intersect_chr5:135296589|135333758","intron_intersect_chr5:135296589|135333758"]
["chr5:136198454|136198549:-","chr5:136198265|136198454:-_chr5:136198549|136198678:-_chr5:136199141|136199211:-_chr5:136204948|136205198:-","UN_SMIM32_UP_LS0001","SMIM32","protein coding gene","no",7.34,0,0,0.009,88,0,0,"0(0)","CHOL;GBM","no","TE_intersect_:136198326|chr5|136198326|136198555|LTR16B1:ERVL:LTR|236|-","TE_intersect_:136198326|chr5|136198326|136198555|LTR16B1:ERVL:LTR|236|-","NA","NA"]
["chr5:136544282|136544325:+","chr5:136540981|136544282:+_chr5:136544325|136545063:+","UN_AC109439.2_UP_LS0045","AC109439.2","lncRNA gene","no",113.36,0,0,0.002,21,0,0,"0(0)","ESCA","no","TE_intersect_:136541752|chr5|136541752|136544965|HERVH-int:ERV1:LTR|102|-","TE_intersect_:136541752|chr5|136541752|136544965|HERVH-int:ERV1:LTR|102|-","NA","NA"]
["chr5:137753442|137754141:+","chr5:137752936|137753050:+_chr5:137753132|137753442:+_chr5:137754141|137754363:+","UN_HNRNPA0_LS0128","HNRNPA0","protein coding gene","no",3.59,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr5:137745651|137754376","exon_intersect_chr5:137745651|137754376"]
["chr5:138398392|138399862:+","chr5:138386191|138386621:+_chr5:138391013|138392261:+_chr5:138393171|138393372:+_chr5:138398178|138398392:+_chr5:138399862|138400012:+_chr5:138415132|138415239:+_chr5:138417483|138417610:+_chr5:138418953|138419232:+_chr5:138420706|138420962:+_chr5:138424075|138424341:+_chr5:138425411|138425582:+_chr5:138426975|138427065:+_chr5:138427189|138427319:+_chr5:138427967|138428086:+_chr5:138429826|138429965:+_chr5:138430249|138430425:+_chr5:138431425|138431559:+_chr5:138435620|138437027:+","UN_KDM3B_LS0026","KDM3B","protein coding gene","yes",9.52,0,0,0.004,40,0,0,"0(0)","PAAD","no","NA","NA","intron_intersect_chr5:138398392|138399860","exon_intersect_chr5:138399860|138400012"]
["chr5:139402813|139403944:-","chr5:139401525|139401825:-_chr5:139401915|139402045:-_chr5:139402628|139402813:-_chr5:139403944|139404050:-","UN_SPATA24_LS0007","SPATA24","protein coding gene","no",2.71,0,0,0.002,15,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chr5:139403944|139404088","intron_intersect_chr5:139402693|139403944"]
["chr5:139536604|139536739:-","chr5:139526610|139536604:-_chr5:139536739|139555364:-","UN_UBE2D2_LS0091","UBE2D2","protein coding gene","no",7.77,0,0,0.012,115,0,0,"0(0)","OV;UCEC","no","TE_intersect_:139536654|chr5|139536654|139536789|AluSx1:Alu:SINE|100|-","TE_intersect_:139536366|chr5|139536366|139536654|AluSx:Alu:SINE|135|-","intron_intersect_chr5:139526612|139554900","intron_intersect_chr5:139526612|139554900"]
["chr5:1402259|1402922:-","chr5:1394029|1394758:-_chr5:1400915|1400986:-_chr5:1401160|1402259:-_chr5:1402922|1403089:-_chr5:1406188|1406288:-_chr5:1409026|1409125:-_chr5:1409721|1409849:-_chr5:1411243|1411355:-_chr5:1414691|1414815:-_chr5:1416098|1416201:-_chr5:1420569|1420703:-_chr5:1421876|1422014:-_chr5:1432464|1432698:-_chr5:1441359|1441490:-_chr5:1442912|1443242:-_chr5:1445348|1445426:-","UN_SLC6A3_LS0010","SLC6A3","protein coding gene","no",6.36,0.12,0,0.029,276,0.003,2,"0(0)","KIRC","no","NA","NA","exon_intersect_chr5:1402922|1403089","intron_intersect_chr5:1401307|1402922"]
["chr5:140849827|140857378:+","chr5:140848154|140849827:+_chr5:140857378|140857647:+_chr5:140870703|140871494:+_chr5:140978949|140979007:+_chr5:140982475|140982563:+_chr5:141009627|141009691:+","UN_PCDHA9_LS0004","PCDHA9","protein coding gene","no",0.58,0,0,0.006,53,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr5:140847463|140854671","exon_intersect_chr5:140855883|140871600"]
["chr5:141136886|141157454:+","chr5:141135229|141136886:+_chr5:141157454|141159061:+","UN_AC244517.2_LS0042","AC244517.2","lncRNA gene","no",1.45,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr5:141136683|141137183","exon_intersect_chr5:141155996|141159061"]
["chr5:141188809|141194044:-","chr5:141188419|141188809:-_chr5:141194044|141194088:-","UN_AC244517.4_LS0043","AC244517.4","lncRNA gene","no",1.51,0,0,0.001,14,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr5:141194044|141194088","exon_intersect_chr5:141187019|141191541"]
["chr5:141236090|141247115:-","chr5:141210201|141210256:-_chr5:141224855|141225007:-_chr5:141236057|141236090:-_chr5:141247115|141247155:-","UN_AC244517.4_UP_LS0006","AC244517.4","lncRNA gene","no",3.08,0,0,0.013,123,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chr5:141245349|141249365","exon_intersect_chr5:141234333|141237529"]
["chr5:141991920|141993580:-","chr5:141991236|141991920:-_chr5:141993580|141993700:-_chr5:141995108|141996343:-","UN_GNPDA1_LS0001","GNPDA1","protein coding gene","no",2.72,0,0,0.008,77,0,0,"0(0)","TGCT","no","TE_intersect_:141993400|chr5|141993400|141993583|L2a:L2:LINE|305|-","NA","intron_intersect_chr5:141991920|142000669","intron_intersect_chr5:141991920|142000669"]
["chr5:143259293|143284699:+","chr5:143259149|143259293:+_chr5:143284699|143284791:+_chr5:143293120|143293257:+_chr5:143310104|143310199:+_chr5:143311816|143312353:+","UN_RPL7P21_UP_LS0002","RPL7P21","pseudogene","no",11.01,0,0,0.007,71,0,0,"0(0)","LUAD;TGCT","no","NA","NA","NA","intron_intersect_chr5:143282725|143295460"]
["chr5:143284791|143293120:+","chr5:143259149|143259293:+_chr5:143284699|143284791:+_chr5:143293120|143293257:+_chr5:143310104|143310199:+_chr5:143311816|143312353:+","UN_NR3C1_LS0013","NR3C1","protein coding gene","no",8.2,0,0,0.007,70,0,0,"0(0)","LUAD","no","TE_intersect_:143284736|chr5|143284736|143285015|L1MEc:L1:LINE|290|+","TE_intersect_:143293109|chr5|143293109|143293523|L1PB1:L1:LINE|82|+","intron_intersect_chr5:143282725|143295460","intron_intersect_chr5:143282725|143295460"]
["chr5:146940504|147035169:-","chr5:146701086|146701142:-_chr5:146878002|146878195:-_chr5:146940462|146940504:-_chr5:147035169|147035240:-_chr5:147081059|147081136:-_chr5:147081257|147081293:-","UN_PPP2R2B_LS0018","PPP2R2B","protein coding gene","no",1.5,0,0,0.003,30,0,0,"0(0)","LGG","no","TE_intersect_:147035084|chr5|147035084|147035452|THE1D:ERVL-MaLR:LTR|132|-","NA","exon_intersect_chr5:147035169|147035240","intron_intersect_chr5:146922576|147035169"]
["chr5:147257687|147278124:+","chr5:147257471|147257687:+_chr5:147278124|147278179:+_chr5:147279247|147279398:+_chr5:147323898|147324071:+_chr5:147343006|147343043:+_chr5:147351065|147351152:+","UN_STK32A_LS0008","STK32A","protein coding gene","no",3.45,0,0,0.003,26,0,0,"0(0)","UVM","no","TE_intersect_:147256811|chr5|147256811|147259543|HERVIP10FH-int:ERV1:LTR|70|-","NA","intron_intersect_chr5:147240159|147278124","exon_intersect_chr5:147278124|147278179"]
["chr5:147869876|147872177:+","chr5:147869777|147869876:+_chr5:147872177|147872321:+_chr5:147881446|147881648:+_chr5:147882027|147882190:+","UN_AC011352.3_UP_LS0008","AC011352.3","lncRNA gene","no",2.15,0,0,0.004,43,0,0,"0(0)","TGCT","no","TE_intersect_:147869835|chr5|147869835|147870286|LTR7:ERV1:LTR|65|-","TE_intersect_:147871298|chr5|147871298|147874075|HERVH-int:ERV1:LTR|103|-","NA","exon_intersect_chr5:147872018|147872321"]
["chr5:147901773|147902326:-","chr5:147901529|147901773:-_chr5:147902326|147902450:-_chr5:147906432|147906490:-","UN_C5orf46_LS0006","C5orf46","protein coding gene","no",2.12,0,0,0.007,67,0,0,"0(0)","KIRC","no","TE_intersect_:147902171|chr5|147902171|147902477|AluJr:Alu:SINE|150|+","NA","intron_intersect_chr5:147901773|147906432","intron_intersect_chr5:147901773|147906432"]
["chr5:148916249|148917664:+","chr5:148915667|148915763:+_chr5:148916133|148916249:+_chr5:148917664|148917760:+_chr5:148960917|148961018:+_chr5:148967350|148967419:+_chr5:148970010|148970284:+_chr5:148970427|148970653:+","UN_AC116312.1_UP_LS0031","AC116312.1","lncRNA gene","no",1.86,0,0,0.001,11,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr5:150137801|150138323:+","chr5:150137456|150137801:+_chr5:150138323|150138418:+_chr5:150142892|150143089:+_chr5:150143995|150145894:+","UN_PDGFRB_LS0086","PDGFRB","protein coding gene","yes",1.46,0,0,0.003,25,0,0,"0(0)","LIHC","no","TE_intersect_:150137761|chr5|150137761|150137854|MIRc:MIR:SINE|272|-","NA","intron_intersect_chr5:150137450|150153411","intron_intersect_chr5:150137450|150153411"]
["chr5:150693005|150693219:-","chr5:150690792|150691881:-_chr5:150692895|150693005:-_chr5:150693219|150693307:-_chr5:150694076|150694240:-_chr5:150695506|150695706:-_chr5:150696533|150696705:-_chr5:150696791|150696891:-_chr5:150698499|150698631:-_chr5:150699242|150699271:-_chr5:150700444|150700497:-","UN_RBM22_LS0005","RBM22","protein coding gene","no",7.55,0,0,0.006,62,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr5:150693219|150693307","exon_intersect_chr5:150692895|150693026"]
["chr5:151212889|151223476:+","chr5:151212150|151212259:+_chr5:151212759|151212889:+_chr5:151223476|151223923:+","UN_GM2A_LS0005","GM2A","protein coding gene","no",4.39,0,0,0.011,103,0,0,"0(0)","DLBC;THYM","no","TE_intersect_:151212475|chr5|151212475|151213041|L3:CR1:LINE|288|+","TE_intersect_:151223371|chr5|151223371|151223525|MER5A1:hAT-Charlie:DNA|221|-","intron_intersect_chr5:151212889|151215566","intron_intersect_chr5:151215686|151223923"]
["chr5:155346840|155348422:-","chr5:155345002|155346840:-_chr5:155348422|155348513:-_chr5:155349563|155349654:-_chr5:155370594|155370710:-_chr5:155411071|155411674:-","UN_AC010476.1_UP_LS0003","AC010476.1","pseudogene","no",2.37,0,0,0.006,58,0,0,"0(0)","OV","no","TE_intersect_:155348168|chr5|155348168|155348908|L1MEd:L1:LINE|247|+","TE_intersect_:155345971|chr5|155345971|155347099|L1MC4:L1:LINE|248|-","NA","NA"]
["chr5:157057955|157069359:-","chr5:157024040|157029841:-_chr5:157032854|157032887:-_chr5:157037247|157037361:-_chr5:157042627|157042682:-_chr5:157049038|157049145:-_chr5:157052361|157052654:-_chr5:157055201|157055533:-_chr5:157057898|157057955:-_chr5:157069359|157069384:-","UN_TIMD4_UP_LS0015","TIMD4","protein coding gene","no",3.91,0,0,0.009,89,0,0,"0(0)","READ;TGCT","no","NA","NA","NA","exon_intersect_chr5:157057898|157058476"]
["chr5:15894233|15900396:-","chr5:15845665|15846540:-_chr5:15850610|15851300:-_chr5:15859057|15859255:-_chr5:15862581|15862696:-_chr5:15868968|15869138:-_chr5:15884052|15884169:-_chr5:15893819|15893926:-_chr5:15894167|15894233:-_chr5:15900396|15900582:-","UN_FBXL7_LS0054","FBXL7","protein coding gene","no",3.49,0,0,0.004,41,0,0,"0(0)","PRAD","no","NA","TE_intersect_:15894006|chr5|15894006|15894288|AluSp:Alu:SINE|121|+","intron_intersect_chr5:15616072|15927888","intron_intersect_chr5:15616072|15927888"]
["chr5:159491574|159504855:-","chr5:159491515|159491574:-_chr5:159504855|159504936:-_chr5:159511585|159511721:-","UN_AC008703.1_LS0013","AC008703.1","lncRNA gene","no",3.05,0.06,0,0.005,46,0.001,1,"0(0)","CHOL","no","NA","TE_intersect_:159491376|chr5|159491376|159491976|MER115:hAT-Tip100:DNA|284|-","NA","NA"]
["chr5:162036954|162061524:+","chr5:162031768|162036954:+_chr5:162061524|162061909:+_chr5:162093828|162093979:+_chr5:162095495|162095562:+_chr5:162097638|162097858:+_chr5:162101235|162101317:+_chr5:162103889|162104026:+_chr5:162142164|162142316:+_chr5:162149108|162149313:+_chr5:162153093|162155691:+","UN_GABRG2_LS0005","GABRG2","protein coding gene","no",4.86,0,0,0.033,312,0,0,"0(0)","BLCA;ESCA;LUSC;OV;SKCM;TGCT;THYM;UCS","no","TE_intersect_:162036953|chr5|162036953|162037352|L1ME3E:L1:LINE|333|+","TE_intersect_:162061164|chr5|162061164|162061540|L1ME2:L1:LINE|266|-","NA","NA"]
["chr5:167287819|167291942:-","chr5:167287320|167287819:-_chr5:167291942|167294400:-_chr5:167297463|167297550:-_chr5:167301074|167301175:-_chr5:167303123|167303372:-","UN_TENM2_LS0001","TENM2","protein coding gene","no",56.44,0,0,0.003,33,0,0,"0(0)","TGCT","no","TE_intersect_:167291857|chr5|167291857|167292221|THE1B:ERVL-MaLR:LTR|99|-","TE_intersect_:167287802|chr5|167287802|167287948|MER135:DNA:DNA|255|-","intron_intersect_chr5:167287819|167294251","intron_intersect_chr5:167287819|167294251"]
["chr5:16983270|16988376:-","chr5:16982982|16983270:-_chr5:16988376|16988496:-_chr5:16994203|16994319:-_chr5:17031559|17032007:-","UN_RNU6-660P_UP_LS0004","RNU6-660P","small non-coding RNA gene","no",3.19,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:16988214|chr5|16988214|16988528|AluJb:Alu:SINE|162|+","NA","NA","NA"]
["chr5:170747193|170749655:-","chr5:170744868|170746111:-_chr5:170746911|170747193:-_chr5:170749655|170749838:-","UN_AC008514.1_LS0006","AC008514.1","lncRNA gene","no",1.28,0,0,0.002,23,0,0,"0(0)","CHOL","no","NA","TE_intersect_:170747079|chr5|170747079|170747387|AluJr:Alu:SINE|156|+","intron_intersect_chr5:170747193|170753513","intron_intersect_chr5:170747193|170753513"]
["chr5:17121719|17123764:-","chr5:17121605|17121719:-_chr5:17123764|17123853:-","UN_BASP1_LS0024","BASP1","protein coding gene","yes",8.32,0,0,0.007,64,0,0,"0(0)","SKCM","no","TE_intersect_:17123680|chr5|17123680|17124049|THE1D:ERVL-MaLR:LTR|111|-","TE_intersect_:17121580|chr5|17121580|17121750|AluSx1:Alu:SINE|98|+","intron_intersect_chr5:17117686|17130028","intron_intersect_chr5:17117686|17130028"]
["chr5:17347312|17354036:-","chr5:17347302|17347312:-_chr5:17354036|17354424:-","UN_BASP1-AS1_UP_LS0004","BASP1-AS1","lncRNA gene","no",3.23,0,0,0.004,42,0,0,"0(0)","UCEC","no","NA","TE_intersect_:17347091|chr5|17347091|17347540|MLT1D:ERVL-MaLR:LTR|196|-","exon_intersect_chr5:17353695|17354624","NA"]
["chr5:175349906|175360784:+","chr5:175347326|175347577:+_chr5:175347689|175349906:+_chr5:175360784|175364660:+","UN_SFXN1_UP_LS0008","SFXN1","protein coding gene","no",4.09,0,0,0.008,77,0,0,"0(0)","BLCA;PAAD;STAD","no","NA","NA","NA","NA"]
["chr5:176040466|176040687:+","chr5:176036623|176036789:+_chr5:176040307|176040466:+_chr5:176040687|176040847:+_chr5:176042725|176042878:+","UN_AC139491.3_UP_LS0004","AC139491.3","lncRNA gene","no",13.41,0,0,0.003,31,0,0,"0(0)","UCS","no","NA","NA","NA","NA"]
["chr5:176629863|176630280:-","chr5:176621214|176621303:-_chr5:176626398|176626516:-_chr5:176626720|176626761:-_chr5:176629534|176629663:-_chr5:176629809|176629863:-_chr5:176630280|176630529:-","UN_SNCB_LS0003","SNCB","protein coding gene","no",2.93,0,0,0.03,288,0,0,"0(0)","ACC;GBM;LGG;PCPG;SKCM;TGCT;UVM","no","NA","NA","exon_intersect_chr5:176630280|176630556","exon_intersect_chr5:176629534|176630048"]
["chr5:177073836|177086787:+","chr5:177022735|177022913:+_chr5:177041126|177041229:+_chr5:177041778|177041870:+_chr5:177044389|177044533:+_chr5:177050751|177050936:+_chr5:177062058|177062151:+_chr5:177064512|177073836:+_chr5:177086787|177086821:+","UN_FGFR4_UP_LS0002","FGFR4","protein coding gene","yes",11.39,0,0,0.006,55,0,0,"0(0)","LAML","no","TE_intersect_:177073720|chr5|177073720|177074199|MLT1H:ERVL-MaLR:LTR|246|+","NA","intron_intersect_chr5:177065985|177079382","NA"]
["chr5:177458705|177459098:-","chr5:177456936|177457503:-_chr5:177457655|177457757:-_chr5:177458058|177458705:-_chr5:177459098|177459268:-_chr5:177460432|177460555:-_chr5:177460644|177460703:-_chr5:177466772|177466835:-_chr5:177466911|177467062:-_chr5:177467255|177467332:-_chr5:177467481|177467627:-_chr5:177467743|177467817:-_chr5:177468108|177468220:-_chr5:177468844|177468899:-_chr5:177473436|177473613:-","UN_DBN1_LS0081","DBN1","protein coding gene","no",9.98,0,0,0.004,35,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr5:177459098|177459268","exon_intersect_chr5:177456608|177458707"]
["chr5:178149688|178149804:+","chr5:178131025|178131376:+_chr5:178138108|178138258:+_chr5:178142583|178142728:+_chr5:178142852|178142992:+_chr5:178143627|178143727:+_chr5:178143942|178144108:+_chr5:178146114|178146279:+_chr5:178147533|178147635:+_chr5:178147729|178147883:+_chr5:178147969|178149688:+_chr5:178149804|178150638:+","UN_RMND5B_LS0047","RMND5B","protein coding gene","no",3.27,0,0,0.003,32,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr5:178149460|178149838","exon_intersect_chr5:178149460|178149838"]
["chr5:178751893|178754043:-","chr5:178750792|178751893:-_chr5:178754043|178754150:-","UN_ZNF354A_UP_LS0004","ZNF354A","protein coding gene","no",4.45,0,0,0.01,97,0,0,"0(0)","THYM;UCS","no","NA","NA","NA","NA"]
["chr5:178803761|178811174:-","chr5:178778125|178778692:-_chr5:178787068|178787126:-_chr5:178793314|178793437:-_chr5:178797531|178797611:-_chr5:178803679|178803761:-_chr5:178811174|178811286:-_chr5:178814898|178815008:-_chr5:178818094|178821774:-","UN_AACSP1_LS0023","AACSP1","pseudogene","no",2.37,0,0,0.012,116,0,0,"0(0)","ESCA;THYM","no","TE_intersect_:178810343|chr5|178810343|178811698|L1MA6:L1:LINE|280|+","NA","exon_intersect_chr5:178811174|178811286","intron_intersect_chr5:178797611|178811174"]
["chr5:179967010|179967666:-","chr5:179955480|179955669:-_chr5:179963471|179963564:-_chr5:179966806|179967010:-_chr5:179967666|179967701:-","UN_RNF130_LS0010","RNF130","protein coding gene","no",3.33,0,0,0.004,35,0,0,"0(0)","DLBC;UVM","no","NA","NA","intron_intersect_chr5:179967010|179970410","intron_intersect_chr5:179967010|179970410"]
["chr5:1811062|1812218:+","chr5:1801421|1801549:+_chr5:1802321|1802374:+_chr5:1810998|1811062:+_chr5:1812218|1812382:+_chr5:1814339|1814461:+_chr5:1815851|1816054:+","UN_NDUFS6_LS0021","NDUFS6","protein coding gene","no",4.14,0,0,0.003,25,0,0,"0(0)","CHOL","no","TE_intersect_:1810886|chr5|1810886|1811314|Tigger2a:TcMar-Tigger:DNA|170|+","TE_intersect_:1812032|chr5|1812032|1812378|MSTD:ERVL-MaLR:LTR|201|-","intron_intersect_chr5:1802374|1814339","intron_intersect_chr5:1802374|1814339"]
["chr5:181320552|181321652:+","chr5:181316368|181316486:+_chr5:181317331|181320552:+_chr5:181321652|181321816:+","UN_AC138035.1_LS0031","AC138035.1","lncRNA gene","no",7.94,0,0,0.004,43,0,0,"0(0)","ESCA","no","TE_intersect_:181320214|chr5|181320214|181320634|MER1A:hAT-Charlie:DNA|148|+","TE_intersect_:181321623|chr5|181321623|181321811|AluJb:Alu:SINE|191|-","intron_intersect_chr5:181320552|181320646","exon_intersect_chr5:181321652|181321842"]
["chr5:2069343|2071599:+","chr5:1933863|1933985:+_chr5:2066526|2067585:+_chr5:2067669|2067962:+_chr5:2068883|2068971:+_chr5:2069144|2069343:+_chr5:2071599|2071652:+_chr5:2094063|2096642:+_chr5:2097239|2097387:+_chr5:2097736|2097792:+_chr5:2100079|2103200:+_chr5:2103520|2103783:+_chr5:2114343|2114537:+_chr5:2118030|2120518:+","UN_RF00019_UP_LS1587","RF00019","small non-coding RNA gene","no",2.38,0,0,0.002,15,0,0,"0(0)","THYM","no","NA","TE_intersect_:2071376|chr5|2071376|2071728|THE1A:ERVL-MaLR:LTR|77|+","NA","NA"]
["chr5:21098964|21113745:-","chr5:21098663|21098964:-_chr5:21113745|21113846:-_chr5:21172523|21172604:-_chr5:21176270|21176360:-_chr5:21271715|21271779:-_chr5:21329566|21329630:-_chr5:21341185|21341332:-","UN_AC138938.1_UP_LS0040","AC138938.1","pseudogene","no",2.3,0,0,0.004,41,0,0,"0(0)","TGCT","no","TE_intersect_:21113478|chr5|21113478|21114056|MER4-int:ERV1:LTR|103|-","TE_intersect_:21098933|chr5|21098933|21099075|MLT1F2:ERVL-MaLR:LTR|289|+","NA","NA"]
["chr5:22752921|22755016:+","chr5:22674298|22674426:+_chr5:22752760|22752921:+_chr5:22755016|22755086:+_chr5:22757051|22757112:+_chr5:22758041|22758945:+","UN_CDH12_LS0040","CDH12","protein coding gene","no",5.46,0,0,0.003,27,0,0,"0(0)","UCS","no","TE_intersect_:22752872|chr5|22752872|22753251|L2a:L2:LINE|351|-","NA","intron_intersect_chr5:22638994|22853058","intron_intersect_chr5:22638994|22853058"]
["chr5:24141317|24163064:-","chr5:24133353|24135387:-_chr5:24139888|24139986:-_chr5:24140640|24140911:-_chr5:24141008|24141317:-_chr5:24163064|24163178:-","UN_C5orf17_LS0029","C5orf17","lncRNA gene","no",5.27,0,0,0.002,22,0,0,"0(0)","CHOL","no","NA","TE_intersect_:24141043|chr5|24141043|24141370|MER61A:ERV1:LTR|161|+","intron_intersect_chr5:23994603|24170370","intron_intersect_chr5:23994603|24170370"]
["chr5:25569092|25572508:+","chr5:25542409|25542430:+_chr5:25542646|25542790:+_chr5:25567672|25567829:+_chr5:25569045|25569092:+_chr5:25572508|25572560:+_chr5:25581459|25581697:+","UN_AC022418.1_UP_LS0019","AC022418.1","lncRNA gene","no",3.25,0,0,0.007,64,0,0,"0(0)","THYM","no","TE_intersect_:25569026|chr5|25569026|25569327|LTR12F:ERV1:LTR|248|-","TE_intersect_:25571850|chr5|25571850|25572520|MER4B-int:ERV1:LTR|145|+","NA","NA"]
["chr5:27488342|27502034:-","chr5:27460084|27466065:-_chr5:27488153|27488342:-_chr5:27502034|27502267:-","UN_AC113355.1_UP_LS0004","AC113355.1","lncRNA gene","no",8.42,0,0,0.004,36,0,0,"0(0)","STAD","no","TE_intersect_:27501951|chr5|27501951|27502320|THE1D:ERVL-MaLR:LTR|125|-","NA","NA","intron_intersect_chr5:27486146|27489282"]
["chr5:30790659|30849494:-","chr5:30788692|30788821:-_chr5:30790505|30790659:-_chr5:30849494|30849591:-_chr5:30849990|30850141:-","UN_AC114300.1_UP_LS0025","AC114300.1","pseudogene","no",6.72,0,0,0.004,38,0,0,"0(0)","CHOL","no","TE_intersect_:30849339|chr5|30849339|30849647|AluSq:Alu:SINE|107|+","NA","NA","NA"]
["chr5:30825836|30844957:+","chr5:30823241|30823740:+_chr5:30825749|30825836:+_chr5:30844957|30847180:+","UN_RPL19P11_UP_LS0012","RPL19P11","pseudogene","no",2.68,0,0,0.015,140,0,0,"0(0)","ESCA;LUSC;THYM","no","TE_intersect_:30823979|chr5|30823979|30827861|L1PA16:L1:LINE|142|-","NA","NA","NA"]
["chr5:33954504|33959291:-","chr5:33945866|33947374:-_chr5:33951554|33951677:-_chr5:33954361|33954504:-_chr5:33959291|33959449:-_chr5:33963691|33964016:-_chr5:33982236|33982412:-_chr5:33984199|33984562:-","UN_SLC45A2_LS0006","SLC45A2","protein coding gene","no",4.74,0,0,0.008,72,0,0,"0(0)","SKCM","no","TE_intersect_:33959276|chr5|33959276|33959336|L1M5:L1:LINE|207|-","NA","intron_intersect_chr5:33954504|33963642","intron_intersect_chr5:33954504|33963642"]
["chr5:33959449|33963691:-","chr5:33945866|33947374:-_chr5:33951554|33951677:-_chr5:33954361|33954504:-_chr5:33959291|33959449:-_chr5:33963691|33964016:-_chr5:33982236|33982412:-_chr5:33984199|33984562:-","UN_SLC45A2_LS0009","SLC45A2","protein coding gene","no",5.79,0,0,0.005,44,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr5:33963642|33964016","intron_intersect_chr5:33954504|33963642"]
["chr5:34305611|34305965:-","chr5:34305443|34305611:-_chr5:34305965|34306011:-_chr5:34306241|34306371:-_chr5:34306550|34307794:-","UN_AC138409.2_UP_LS0011","AC138409.2","pseudogene","no",1.83,0,0,0.002,16,0,0,"0(0)","ESCA","no","TE_intersect_:34305033|chr5|34305033|34307752|SVA_F:SVA:Retroposon|86|-","TE_intersect_:34305033|chr5|34305033|34307752|SVA_F:SVA:Retroposon|86|-","NA","NA"]
["chr5:35921120|35921998:-","chr5:35904323|35904646:-_chr5:35909866|35910075:-_chr5:35910366|35910543:-_chr5:35920984|35921120:-_chr5:35921998|35922079:-","UN_CAPSL_LS0004","CAPSL","protein coding gene","no",5.29,0,0,0.008,75,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr5:35921120|35938541","intron_intersect_chr5:35921120|35938541"]
["chr5:37861320|37864757:+","chr5:37844993|37845227:+_chr5:37861261|37861320:+_chr5:37864757|37872465:+_chr5:37874107|37874266:+_chr5:37874705|37878044:+","UN_GDNF-AS1_LS0028","GDNF-AS1","lncRNA gene","no",2.91,0.03,0,0.008,75,0.001,1,"0(0)","SKCM;UVM","no","TE_intersect_:37861246|chr5|37861246|37861362|MIRc:MIR:SINE|276|-","NA","intron_intersect_chr5:37840573|37869907","intron_intersect_chr5:37840573|37869907"]
["chr5:40604036|40605604:-","chr5:40511270|40513069:-_chr5:40603932|40604036:-_chr5:40605604|40605744:-","UN_TTC33_LS0012","TTC33","protein coding gene","no",2.09,0,0,0.006,54,0,0,"0(0)","GBM;LAML","no","NA","TE_intersect_:40603855|chr5|40603855|40604209|THE1A:ERVL-MaLR:LTR|74|-","NA","NA"]
["chr5:42734812|42748955:+","chr5:42734724|42734812:+_chr5:42748955|42749103:+_chr5:42750445|42750655:+_chr5:42750867|42750917:+_chr5:42751127|42751393:+","UN_CCDC152_UP_LS0001","CCDC152","protein coding gene","no",1.34,0,0,0.006,60,0,0,"0(0)","OV","no","TE_intersect_:42734714|chr5|42734714|42740780|L1PA2:L1:LINE|16|+","NA","NA","NA"]
["chr5:43124433|43125849:-","chr5:43124221|43124433:-_chr5:43125849|43125939:-_chr5:43126360|43126639:-_chr5:43191776|43191978:-","UN_ZNF131_LS0085","ZNF131","protein coding gene","no",2.73,0,0,0.005,44,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr5:43125046|43139165","exon_intersect_chr5:43123209|43125046"]
["chr5:43578460|43578501:-","chr5:43571612|43578460:-_chr5:43578501|43579200:-_chr5:43583467|43583566:-_chr5:43602778|43603063:-","UN_NNT-AS1_LS0023","NNT-AS1","lncRNA gene","no",3.25,0,0,0.004,34,0,0,"0(0)","TGCT","no","TE_intersect_:43577639|chr5|43577639|43579120|SVA_D:SVA:Retroposon|29|-","TE_intersect_:43577639|chr5|43577639|43579120|SVA_D:SVA:Retroposon|29|-","exon_intersect_chr5:43577642|43579200","exon_intersect_chr5:43577642|43579200"]
["chr5:4487978|4489482:-","chr5:4484331|4486918:-_chr5:4487266|4487405:-_chr5:4487909|4487978:-_chr5:4489482|4489601:-_chr5:4522265|4522367:-_chr5:4525698|4526024:-_chr5:4529962|4530468:-","UN_AC106799.2_LS0010","AC106799.2","lncRNA gene","no",2.43,0,0,0.005,45,0,0,"0(0)","ESCA","no","NA","TE_intersect_:4487956|chr5|4487956|4488184|MLT1D:ERVL-MaLR:LTR|227|+","intron_intersect_chr5:4481755|4512262","intron_intersect_chr5:4481755|4512262"]
["chr5:463077|463998:-","chr5:462368|462527:-_chr5:462980|463077:-_chr5:463998|464295:-_chr5:464462|464615:-","UN_EXOC3_LS0039","EXOC3","protein coding gene","no",1.38,0,0,0.005,45,0,0,"0(0)","ESCA","no","NA","TE_intersect_:462823|chr5|462823|463133|AluSp:Alu:SINE|103|+","intron_intersect_chr5:462529|464290","intron_intersect_chr5:462529|464290"]
["chr5:52685690|52745365:-","chr5:52671617|52675616:-_chr5:52685605|52685690:-_chr5:52745365|52745609:-","UN_AC022126.1_LS0004","AC022126.1","lncRNA gene","no",2.63,0,0,0.016,156,0,0,"0(0)","CESC;STAD","no","TE_intersect_:52745284|chr5|52745284|52745728|MLT2A1:ERVL:LTR|82|-","TE_intersect_:52685326|chr5|52685326|52685916|MER77:ERVL:LTR|232|-","intron_intersect_chr5:52685690|52785535","intron_intersect_chr5:52685690|52785535"]
["chr5:53248141|53251315:-","chr5:53218385|53218919:-_chr5:53247999|53248141:-_chr5:53251315|53251466:-_chr5:53256546|53256852:-","UN_MOCS2_UP_LS0008","MOCS2","protein coding gene","no",5.73,0,0,0.005,51,0,0,"0(0)","HNSC","no","TE_intersect_:53251202|chr5|53251202|53251494|Tigger3b:TcMar-Tigger:DNA|105|-","TE_intersect_:53247947|chr5|53247947|53248282|MLT1J2:ERVL-MaLR:LTR|302|-","NA","NA"]
["chr5:5487991|5489149:+","chr5:5487964|5487991:+_chr5:5489149|5490213:+","UN_ICE1_LS0061","ICE1","protein coding gene","no",2.48,0,0,0.007,67,0,0,"0(0)","TGCT","no","TE_intersect_:5487864|chr5|5487864|5488037|MIRb:MIR:SINE|322|-","NA","intron_intersect_chr5:5486819|5489149","exon_intersect_chr5:5489149|5490234"]
["chr5:56085689|56085993:-","chr5:56065428|56065619:-_chr5:56085511|56085689:-_chr5:56085993|56086243:-","UN_AC008892.1_LS0016","AC008892.1","lncRNA gene","no",4.36,0,0,0.004,41,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr5:59060187|59063085:+","chr5:58937349|58937501:+_chr5:58942562|58942628:+_chr5:59060145|59060187:+_chr5:59063085|59064620:+","UN_PDE4D_LS0019","PDE4D","protein coding gene","no",7.08,0,0,0.024,233,0,0,"0(0)","DLBC;LUSC;OV;SKCM;TGCT;UCS","no","TE_intersect_:59059863|chr5|59059863|59060398|MLT1J:ERVL-MaLR:LTR|296|+","NA","intron_intersect_chr5:59040070|59063085","exon_intersect_chr5:59063085|59063503"]
["chr5:635865|635945:-","chr5:635592|635865:-_chr5:635945|636384:-","UN_CEP72_LS0023","CEP72","protein coding gene","no",2.4,0,0,0.002,17,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr5:635584|637517","intron_intersect_chr5:635584|637517"]
["chr5:66588229|66597355:-","chr5:66585739|66588229:-_chr5:66597355|66597855:-","UN_LINC02229_UP_LS0001","LINC02229","lncRNA gene","no",1.09,0,0,0.002,15,0,0,"0(0)","THYM","no","NA","TE_intersect_:66588111|chr5|66588111|66588282|LTR67B:ERVL:LTR|317|+","intron_intersect_chr5:66597018|66622868","NA"]
["chr5:6773221|6773455:+","chr5:6771599|6773221:+_chr5:6773455|6773701:+_chr5:6775559|6776029:+_chr5:6777050|6777158:+_chr5:6777334|6777509:+_chr5:6778749|6779998:+","UN_AC122710.2_LS0007","AC122710.2","lncRNA gene","no",1.38,0,0,0.021,203,0,0,"0(0)","ESCA;GBM;LUSC;SKCM;THYM","no","TE_intersect_:6773215|chr5|6773215|6773364|MIR:MIR:SINE|331|+","NA","NA","NA"]
["chr5:69294900|69295144:-","chr5:69282477|69283034:-_chr5:69285337|69285467:-_chr5:69294793|69294900:-_chr5:69295144|69295304:-","UN_CCDC125_LS0021","CCDC125","protein coding gene","no",1.51,0,0,0.006,62,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr5:69294900|69300012","intron_intersect_chr5:69294900|69300012"]
["chr5:70139720|70140066:-","chr5:70131542|70139720:-_chr5:70140066|70157229:-","UN_AC140134.1_UP_LS0007","AC140134.1","pseudogene","no",1.1,0.04,0,0.004,35,0.003,2,"0(0)","LAML","no","NA","TE_intersect_:70139644|chr5|70139644|70139829|MIRb:MIR:SINE|324|+","NA","NA"]
["chr5:70776546|70777354:-","chr5:70755797|70776546:-_chr5:70777354|70789892:-_chr5:70790412|70828847:-_chr5:70829675|70876705:-","UN_AC139272.1_LS0004","AC139272.1","pseudogene","no",1.71,0,0,0.001,13,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr5:70751232|70785438","intron_intersect_chr5:70751232|70785438"]
["chr5:71651102|71652669:+","chr5:71602509|71602633:+_chr5:71604356|71604468:+_chr5:71626640|71626753:+_chr5:71632121|71632185:+_chr5:71634943|71635042:+_chr5:71635151|71635246:+_chr5:71641003|71641075:+_chr5:71643819|71643895:+_chr5:71646211|71646277:+_chr5:71649097|71649253:+_chr5:71650069|71650607:+_chr5:71650694|71651102:+_chr5:71652669|71652754:+_chr5:71656743|71658704:+","UN_MCCC2_LS0061","MCCC2","protein coding gene","no",22.72,0,0,0.003,27,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chr5:71650183|71652669","exon_intersect_chr5:71652669|71652754"]
["chr5:748337|840429:+","chr5:748155|748337:+_chr5:840429|840806:+","UN_TRIP13_UP_LS0001","TRIP13","protein coding gene","no",1.45,0,0,0.002,17,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr5:748156|748559","exon_intersect_chr5:839442|840650"]
["chr5:76172286|76172419:+","chr5:76170080|76172286:+_chr5:76172419|76172526:+","UN_SV2C_LS0020","SV2C","protein coding gene","no",1.04,0,0,0.004,34,0,0,"0(0)","ESCA","no","TE_intersect_:76172075|chr5|76172075|76173064|SVA_F:SVA:Retroposon|50|+","TE_intersect_:76172075|chr5|76172075|76173064|SVA_F:SVA:Retroposon|50|+","intron_intersect_chr5:76171103|76173632","intron_intersect_chr5:76171103|76173632"]
["chr5:76812471|76832690:+","chr5:76811482|76812471:+_chr5:76832690|76835315:+","UN_S100Z_UP_LS0004","S100Z","protein coding gene","no",7.14,0,0,0.011,106,0,0,"0(0)","ESCA;HNSC;LUSC","no","TE_intersect_:76811568|chr5|76811568|76813693|SVA_D:SVA:Retroposon|32|+","NA","NA","exon_intersect_chr5:76832690|76835315"]
["chr5:77042597|77042971:-","chr5:77041426|77042407:-_chr5:77042550|77042597:-_chr5:77042971|77043019:-_chr5:77043641|77044351:-","UN_AC008581.2_LS0008","AC008581.2","protein coding gene","no",5.49,0,0,0.001,11,0,0,"0(0)","ESCA","no","TE_intersect_:77041834|chr5|77041834|77043006|SVA_F:SVA:Retroposon|60|-","TE_intersect_:77041834|chr5|77041834|77043006|SVA_F:SVA:Retroposon|60|-","intron_intersect_chr5:77039719|77046347","intron_intersect_chr5:77039719|77046347"]
["chr5:79784963|79788971:+","chr5:79784930|79784963:+_chr5:79788971|79789104:+_chr5:79790970|79791069:+_chr5:79793437|79793610:+_chr5:79799370|79800264:+","UN_CMYA5_LS0037","CMYA5","protein coding gene","no",1.11,0,0,0.01,95,0,0,"0(0)","ESCA;OV","no","TE_intersect_:79784941|chr5|79784941|79785767|L1M5:L1:LINE|310|-","NA","intron_intersect_chr5:79778118|79788971","exon_intersect_chr5:79788971|79789104"]
["chr5:80651653|80676779:+","chr5:80651416|80651653:+_chr5:80676779|80676789:+","UN_RASGRF2_UP_LS0006","RASGRF2","protein coding gene","no",0.6,0,0,0.004,41,0,0,"0(0)","ESCA;OV","no","NA","NA","intron_intersect_chr5:80650086|80654008","intron_intersect_chr5:80675128|80678927"]
["chr5:8193093|8237167:-","chr5:8191854|8193093:-_chr5:8237167|8237264:-_chr5:8387527|8387709:-_chr5:8452223|8452280:-_chr5:8835366|8835423:-_chr5:8843718|8843914:-","UN_AC091912.1_UP_LS0003","AC091912.1","pseudogene","no",2.25,0,0,0.011,108,0,0,"0(0)","GBM;LGG","no","TE_intersect_:8236776|chr5|8236776|8237314|L1PA10:L1:LINE|115|+","TE_intersect_:8192757|chr5|8192757|8193201|LOR1a:ERV1:LTR|140|-","NA","NA"]
["chr5:82788102|82797282:+","chr5:82434915|82435077:+_chr5:82539504|82539553:+_chr5:82543356|82543454:+_chr5:82787981|82788102:+_chr5:82797282|82797385:+","UN_AC008885.1_UP_LS0010","AC008885.1","pseudogene","no",1.23,0,0,0.002,20,0,0,"0(0)","THYM","no","TE_intersect_:82787947|chr5|82787947|82788259|AluY:Alu:SINE|90|-","TE_intersect_:82797094|chr5|82797094|82797458|MLT1A1:ERVL-MaLR:LTR|207|+","NA","NA"]
["chr5:85295264|85304086:-","chr5:85243903|85251459:-_chr5:85291399|85291543:-_chr5:85295174|85295264:-_chr5:85304086|85304199:-_chr5:85316860|85317018:-_chr5:85336136|85336303:-","UN_AC117522.1_UP_LS0004","AC117522.1","pseudogene","no",2.52,0,0,0.005,50,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr5:86794459|86813649:+","chr5:86794182|86794459:+_chr5:86813649|86813725:+_chr5:86947755|86947867:+_chr5:86951293|86951318:+_chr5:86952320|86952417:+_chr5:86953892|86954075:+","UN_AC109492.1_UP_LS0003","AC109492.1","lncRNA gene","no",10.16,0,0,0.002,19,0,0,"0(0)","UCS","no","TE_intersect_:86794203|chr5|86794203|86794539|MSTB1:ERVL-MaLR:LTR|155|+","NA","NA","NA"]
["chr5:87244207|87247057:+","chr5:87244182|87244207:+_chr5:87247057|87247367:+_chr5:87331348|87331500:+_chr5:87332507|87332642:+_chr5:87333267|87333337:+_chr5:87337974|87338091:+_chr5:87341290|87341321:+_chr5:87346672|87346724:+_chr5:87349214|87349364:+_chr5:87353157|87353235:+_chr5:87362551|87362671:+_chr5:87363348|87363504:+_chr5:87369813|87369900:+_chr5:87372118|87372195:+_chr5:87374163|87374320:+_chr5:87374840|87374916:+_chr5:87376393|87376565:+_chr5:87376881|87377040:+_chr5:87378396|87378538:+_chr5:87379735|87379850:+_chr5:87380509|87380595:+_chr5:87383713|87383780:+_chr5:87385301|87385389:+_chr5:87386826|87386903:+_chr5:87389393|87389527:+_chr5:87390800|87391919:+","UN_RASA1_UP_LS0010","RASA1","protein coding gene","no",4.62,0,0,0.007,64,0,0,"0(0)","GBM","no","TE_intersect_:87244191|chr5|87244191|87244275|MLT1J1:ERVL-MaLR:LTR|238|-","TE_intersect_:87246847|chr5|87246847|87247442|MLT1E3:ERVL-MaLR:LTR|183|+","NA","NA"]
["chr5:87770749|87773059:-","chr5:87767597|87770749:-_chr5:87773059|87774036:-","UN_LINC02144_UP_LS0005","LINC02144","lncRNA gene","no",1.41,0,0,0.005,47,0,0,"0(0)","GBM;LGG","no","NA","NA","NA","NA"]
["chr5:88747329|88747658:-","chr5:88744528|88747329:-_chr5:88747658|88749115:-","UN_MEF2C_LS0003","MEF2C","protein coding gene","yes",11.48,0,0,0.003,31,0,0,"0(0)","LAML","no","NA","TE_intersect_:88747314|chr5|88747314|88747648|AluYa5:Alu:SINE|3|-","intron_intersect_chr5:88731901|88749070","intron_intersect_chr5:88731901|88749070"]
["chr5:90073343|90073574:-","chr5:89939121|89939254:-_chr5:89943385|89943425:-_chr5:90073210|90073343:-_chr5:90073574|90073684:-","UN_MIR3660_UP_LS0008","MIR3660","small non-coding RNA gene","no",1.35,0,0,0.003,26,0,0,"0(0)","OV","no","TE_intersect_:90073229|chr5|90073229|90079236|L1PA2:L1:LINE|24|+","TE_intersect_:90073229|chr5|90073229|90079236|L1PA2:L1:LINE|24|+","NA","NA"]
["chr5:91152188|91195496:-","chr5:91151315|91152188:-_chr5:91195496|91195592:-_chr5:91202611|91202700:-_chr5:91207633|91207788:-_chr5:91242941|91243002:-_chr5:91244820|91245010:-_chr5:91264663|91264713:-_chr5:91313638|91313777:-_chr5:91314080|91314247:-_chr5:91314332|91314383:-","UN_LUCAT1_LS0004","LUCAT1","lncRNA gene","no",3.02,0,0,0.013,125,0,0,"0(0)","KIRC","no","NA","NA","NA","intron_intersect_chr5:91150221|91153221"]
["chr5:92415684|92486758:+","chr5:92199080|92199149:+_chr5:92204605|92204684:+_chr5:92415461|92415684:+_chr5:92486758|92486821:+","UN_AC124854.1_LS0010","AC124854.1","lncRNA gene","no",2.41,0,0,0.004,35,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr5:92415684|92432203","intron_intersect_chr5:92479426|92507348"]
["chr5:93149906|93191071:-","chr5:93050792|93051776:-_chr5:93075658|93075750:-_chr5:93090366|93090437:-_chr5:93149826|93149906:-_chr5:93191071|93191166:-_chr5:93213128|93213942:-","UN_AC012625.1_UP_LS0016","AC012625.1","lncRNA gene","no",2.31,0,0,0.011,104,0,0,"0(0)","LUSC;THYM","no","NA","NA","NA","NA"]
["chr5:93411509|93504592:-","chr5:93411033|93411509:-_chr5:93504592|93504695:-","UN_NR2F1-AS1_LS0004","NR2F1-AS1","lncRNA gene","no",3.07,0,0,0.022,214,0,0,"0(0)","BRCA;SARC","no","TE_intersect_:93504513|chr5|93504513|93504869|THE1A:ERVL-MaLR:LTR|71|-","NA","intron_intersect_chr5:93496103|93541872","intron_intersect_chr5:93411509|93422251"]
["chr5:97193586|97197159:+","chr5:97193443|97193586:+_chr5:97197159|97197332:+","UN_AC008883.1_LS0001","AC008883.1","lncRNA gene","no",3.5,0,0,0.005,52,0,0,"0(0)","ESCA","no","TE_intersect_:97192757|chr5|97192757|97193879|L1PB1:L1:LINE|138|-","TE_intersect_:97197100|chr5|97197100|97197607|MLT1J:ERVL-MaLR:LTR|307|+","intron_intersect_chr5:97188243|97201842","intron_intersect_chr5:97188243|97201842"]
["chr6:100163052|100196377:-","chr6:100147657|100151387:-_chr6:100151554|100151628:-_chr6:100156387|100156423:-_chr6:100161281|100161449:-_chr6:100162951|100163052:-_chr6:100196377|100196883:-","UN_AL080285.2_UP_LS0020","AL080285.2","pseudogene","no",1,0,0,0.016,150,0,0,"0(0)","ESCA;LUSC;OV;STAD;THYM","no","NA","NA","NA","NA"]
["chr6:102911212|102925402:+","chr6:102910573|102911212:+_chr6:102925402|102925500:+_chr6:102929540|102929782:+","UN_Z98755.1_UP_LS0017","Z98755.1","pseudogene","no",3.12,0,0,0.008,79,0,0,"0(0)","TGCT","no","TE_intersect_:102911203|chr6|102911203|102911239|MER67C:ERV1:LTR|209|-","TE_intersect_:102925172|chr6|102925172|102925581|MSTA:ERVL-MaLR:LTR|118|+","NA","NA"]
["chr6:104957787|104958099:+","chr6:104957663|104957787:+_chr6:104958099|104958286:+_chr6:105026298|105026482:+_chr6:105078414|105083332:+","UN_LIN28B_LS0003","LIN28B","protein coding gene","yes",2.27,0,0,0.003,30,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr6:104957260|104958099","exon_intersect_chr6:104958099|104958286"]
["chr6:106572103|106575158:-","chr6:106571976|106572103:-_chr6:106575158|106575300:-","UN_RTN4IP1_LS0002","RTN4IP1","protein coding gene","yes",3.44,0,0,0.007,63,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr6:106572411|106583328","intron_intersect_chr6:106572103|106572331"]
["chr6:10786603|10786639:-","chr6:10778926|10786603:-_chr6:10786639|10787058:-_chr6:10787094|10795000:-","UN_AL024498.2_LS0053","AL024498.2","protein coding gene","no",20.69,0,0,0.004,34,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr6:10784924|10791675","intron_intersect_chr6:10784924|10791675"]
["chr6:109282724|109285976:+","chr6:109250828|109250991:+_chr6:109254448|109254648:+_chr6:109255371|109255492:+_chr6:109257546|109257774:+_chr6:109261889|109262091:+_chr6:109264801|109264956:+_chr6:109267808|109267901:+_chr6:109269741|109270176:+_chr6:109282567|109282724:+_chr6:109285976|109286025:+_chr6:109286342|109286518:+_chr6:109294341|109294458:+_chr6:109295527|109295692:+_chr6:109300231|109300369:+_chr6:109305959|109306112:+_chr6:109307982|109308566:+","UN_CCDC162P_LS0037","CCDC162P","pseudogene","no",3.11,0,0,0.021,199,0,0,"0(0)","BLCA;ESCA;LUSC;TGCT","no","NA","NA","NA","exon_intersect_chr6:109285976|109286025"]
["chr6:110671920|110672259:+","chr6:110660626|110660783:+_chr6:110661461|110661592:+_chr6:110671799|110671920:+_chr6:110672259|110672654:+","UN_CDK19_LS0046","CDK19","protein coding gene","no",3.37,0,0,0.003,31,0,0,"0(0)","PRAD","no","TE_intersect_:110671785|chr6|110671785|110672042|AluSz:Alu:SINE|109|-","NA","intron_intersect_chr6:110670541|110700562","intron_intersect_chr6:110670541|110700562"]
["chr6:112145422|112155320:+","chr6:112145228|112145422:+_chr6:112155320|112155732:+","UN_LAMA4_LS0030","LAMA4","protein coding gene","no",2.94,0,0,0.012,118,0,0,"0(0)","OV","no","TE_intersect_:112145073|chr6|112145073|112145698|LTR18B:ERVL:LTR|173|+","NA","intron_intersect_chr6:112144933|112148157","exon_intersect_chr6:112155320|112155732"]
["chr6:112641065|112661511:+","chr6:112641048|112641065:+_chr6:112661511|112661611:+_chr6:112671348|112671951:+","UN_AL360085.1_UP_LS0046","AL360085.1","pseudogene","no",1.52,0,0,0.006,57,0,0,"0(0)","KIRP","no","NA","NA","NA","NA"]
["chr6:113602329|113603695:+","chr6:113531011|113531258:+_chr6:113541837|113541901:+_chr6:113602208|113602329:+_chr6:113603695|113603749:+_chr6:113605094|113605929:+","UN_FO393415.1_UP_LS0005","FO393415.1","pseudogene","no",1.68,0,0,0.006,53,0,0,"0(0)","ESCA","no","TE_intersect_:113602178|chr6|113602178|113602486|AluSx:Alu:SINE|162|-","NA","NA","NA"]
["chr6:114425470|114425569:+","chr6:114422482|114425470:+_chr6:114425569|114426451:+_chr6:114427587|114427712:+_chr6:114448967|114449031:+_chr6:114455857|114456634:+","UN_HDAC2-AS2_LS0030","HDAC2-AS2","lncRNA gene","no",4.26,0,0,0.005,52,0,0,"0(0)","TGCT","no","TE_intersect_:114424805|chr6|114424805|114427844|HERVH-int:ERV1:LTR|106|-","TE_intersect_:114424805|chr6|114424805|114427844|HERVH-int:ERV1:LTR|106|-","intron_intersect_chr6:114406668|114425612","intron_intersect_chr6:114406668|114425612"]
["chr6:117538835|117539262:+","chr6:117482744|117482893:+_chr6:117484950|117485040:+_chr6:117503767|117503979:+_chr6:117519816|117519950:+_chr6:117521525|117521576:+_chr6:117525362|117525434:+_chr6:117532260|117532393:+_chr6:117537185|117537225:+_chr6:117538620|117538835:+_chr6:117539262|117539379:+_chr6:117540668|117540815:+_chr6:117540918|117541025:+_chr6:117543124|117543211:+_chr6:117544528|117544577:+_chr6:117545478|117545597:+_chr6:117547602|117550025:+","UN_AL132671.2_LS0061","AL132671.2","protein coding gene","no",1.5,0,0,0.004,38,0,0,"0(0)","PAAD","no","NA","NA","exon_intersect_chr6:117538620|117540815","exon_intersect_chr6:117538620|117540815"]
["chr6:11905093|11932791:-","chr6:11858443|11862845:-_chr6:11865598|11865659:-_chr6:11871558|11871668:-_chr6:11872856|11872922:-_chr6:11904971|11905093:-_chr6:11932791|11933123:-","UN_AMD1P4_UP_LS0007","AMD1P4","pseudogene","no",3.3,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","TE_intersect_:11904769|chr6|11904769|11905722|L1PA14:L1:LINE|94|-","NA","NA"]
["chr6:121958124|121959693:-","chr6:121932073|121932984:-_chr6:121951278|121958124:-_chr6:121959693|121959920:-","UN_HMGB3P18_UP_LS0012","HMGB3P18","pseudogene","no",3.02,0,0,0.005,44,0,0,"0(0)","BRCA","no","NA","NA","NA","NA"]
["chr6:122848686|122848866:-","chr6:122847823|122848686:-_chr6:122848866|122850349:-","UN_Z99129.2_UP_LS0038","Z99129.2","pseudogene","no",1.65,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:122847780|chr6|122847780|122849162|SVA_F:SVA:Retroposon|63|-","TE_intersect_:122847780|chr6|122847780|122849162|SVA_F:SVA:Retroposon|63|-","NA","NA"]
["chr6:125272497|125363288:+","chr6:125268077|125268265:+_chr6:125270516|125270635:+_chr6:125272350|125272497:+_chr6:125363288|125363551:+","UN_LINC02523_UP_LS0005","LINC02523","lncRNA gene","no",8.39,0,0,0.001,11,0,0,"0(0)","UCS","no","TE_intersect_:125272316|chr6|125272316|125274111|HERVL18-int:ERVL:LTR|158|+","NA","intron_intersect_chr6:125265352|125275350","NA"]
["chr6:126348576|126360586:+","chr6:126340174|126340399:+_chr6:126346205|126346318:+_chr6:126348466|126348576:+_chr6:126360586|126360598:+","UN_MIR588_UP_LS0008","MIR588","small non-coding RNA gene","no",3.37,0,0,0.003,24,0,0,"0(0)","ESCA","no","NA","TE_intersect_:126357906|chr6|126357906|126361291|L1P4a:L1:LINE|187|-","exon_intersect_chr6:126348466|126348875","NA"]
["chr6:12991036|12993479:-","chr6:12990748|12991036:-_chr6:12993479|12993609:-_chr6:12993761|12993803:-","UN_PHACTR1_LS0015","PHACTR1","protein coding gene","no",4.2,0,0,0.008,76,0,0,"0(0)","OV","no","TE_intersect_:12993280|chr6|12993280|12993495|L2b:L2:LINE|370|-","TE_intersect_:12990434|chr6|12990434|12991153|LTR1F2:ERV1:LTR|215|-","intron_intersect_chr6:12957751|13053363","intron_intersect_chr6:12957751|13053363"]
["chr6:13134036|13160204:+","chr6:13133280|13134036:+_chr6:13160204|13160284:+_chr6:13182519|13182686:+_chr6:13184799|13185005:+_chr6:13205815|13206136:+_chr6:13227816|13228063:+_chr6:13230037|13230193:+_chr6:13272860|13272915:+_chr6:13278268|13278329:+_chr6:13283422|13283562:+_chr6:13286146|13286222:+_chr6:13287063|13293494:+","UN_PHACTR1_LS0028","PHACTR1","protein coding gene","no",1.67,0,0,0.004,40,0,0,"0(0)","ESCA;TGCT","no","TE_intersect_:13133254|chr6|13133254|13134808|SVA_B:SVA:Retroposon|49|+","NA","intron_intersect_chr6:13053529|13160204","exon_intersect_chr6:13160204|13160284"]
["chr6:133768927|133837658:-","chr6:133537174|133537358:-_chr6:133538072|133538192:-_chr6:133568190|133568248:-_chr6:133760185|133760260:-_chr6:133768831|133768927:-_chr6:133837658|133838116:-","UN_TARID_LS0029","TARID","lncRNA gene","no",1.25,0,0,0.007,71,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:133837593|133837724","intron_intersect_chr6:133768923|133821147"]
["chr6:134558844|134583339:+","chr6:134558716|134558844:+_chr6:134583339|134583461:+_chr6:134599392|134599507:+_chr6:134604095|134604589:+","UN_AL078590.3_LS0026","AL078590.3","lncRNA gene","no",10.08,0,0,0.003,31,0,0,"0(0)","SKCM","no","TE_intersect_:134558556|chr6|134558556|134558927|THE1C:ERVL-MaLR:LTR|108|+","NA","intron_intersect_chr6:134540344|134603564","intron_intersect_chr6:134540344|134603564"]
["chr6:137038131|137088864:-","chr6:137037927|137038131:-_chr6:137088864|137089038:-_chr6:137089324|137089491:-","UN_NHEG1_UP_LS0004","NHEG1","lncRNA gene","no",4.77,0,0,0.004,41,0,0,"0(0)","OV;THYM","no","NA","NA","NA","intron_intersect_chr6:137038131|137042785"]
["chr6:138088648|138090850:-","chr6:138088505|138088648:-_chr6:138090850|138092268:-_chr6:138096354|138096494:-_chr6:138107127|138107511:-","UN_PERP_LS0001","PERP","protein coding gene","no",6.78,0,0,0.008,74,0,0,"0(0)","ESCA;HNSC","no","NA","NA","exon_intersect_chr6:138088505|138092268","exon_intersect_chr6:138088505|138092268"]
["chr6:139451669|139506464:+","chr6:139429086|139429613:+_chr6:139434778|139434851:+_chr6:139436337|139436460:+_chr6:139451558|139451669:+_chr6:139506464|139507883:+","AL592429.2_LS008","AL592429.2","lncRNA gene","no",2.52,0,0,0.001,8,0,0,"0(0)","DLBC","yes","NA","TE_intersect_:139506455|chr6|139506455|139506713|LTR16:ERVL:LTR|268|+","NA","NA"]
["chr6:140846567|140852819:-","chr6:140845958|140846284:-_chr6:140846381|140846567:-_chr6:140852819|140852924:-_chr6:140898188|140898431:-","UN_AL035446.1_LS0004","AL035446.1","lncRNA gene","no",3.48,0,0,0.003,30,0,0,"0(0)","GBM","no","TE_intersect_:140852724|chr6|140852724|140852855|MIR:MIR:SINE|350|-","TE_intersect_:140846436|chr6|140846436|140846750|MLT1L:ERVL-MaLR:LTR|338|-","exon_intersect_chr6:140852819|140852924","intron_intersect_chr6:140846304|140852819"]
["chr6:142195296|142197029:+","chr6:142147257|142147399:+_chr6:142166228|142166322:+_chr6:142169550|142169677:+_chr6:142170346|142170421:+_chr6:142189426|142189534:+_chr6:142195266|142195296:+_chr6:142197029|142197078:+_chr6:142198439|142198615:+_chr6:142218498|142220946:+","UN_VTA1_LS0007","VTA1","protein coding gene","no",10.57,0,0,0.002,19,0,0,"0(0)","LAML","no","TE_intersect_:142194212|chr6|142194212|142196619|L1MEc:L1:LINE|276|-","TE_intersect_:142197028|chr6|142197028|142197183|L1MEc:L1:LINE|329|-","intron_intersect_chr6:142189534|142198439","intron_intersect_chr6:142189534|142198439"]
["chr6:14461391|14461848:-","chr6:14444651|14444916:-_chr6:14448516|14448628:-_chr6:14460409|14460521:-_chr6:14461247|14461391:-_chr6:14461848|14461950:-_chr6:14597514|14597599:-_chr6:14599631|14599688:-_chr6:14643951|14644069:-_chr6:14777431|14777577:-","UN_AL080313.2_UP_LS0017","AL080313.2","lncRNA gene","no",3.67,0,0,0.003,24,0,0,"0(0)","THYM","no","TE_intersect_:14461781|chr6|14461781|14462166|MLT1A1:ERVL-MaLR:LTR|167|-","NA","NA","NA"]
["chr6:14861717|14864335:-","chr6:14845019|14845631:-_chr6:14854562|14854772:-_chr6:14860233|14861317:-_chr6:14861622|14861717:-_chr6:14864335|14865477:-","UN_AL138720.1_LS0016","AL138720.1","lncRNA gene","no",2.49,0,0,0.003,33,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr6:14790098|14976788","intron_intersect_chr6:14790098|14976788"]
["chr6:14997475|15021817:-","chr6:14880665|14880801:-_chr6:14997416|14997475:-_chr6:15021817|15021941:-","UN_AL138720.1_LS0036","AL138720.1","lncRNA gene","no",3.82,0,0,0.004,42,0,0,"0(0)","TGCT","no","TE_intersect_:15021581|chr6|15021581|15022284|LTR85b:Gypsy?:LTR|279|-","NA","intron_intersect_chr6:14997475|15021821","intron_intersect_chr6:14997475|15021821"]
["chr6:15009084|15021821:-","chr6:14976214|14977318:-_chr6:14997416|14997475:-_chr6:15008925|15009084:-_chr6:15021821|15021977:-","UN_AL138720.1_LS0043","AL138720.1","lncRNA gene","no",3.38,0,0,0.003,30,0,0,"0(0)","TGCT","no","TE_intersect_:15021581|chr6|15021581|15022284|LTR85b:Gypsy?:LTR|279|-","TE_intersect_:15008972|chr6|15008972|15009109|AluSx1:Alu:SINE|99|+","exon_intersect_chr6:15021821|15021964","intron_intersect_chr6:14997475|15021821"]
["chr6:152011794|152020476:+","chr6:151807679|151808364:+_chr6:151842597|151842787:+_chr6:151880655|151880771:+_chr6:152011656|152011794:+_chr6:152020476|152020806:+","UN_ESR1_LS0080","ESR1","protein coding gene","yes",6.24,0,0,0.007,69,0,0,"0(0)","OV;UCEC","no","NA","TE_intersect_:152020438|chr6|152020438|152020750|AluSz6:Alu:SINE|135|-","intron_intersect_chr6:152011794|152060991","intron_intersect_chr6:152011794|152060991"]
["chr6:154039834|154075474:+","chr6:154039495|154039834:+_chr6:154075474|154087785:+_chr6:154089826|154090178:+_chr6:154090952|154091472:+_chr6:154118683|154125895:+","UN_OPRM1_LS0002","OPRM1","protein coding gene","no",2.5,0,0,0.003,33,0,0,"0(0)","PCPG","no","NA","TE_intersect_:154075452|chr6|154075452|154075708|AluSz:Alu:SINE|133|-","intron_intersect_chr6:154039834|154046694","intron_intersect_chr6:154074458|154083490"]
["chr6:155411360|155411629:-","chr6:155394930|155395574:-_chr6:155396809|155396962:-_chr6:155407130|155407254:-_chr6:155411214|155411360:-_chr6:155411629|155411877:-","UN_NOX3_LS0001","NOX3","protein coding gene","no",0.94,0,0,0.002,22,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr6:155411360|155422694","intron_intersect_chr6:155411360|155422694"]
["chr6:15718447|15722720:-","chr6:15718050|15718447:-_chr6:15722720|15722794:-_chr6:15726472|15727539:-","UN_DTNBP1_UP_LS0003","DTNBP1","protein coding gene","no",3.91,0,0,0.006,60,0,0,"0(0)","TGCT","no","TE_intersect_:15722636|chr6|15722636|15723001|THE1C:ERVL-MaLR:LTR|104|-","TE_intersect_:15718297|chr6|15718297|15718470|AluSx1:Alu:SINE|116|+","NA","NA"]
["chr6:158869528|158873528:+","chr6:158869416|158869528:+_chr6:158873528|158873621:+_chr6:158895221|158895366:+_chr6:158909967|158910236:+","UN_AL035530.2_UP_LS0005","AL035530.2","lncRNA gene","no",1.57,0,0,0.004,40,0,0,"0(0)","ACC","no","NA","TE_intersect_:158873319|chr6|158873319|158873637|AluJr4:Alu:SINE|145|-","NA","exon_intersect_chr6:158873528|158873621"]
["chr6:160931368|160958969:+","chr6:160931080|160931368:+_chr6:160958969|160959064:+_chr6:160969718|160969824:+_chr6:160981062|160981183:+","UN_AL139393.1_LS0001","AL139393.1","lncRNA gene","no",2.01,0.03,0,0.006,60,0.001,1,"0(0)","LGG","no","NA","NA","exon_intersect_chr6:160931080|160931372","exon_intersect_chr6:160958969|160959064"]
["chr6:162450212|162450443:+","chr6:162449978|162450212:+_chr6:162450443|162450537:+_chr6:162467204|162467359:+","UN_PRKN_LS0081","PRKN","protein coding gene","no",6.23,0,0,0.008,75,0,0,"0(0)","KICH","no","NA","TE_intersect_:162450426|chr6|162450426|162451024|L1MC3:L1:LINE|178|+","intron_intersect_chr6:162443473|162500242","intron_intersect_chr6:162443473|162500242"]
["chr6:162450537|162467204:+","chr6:162449978|162450212:+_chr6:162450443|162450537:+_chr6:162467204|162467359:+","UN_PRKN_LS0084","PRKN","protein coding gene","no",2.83,0,0,0.008,81,0,0,"0(0)","KICH","no","TE_intersect_:162450426|chr6|162450426|162451024|L1MC3:L1:LINE|178|+","TE_intersect_:162467079|chr6|162467079|162467317|L2a:L2:LINE|262|+","intron_intersect_chr6:162443473|162500242","intron_intersect_chr6:162443473|162500242"]
["chr6:164081707|164096230:-","chr6:164073946|164081707:-_chr6:164096230|164096385:-","UN_AL137005.2_UP_LS0022","AL137005.2","lncRNA gene","no",1.97,0,0,0.011,105,0,0,"0(0)","SKCM","no","TE_intersect_:164096146|chr6|164096146|164096523|THE1C:ERVL-MaLR:LTR|119|-","NA","NA","NA"]
["chr6:164318143|164337713:-","chr6:164289985|164293729:-_chr6:164318037|164318143:-_chr6:164337713|164338170:-","UN_Z97205.1_UP_LS0025","Z97205.1","lncRNA gene","no",11.6,0,0,0.005,50,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr6:164829702|164831021:+","chr6:164827750|164827963:+_chr6:164829521|164829702:+_chr6:164831021|164834726:+","UN_AL450345.1_LS0004","AL450345.1","lncRNA gene","no",2.81,0,0,0.001,14,0,0,"0(0)","GBM","no","TE_intersect_:164829685|chr6|164829685|164830953|Charlie1a:hAT-Charlie:DNA|248|+","NA","exon_intersect_chr6:164827750|164831630","exon_intersect_chr6:164827750|164831630"]
["chr6:165576539|165600166:-","chr6:165327287|165333127:-_chr6:165336123|165336211:-_chr6:165339278|165339358:-_chr6:165343391|165343502:-_chr6:165379194|165379366:-_chr6:165388298|165388453:-_chr6:165392646|165392796:-_chr6:165395181|165395264:-_chr6:165396317|165396459:-_chr6:165413501|165413687:-_chr6:165416189|165416281:-_chr6:165418635|165418777:-_chr6:165428658|165428709:-_chr6:165430287|165430345:-_chr6:165431422|165431472:-_chr6:165432974|165433129:-_chr6:165435237|165435377:-_chr6:165448928|165448977:-_chr6:165450242|165450362:-_chr6:165482315|165482343:-_chr6:165543440|165543568:-_chr6:165576412|165576539:-_chr6:165600166|165600869:-","UN_PDE10A_LS0031","PDE10A","protein coding gene","no",1.27,0,0,0.005,44,0,0,"0(0)","BLCA","no","NA","TE_intersect_:165576342|chr6|165576342|165576862|L2:L2:LINE|340|+","intron_intersect_chr6:165576449|165660069","intron_intersect_chr6:165576449|165660069"]
["chr6:167182619|167193631:+","chr6:167181601|167182619:+_chr6:167193631|167193779:+_chr6:167195377|167195494:+_chr6:167196490|167202759:+","UN_TCP10L2_LS0014","TCP10L2","protein coding gene","no",3,0,0,0.006,61,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr6:167181725|167182908","exon_intersect_chr6:167193628|167193779"]
["chr6:167841155|167864551:+","chr6:167840920|167841155:+_chr6:167864551|167864746:+_chr6:167870383|167870498:+_chr6:167872214|167872377:+_chr6:167875335|167875495:+_chr6:167880360|167880517:+_chr6:167889215|167889326:+_chr6:167890862|167891029:+_chr6:167896878|167896972:+_chr6:167898205|167898463:+","UN_AFDN_LS0004","AFDN","protein coding gene","no",1.69,0,0,0.006,54,0,0,"0(0)","MESO","no","TE_intersect_:167841101|chr6|167841101|167841548|L2b:L2:LINE|328|-","NA","intron_intersect_chr6:167827932|167864551","exon_intersect_chr6:167864551|167864746"]
["chr6:168412469|168412625:-","chr6:168410239|168412469:-_chr6:168412625|168412755:-_chr6:168412890|168413132:-","UN_DACT2_UP_LS0019","DACT2","protein coding gene","no",4.77,0,0,0.009,85,0,0,"0(0)","LIHC;TGCT","no","TE_intersect_:168412443|chr6|168412443|168412963|HAL1:L1:LINE|308|-","TE_intersect_:168412443|chr6|168412443|168412963|HAL1:L1:LINE|308|-","NA","NA"]
["chr6:169186325|169188203:-","chr6:169169405|169171995:-_chr6:169173994|169183577:-_chr6:169185171|169185440:-_chr6:169186073|169186325:-_chr6:169188203|169188503:-","UN_LINC02544_UP_LS0003","LINC02544","lncRNA gene","no",6.71,0,0,0.002,18,0,0,"0(0)","UCS","no","NA","NA","NA","NA"]
["chr6:169881589|169890101:+","chr6:169847548|169847598:+_chr6:169881422|169881589:+_chr6:169890101|169890308:+_chr6:169904028|169904828:+","UN_AL596442.1_UP_LS0014","AL596442.1","lncRNA gene","no",8.24,0,0,0.004,43,0,0,"0(0)","UVM","no","TE_intersect_:169881525|chr6|169881525|169881640|MIR:MIR:SINE|296|-","NA","NA","NA"]
["chr6:170147619|170160125:-","chr6:170146609|170147619:-_chr6:170160125|170160469:-","UN_AL049612.1_UP_LS0051","AL049612.1","lncRNA gene","no",3.88,0,0,0.034,322,0,0,"0(0)","ESCA;HNSC;LUSC;OV;THYM;UCEC;UCS","no","NA","NA","NA","NA"]
["chr6:1897942|1898098:-","chr6:1853540|1897942:-_chr6:1898098|1899796:-_chr6:1899896|1930230:-_chr6:1959867|1959971:-_chr6:1960774|1960909:-","UN_GMDS_LS0040","GMDS","protein coding gene","no",40.49,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr6:1742586|1930103","intron_intersect_chr6:1742586|1930103"]
["chr6:20712577|20739519:+","chr6:20712230|20712577:+_chr6:20739519|20739615:+_chr6:20758595|20758643:+_chr6:20781145|20781265:+_chr6:20846075|20846174:+","UN_CDKAL1_LS0030","CDKAL1","protein coding gene","no",11.22,0,0,0.008,75,0,0,"0(0)","THCA","no","NA","NA","intron_intersect_chr6:20649377|20722328","exon_intersect_chr6:20739519|20739615"]
["chr6:21356874|21364691:-","chr6:21351959|21356874:-_chr6:21364691|21366902:-","UN_AL031767.1_UP_LS0002","AL031767.1","lncRNA gene","no",15.98,0,0,0.006,60,0,0,"0(0)","MESO;TGCT","no","TE_intersect_:21363824|chr6|21363824|21366814|HERVH-int:ERV1:LTR|93|-","NA","NA","NA"]
["chr6:21785817|21802657:+","chr6:21785715|21785817:+_chr6:21802657|21802740:+_chr6:21909470|21909603:+_chr6:21978945|21979062:+_chr6:22020339|22020542:+_chr6:22056546|22056690:+_chr6:22063020|22063240:+_chr6:22083583|22083718:+_chr6:22110747|22110920:+_chr6:22173998|22174062:+_chr6:22191567|22191656:+_chr6:22194045|22194385:+","UN_CASC15_LS0041","CASC15","lncRNA gene","no",2.46,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr6:21783708|21802657","exon_intersect_chr6:21802657|21802740"]
["chr6:22517770|22517940:+","chr6:22349246|22349493:+_chr6:22352561|22352651:+_chr6:22400529|22400643:+_chr6:22517685|22517770:+_chr6:22517940|22518115:+","UN_HDGFL1_UP_LS0015","HDGFL1","protein coding gene","no",2.14,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","TE_intersect_:22517895|chr6|22517895|22518162|L2:L2:LINE|379|-","NA","NA"]
["chr6:24178632|24193408:-","chr6:24171756|24174834:-_chr6:24178330|24178632:-_chr6:24193408|24193513:-","UN_DCDC2_LS0006","DCDC2","protein coding gene","yes",8.83,0,0,0.012,116,0,0,"0(0)","ESCA;LIHC;STAD","no","TE_intersect_:24191693|chr6|24191693|24193872|HAL1:L1:LINE|264|+","NA","intron_intersect_chr6:24178632|24205002","intron_intersect_chr6:24178632|24205002"]
["chr6:24849950|24850445:-","chr6:24839392|24840775:-_chr6:24842862|24843554:-_chr6:24848025|24848154:-_chr6:24849802|24849950:-_chr6:24850445|24850722:-_chr6:24852575|24852618:-_chr6:24860973|24861036:-_chr6:24865301|24865450:-_chr6:24869094|24869147:-_chr6:24870866|24870889:-_chr6:24872881|24872959:-_chr6:24873644|24873799:-_chr6:24875691|24875817:-_chr6:24935838|24936052:-","UN_RIPOR2_LS0026","RIPOR2","protein coding gene","no",2.31,0,0,0.002,15,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr6:24849950|24850597","intron_intersect_chr6:24849950|24850597"]
["chr6:25583668|25586267:-","chr6:25583613|25583668:-_chr6:25586267|25586965:-","UN_CARMIL1_LS0039","CARMIL1","protein coding gene","no",3.64,0,0,0.003,29,0,0,"0(0)","TGCT","no","TE_intersect_:25585547|chr6|25585547|25587018|SVA_B:SVA:Retroposon|48|-","NA","intron_intersect_chr6:25581439|25594415","intron_intersect_chr6:25581439|25594415"]
["chr6:26749717|26773741:-","chr6:26749666|26749717:-_chr6:26773741|26773831:-_chr6:26778534|26779014:-","UN_ZNF322_UP_LS0018","ZNF322","protein coding gene","no",7.55,0,0,0.004,42,0,0,"0(0)","LUAD","no","NA","NA","NA","NA"]
["chr6:26984797|26992351:-","chr6:26983636|26984797:-_chr6:26992351|26992608:-_chr6:27019528|27020333:-","UN_LINC00240_LS0006","LINC00240","lncRNA gene","no",2.78,0,0,0.01,92,0,0,"0(0)","OV","no","TE_intersect_:26991829|chr6|26991829|26992572|L1P4b:L1:LINE|267|-","TE_intersect_:26984479|chr6|26984479|26986678|MER65-int:ERV1:LTR|250|-","intron_intersect_chr6:26974367|27001208","intron_intersect_chr6:26974367|27001208"]
["chr6:27407182|27407718:-","chr6:27407066|27407182:-_chr6:27407718|27407854:-_chr6:27410266|27410336:-_chr6:27456826|27456921:-_chr6:27457283|27457409:-_chr6:27467853|27467920:-_chr6:27472288|27472433:-_chr6:27472729|27473090:-","UN_AL031118.1_UP_LS0001","AL031118.1","lncRNA gene","no",1.9,0,0,0.004,41,0,0,"0(0)","GBM","no","TE_intersect_:27407128|chr6|27407128|27407723|LTR18B:ERVL:LTR|130|-","TE_intersect_:27407128|chr6|27407128|27407723|LTR18B:ERVL:LTR|130|-","exon_intersect_chr6:27407697|27407996","NA"]
["chr6:27885924|27887967:-","chr6:27885836|27885924:-_chr6:27887967|27893149:-","UN_HIST1H4L_UP_LS0002","HIST1H4L","protein coding gene","no",0.98,0,0,0.005,44,0,0,"0(0)","CHOL","no","TE_intersect_:27887861|chr6|27887861|27888010|MER34C2:ERV1:LTR|186|-","NA","NA","NA"]
["chr6:28986879|28999122:+","chr6:28985810|28985884:+_chr6:28986042|28986232:+_chr6:28986313|28986506:+_chr6:28986677|28986879:+_chr6:28999122|28999245:+","UN_AL662791.2_UP_LS0001","AL662791.2","lncRNA gene","no",2.77,0,0,0.005,47,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr6:28986677|28987484","intron_intersect_chr6:28998838|28999487"]
["chr6:29945281|30009535:+","chr6:29725454|29725563:+_chr6:29890264|29890296:+_chr6:29945234|29945281:+_chr6:30009535|30009634:+","UN_ETF1P1_UP_LS0032","ETF1P1","pseudogene","no",94.16,0.04,0,0.002,22,0.001,1,"0(0)","ESCA","no","NA","NA","intron_intersect_chr6:29945281|29945451","exon_intersect_chr6:30009535|30009956"]
["chr6:30722583|30723491:-","chr6:30722260|30722583:-_chr6:30723491|30723783:-","UN_TUBB_LS0044","TUBB","protein coding gene","no",0.99,0,0,0.008,76,0,0,"0(0)","ESCA;LAML;STAD","no","NA","NA","exon_intersect_chr6:30723105|30723877","exon_intersect_chr6:30722537|30722645"]
["chr6:30893139|30896678:-","chr6:30893011|30893139:-_chr6:30896678|30896857:-","UN_DDR1_LS0096","DDR1","protein coding gene","no",3.76,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:30896621|30896865","exon_intersect_chr6:30892620|30893163"]
["chr6:31119733|31120335:-","chr6:31115090|31117529:-_chr6:31119586|31119733:-_chr6:31120335|31120446:-","UN_PSORS1C1_LS0016","PSORS1C1","protein coding gene","no",7.5,0,0,0.007,63,0,0,"0(0)","ESCA;HNSC","no","NA","TE_intersect_:31119616|chr6|31119616|31119927|AluSx1:Alu:SINE|119|+","exon_intersect_chr6:31120335|31120446","intron_intersect_chr6:31118820|31120335"]
["chr6:31270313|31353881:+","chr6:31270210|31270313:+_chr6:31353881|31354197:+_chr6:31381980|31382071:+","UN_HLA-B_LS0040","HLA-B","protein coding gene","no",160.53,0,0,0.005,47,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:31270210|31270485","exon_intersect_chr6:31353872|31354296"]
["chr6:31611706|31620189:-","chr6:31611083|31611706:-_chr6:31620189|31620367:-","UN_UQCRHP1_UP_LS0001","UQCRHP1","pseudogene","no",5.47,0,0,0.004,36,0,0,"0(0)","LGG","no","NA","TE_intersect_:31611434|chr6|31611434|31611729|AluSc:Alu:SINE|122|+","NA","NA"]
["chr6:31747432|31752845:+","chr6:31740021|31740062:+_chr6:31740454|31740613:+_chr6:31741163|31741286:+_chr6:31742877|31742957:+_chr6:31743108|31743170:+_chr6:31743904|31744299:+_chr6:31744546|31744581:+_chr6:31747387|31747432:+_chr6:31752845|31753439:+_chr6:31753567|31753629:+_chr6:31758165|31758293:+_chr6:31758548|31758620:+_chr6:31758766|31758875:+_chr6:31759097|31759177:+_chr6:31759425|31759491:+","UN_MSH5-SAPCD1_LS0016","MSH5-SAPCD1","protein coding gene","no",3.15,0,0,0.005,52,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr6:31747432|31751496","intron_intersect_chr6:31751653|31753283"]
["chr6:31817346|31828257:+","chr6:31815543|31817346:+_chr6:31828257|31829753:+_chr6:31835411|31835451:+_chr6:31836424|31836517:+_chr6:31837236|31837435:+_chr6:31839543|31839761:+","UN_AL671762.1_UP_LS0568","AL671762.1","lncRNA gene","no",373.23,0,0,0.004,34,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chr6:31815464|31817946","exon_intersect_chr6:31827735|31830255"]
["chr6:31957036|31957167:+","chr6:31953979|31954304:+_chr6:31955228|31957036:+_chr6:31957167|31957297:+_chr6:31958652|31959214:+_chr6:31959297|31959400:+_chr6:31960010|31960119:+_chr6:31960220|31960337:+_chr6:31960432|31960546:+_chr6:31960666|31960740:+_chr6:31961041|31961094:+_chr6:31961196|31961386:+_chr6:31961547|31961675:+_chr6:31961909|31962054:+_chr6:31962439|31962585:+_chr6:31962714|31962798:+_chr6:31962985|31963091:+_chr6:31963413|31963559:+_chr6:31963637|31963733:+_chr6:31963913|31964125:+_chr6:31964232|31964342:+_chr6:31965783|31966013:+_chr6:31966709|31966846:+_chr6:31967004|31967141:+_chr6:31967273|31967377:+_chr6:31967715|31967862:+_chr6:31967956|31968082:+_chr6:31968328|31968538:+_chr6:31968686|31968796:+_chr6:31968871|31969089:+_chr6:31969280|31969420:+_chr6:31969515|31969809:+","UN_NELFE_LS0017","NELFE","protein coding gene","no",1.75,0,0,0.011,106,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","intron_intersect_chr6:31957010|31957318","intron_intersect_chr6:31957010|31957318"]
["chr6:32443448|32443903:-","chr6:32439877|32440023:-_chr6:32442492|32442667:-_chr6:32443188|32443310:-_chr6:32443358|32443448:-_chr6:32443903|32444910:-","UN_HLA-DRA_LS0055","HLA-DRA","protein coding gene","no",3.51,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:32443756|32443921","exon_intersect_chr6:32443185|32443466"]
["chr6:32660238|32661387:+","chr6:32475178|32475198:+_chr6:32660044|32660238:+_chr6:32661387|32661414:+_chr6:32661965|32662097:+_chr6:32758981|32759133:+","UN_HLA-DQB1_LS0011","HLA-DQB1","protein coding gene","no",1.74,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:32659467|32660249","exon_intersect_chr6:32661347|32665067"]
["chr6:32938783|32938834:+","chr6:32938683|32938783:+_chr6:32938834|32938967:+","UN_AL645941.2_LS0003","AL645941.2","protein coding gene","no",4.28,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:32934629|32938965","exon_intersect_chr6:32934629|32938965"]
["chr6:33192306|33192583:-","chr6:33162695|33163818:-_chr6:33164267|33164473:-_chr6:33164852|33164964:-_chr6:33165549|33165816:-_chr6:33165931|33165984:-_chr6:33166171|33166206:-_chr6:33166513|33166566:-_chr6:33166720|33166827:-_chr6:33167070|33167123:-_chr6:33167264|33167317:-_chr6:33167426|33167533:-_chr6:33167799|33167852:-_chr6:33168519|33168572:-_chr6:33168706|33168759:-_chr6:33168955|33169008:-_chr6:33169383|33169490:-_chr6:33169831|33169884:-_chr6:33170047|33170100:-_chr6:33170326|33170379:-_chr6:33170557|33170610:-_chr6:33170810|33170917:-_chr6:33171114|33171167:-_chr6:33171271|33171324:-_chr6:33171467|33171574:-_chr6:33171713|33171820:-_chr6:33172050|33172103:-_chr6:33172289|33172378:-_chr6:33172530|33172637:-_chr6:33173060|33173113:-_chr6:33173348|33173401:-_chr6:33173502|33173555:-_chr6:33173701|33173745:-_chr6:33173873|33173926:-_chr6:33174011|33174055:-_chr6:33174165|33174218:-_chr6:33174527|33174580:-_chr6:33175574|33175681:-_chr6:33176016|33176069:-_chr6:33176259|33176303:-_chr6:33176433|33176486:-_chr6:33176721|33176765:-_chr6:33176992|33177045:-_chr6:33177181|33177225:-_chr6:33177412|33177465:-_chr6:33177662|33177706:-_chr6:33178132|33178185:-_chr6:33178308|33178352:-_chr6:33178435|33178488:-_chr6:33178679|33178732:-_chr6:33178920|33178973:-_chr6:33179073|33179126:-_chr6:33179231|33179284:-_chr6:33179431|33179487:-_chr6:33179719|33179805:-_chr6:33180258|33180332:-_chr6:33180668|33180730:-_chr6:33180964|33181005:-_chr6:33181111|33181170:-_chr6:33184145|33184324:-_chr6:33184992|33185054:-_chr6:33185701|33185778:-_chr6:33186627|33186818:-_chr6:33188362|33188524:-_chr6:33188978|33189188:-_chr6:33189320|33189469:-_chr6:33192159|33192306:-_chr6:33192583|33193223:-","UN_HLA-DPA3_UP_LS0008","HLA-DPA3","pseudogene","no",1.63,0,0,0.004,43,0,0,"0(0)","UCS","no","NA","NA","NA","exon_intersect_chr6:33192159|33192499"]
["chr6:33417638|33417680:+","chr6:33417480|33417551:+_chr6:33417604|33417638:+_chr6:33417680|33417841:+","UN_CUTA_LS0016","CUTA","protein coding gene","no",4.87,0,0,0.004,40,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:33416442|33418317","exon_intersect_chr6:33416442|33418317"]
["chr6:34057881|34069335:+","chr6:34056683|34057881:+_chr6:34069335|34070463:+","UN_GRM4_LS0017","GRM4","protein coding gene","no",2.16,0,0,0.007,64,0,0,"0(0)","OV","no","TE_intersect_:34057707|chr6|34057707|34057907|MIRb:MIR:SINE|283|+","NA","intron_intersect_chr6:34056684|34058974","intron_intersect_chr6:34063635|34091584"]
["chr6:34279968|34280119:+","chr6:34279704|34279968:+_chr6:34280119|34286768:+","UN_NUDT3_LS0001","NUDT3","protein coding gene","no",4.03,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:34279679|34288931","exon_intersect_chr6:34279679|34288931"]
["chr6:34424802|34425134:+","chr6:34421675|34421811:+_chr6:34424675|34424802:+_chr6:34425134|34425223:+","UN_RPS10-NUDT3_LS0081","RPS10-NUDT3","protein coding gene","no",7.16,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:34424276|34424840","exon_intersect_chr6:34425072|34425221"]
["chr6:35449910|35450153:+","chr6:35436689|35436787:+_chr6:35443044|35443172:+_chr6:35443358|35443602:+_chr6:35445963|35446374:+_chr6:35446479|35446589:+_chr6:35449766|35449910:+_chr6:35450153|35450560:+","UN_FANCE_UP_LS0001","FANCE","protein coding gene","no",4.79,0,0,0.01,98,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr6:35630749|35637014:-","chr6:35573590|35575942:-_chr6:35576994|35577233:-_chr6:35580036|35580221:-_chr6:35587034|35587117:-_chr6:35591130|35591220:-_chr6:35597248|35597404:-_chr6:35619096|35619210:-_chr6:35620132|35620274:-_chr6:35630677|35630749:-_chr6:35637014|35640682:-","UN_FKBP5_LS0031","FKBP5","protein coding gene","no",1.02,0.07,0,0.006,53,0.003,2,"0(0)","LAML","no","NA","TE_intersect_:35630669|chr6|35630669|35630751|MIR:MIR:SINE|183|+","exon_intersect_chr6:35637014|35637158","intron_intersect_chr6:35620274|35637014"]
["chr6:36080086|36102571:+","chr6:36075865|36075962:+_chr6:36076537|36080086:+_chr6:36102571|36102649:+_chr6:36107455|36107628:+_chr6:36108380|36110755:+","UN_MAPK14_LS0023","MAPK14","protein coding gene","no",3.43,0.04,0,0.005,49,0.001,1,"0(0)","LAML","no","TE_intersect_:36079952|chr6|36079952|36080236|AluSz:Alu:SINE|99|-","NA","intron_intersect_chr6:36076888|36091991","exon_intersect_chr6:36102571|36102649"]
["chr6:36792096|36793839:-","chr6:36740792|36742486:-_chr6:36743689|36743762:-_chr6:36744268|36744325:-_chr6:36745048|36745150:-_chr6:36745388|36745515:-_chr6:36746396|36746577:-_chr6:36748221|36748267:-_chr6:36753034|36753095:-_chr6:36756245|36756298:-_chr6:36762917|36762992:-_chr6:36765335|36765376:-_chr6:36774961|36775065:-_chr6:36778854|36778957:-_chr6:36792033|36792096:-_chr6:36793839|36793945:-","CPNE5_LS026","CPNE5","protein coding gene","no",2.06,0,0,0.003,30,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chr6:36792096|36794590","intron_intersect_chr6:36792096|36794590"]
["chr6:37547706|37547783:-","chr6:37535614|37543906:-_chr6:37545747|37545798:-_chr6:37546427|37547706:-_chr6:37547783|37548028:-_chr6:37548520|37549973:-","UN_AL353597.1_LS0002","AL353597.1","lncRNA gene","no",3.7,0,0,0.01,98,0,0,"0(0)","LGG","no","TE_intersect_:37547710|chr6|37547710|37547847|MIR:MIR:SINE|203|-","NA","intron_intersect_chr6:37547280|37549046","intron_intersect_chr6:37547280|37549046"]
["chr6:3861816|3869597:+","chr6:3861693|3861816:+_chr6:3869597|3870027:+","UN_AL391422.2_LS0004","AL391422.2","lncRNA gene","no",2.62,0,0,0.003,32,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr6:40523857|40529073:+","chr6:40521816|40521916:+_chr6:40523544|40523857:+_chr6:40529073|40529873:+","UN_LRFN2_LS0009","LRFN2","protein coding gene","no",3.64,0,0,0.001,12,0,0,"0(0)","KICH","no","TE_intersect_:40523855|chr6|40523855|40523948|MIRc:MIR:SINE|283|-","NA","exon_intersect_chr6:40523832|40523933","intron_intersect_chr6:40523933|40586941"]
["chr6:4140482|4141694:-","chr6:4138531|4140482:-_chr6:4141694|4141770:-_chr6:4153562|4153682:-_chr6:4155981|4156020:-","UN_AL136309.4_LS0002","AL136309.4","lncRNA gene","no",4.09,0,0,0.015,146,0,0,"0(0)","GBM;LGG","no","TE_intersect_:4141547|chr6|4141547|4141800|LTR16C:ERVL:LTR|274|-","NA","intron_intersect_chr6:4137402|4145537","intron_intersect_chr6:4137402|4145537"]
["chr6:41935976|41937258:+","chr6:41935745|41935976:+_chr6:41937258|41937387:+","UN_CCND3_LS0019","CCND3","protein coding gene","no",1.57,0,0,0.005,47,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:41934933|41936107","exon_intersect_chr6:41936784|41937394"]
["chr6:42902691|42903042:-","chr6:42893761|42894755:-_chr6:42901284|42901328:-_chr6:42902525|42902691:-_chr6:42903042|42903097:-","UN_C6orf226_UP_LS0005","C6orf226","protein coding gene","no",1.14,0,0,0.003,28,0,0,"0(0)","THYM","no","TE_intersect_:42902632|chr6|42902632|42903629|LTR5B:ERVK:LTR|65|-","TE_intersect_:42902632|chr6|42902632|42903629|LTR5B:ERVK:LTR|65|-","NA","NA"]
["chr6:43304244|43305223:+","chr6:43298247|43298345:+_chr6:43298620|43298751:+_chr6:43299092|43299274:+_chr6:43299390|43299493:+_chr6:43299627|43299781:+_chr6:43299898|43300066:+_chr6:43301135|43301258:+_chr6:43301583|43301687:+_chr6:43302200|43302414:+_chr6:43302655|43302763:+_chr6:43303085|43303247:+_chr6:43304038|43304244:+_chr6:43305223|43305545:+","UN_CRIP3_LS0010","CRIP3","protein coding gene","no",9.98,0,0,0.004,36,0,0,"0(0)","LIHC","no","NA","NA","exon_intersect_chr6:43304038|43304480","exon_intersect_chr6:43304671|43305538"]
["chr6:43990868|43998951:+","chr6:43990725|43990868:+_chr6:43998951|43999221:+","UN_C6orf223_UP_LS0043","C6orf223","protein coding gene","no",2.84,0,0,0.003,30,0,0,"0(0)","UCS","no","NA","TE_intersect_:43997915|chr6|43997915|43999279|LTR12C:ERV1:LTR|55|+","NA","intron_intersect_chr6:43997308|43999218"]
["chr6:44083294|44087106:+","chr6:44083082|44083294:+_chr6:44087106|44089243:+","UN_TMEM63B_UP_LS0009","TMEM63B","protein coding gene","no",9.96,0,0,0.02,193,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chr6:44253188|44253273:-","chr6:44251999|44252222:-_chr6:44253076|44253188:-_chr6:44253273|44253381:-","UN_HSP90AB1_LS0175","HSP90AB1","protein coding gene","no",54.19,0,0,0.008,81,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","exon_intersect_chr6:44253045|44253378","exon_intersect_chr6:44253045|44253378"]
["chr6:45106006|45176027:-","chr6:44809317|44809501:-_chr6:44829764|44829857:-_chr6:44900864|44900946:-_chr6:44932653|44932763:-_chr6:44950043|44950183:-_chr6:44953310|44953417:-_chr6:44954495|44954607:-_chr6:44961753|44961828:-_chr6:45003653|45003792:-_chr6:45014801|45014891:-_chr6:45020546|45020632:-_chr6:45105922|45106006:-_chr6:45176027|45176128:-","UN_SUPT3H_LS0028","SUPT3H","protein coding gene","no",1.32,0,0,0.003,32,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr6:45159511|45197674","exon_intersect_chr6:45105922|45106015"]
["chr6:4633262|4635913:+","chr6:4610656|4610812:+_chr6:4632934|4633262:+_chr6:4635913|4636166:+_chr6:4636621|4640103:+","UN_PSMC1P11_UP_LS0009","PSMC1P11","pseudogene","no",3.61,0,0,0.005,44,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:4633238|chr6|4633238|4633375|L1M5:L1:LINE|297|+","TE_intersect_:4635721|chr6|4635721|4635932|MER58A:hAT-Charlie:DNA|213|+","NA","NA"]
["chr6:4844503|4891713:+","chr6:4844361|4844503:+_chr6:4891713|4892379:+_chr6:4935515|4935771:+_chr6:4937565|4937737:+_chr6:4943546|4943756:+_chr6:4952266|4952409:+_chr6:4953898|4955543:+","UN_CDYL_LS0022","CDYL","protein coding gene","no",4.74,0,0,0.006,55,0,0,"0(0)","TGCT","no","TE_intersect_:4844384|chr6|4844384|4844579|L1PB1:L1:LINE|149|-","NA","intron_intersect_chr6:4836308|4889992","exon_intersect_chr6:4891713|4892379"]
["chr6:52311449|52420209:-","chr6:52310802|52311449:-_chr6:52420209|52420982:-","UN_MCM3_UP_LS0006","MCM3","protein coding gene","no",0.65,0,0,0.003,32,0,0,"0(0)","PCPG","no","NA","TE_intersect_:52311350|chr6|52311350|52311539|MIRc:MIR:SINE|313|+","NA","NA"]
["chr6:52834282|52840727:-","chr6:52831795|52831970:-_chr6:52832859|52832990:-_chr6:52834141|52834282:-_chr6:52840727|52840843:-_chr6:52846056|52846059:-","UN_GSTA5_LS0001","GSTA5","protein coding gene","no",6.67,0,0,0.005,46,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr6:52840727|52840843","intron_intersect_chr6:52834282|52836236"]
["chr6:54194371|54202105:+","chr6:54194269|54194371:+_chr6:54202105|54202206:+","UN_MLIP_LS0052","MLIP","protein coding gene","no",6.38,0,0,0.004,38,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr6:54189914|54202105","exon_intersect_chr6:54202105|54202233"]
["chr6:57504694|57515893:-","chr6:57504087|57504694:-_chr6:57515893|57516112:-","UN_PRIM2_LS0042","PRIM2","protein coding gene","no",7.05,0,0,0.003,31,0,0,"0(0)","PRAD","no","TE_intersect_:57515738|chr6|57515738|57516301|MLT1E2:ERVL-MaLR:LTR|236|-","NA","intron_intersect_chr6:57507454|57532411","intron_intersect_chr6:57497691|57505169"]
["chr6:63350841|63404506:-","chr6:63350262|63350841:-_chr6:63404506|63404601:-_chr6:63441304|63441438:-_chr6:63441715|63442442:-","UN_LGSN_UP_LS0018","LGSN","protein coding gene","no",4.35,0,0,0.014,134,0,0,"0(0)","LUAD;OV","no","TE_intersect_:63404433|chr6|63404433|63404769|MLT1A0:ERVL-MaLR:LTR|209|-","TE_intersect_:63350569|chr6|63350569|63350870|AluSx:Alu:SINE|133|+","NA","NA"]
["chr6:6537168|6564295:-","chr6:6537007|6537168:-_chr6:6564295|6564382:-","UN_LY86-AS1_LS0023","LY86-AS1","lncRNA gene","no",3.8,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:6564213|chr6|6564213|6564594|THE1D:ERVL-MaLR:LTR|127|-","NA","exon_intersect_chr6:6564295|6564388","intron_intersect_chr6:6535631|6564295"]
["chr6:6654596|6654635:-","chr6:6654497|6654596:-_chr6:6654635|6654978:-","UN_LY86_LS0018","LY86","protein coding gene","no",25.25,0,0,0.003,29,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr6:6654544|6654983","exon_intersect_chr6:6654544|6654983"]
["chr6:70281464|70281566:-","chr6:70216107|70217081:-_chr6:70225932|70226009:-_chr6:70232583|70232771:-_chr6:70234539|70234593:-_chr6:70234794|70234940:-_chr6:70239254|70239286:-_chr6:70240689|70240733:-_chr6:70241419|70241454:-_chr6:70241964|70242035:-_chr6:70242662|70242715:-_chr6:70252120|70252173:-_chr6:70252262|70252315:-_chr6:70253385|70253429:-_chr6:70254476|70254529:-_chr6:70254963|70255016:-_chr6:70255150|70255203:-_chr6:70255337|70255390:-_chr6:70256768|70256821:-_chr6:70260657|70260710:-_chr6:70263244|70263297:-_chr6:70266717|70266770:-_chr6:70268804|70268860:-_chr6:70269633|70269665:-_chr6:70270314|70270367:-_chr6:70271655|70271708:-_chr6:70272065|70272088:-_chr6:70274047|70274082:-_chr6:70274719|70274772:-_chr6:70280812|70280874:-_chr6:70281004|70281039:-_chr6:70281390|70281464:-_chr6:70281566|70281908:-","UN_COL9A1_LS0017","COL9A1","protein coding gene","no",18.73,0,0,0.003,31,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr6:70281464|70282898","intron_intersect_chr6:70281464|70282898"]
["chr6:72404690|72405363:+","chr6:72404513|72404690:+_chr6:72405363|72405419:+_chr6:72464264|72464893:+","UN_FO393414.2_UP_LS0003","FO393414.2","pseudogene","no",25.72,0.53,0,0.007,71,0.001,1,"0(0)","KICH","no","NA","TE_intersect_:72405122|chr6|72405122|72405588|MER1A:hAT-Charlie:DNA|116|+","NA","NA"]
["chr6:72622587|72677095:+","chr6:72622419|72622587:+_chr6:72677095|72677214:+_chr6:72678354|72678880:+","UN_KCNQ5_LS0001","KCNQ5","protein coding gene","no",3.32,0,0,0.023,217,0,0,"0(0)","DLBC;ESCA;HNSC;LUSC;SKCM;UVM","no","NA","NA","intron_intersect_chr6:72622587|72630495","exon_intersect_chr6:72677095|72677214"]
["chr6:73363623|73363657:+","chr6:73362677|73362898:+_chr6:73363095|73363274:+_chr6:73363556|73363623:+_chr6:73363657|73364171:+","UN_KHDC3L_LS0004","KHDC3L","protein coding gene","no",428.96,0,0,0.005,51,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr6:73363556|73364171","exon_intersect_chr6:73363556|73364171"]
["chr6:73517843|73518036:+","chr6:73517642|73517843:+_chr6:73518036|73518257:+","UN_EEF1A1_LS0085","EEF1A1","protein coding gene","yes",113.99,0,0,0.015,145,0,0,"0(0)","ESCA;OV;STAD","no","NA","NA","exon_intersect_chr6:73515750|73517934","exon_intersect_chr6:73518026|73518610"]
["chr6:7432095|7452565:+","chr6:7431918|7432095:+_chr6:7452565|7452793:+","UN_AL138878.1_UP_LS0014","AL138878.1","pseudogene","no",2.53,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","TE_intersect_:7452383|chr6|7452383|7453147|LTR1B:ERV1:LTR|121|+","NA","NA"]
["chr6:74941421|74944956:-","chr6:74938063|74941421:-_chr6:74944956|74945113:-_chr6:75075944|75076198:-","UN_AL356473.1_UP_LS0009","AL356473.1","pseudogene","no",2.65,0,0,0.015,141,0,0,"0(0)","LUSC","no","NA","NA","NA","NA"]
["chr6:7585013|7585098:-","chr6:7584360|7584595:-_chr6:7584738|7585013:-_chr6:7585098|7585413:-_chr6:7585477|7585645:-","UN_DSP_LS0116","DSP","protein coding gene","yes",3.15,0,0,0.006,56,0,0,"0(0)","ESCA;HNSC","no","NA","NA","exon_intersect_chr6:7582642|7586717","exon_intersect_chr6:7582642|7586717"]
["chr6:77719972|77725299:-","chr6:77716719|77717998:-_chr6:77719695|77719972:-_chr6:77725299|77725375:-_chr6:77726046|77726355:-","UN_MEI4_LS0004","MEI4","protein coding gene","no",3.36,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:77717999|chr6|77717999|77725406|HERVK-int:ERVK:LTR|4|-","TE_intersect_:77717999|chr6|77717999|77725406|HERVK-int:ERVK:LTR|4|-","intron_intersect_chr6:77690903|77761130","intron_intersect_chr6:77690903|77761130"]
["chr6:79312480|79312920:-","chr6:79274166|79276654:-_chr6:79312368|79312480:-_chr6:79312920|79313399:-","UN_RF00019_UP_LS1699","RF00019","small non-coding RNA gene","no",1.13,0,0,0.004,40,0,0,"0(0)","CHOL","no","TE_intersect_:79311476|chr6|79311476|79313200|HERVL18-int:ERVL:LTR|178|-","TE_intersect_:79311476|chr6|79311476|79313200|HERVL18-int:ERVL:LTR|178|-","NA","NA"]
["chr6:80531876|80548530:-","chr6:80531770|80531876:-_chr6:80548530|80548789:-","UN_AL596028.1_UP_LS0001","AL596028.1","pseudogene","no",4.41,0,0,0.01,97,0,0,"0(0)","SARC","no","NA","NA","NA","NA"]
["chr6:83592538|83601271:-","chr6:83552891|83554285:-_chr6:83560104|83560208:-_chr6:83560864|83560947:-_chr6:83575010|83575121:-_chr6:83576023|83576053:-_chr6:83580450|83580599:-_chr6:83582222|83582356:-_chr6:83591211|83591294:-_chr6:83592455|83592538:-_chr6:83601271|83601438:-_chr6:83601585|83601599:-_chr6:83605685|83605803:-_chr6:83607699|83607808:-_chr6:83610650|83610677:-_chr6:83616969|83617039:-_chr6:83623301|83623342:-_chr6:83641096|83641202:-_chr6:83656754|83656865:-_chr6:83658999|83659092:-_chr6:83661502|83661604:-_chr6:83662347|83662422:-_chr6:83665439|83665581:-_chr6:83707798|83707957:-_chr6:83708665|83708713:-","UN_SNAP91_LS0009","SNAP91","protein coding gene","no",1.93,0,0,0.002,20,0,0,"0(0)","PCPG","no","NA","NA","exon_intersect_chr6:83601271|83601438","intron_intersect_chr6:83592538|83592946"]
["chr6:8493778|8558585:+","chr6:8493166|8493478:+_chr6:8493685|8493778:+_chr6:8558585|8558643:+_chr6:8784191|8784337:+_chr6:8785117|8785439:+","UN_AL591485.1_LS0014","AL591485.1","no","no",2.26,0,0,0.005,45,0,0,"0(0)","SKCM","no","TE_intersect_:8493528|chr6|8493528|8493799|MLT1L:ERVL-MaLR:LTR|249|-","NA","NA","NA"]
["chr6:88055965|88077285:-","chr6:87954677|87954967:-_chr6:88055846|88055965:-_chr6:88077285|88077417:-_chr6:88095269|88095401:-","UN_RF00019_UP_LS1726","RF00019","small non-coding RNA gene","no",5.93,0,0,0.004,43,0,0,"0(0)","UVM","no","NA","TE_intersect_:88055689|chr6|88055689|88055998|AluSc:Alu:SINE|94|+","NA","intron_intersect_chr6:88054002|88057612"]
["chr6:88073054|88077285:-","chr6:88072886|88073054:-_chr6:88077285|88077417:-_chr6:88095269|88095385:-","UN_RF00019_UP_LS1728","RF00019","small non-coding RNA gene","no",4.41,0,0,0.002,16,0,0,"0(0)","UVM","no","NA","NA","NA","NA"]
["chr6:88363992|88420944:-","chr6:88312033|88315113:-_chr6:88315584|88315733:-_chr6:88324000|88324145:-_chr6:88363148|88363237:-_chr6:88363825|88363992:-_chr6:88420944|88421498:-","UN_AL139042.1_LS0040","AL139042.1","lncRNA gene","no",0.44,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:88420266|chr6|88420266|88420974|HERV17-int:ERV1:LTR|66|-","TE_intersect_:88363825|chr6|88363825|88364035|MIRc:MIR:SINE|284|+","exon_intersect_chr6:88420944|88421033","intron_intersect_chr6:88324145|88420944"]
["chr6:90707724|90709022:+","chr6:90707559|90707724:+_chr6:90709022|90710423:+","UN_MIR4643_UP_LS0027","MIR4643","small non-coding RNA gene","no",2.96,0,0,0.003,30,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr6:93830568|93833262:-","chr6:93830463|93830568:-_chr6:93833262|93833459:-","UN_EPHA7_UP_LS0022","EPHA7","protein coding gene","no",1.82,0,0,0.002,15,0,0,"0(0)","ESCA","no","TE_intersect_:93832391|chr6|93832391|93835296|HERVH-int:ERV1:LTR|93|-","TE_intersect_:93830561|chr6|93830561|93830887|HERVH-int:ERV1:LTR|76|-","NA","NA"]
["chr6:95924150|96014927:-","chr6:95916952|95922873:-_chr6:95924051|95924150:-_chr6:96014927|96015064:-_chr6:96015287|96015459:-","UN_AL607077.1_UP_LS0010","AL607077.1","pseudogene","no",2.63,0,0,0.003,27,0,0,"0(0)","LGG","no","NA","TE_intersect_:95923370|chr6|95923370|95924543|L1MD2:L1:LINE|295|-","NA","NA"]
["chr6:97979633|97998859:+","chr6:97978978|97979633:+_chr6:97998859|97998875:+","UN_AL589740.1_LS0042","AL589740.1","lncRNA gene","no",1.42,0,0,0.002,21,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr6:97969466|98024531","intron_intersect_chr6:97969466|98024531"]
["chr7:100160959|100163784:-","chr7:100159245|100160959:-_chr7:100163784|100166805:-_chr7:100166971|100167230:-","UN_GAL3ST4_LS0008","GAL3ST4","protein coding gene","no",1.99,0,0,0.013,128,0.003,2,"0(0)","THYM","no","TE_intersect_:100163533|chr7|100163533|100163833|AluJo:Alu:SINE|193|-","NA","intron_intersect_chr7:100160959|100166502","intron_intersect_chr7:100160959|100166502"]
["chr7:100523242|100523670:-","chr7:100522185|100523242:-_chr7:100523670|100524701:-","UN_TSC22D4_UP_LS0036","TSC22D4","protein coding gene","no",2.29,0,0,0.002,22,0,0,"0(0)","ESCA","no","TE_intersect_:100522216|chr7|100522216|100524615|SVA_D:SVA:Retroposon|26|-","TE_intersect_:100522216|chr7|100522216|100524615|SVA_D:SVA:Retroposon|26|-","NA","NA"]
["chr7:100721368|100721558:+","chr7:100721250|100721368:+_chr7:100721558|100721703:+_chr7:100721962|100722048:+_chr7:100722664|100722843:+_chr7:100722978|100723698:+","UN_EPO_LS0001","EPO","protein coding gene","no",1.88,0,0,0.003,31,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr7:100720993|100721558","exon_intersect_chr7:100721558|100721703"]
["chr7:100787939|100787975:+","chr7:100736208|100737080:+_chr7:100737262|100737349:+_chr7:100738461|100738613:+_chr7:100746538|100746702:+_chr7:100747550|100747641:+_chr7:100748137|100748215:+_chr7:100748324|100748470:+_chr7:100750625|100750896:+_chr7:100751182|100751266:+_chr7:100751712|100753229:+_chr7:100755226|100755410:+_chr7:100758202|100758343:+_chr7:100758534|100758650:+_chr7:100759721|100759845:+_chr7:100760391|100760536:+_chr7:100762215|100762358:+_chr7:100763806|100763916:+_chr7:100764027|100764196:+_chr7:100765352|100765554:+_chr7:100766525|100766666:+_chr7:100767010|100767257:+_chr7:100767831|100768011:+_chr7:100768610|100768721:+_chr7:100769880|100769974:+_chr7:100771844|100772020:+_chr7:100773285|100773493:+_chr7:100773721|100773865:+_chr7:100775328|100775575:+_chr7:100775669|100775833:+_chr7:100776440|100776564:+_chr7:100779446|100779750:+_chr7:100784623|100784834:+_chr7:100785985|100786141:+_chr7:100787889|100787939:+_chr7:100787975|100788136:+_chr7:100789218|100789347:+_chr7:100790942|100791113:+_chr7:100791966|100792148:+_chr7:100792405|100792544:+_chr7:100793820|100794018:+_chr7:100794120|100794258:+_chr7:100795196|100795336:+_chr7:100797363|100797465:+_chr7:100797577|100797623:+_chr7:100797707|100797797:+","UN_ZAN_LS0039","ZAN","protein coding gene","no",5.03,0,0,0.003,33,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr7:100787889|100788136","exon_intersect_chr7:100787889|100788136"]
["chr7:101066879|101072331:+","chr7:101066342|101066454:+_chr7:101066728|101066879:+_chr7:101072331|101072411:+_chr7:101072986|101074249:+","UN_TRIM56_UP_LS0007","TRIM56","protein coding gene","no",3.48,0,0,0.002,17,0,0,"0(0)","THYM","no","TE_intersect_:101066778|chr7|101066778|101067052|L4_B_Mam:RTE-X:LINE|319|-","NA","NA","NA"]
["chr7:101551730|101553326:+","chr7:101551605|101551730:+_chr7:101553326|101553376:+_chr7:101555787|101555871:+_chr7:101557370|101559024:+","UN_COL26A1_LS0017","COL26A1","protein coding gene","no",2.08,0,0,0.005,44,0,0,"0(0)","THYM","no","TE_intersect_:101551548|chr7|101551548|101551761|AluSx4:Alu:SINE|117|+","NA","intron_intersect_chr7:101551143|101553203","exon_intersect_chr7:101553203|101553376"]
["chr7:102483335|102582436:+","chr7:102483170|102483335:+_chr7:102582436|102582514:+_chr7:102681497|102681837:+","UN_SPDYE2B_UP_LS0008","SPDYE2B","protein coding gene","no",14.38,0,0,0.003,33,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr7:102482445|102483713","exon_intersect_chr7:102579425|102582892"]
["chr7:102976230|102978315:+","chr7:102973522|102973771:+_chr7:102975891|102976230:+_chr7:102978315|102978665:+","UN_FBXL13_LS0051","FBXL13","protein coding gene","yes",5.63,0,0,0.004,34,0,0,"0(0)","ACC","no","TE_intersect_:102974408|chr7|102974408|102977040|HERVH48-int:ERV1:LTR|102|+","TE_intersect_:102978119|chr7|102978119|102978321|HERVH48-int:ERV1:LTR|92|+","intron_intersect_chr7:102973771|102978381","intron_intersect_chr7:102973771|102978381"]
["chr7:103504524|103504665:+","chr7:103446280|103446519:+_chr7:103446617|103446668:+_chr7:103482164|103482329:+_chr7:103504404|103504524:+_chr7:103504665|103504813:+_chr7:103512769|103513895:+","UN_RELN_LS0017","RELN","protein coding gene","no",1.98,0,0,0.005,51,0,0,"0(0)","PRAD","no","TE_intersect_:103504465|chr7|103504465|103510637|L1PA7:L1:LINE|90|+","TE_intersect_:103504465|chr7|103504465|103510637|L1PA7:L1:LINE|90|+","intron_intersect_chr7:103504524|103510851","intron_intersect_chr7:103504524|103510851"]
["chr7:104747893|104752715:-","chr7:104738598|104738984:-_chr7:104744050|104747893:-_chr7:104752715|104758082:-_chr7:104759703|104759822:-_chr7:104799818|104800069:-_chr7:104802839|104802963:-_chr7:104803956|104804084:-","UN_LHFPL3_LS0046","LHFPL3","protein coding gene","no",16.15,0,0,0.003,33,0,0,"0(0)","SKCM","no","TE_intersect_:104748901|chr7|104748901|104752819|HERVK-int:ERVK:LTR|14|-","NA","exon_intersect_chr7:104752715|104752803","intron_intersect_chr7:104744180|104752715"]
["chr7:104785785|104798337:-","chr7:104738598|104738955:-_chr7:104744050|104744180:-_chr7:104752715|104752803:-_chr7:104759703|104759822:-_chr7:104761478|104761580:-_chr7:104785220|104785372:-_chr7:104785731|104785785:-_chr7:104798337|104798407:-_chr7:104799818|104800069:-_chr7:104802839|104802963:-_chr7:104803956|104804084:-","UN_LHFPL3_LS0094","LHFPL3","protein coding gene","no",5.68,0,0,0.003,31,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr7:104798337|104798407","intron_intersect_chr7:104785785|104786518"]
["chr7:105339711|105339771:-","chr7:105332919|105339711:-_chr7:105339771|105383204:-","UN_SRPK2_LS0115","SRPK2","protein coding gene","no",5.72,0,0,0.003,33,0,0,"0(0)","LAML","no","TE_intersect_:105339742|chr7|105339742|105339778|Charlie1a:hAT-Charlie:DNA|216|+","NA","intron_intersect_chr7:105332896|105388648","intron_intersect_chr7:105332896|105388648"]
["chr7:106831590|106831993:+","chr7:106831489|106831590:+_chr7:106831993|106832189:+_chr7:106838075|106838469:+","UN_LINC02577_LS0031","LINC02577","lncRNA gene","no",1.54,0,0,0.007,69,0,0,"0(0)","OV","no","TE_intersect_:106830073|chr7|106830073|106835246|HERVH-int:ERV1:LTR|263|+","TE_intersect_:106830073|chr7|106830073|106835246|HERVH-int:ERV1:LTR|263|+","NA","NA"]
["chr7:108255794|108260182:+","chr7:108255194|108255794:+_chr7:108260182|108260348:+","UN_NRCAM_LS0036","NRCAM","protein coding gene","yes",3.85,0,0,0.011,106,0,0,"0(0)","ESCA;LUSC;TGCT","no","TE_intersect_:108255147|chr7|108255147|108256639|SVA_B:SVA:Retroposon|57|+","NA","intron_intersect_chr7:108243240|108271000","intron_intersect_chr7:108243240|108271000"]
["chr7:111329451|111413945:-","chr7:110663426|110663721:-_chr7:110886593|110886695:-_chr7:110963500|110963565:-_chr7:111329394|111329451:-_chr7:111413945|111414124:-","UN_IMMP2L_LS0052","IMMP2L","protein coding gene","no",1.98,0,0,0.003,27,0,0,"0(0)","GBM","no","TE_intersect_:111413700|chr7|111413700|111414052|LTR41C:ERVL:LTR|279|+","TE_intersect_:111329182|chr7|111329182|111330673|L1MC4:L1:LINE|258|+","intron_intersect_chr7:111411883|111483434","intron_intersect_chr7:111125454|111390571"]
["chr7:113638548|113639959:-","chr7:113637596|113638548:-_chr7:113639959|113642652:-","UN_SMIM30_UP_LS0019","SMIM30","protein coding gene","no",1.94,0,0,0.012,112,0,0,"0(0)","SKCM","no","TE_intersect_:113639882|chr7|113639882|113640221|THE1A:ERVL-MaLR:LTR|125|-","TE_intersect_:113638520|chr7|113638520|113638774|L1M2:L1:LINE|325|-","NA","NA"]
["chr7:115030768|115031787:+","chr7:115030632|115030768:+_chr7:115031787|115031825:+_chr7:115118733|115118825:+_chr7:115122178|115122247:+_chr7:115125443|115125935:+","UN_LINC01393_UP_LS0006","LINC01393","lncRNA gene","no",1,0,0,0.018,169,0,0,"0(0)","ESCA;LUAD;LUSC;OV;THYM","no","TE_intersect_:115025114|chr7|115025114|115031115|L1PA2:L1:LINE|27|-","TE_intersect_:115031657|chr7|115031657|115032005|L2:L2:LINE|381|-","NA","NA"]
["chr7:117675981|117715758:+","chr7:117675721|117675981:+_chr7:117715758|117715971:+_chr7:117719281|117719372:+_chr7:117729431|117729652:+_chr7:117729740|117730061:+","CFTR_LS043","CFTR","protein coding gene","yes",5.77,0,0,0.006,61,0,0,"0(0)","COAD;READ","yes","TE_intersect_:117675772|chr7|117675772|117676061|MSTD:ERVL-MaLR:LTR|151|+","NA","intron_intersect_chr7:117668665|117689713","exon_intersect_chr7:117715758|117715971"]
["chr7:119499628|119499974:-","chr7:119483210|119486040:-_chr7:119499508|119499628:-_chr7:119499974|119500109:-_chr7:119513394|119513640:-","UN_AC079791.1_UP_LS0020","AC079791.1","pseudogene","no",4.18,0,0,0.009,89,0,0,"0(0)","LIHC","no","NA","NA","NA","NA"]
["chr7:120752432|120753988:-","chr7:120746738|120746906:-_chr7:120751817|120752018:-_chr7:120752324|120752432:-_chr7:120753988|120754135:-_chr7:120780347|120780525:-_chr7:120782338|120782585:-","UN_AC004872.1_UP_LS0013","AC004872.1","lncRNA gene","no",3.14,0,0,0.009,90,0,0,"0(0)","OV;TGCT","no","NA","NA","NA","exon_intersect_chr7:120752324|120752514"]
["chr7:121329878|121330354:-","chr7:121329806|121329878:-_chr7:121330354|121330590:-","UN_WNT16_LS0005","WNT16","protein coding gene","no",2.81,0,0,0.005,46,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr7:121329817|121331678","intron_intersect_chr7:121329817|121331678"]
["chr7:123137301|123143700:-","chr7:123113531|123115655:-_chr7:123117471|123117608:-_chr7:123119081|123119242:-_chr7:123123126|123123235:-_chr7:123125569|123125675:-_chr7:123128845|123128946:-_chr7:123129383|123129481:-_chr7:123134410|123134529:-_chr7:123137269|123137301:-_chr7:123143700|123143825:-_chr7:123147159|123147310:-_chr7:123168374|123168422:-_chr7:123168504|123168561:-_chr7:123169148|123169335:-_chr7:123171768|123171904:-_chr7:123180973|123181101:-_chr7:123190458|123190613:-_chr7:123199848|123199971:-","UN_SLC13A1_LS0004","SLC13A1","protein coding gene","no",7.23,0,0,0.003,25,0,0,"0(0)","KIRP","no","TE_intersect_:123142915|chr7|123142915|123143794|L1MA2:L1:LINE|208|-","TE_intersect_:123137212|chr7|123137212|123137753|MLT1E1A:ERVL-MaLR:LTR|219|+","intron_intersect_chr7:123134529|123147159","intron_intersect_chr7:123134529|123147159"]
["chr7:124274998|124411945:-","chr7:124274679|124274998:-_chr7:124411945|124412103:-_chr7:124459123|124459322:-","UN_TMEM229A_UP_LS0003","TMEM229A","protein coding gene","no",4.24,0,0,0.004,41,0,0,"0(0)","KIRC","no","NA","TE_intersect_:124274629|chr7|124274629|124275050|MLT1F2:ERVL-MaLR:LTR|256|-","NA","intron_intersect_chr7:124274998|124287215"]
["chr7:125637195|125637318:+","chr7:125635454|125636245:+_chr7:125637021|125637195:+_chr7:125637318|125638326:+","UN_AC003975.1_UP_LS0016","AC003975.1","lncRNA gene","no",2.99,0,0,0.006,55,0,0,"0(0)","KIRP","no","TE_intersect_:125637118|chr7|125637118|125637351|LTR33:ERVL:LTR|325|+","TE_intersect_:125637118|chr7|125637118|125637351|LTR33:ERVL:LTR|325|+","NA","NA"]
["chr7:128080498|128081360:+","chr7:128080311|128080498:+_chr7:128081360|128081501:+_chr7:128084724|128084847:+_chr7:128085711|128085780:+_chr7:128086938|128087051:+_chr7:128089489|128089692:+_chr7:128091837|128091881:+_chr7:128091993|128092607:+","UN_SND1_LS0055","SND1","protein coding gene","no",14.77,0,0,0.002,21,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr7:128074690|128081360","exon_intersect_chr7:128081360|128081501"]
["chr7:128450445|128455511:-","chr7:128398490|128398613:-_chr7:128400095|128400182:-_chr7:128400333|128400539:-_chr7:128400817|128400891:-_chr7:128401015|128401116:-_chr7:128403706|128403754:-_chr7:128405767|128405865:-_chr7:128409756|128409868:-_chr7:128410226|128410461:-_chr7:128434045|128434119:-_chr7:128450302|128450445:-_chr7:128455511|128455527:-","UN_RNU7-54P_UP_LS0005","RNU7-54P","small non-coding RNA gene","no",1.91,0,0,0.005,44,0,0,"0(0)","OV","no","NA","TE_intersect_:128450093|chr7|128450093|128450448|L1MEd:L1:LINE|262|-","NA","NA"]
["chr7:128888963|128895976:+","chr7:128888921|128888963:+_chr7:128895976|128896116:+_chr7:128899777|128899916:+","UN_KCP_LS0120","KCP","protein coding gene","no",3.67,0,0,0.009,90,0,0,"0(0)","THCA","no","NA","TE_intersect_:128895517|chr7|128895517|128896053|MER41A:ERV1:LTR|67|+","exon_intersect_chr7:128888863|128889039","intron_intersect_chr7:128894293|128902777"]
["chr7:129457012|129457823:+","chr7:129434510|129434601:+_chr7:129440022|129440091:+_chr7:129444024|129444098:+_chr7:129451613|129451747:+_chr7:129453227|129453347:+_chr7:129454142|129454210:+_chr7:129454421|129454527:+_chr7:129455244|129455371:+_chr7:129456439|129456642:+_chr7:129456889|129457012:+_chr7:129457823|129458450:+_chr7:129458712|129458777:+_chr7:129459517|129459580:+_chr7:129460301|129460372:+_chr7:129462650|129462730:+_chr7:129462966|129463040:+_chr7:129464044|129464141:+_chr7:129464612|129464738:+_chr7:129467350|129467450:+_chr7:129470649|129470715:+_chr7:129480785|129480889:+_chr7:129482842|129483046:+_chr7:129485579|129488399:+","UN_STRIP2_LS0014","STRIP2","protein coding gene","no",5.07,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","TE_intersect_:129457785|chr7|129457785|129457987|Tigger19a:TcMar-Tigger:DNA|254|+","intron_intersect_chr7:129456642|129458215","intron_intersect_chr7:129456642|129458215"]
["chr7:130320531|130320636:-","chr7:130319517|130320531:-_chr7:130320636|130320765:-_chr7:130351529|130351695:-","UN_CPA4_LS0011","CPA4","protein coding gene","no",3.42,0,0,0.012,113,0,0,"0(0)","GBM;LGG;SARC;UCS","no","NA","NA","intron_intersect_chr7:130312122|130322489","intron_intersect_chr7:130312122|130322489"]
["chr7:130959970|130961123:-","chr7:130943961|130945835:-_chr7:130959869|130959970:-_chr7:130961123|130961312:-","UN_AC016831.6_LS0028","AC016831.6","lncRNA gene","no",1.53,0,0,0.01,96,0,0,"0(0)","DLBC","no","NA","TE_intersect_:130959691|chr7|130959691|130959991|AluSx:Alu:SINE|123|+","intron_intersect_chr7:130945835|130967389","intron_intersect_chr7:130945835|130967389"]
["chr7:131111652|131124752:-","chr7:131110730|131111652:-_chr7:131124752|131124961:-","UN_MKLN1_LS0002","MKLN1","protein coding gene","no",4.43,0,0,0.002,15,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr7:131110207|131142820","intron_intersect_chr7:131110207|131142820"]
["chr7:132984805|132986130:+","chr7:132983611|132984805:+_chr7:132986130|132987936:+","UN_CHCHD3_LS0018","CHCHD3","protein coding gene","no",10.41,0,0,0.003,31,0,0,"0(0)","TGCT","no","TE_intersect_:132984019|chr7|132984019|132986416|SVA_D:SVA:Retroposon|24|+","TE_intersect_:132984019|chr7|132984019|132986416|SVA_D:SVA:Retroposon|24|+","intron_intersect_chr7:132975286|133022406","intron_intersect_chr7:132975286|133022406"]
["chr7:133795|134037:+","chr7:132191|132543:+_chr7:133651|133795:+_chr7:134037|134119:+_chr7:134345|134391:+_chr7:135066|135847:+","UN_AC093627.4_UP_LS0007","AC093627.4","lncRNA gene","no",7.02,0,0,0.002,19,0,0,"0(0)","GBM","no","NA","NA","NA","NA"]
["chr7:134007835|134064295:+","chr7:133817333|133817544:+_chr7:133895599|133895735:+_chr7:133917583|133917738:+_chr7:133937891|133938069:+_chr7:133997492|133997633:+_chr7:134004912|134005090:+_chr7:134007676|134007835:+_chr7:134064295|134065761:+","UN_EXOC4_LS0044","EXOC4","protein coding gene","no",15.77,0,0,0.002,20,0,0,"0(0)","CHOL","no","NA","NA","exon_intersect_chr7:134007676|134007939","exon_intersect_chr7:134064291|134065759"]
["chr7:134213002|134221779:+","chr7:134212909|134213002:+_chr7:134221779|134221918:+_chr7:134247556|134247644:+_chr7:134248951|134249076:+_chr7:134258257|134258405:+_chr7:134263845|134264116:+","UN_LRGUK_LS0014","LRGUK","protein coding gene","no",4.28,0,0,0.021,205,0,0,"0(0)","SKCM","no","TE_intersect_:134212936|chr7|134212936|134213132|L2b:L2:LINE|397|-","NA","intron_intersect_chr7:134201576|134221779","exon_intersect_chr7:134221779|134221918"]
["chr7:135266277|135307154:-","chr7:135251867|135254250:-_chr7:135255315|135255404:-_chr7:135263709|135263881:-_chr7:135266166|135266277:-_chr7:135307154|135307310:-_chr7:135310565|135310706:-_chr7:135315778|135315974:-_chr7:135317640|135317979:-","UN_AC009542.2_LS0011","AC009542.2","pseudogene","no",5.05,0,0,0.009,84,0,0,"0(0)","KIRC;OV","no","NA","TE_intersect_:135265954|chr7|135265954|135266443|MER44B:TcMar-Tigger:DNA|185|-","NA","NA"]
["chr7:137916885|137917009:+","chr7:137916782|137916885:+_chr7:137917009|137917133:+_chr7:137918236|137918333:+_chr7:137919939|137920015:+_chr7:137921222|137922383:+","UN_CREB3L2_LS0033","CREB3L2","protein coding gene","no",2.19,0,0,0.003,27,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chr7:137916012|137922590","intron_intersect_chr7:137916012|137922590"]
["chr7:138255735|138259128:+","chr7:138254678|138254777:+_chr7:138255667|138255735:+_chr7:138259128|138259921:+","UN_IMPDH1P3_UP_LS0008","IMPDH1P3","pseudogene","no",2.59,0,0,0.003,27,0,0,"0(0)","LIHC","no","TE_intersect_:138255375|chr7|138255375|138255835|MLT2A2:ERVL:LTR|90|+","NA","NA","NA"]
["chr7:139542700|139544231:+","chr7:139542532|139542700:+_chr7:139544231|139544996:+","UN_CLEC2L_LS0007","CLEC2L","protein coding gene","no",5.19,0,0,0.034,323,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC;OV;STAD;TGCT;UCS","no","NA","NA","intron_intersect_chr7:139542121|139544231","exon_intersect_chr7:139544231|139544984"]
["chr7:140573686|140573779:-","chr7:140516569|140518738:-_chr7:140519632|140519718:-_chr7:140521855|140522100:-_chr7:140523307|140523424:-_chr7:140525751|140525792:-_chr7:140527318|140527437:-_chr7:140544618|140544766:-_chr7:140546799|140546939:-_chr7:140555636|140555713:-_chr7:140558143|140558212:-_chr7:140559708|140559817:-_chr7:140567086|140567273:-_chr7:140568763|140568813:-_chr7:140569645|140569738:-_chr7:140573379|140573686:-_chr7:140573779|140574005:-_chr7:140585589|140585710:-_chr7:140587653|140587780:-_chr7:140601403|140602512:-","UN_DENND2A_LS0016","DENND2A","protein coding gene","no",1.71,0,0,0.004,38,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr7:140569738|140573808","intron_intersect_chr7:140569738|140573808"]
["chr7:142335396|142336718:-","chr7:142332478|142332735:-_chr7:142335235|142335396:-_chr7:142336718|142336815:-","UN_PRSS3P3_UP_LS0013","PRSS3P3","pseudogene","no",2.3,0,0,0.004,41,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr7:142657263|142670950:+","chr7:142656701|142656785:+_chr7:142656918|142657263:+_chr7:142670950|142674035:+","UN_TRBVA_UP_LS0001","TRBVA","no","no",2.19,0,0,0.008,74,0,0,"0(0)","PCPG","no","NA","NA","NA","exon_intersect_chr7:142670950|142671258"]
["chr7:142720728|142721709:+","chr7:142704120|142704514:+_chr7:142706932|142709185:+_chr7:142715567|142715733:+_chr7:142717071|142717180:+_chr7:142717557|142720728:+_chr7:142721709|142729185:+","UN_PGBD4P1_UP_LS0001","PGBD4P1","pseudogene","no",6.54,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr7:142720728|142720866","intron_intersect_chr7:142721192|142722358"]
["chr7:142788157|142788253:+","chr7:142544212|142544284:+_chr7:142544391|142544682:+_chr7:142787624|142787679:+_chr7:142788119|142788157:+_chr7:142788253|142788275:+_chr7:142791694|142792080:+_chr7:142792522|142792539:+_chr7:142792692|142792798:+_chr7:142793121|142793255:+","UN_TRBJ1-5_UP_LS0005","TRBJ1-5","no","no",7.1,0,0,0.002,23,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr7:142787064|142788508","intron_intersect_chr7:142787064|142788508"]
["chr7:14296174|14296561:+","chr7:14238244|14238408:+_chr7:14296057|14296174:+_chr7:14296561|14303415:+","UN_DGKB_LS0011","DGKB","protein coding gene","no",5.61,0,0,0.006,59,0,0,"0(0)","GBM;LGG","no","TE_intersect_:14296038|chr7|14296038|14296329|AluSc:Alu:SINE|113|-","TE_intersect_:14296329|chr7|14296329|14296581|L1PA7:L1:LINE|76|-","intron_intersect_chr7:14269201|14338515","intron_intersect_chr7:14269201|14338515"]
["chr7:14387720|14394474:+","chr7:14376769|14377012:+_chr7:14380798|14381001:+_chr7:14382749|14382898:+_chr7:14387602|14387720:+_chr7:14394474|14394607:+_chr7:14405581|14409407:+","UN_DGKB_LS0031","DGKB","protein coding gene","no",1.5,0,0,0.004,43,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr7:14345391|14478161","intron_intersect_chr7:14345391|14478161"]
["chr7:146247010|146248668:-","chr7:146240554|146247010:-_chr7:146248668|146248954:-","UN_CNTNAP2_LS0016","CNTNAP2","protein coding gene","yes",2.57,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:146245713|chr7|146245713|146248812|HERVH-int:ERV1:LTR|107|-","TE_intersect_:146245713|chr7|146245713|146248812|HERVH-int:ERV1:LTR|107|-","intron_intersect_chr7:146208819|146311720","intron_intersect_chr7:146208819|146311720"]
["chr7:149729370|149729488:+","chr7:149715011|149715349:+_chr7:149719546|149719672:+_chr7:149720008|149720127:+_chr7:149720835|149720990:+_chr7:149721380|149721535:+_chr7:149722422|149722553:+_chr7:149722783|149722956:+_chr7:149723734|149723889:+_chr7:149724652|149724849:+_chr7:149725315|149725488:+_chr7:149725887|149726060:+_chr7:149728523|149728675:+_chr7:149729188|149729370:+_chr7:149729488|149730341:+_chr7:149730428|149731776:+_chr7:149733206|149734571:+","UN_KRBA1_LS0018","KRBA1","protein coding gene","no",1.42,0,0,0.01,93,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr7:149729370|149730040","intron_intersect_chr7:149729370|149730040"]
["chr7:150037234|150038662:+","chr7:150036139|150037234:+_chr7:150038662|150038881:+","UN_AC092666.1_UP_LS0012","AC092666.1","lncRNA gene","no",5.25,0,0,0.002,19,0,0,"0(0)","THYM","no","TE_intersect_:150037212|chr7|150037212|150037289|HERVE-int:ERV1:LTR|169|-","TE_intersect_:150038140|chr7|150038140|150038716|HERVE-int:ERV1:LTR|115|-","NA","NA"]
["chr7:150253206|150259167:+","chr7:150245868|150245934:+_chr7:150246838|150246935:+_chr7:150253004|150253206:+_chr7:150259167|150259641:+","UN_ACTR3C_LS0009","ACTR3C","protein coding gene","no",6.57,0,0,0.002,15,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr7:150249060|150284747","intron_intersect_chr7:150249060|150284747"]
["chr7:1504773|1506743:-","chr7:1499528|1499632:-_chr7:1499884|1500021:-_chr7:1500170|1500366:-_chr7:1502901|1503191:-_chr7:1503903|1504773:-_chr7:1506743|1507195:-","UN_INTS1_UP_LS0001","INTS1","protein coding gene","yes",1.44,0,0,0.001,13,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chr7:151436018|151436180:-","chr7:151427955|151430180:-_chr7:151435892|151436018:-_chr7:151436180|151436273:-","UN_CRYGN_LS0004","CRYGN","protein coding gene","no",1.57,0,0,0.005,47,0,0,"0(0)","THCA","no","NA","NA","exon_intersect_chr7:151436180|151436325","intron_intersect_chr7:151433639|151436180"]
["chr7:152585501|152586341:-","chr7:152584614|152585501:-_chr7:152586341|152586859:-","UN_KMT2C_UP_LS0016","KMT2C","protein coding gene","yes",1.25,0,0,0.001,14,0,0,"0(0)","ESCA","no","TE_intersect_:152586094|chr7|152586094|152587219|SVA_E:SVA:Retroposon|85|-","TE_intersect_:152584646|chr7|152584646|152586077|SVA_E:SVA:Retroposon|81|-","NA","NA"]
["chr7:154595485|154637821:+","chr7:154595124|154595485:+_chr7:154637821|154637873:+_chr7:154669360|154669441:+_chr7:154727767|154727887:+_chr7:154769417|154769571:+_chr7:154772845|154772942:+_chr7:154794079|154794202:+_chr7:154795845|154795883:+_chr7:154801355|154801462:+_chr7:154803864|154803955:+_chr7:154804917|154804964:+_chr7:154806994|154807112:+_chr7:154853780|154853827:+_chr7:154867995|154868093:+_chr7:154872624|154872693:+_chr7:154875906|154876100:+_chr7:154880888|154880942:+_chr7:154885633|154885744:+_chr7:154887676|154887734:+_chr7:154889272|154889344:+_chr7:154889457|154889530:+_chr7:154892334|154893451:+","UN_DPP6_LS0031","DPP6","protein coding gene","no",2.5,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr7:154588631|154637821","exon_intersect_chr7:154637821|154637873"]
["chr7:155444420|155451167:-","chr7:155443478|155444420:-_chr7:155451167|155451322:-_chr7:155456990|155457099:-","UN_AC008060.3_LS0003","AC008060.3","lncRNA gene","no",3.11,0,0,0.011,104,0,0,"0(0)","GBM;SKCM","no","NA","TE_intersect_:155444403|chr7|155444403|155444687|L1MA2:L1:LINE|131|+","exon_intersect_chr7:155451167|155451322","intron_intersect_chr7:155421473|155451167"]
["chr7:156433110|156435755:-","chr7:156432234|156432879:-_chr7:156432970|156433110:-_chr7:156435755|156435892:-_chr7:156438833|156438995:-_chr7:156441230|156441380:-_chr7:156471155|156472711:-_chr7:156603051|156603195:-","UN_AC073133.1_LS0004","AC073133.1","lncRNA gene","no",2.57,0,0,0.007,64,0,0,"0(0)","PRAD","no","NA","TE_intersect_:156432979|chr7|156432979|156433276|AluY:Alu:SINE|111|-","intron_intersect_chr7:156432879|156435759","intron_intersect_chr7:156432879|156435759"]
["chr7:158316932|158317250:-","chr7:157539056|157540785:-_chr7:157548946|157549019:-_chr7:157568902|157568966:-_chr7:157571440|157571493:-_chr7:157576613|157576779:-_chr7:157578021|157578140:-_chr7:157595238|157595315:-_chr7:157604002|157604075:-_chr7:157621362|157621509:-_chr7:157656357|157656551:-_chr7:157682725|157682937:-_chr7:157898673|157898737:-_chr7:158081298|158081377:-_chr7:158110829|158110915:-_chr7:158133677|158134059:-_chr7:158136655|158136695:-_chr7:158138294|158138515:-_chr7:158166931|158167291:-_chr7:158192327|158192495:-_chr7:158205171|158205273:-_chr7:158316819|158316932:-_chr7:158317250|158317363:-","UN_PTPRN2_LS0132","PTPRN2","protein coding gene","no",1.7,0,0,0.006,60,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr7:158316932|158489735","intron_intersect_chr7:158316932|158489735"]
["chr7:158951596|158952018:+","chr7:158951350|158951596:+_chr7:158952018|158952163:+_chr7:158954106|158954211:+_chr7:158956112|158956470:+_chr7:158956583|158956683:+_chr7:158957217|158958698:+","UN_WDR60_LS0099","WDR60","protein coding gene","no",2.15,0,0,0.008,78,0,0,"0(0)","KIRC","no","NA","NA","intron_intersect_chr7:158946189|158956583","intron_intersect_chr7:158946189|158956583"]
["chr7:159016968|159017035:-","chr7:159016532|159016647:-_chr7:159016715|159016968:-_chr7:159017035|159017168:-_chr7:159017235|159017562:-","UN_LINC00689_LS0034","LINC00689","lncRNA gene","no",8.79,0,0,0.002,16,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr7:159016458|159017646","exon_intersect_chr7:159016458|159017646"]
["chr7:159018713|159018785:-","chr7:159017643|159018713:-_chr7:159018785|159020303:-","UN_LINC00689_LS0057","LINC00689","lncRNA gene","no",3.19,0,0,0.005,49,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chr7:159017646|159020307","intron_intersect_chr7:159017646|159020307"]
["chr7:16916388|17204703:+","chr7:16916354|16916388:+_chr7:17204703|17204765:+_chr7:17439667|17439731:+_chr7:17448881|17448948:+_chr7:17450995|17451061:+_chr7:17466152|17467056:+","AHR_LS001","AHR","protein coding gene","yes",0.98,0,0,0.005,46,0,0,"0(0)","LUAD","yes","TE_intersect_:16916145|chr7|16916145|16916862|LTR78:ERV1:LTR|290|+","NA","NA","NA"]
["chr7:1816228|1816541:-","chr7:1815816|1816228:-_chr7:1816541|1816640:-","UN_MAD1L1_LS0009","MAD1L1","protein coding gene","yes",8.59,0,0,0.001,12,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr7:1816228|1816987","intron_intersect_chr7:1816228|1816987"]
["chr7:1936897|1942885:-","chr7:1815797|1816228:-_chr7:1898200|1898390:-_chr7:1936687|1936897:-_chr7:1942885|1942934:-","UN_MAD1L1_LS0082","MAD1L1","protein coding gene","yes",4.28,0,0,0.005,48,0,0,"0(0)","OV","no","TE_intersect_:1942615|chr7|1942615|1943904|L1M4:L1:LINE|260|+","NA","intron_intersect_chr7:1940549|1957629","intron_intersect_chr7:1936897|1940088"]
["chr7:20380831|20391403:+","chr7:20331123|20331933:+_chr7:20363637|20363722:+_chr7:20367012|20367186:+_chr7:20379051|20379297:+_chr7:20380666|20380831:+_chr7:20391403|20391498:+_chr7:20394896|20394985:+_chr7:20398860|20398994:+_chr7:20401721|20402126:+_chr7:20404628|20404853:+_chr7:20406062|20406171:+_chr7:20409615|20409778:+_chr7:20409875|20410330:+","UN_ITGB8_LS0021","ITGB8","protein coding gene","no",1.99,0,0,0.008,75,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chr7:20379051|20382081","exon_intersect_chr7:20391403|20391498"]
["chr7:20960851|21020868:+","chr7:20960677|20960851:+_chr7:21020868|21021003:+_chr7:21021859|21021907:+_chr7:21022057|21022150:+_chr7:21023132|21023309:+_chr7:21033422|21033558:+_chr7:21048308|21048481:+_chr7:21048951|21049013:+_chr7:21066392|21066439:+_chr7:21067922|21067982:+_chr7:21069754|21069871:+_chr7:21074525|21074622:+_chr7:21077710|21077838:+_chr7:21077994|21078965:+","UN_LINC01162_LS0008","LINC01162","lncRNA gene","no",1.37,0,0,0.002,19,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr7:20882816|21020868","exon_intersect_chr7:21020868|21021003"]
["chr7:21185649|21206926:+","chr7:21185565|21185649:+_chr7:21206926|21206987:+_chr7:21208132|21208340:+_chr7:21209418|21209571:+_chr7:21212960|21213672:+","UN_RNU1-15P_UP_LS0020","RNU1-15P","small non-coding RNA gene","no",1.95,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","TE_intersect_:21206804|chr7|21206804|21207103|L3:CR1:LINE|315|-","NA","NA"]
["chr7:22510761|22553950:-","chr7:22510298|22510761:-_chr7:22553950|22553963:-","UN_STEAP1B_LS0140","STEAP1B","protein coding gene","no",8.29,0,0,0.006,60,0,0,"0(0)","ESCA;GBM","no","NA","NA","intron_intersect_chr7:22511999|22563337","exon_intersect_chr7:22510616|22511999"]
["chr7:2278305|2312404:-","chr7:2253060|2255169:-_chr7:2256874|2257023:-_chr7:2257365|2257514:-_chr7:2257735|2257803:-_chr7:2263230|2263362:-_chr7:2264298|2264458:-_chr7:2269559|2269639:-_chr7:2271850|2271971:-_chr7:2275112|2275229:-_chr7:2278100|2278305:-_chr7:2312404|2312571:-","UN_SNX8_LS0079","SNX8","protein coding gene","no",1.12,0,0,0.007,67,0,0,"0(0)","DLBC;SKCM;UVM","no","NA","NA","intron_intersect_chr7:2309946|2314328","intron_intersect_chr7:2278305|2287915"]
["chr7:23636723|23642931:+","chr7:23635697|23636723:+_chr7:23642931|23644704:+","UN_CCDC126_LS0015","CCDC126","protein coding gene","no",2.86,0,0,0.012,114,0,0,"0(0)","TGCT","no","TE_intersect_:23635903|chr7|23635903|23637198|SVA_E:SVA:Retroposon|81|+","NA","intron_intersect_chr7:23622826|23638162","exon_intersect_chr7:23642931|23644708"]
["chr7:24762240|24769207:-","chr7:24761175|24761439:-_chr7:24762129|24762240:-_chr7:24769207|24769503:-","UN_GSDME_UP_LS0008","GSDME","protein coding gene","no",2.14,0,0,0.003,27,0,0,"0(0)","TGCT","no","TE_intersect_:24769027|chr7|24769027|24769909|L1MCa:L1:LINE|165|+","TE_intersect_:24761976|chr7|24761976|24762264|AluJb:Alu:SINE|149|+","NA","NA"]
["chr7:25578155|25579221:-","chr7:25576275|25577124:-_chr7:25578080|25578155:-_chr7:25579221|25579917:-","UN_AC091705.1_UP_LS0006","AC091705.1","lncRNA gene","no",3.92,0,0,0.002,19,0,0,"0(0)","PCPG","no","NA","TE_intersect_:25578154|chr7|25578154|25578216|MER5C1:hAT-Charlie:DNA|194|+","NA","NA"]
["chr7:26263843|26270346:+","chr7:26261433|26262126:+_chr7:26263718|26263843:+_chr7:26270346|26276606:+","UN_AC010677.1_UP_LS0008","AC010677.1","pseudogene","no",2.95,0,0,0.002,19,0,0,"0(0)","ESCA","no","TE_intersect_:26263784|chr7|26263784|26264061|L2c:L2:LINE|304|+","TE_intersect_:26270256|chr7|26270256|26270743|Tigger1:TcMar-Tigger:DNA|115|-","NA","NA"]
["chr7:27147443|27148435:+","chr7:27147163|27147443:+_chr7:27148435|27148503:+_chr7:27151575|27151681:+_chr7:27152294|27155225:+","UN_HOXA3_LS0117","HOXA3","protein coding gene","no",0.51,0,0,0.007,64,0.003,2,"0(0)","KIRP","no","NA","NA","exon_intersect_chr7:27147308|27147774","intron_intersect_chr7:27147774|27150052"]
["chr7:27157288|27157418:-","chr7:27107008|27108720:-_chr7:27110115|27110760:-_chr7:27122559|27122642:-_chr7:27140083|27140186:-_chr7:27152288|27155222:-_chr7:27156167|27156754:-_chr7:27157118|27157288:-_chr7:27157418|27158026:-","UN_HOXA7_LS0008","HOXA7","protein coding gene","no",1.95,0,0,0.003,26,0,0,"0(0)","COAD","no","NA","NA","intron_intersect_chr7:27157288|27157824","intron_intersect_chr7:27157288|27157824"]
["chr7:29626045|29626834:+","chr7:29625279|29625422:+_chr7:29625903|29626045:+_chr7:29626834|29628639:+","UN_ZNRF2P2_LS0010","ZNRF2P2","pseudogene","no",0.84,0,0,0.006,59,0,0,"0(0)","THCA","no","NA","NA","intron_intersect_chr7:29625983|29650227","intron_intersect_chr7:29625983|29650227"]
["chr7:30771033|30778432:+","chr7:30770967|30771033:+_chr7:30778432|30778551:+_chr7:30781977|30782212:+_chr7:30785749|30785992:+_chr7:30791165|30791574:+_chr7:30828679|30828737:+_chr7:30836658|30836764:+_chr7:30839200|30839316:+_chr7:30840760|30840848:+_chr7:30850454|30850555:+_chr7:30852216|30852279:+_chr7:30853394|30853459:+_chr7:30859257|30859324:+_chr7:30872243|30872306:+_chr7:30875495|30875656:+_chr7:30882181|30882361:+_chr7:30882921|30882993:+_chr7:30891957|30892354:+","UN_INMT-MINDY4_LS0011","INMT-MINDY4","protein coding gene","no",1.44,0,0,0.01,95,0,0,"0(0)","OV;STAD","no","NA","NA","intron_intersect_chr7:30766561|30771417","exon_intersect_chr7:30778432|30778551"]
["chr7:31106734|31107405:+","chr7:31086971|31087003:+_chr7:31087627|31087696:+_chr7:31092644|31092735:+_chr7:31103237|31103366:+_chr7:31104868|31104909:+_chr7:31106496|31106734:+_chr7:31107405|31122598:+","UN_ADCYAP1R1_LS0010","ADCYAP1R1","protein coding gene","no",9.94,0.17,0,0.004,38,0.004,3,"0(0)","GBM","no","NA","NA","exon_intersect_chr7:31106496|31111479","exon_intersect_chr7:31106496|31111479"]
["chr7:32679130|32723513:-","chr7:32580935|32581313:-_chr7:32581572|32581664:-_chr7:32585977|32586136:-_chr7:32593184|32593306:-_chr7:32620404|32620484:-_chr7:32621013|32621072:-_chr7:32623361|32623439:-_chr7:32632543|32632620:-_chr7:32635252|32635351:-_chr7:32639274|32639365:-_chr7:32655987|32656044:-_chr7:32675932|32676025:-_chr7:32676788|32676908:-_chr7:32678993|32679130:-_chr7:32723513|32723607:-_chr7:32726350|32726470:-_chr7:32727324|32727426:-","UN_DPY19L1P1_LS0038","DPY19L1P1","pseudogene","no",1.22,0,0,0.005,50,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr7:32723513|32723607","intron_intersect_chr7:32679130|32716718"]
["chr7:34653746|34654299:-","chr7:34616953|34617003:-_chr7:34653657|34653746:-_chr7:34654299|34654571:-_chr7:34655222|34655482:-","UN_NPSR1-AS1_LS0025","NPSR1-AS1","lncRNA gene","no",4.93,0,0,0.011,107,0,0,"0(0)","ESCA;STAD","no","NA","NA","intron_intersect_chr7:34643351|34658239","intron_intersect_chr7:34643351|34658239"]
["chr7:35181502|35183501:-","chr7:35079308|35081740:-_chr7:35091847|35091946:-_chr7:35104644|35104763:-_chr7:35106044|35106068:-_chr7:35117748|35117794:-_chr7:35118661|35118789:-_chr7:35119649|35119720:-_chr7:35121507|35121608:-_chr7:35123998|35124078:-_chr7:35132310|35132369:-_chr7:35141033|35141119:-_chr7:35141882|35141959:-_chr7:35144991|35145090:-_chr7:35147791|35147882:-_chr7:35150088|35150274:-_chr7:35162001|35162094:-_chr7:35179018|35179155:-_chr7:35181415|35181502:-_chr7:35183501|35183525:-_chr7:35185720|35186301:-","UN_DPY19L2P1_LS0035","DPY19L2P1","pseudogene","no",3.91,0.01,0,0.005,50,0.001,1,"0(0)","PCPG","no","NA","NA","intron_intersect_chr7:35181501|35185721","intron_intersect_chr7:35181501|35185721"]
["chr7:35912703|35913162:+","chr7:35863552|35863658:+_chr7:35872666|35872766:+_chr7:35873641|35873775:+_chr7:35879823|35879940:+_chr7:35882484|35882576:+_chr7:35883891|35883987:+_chr7:35885828|35885879:+_chr7:35890668|35890793:+_chr7:35898248|35898383:+_chr7:35908707|35908780:+_chr7:35910936|35912703:+_chr7:35913162|35913243:+_chr7:35915646|35916089:+_chr7:35946292|35946379:+","UN_AC087072.2_UP_LS0007","AC087072.2","pseudogene","no",4.75,0,0,0.027,262,0,0,"0(0)","GBM;LGG;TGCT","no","NA","NA","NA","NA"]
["chr7:36532344|36540078:-","chr7:36532334|36532344:-_chr7:36540078|36540491:-_chr7:36548612|36548686:-_chr7:36549439|36549475:-_chr7:36576574|36576656:-_chr7:36594339|36594430:-_chr7:36616380|36616474:-_chr7:36618297|36618345:-_chr7:36620781|36620829:-_chr7:36621710|36621780:-_chr7:36623190|36623250:-_chr7:36632036|36632106:-_chr7:36637851|36637910:-_chr7:36659166|36659265:-_chr7:36673943|36674009:-_chr7:36686699|36686794:-_chr7:36724022|36724449:-","UN_AOAH_LS0020","AOAH","protein coding gene","no",3.56,0,0,0.003,25,0.001,1,"0(0)","LAML","no","NA","NA","intron_intersect_chr7:36532344|36540311","intron_intersect_chr7:36532344|36540311"]
["chr7:38104332|38115758:-","chr7:38103882|38104332:-_chr7:38115758|38115875:-","UN_SFRP4_UP_LS0001","SFRP4","protein coding gene","yes",4,0,0,0.004,38,0,0,"0(0)","SARC","no","TE_intersect_:38115599|chr7|38115599|38115898|AluJr:Alu:SINE|177|+","TE_intersect_:38104276|chr7|38104276|38104934|L1MEd:L1:LINE|311|+","NA","NA"]
["chr7:38984921|39002120:-","chr7:38979797|38981477:-_chr7:38984232|38984405:-_chr7:38984877|38984921:-_chr7:39002120|39002490:-","UN_POU6F2_LS0010","POU6F2","protein coding gene","yes",1.82,0,0,0.01,92,0,0,"0(0)","ESCA","no","NA","NA","intron_intersect_chr7:39002072|39005063","intron_intersect_chr7:38984921|39002012"]
["chr7:39433283|39504147:+","chr7:39085868|39086031:+_chr7:39204235|39204326:+_chr7:39207392|39207620:+_chr7:39339642|39340015:+_chr7:39433077|39433283:+_chr7:39504147|39504412:+","UN_YAE1_UP_LS0003","YAE1","protein coding gene","no",3.08,0,0,0.018,170,0,0,"0(0)","ESCA;READ;STAD","no","NA","NA","intron_intersect_chr7:39433283|39451533","NA"]
["chr7:39847271|39859864:+","chr7:39830481|39830978:+_chr7:39836091|39836212:+_chr7:39836700|39836911:+_chr7:39847199|39847271:+_chr7:39859864|39860073:+_chr7:39865558|39865730:+_chr7:39866303|39866431:+_chr7:39867946|39868897:+_chr7:39890507|39900868:+","UN_AC004987.3_LS0007","AC004987.3","pseudogene","no",4.18,0,0,0.007,70,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr7:39836911|39854494","intron_intersect_chr7:39855056|39866312"]
["chr7:40539682|40544110:-","chr7:40538127|40539682:-_chr7:40544110|40545459:-_chr7:40546714|40546928:-","UN_SUGCT_LS0060","SUGCT","protein coding gene","no",2.94,0,0,0.008,74,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chr7:40539682|40546714","intron_intersect_chr7:40539682|40546714"]
["chr7:42595720|42597448:-","chr7:42591123|42591522:-_chr7:42595652|42595720:-_chr7:42597448|42597551:-_chr7:42598231|42598349:-_chr7:42612728|42612886:-_chr7:42666324|42666458:-","UN_GLI3_UP_LS0017","GLI3","protein coding gene","yes",3.88,0,0,0.007,64,0,0,"0(0)","LIHC","no","NA","NA","NA","NA"]
["chr7:44113681|44114039:-","chr7:44113254|44113681:-_chr7:44114039|44114233:-_chr7:44114282|44114447:-","UN_AEBP1_LS0108","AEBP1","protein coding gene","no",2.61,0,0,0.003,25,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr7:44113594|44114562","exon_intersect_chr7:44113594|44114562"]
["chr7:44258926|44259208:-","chr7:44217151|44219522:-_chr7:44220060|44220294:-_chr7:44220616|44220710:-_chr7:44220826|44220901:-_chr7:44231006|44231054:-_chr7:44234390|44234461:-_chr7:44234639|44234679:-_chr7:44240707|44240749:-_chr7:44241700|44241783:-_chr7:44242218|44242340:-_chr7:44242560|44242654:-_chr7:44243250|44243333:-_chr7:44243425|44243527:-_chr7:44247120|44247192:-_chr7:44254542|44254607:-_chr7:44258872|44258926:-_chr7:44259208|44259566:-","UN_CAMK2B_LS0034","CAMK2B","protein coding gene","no",2.24,0,0,0.003,26,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr7:44258926|44259381","intron_intersect_chr7:44258926|44259381"]
["chr7:44801413|44801447:-","chr7:44801314|44801413:-_chr7:44801447|44801642:-","UN_PPIA_LS0022","PPIA","protein coding gene","no",163.08,0.38,0,0.002,19,0.001,1,"0(0)","DLBC","no","NA","NA","exon_intersect_chr7:44801287|44803117","exon_intersect_chr7:44801287|44803117"]
["chr7:45460970|45498975:+","chr7:45460755|45460970:+_chr7:45498975|45499269:+","UN_AC073325.1_LS0002","AC073325.1","lncRNA gene","no",8.92,0,0,0.005,48,0,0,"0(0)","BRCA","no","TE_intersect_:45460932|chr7|45460932|45461102|MIR1_Amn:MIR:SINE|331|+","TE_intersect_:45498771|chr7|45498771|45499338|LTR49:ERV1:LTR|126|+","intron_intersect_chr7:45460970|45529437","intron_intersect_chr7:45460970|45529437"]
["chr7:45859535|45859949:+","chr7:45855823|45856092:+_chr7:45859179|45859535:+_chr7:45859949|45862268:+","UN_IGFBP1_UP_LS0003","IGFBP1","protein coding gene","no",2.65,0,0,0.002,19,0,0,"0(0)","THYM","no","TE_intersect_:45859256|chr7|45859256|45859665|MLT1E2:ERVL-MaLR:LTR|206|+","NA","NA","NA"]
["chr7:45993877|45994290:+","chr7:45990905|45993877:+_chr7:45994290|45994392:+_chr7:46000540|46005609:+","UN_AC073115.1_LS0006","AC073115.1","lncRNA gene","no",2.95,0,0,0.01,99,0,0,"0(0)","KIRC","no","TE_intersect_:45993776|chr7|45993776|45994388|L2a:L2:LINE|287|-","TE_intersect_:45993776|chr7|45993776|45994388|L2a:L2:LINE|287|-","intron_intersect_chr7:45991077|45997540","intron_intersect_chr7:45991077|45997540"]
["chr7:47800879|47808247:-","chr7:47774483|47775166:-_chr7:47792627|47792797:-_chr7:47795989|47796150:-_chr7:47800649|47800879:-_chr7:47808247|47808387:-_chr7:47809473|47809577:-_chr7:47811817|47812051:-_chr7:47813121|47813237:-","UN_PKD1L1_LS0014","PKD1L1","protein coding gene","no",0.6,0,0,0.004,38,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr7:47808247|47808387","intron_intersect_chr7:47800879|47803210"]
["chr7:48526075|48528236:+","chr7:48525962|48526075:+_chr7:48528236|48528345:+_chr7:48580224|48580374:+_chr7:48587154|48587288:+_chr7:48594710|48594813:+_chr7:48615285|48615377:+_chr7:48643288|48643393:+_chr7:48644617|48644754:+_chr7:48645417|48647496:+","UN_ABCA13_LS0044","ABCA13","protein coding gene","no",4.62,0,0,0.006,53,0,0,"0(0)","OV","no","TE_intersect_:48526007|chr7|48526007|48526320|MER39B:ERV1:LTR|135|-","NA","intron_intersect_chr7:48524440|48528236","exon_intersect_chr7:48528236|48528345"]
["chr7:50196405|50197414:-","chr7:50195159|50196405:-_chr7:50197414|50197708:-","UN_AC020743.1_UP_LS0007","AC020743.1","lncRNA gene","no",2.91,0,0,0.002,19,0,0,"0(0)","DLBC","no","NA","TE_intersect_:50196179|chr7|50196179|50196584|MLT2D:ERVL:LTR|184|-","NA","NA"]
["chr7:5152222|5162472:-","chr7:5150395|5152222:-_chr7:5162472|5162588:-_chr7:5183154|5183318:-","UN_ZNF890P_UP_LS0002","ZNF890P","pseudogene","no",2.34,0,0,0.001,14,0,0,"0(0)","KICH","no","TE_intersect_:5162317|chr7|5162317|5162609|AluJo:Alu:SINE|192|+","NA","NA","NA"]
["chr7:53360558|53360774:-","chr7:53358963|53360558:-_chr7:53360774|53360866:-_chr7:53366066|53366201:-_chr7:53380527|53380741:-_chr7:53418797|53418923:-","UN_SGO1P2_UP_LS0006","SGO1P2","pseudogene","no",2.57,0,0,0.004,36,0,0,"0(0)","KIRP","no","TE_intersect_:53360710|chr7|53360710|53360882|MLT1G3:ERVL-MaLR:LTR|286|-","TE_intersect_:53360428|chr7|53360428|53360614|L2:L2:LINE|374|-","NA","NA"]
["chr7:54330818|54343641:+","chr7:54330779|54330818:+_chr7:54343641|54345357:+","UN_LINC01445_LS0003","LINC01445","lncRNA gene","no",1.7,0,0,0.002,21,0,0,"0(0)","GBM","no","TE_intersect_:54329994|chr7|54329994|54330847|MER21C:ERVL:LTR|196|-","NA","intron_intersect_chr7:54330818|54347294","intron_intersect_chr7:54330818|54347294"]
["chr7:54811996|54859534:-","chr7:54806433|54806924:-_chr7:54811833|54811996:-_chr7:54859534|54859758:-","UN_SEC61G_UP_LS0010","SEC61G","protein coding gene","no",2.81,0,0,0.007,68,0,0,"0(0)","LUAD","no","TE_intersect_:54859387|chr7|54859387|54859826|LTR16B2:ERVL:LTR|281|-","NA","NA","NA"]
["chr7:551470|552568:-","chr7:549750|550602:-_chr7:551389|551470:-_chr7:552568|561475:-","UN_PRKAR1B_LS0018","PRKAR1B","protein coding gene","no",3.96,0,0,0.005,44,0,0,"0(0)","KIRP","no","NA","NA","intron_intersect_chr7:551470|561958","intron_intersect_chr7:551470|561958"]
["chr7:5529213|5529235:+","chr7:5529161|5529213:+_chr7:5529235|5529391:+","UN_ACTB_LS0414","ACTB","protein coding gene","no",2.44,0,0,0.002,15,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr7:5528004|5529733","exon_intersect_chr7:5528004|5529733"]
["chr7:55750787|55751521:-","chr7:55740566|55742010:-_chr7:55743431|55748045:-_chr7:55748155|55748212:-_chr7:55750597|55750787:-_chr7:55751521|55751643:-_chr7:55757181|55757245:-_chr7:55758097|55759068:-_chr7:55760923|55761037:-_chr7:55761170|55761767:-","UN_FKBP9P1_UP_LS0034","FKBP9P1","pseudogene","no",2.45,0,0,0.006,53,0,0,"0(0)","ESCA","no","TE_intersect_:55751401|chr7|55751401|55751669|AluJr:Alu:SINE|198|+","TE_intersect_:55750631|chr7|55750631|55750806|AluJb:Alu:SINE|200|+","NA","NA"]
["chr7:56126102|56126264:-","chr7:56114681|56114897:-_chr7:56120241|56120306:-_chr7:56125993|56126102:-_chr7:56126264|56126334:-","UN_NUPR2_UP_LS0003","NUPR2","protein coding gene","no",3.4,0,0,0.003,24,0,0,"0(0)","ACC;SARC","no","NA","NA","NA","NA"]
["chr7:562010|562380:+","chr7:561958|562010:+_chr7:562380|562578:+_chr7:562756|562973:+_chr7:565101|565619:+","UN_PRKAR1B_LS0028","PRKAR1B","protein coding gene","no",1.25,0,0,0.003,28,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chr7:562010|565101","intron_intersect_chr7:562010|565101"]
["chr7:56399512|56402951:-","chr7:56373403|56374257:-_chr7:56374355|56378519:-_chr7:56378629|56378686:-_chr7:56380740|56380930:-_chr7:56381682|56381804:-_chr7:56387407|56387471:-_chr7:56391152|56391266:-_chr7:56399426|56399512:-_chr7:56402951|56403111:-_chr7:56408694|56409209:-_chr7:56423690|56424637:-_chr7:56426135|56426263:-_chr7:56426835|56427010:-_chr7:56428385|56428441:-_chr7:56432488|56432701:-_chr7:56448219|56448375:-","UN_SEPT14P24_UP_LS0193","SEPT14P24","pseudogene","no",15.73,0,0,0.009,91,0,0,"0(0)","OV","no","TE_intersect_:56402906|chr7|56402906|56403039|Charlie29a:hAT-Charlie:DNA|331|-","NA","NA","NA"]
["chr7:57468858|57480432:+","chr7:57450177|57450327:+_chr7:57462460|57462586:+_chr7:57463073|57463168:+_chr7:57468724|57468858:+_chr7:57480432|57481215:+","UN_AC092175.1_UP_LS0002","AC092175.1","pseudogene","no",3.72,0,0,0.002,21,0,0,"0(0)","TGCT","no","NA","TE_intersect_:57480431|chr7|57480431|57480802|THE1C:ERVL-MaLR:LTR|166|+","exon_intersect_chr7:57468724|57473546","NA"]
["chr7:6009498|6010634:+","chr7:6009316|6009498:+_chr7:6010634|6010771:+_chr7:6015146|6015352:+_chr7:6017814|6018045:+_chr7:6023303|6023695:+","UN_AIMP2_LS0006","AIMP2","protein coding gene","yes",1.75,0,0,0.006,60,0,0,"0(0)","GBM;OV","no","NA","TE_intersect_:6010441|chr7|6010441|6010748|AluSz:Alu:SINE|111|-","intron_intersect_chr7:6009498|6012679","intron_intersect_chr7:6009498|6012679"]
["chr7:64102133|64102576:+","chr7:64100251|64102133:+_chr7:64102576|64102928:+_chr7:64112666|64112785:+_chr7:64113089|64114429:+_chr7:64114873|64115019:+_chr7:64120410|64120545:+_chr7:64138862|64138924:+_chr7:64140444|64140523:+_chr7:64141710|64141756:+_chr7:64149687|64150058:+","UN_GUSBP6_LS0003","GUSBP6","pseudogene","no",2.03,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr7:64102133|64104093","intron_intersect_chr7:64102133|64104093"]
["chr7:64120545|64128637:+","chr7:64120431|64120545:+_chr7:64128637|64130782:+","UN_GUSBP6_LS0010","GUSBP6","pseudogene","no",4.29,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","TE_intersect_:64128566|chr7|64128566|64128958|MLT1B:ERVL-MaLR:LTR|196|+","intron_intersect_chr7:64120545|64140495","intron_intersect_chr7:64120545|64140495"]
["chr7:65110992|65122956:-","chr7:65110519|65110992:-_chr7:65122956|65123186:-","UN_RNU6-1229P_UP_LS0006","RNU6-1229P","small non-coding RNA gene","no",4.73,0,0,0.004,39,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chr7:65303802|65313570:+","chr7:65269380|65269538:+_chr7:65303529|65303802:+_chr7:65313570|65313753:+_chr7:65317447|65317954:+","UN_AC092685.1_UP_LS0003","AC092685.1","pseudogene","no",2.58,0,0,0.013,129,0,0,"0(0)","TGCT","no","TE_intersect_:65303594|chr7|65303594|65305650|PABL_B-int:ERV1:LTR|238|+","TE_intersect_:65313380|chr7|65313380|65313649|MER67C:ERV1:LTR|244|+","NA","NA"]
["chr7:66359377|66359441:-","chr7:66358603|66359377:-_chr7:66359441|66359895:-","UN_TPST1_LS0039","TPST1","protein coding gene","no",2.33,0,0,0.003,30,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr7:66359036|66359473","exon_intersect_chr7:66359036|66359473"]
["chr7:67306083|67309564:+","chr7:67302659|67302885:+_chr7:67305987|67306083:+_chr7:67309564|67309715:+","UN_STAG3L4_LS0012","STAG3L4","pseudogene","no",2.31,0,0,0.002,21,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr7:67306083|67307605","exon_intersect_chr7:67309564|67309715"]
["chr7:68005942|68009654:-","chr7:68000912|68001057:-_chr7:68003065|68003389:-_chr7:68003484|68003541:-_chr7:68005754|68005942:-_chr7:68009654|68012127:-_chr7:68017955|68018058:-_chr7:68019009|68019236:-_chr7:68021320|68022218:-","UN_AC092648.1_UP_LS0016","AC092648.1","pseudogene","no",17.47,0,0,0.003,31,0,0,"0(0)","THYM","no","TE_intersect_:68009471|chr7|68009471|68009801|LTR72B:ERV1:LTR|183|-","NA","NA","NA"]
["chr7:7208536|7211036:-","chr7:7208288|7208536:-_chr7:7211036|7211160:-_chr7:7212161|7212406:-_chr7:7216302|7216454:-","UN_C1GALT1_LS0026","C1GALT1","protein coding gene","no",4.32,0,0,0.002,17,0,0,"0(0)","TGCT","no","TE_intersect_:7210964|chr7|7210964|7212527|HUERS-P3b-int:ERV1:LTR|110|-","TE_intersect_:7208467|chr7|7208467|7209058|L1MB3:L1:LINE|178|-","intron_intersect_chr7:7210567|7234258","intron_intersect_chr7:7182820|7209427"]
["chr7:72278810|72504112:-","chr7:71779492|71787902:-_chr7:71810336|71810492:-_chr7:72023657|72023769:-_chr7:72106151|72106294:-_chr7:72278686|72278810:-_chr7:72504112|72504215:-","UN_RNA5SP232_UP_LS0001","RNA5SP232","no","no",12.16,0.32,0,0.002,15,0.001,1,"0(0)","ACC","no","NA","NA","NA","intron_intersect_chr7:72278810|72336704"]
["chr7:73231928|73234619:+","chr7:73220639|73220720:+_chr7:73223879|73223956:+_chr7:73225711|73225786:+_chr7:73225886|73226051:+_chr7:73227409|73227464:+_chr7:73229567|73229689:+_chr7:73231811|73231928:+_chr7:73234619|73234718:+_chr7:73235189|73235334:+_chr7:73235669|73235945:+","UN_NCF1B_LS0020","NCF1B","pseudogene","no",8.76,0,0,0.002,22,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chr7:73231810|73231929","exon_intersect_chr7:73234591|73234719"]
["chr7:73831396|73831511:+","chr7:73831004|73831396:+_chr7:73831511|73832257:+_chr7:73832298|73832683:+","UN_CLDN4_LS0114","CLDN4","protein coding gene","no",42.6,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr7:73828600|73832693","exon_intersect_chr7:73828600|73832693"]
["chr7:73856133|73860838:+","chr7:73855676|73856133:+_chr7:73860838|73861077:+_chr7:73864993|73865421:+_chr7:73865577|73865890:+","UN_TMEM270_UP_LS0040","TMEM270","protein coding gene","no",2.69,0,0,0.019,180,0,0,"0(0)","ESCA;LUSC;OV","no","NA","TE_intersect_:73860649|chr7|73860649|73860933|AluJr:Alu:SINE|158|-","NA","NA"]
["chr7:74568941|74589851:+","chr7:74568812|74568941:+_chr7:74589851|74589928:+_chr7:74590825|74591017:+_chr7:74595014|74595051:+_chr7:74601044|74601180:+_chr7:74602365|74602583:+","UN_GTF2IRD1_LS0061","GTF2IRD1","protein coding gene","no",5.05,0,0,0.02,188,0,0,"0(0)","ACC;BLCA;KIRC;KIRP;PCPG;SARC","no","TE_intersect_:74568749|chr7|74568749|74569022|L2:L2:LINE|263|-","NA","intron_intersect_chr7:74559660|74589851","exon_intersect_chr7:74589851|74589928"]
["chr7:75296126|75297674:-","chr7:75288120|75288213:-_chr7:75295941|75296126:-_chr7:75297674|75297760:-_chr7:75299654|75299788:-_chr7:75358944|75359043:-","UN_PMS2P10_LS0003","PMS2P10","pseudogene","no",4.55,0,0,0.005,48,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chr7:75297674|75297760","intron_intersect_chr7:75296126|75297395"]
["chr7:75696|82212:-","chr7:70972|71571:-_chr7:75532|75696:-_chr7:82212|82264:-","UN_AC093627.1_LS0007","AC093627.1","lncRNA gene","no",2.91,0,0,0.007,69,0,0,"0(0)","OV","no","NA","TE_intersect_:75517|chr7|75517|76103|L1MC3:L1:LINE|252|+","NA","NA"]
["chr7:75888231|75888301:-","chr7:75888067|75888231:-_chr7:75888301|75888741:-_chr7:76237670|76237780:-","UN_RHBDD2_LS0108","RHBDD2","protein coding gene","no",5.73,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr7:75887992|75888926","exon_intersect_chr7:75887992|75888926"]
["chr7:76505237|76505374:+","chr7:76505072|76505237:+_chr7:76505374|76505643:+","UN_DTX2_LS0036","DTX2","protein coding gene","no",3.9,0,0,0.002,23,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chr7:76504445|76505374","exon_intersect_chr7:76505374|76505995"]
["chr7:76830929|76832249:+","chr7:76830481|76830929:+_chr7:76832249|76835976:+","UN_AC006972.1_LS0004","AC006972.1","lncRNA gene","no",3.86,0,0,0.021,197,0,0,"0(0)","ESCA;HNSC;LUSC","no","NA","TE_intersect_:76831934|chr7|76831934|76832367|BLACKJACK:hAT-Blackjack:DNA|305|+","NA","NA"]
["chr7:77509469|77509998:+","chr7:77508563|77509469:+_chr7:77509998|77510591:+","UN_PTPN12_UP_LS0002","PTPN12","protein coding gene","yes",1.32,0,0,0.004,39,0,0,"0(0)","ESCA","no","TE_intersect_:77509293|chr7|77509293|77510598|SVA_F:SVA:Retroposon|75|+","TE_intersect_:77509293|chr7|77509293|77510598|SVA_F:SVA:Retroposon|75|+","NA","NA"]
["chr7:81625226|81690265:-","chr7:81576387|81579733:-_chr7:81581722|81581904:-_chr7:81583120|81583270:-_chr7:81584295|81584440:-_chr7:81594525|81594656:-_chr7:81597656|81597826:-_chr7:81607476|81607643:-_chr7:81625152|81625226:-_chr7:81690265|81690606:-","AC008163.1_LS028","AC008163.1","pseudogene","no",1.57,0,0,0.004,38,0,0,"0(0)","MESO","yes","NA","NA","NA","intron_intersect_chr7:81625226|81626114"]
["chr7:83460266|83464795:+","chr7:83459667|83460266:+_chr7:83464795|83465343:+","UN_SEMA3E_LS0017","SEMA3E","protein coding gene","no",15.99,0,0,0.002,22,0,0,"0(0)","TGCT","no","TE_intersect_:83460120|chr7|83460120|83463207|HERVH-int:ERV1:LTR|101|+","TE_intersect_:83464561|chr7|83464561|83464936|HERVH-int:ERV1:LTR|75|+","intron_intersect_chr7:83425002|83466482","intron_intersect_chr7:83425002|83466482"]
["chr7:85191788|85249853:-","chr7:84995553|84999865:-_chr7:85006802|85006941:-_chr7:85012782|85012846:-_chr7:85015059|85015216:-_chr7:85018252|85018293:-_chr7:85020233|85020321:-_chr7:85022391|85022613:-_chr7:85036889|85037033:-_chr7:85040673|85040742:-_chr7:85042171|85042285:-_chr7:85055717|85055859:-_chr7:85065424|85065552:-_chr7:85068191|85068284:-_chr7:85072962|85073081:-_chr7:85081517|85081579:-_chr7:85097805|85097965:-_chr7:85121741|85121931:-_chr7:85153608|85153739:-_chr7:85191647|85191788:-_chr7:85249853|85249969:-_chr7:85250115|85250340:-","UN_SEMA3D_UP_LS0003","SEMA3D","protein coding gene","no",2.03,0,0,0.013,128,0,0,"0(0)","ESCA;LUSC;THYM","no","NA","NA","NA","NA"]
["chr7:893212|893248:+","chr7:892300|893212:+_chr7:893248|893282:+_chr7:893615|893815:+_chr7:893899|893971:+_chr7:895334|896434:+","UN_GET4_LS0060","GET4","protein coding gene","no",34.83,0,0,0.002,21,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr7:892474|893740","intron_intersect_chr7:892474|893740"]
["chr7:91581984|91597064:+","chr7:91258460|91267706:+_chr7:91287750|91287970:+_chr7:91312440|91312562:+_chr7:91315973|91316030:+_chr7:91466845|91466878:+_chr7:91496503|91496601:+_chr7:91581948|91581984:+_chr7:91597064|91598250:+","UN_AKAP9_UP_LS0010","AKAP9","protein coding gene","yes",2.72,0,0,0.014,130,0,0,"0(0)","KIRC","no","TE_intersect_:91581631|chr7|91581631|91582122|MLT2B1:ERVL:LTR|195|-","NA","NA","NA"]
["chr7:93149059|93239866:+","chr7:93148861|93149059:+_chr7:93239866|93239934:+_chr7:93252653|93252775:+_chr7:93253860|93253931:+_chr7:93256509|93256562:+_chr7:93257394|93257464:+_chr7:93258159|93258276:+_chr7:93258357|93258392:+_chr7:93259550|93259632:+_chr7:93271220|93271262:+_chr7:93272635|93272733:+_chr7:93276165|93276305:+_chr7:93291703|93291835:+_chr7:93294545|93294636:+_chr7:93296742|93296836:+_chr7:93297145|93297243:+_chr7:93303460|93303550:+_chr7:93305828|93306004:+_chr7:93308824|93308942:+_chr7:93311166|93311272:+_chr7:93323611|93323732:+_chr7:93334117|93334197:+_chr7:93341427|93341575:+_chr7:93348711|93348798:+","UN_GNGT1_UP_LS0002","GNGT1","protein coding gene","no",5.14,0,0,0.001,13,0,0,"0(0)","PCPG","no","TE_intersect_:93148970|chr7|93148970|93149490|MER41C:ERV1:LTR|83|+","NA","NA","exon_intersect_chr7:93239866|93239950"]
["chr7:94236728|94249624:-","chr7:94088238|94088365:-_chr7:94090743|94090870:-_chr7:94129886|94129976:-_chr7:94234150|94234226:-_chr7:94236645|94236728:-_chr7:94249624|94249723:-","UN_AC003092.2_UP_LS0015","AC003092.2","lncRNA gene","no",7.02,0,0,0.004,43,0,0,"0(0)","PCPG","no","TE_intersect_:94249542|chr7|94249542|94249918|THE1D:ERVL-MaLR:LTR|130|-","NA","NA","NA"]
["chr7:94427272|94427658:-","chr7:94426145|94426515:-_chr7:94427191|94427272:-_chr7:94427658|94427947:-","UN_COL1A2_LS0203","COL1A2","protein coding gene","no",16.51,0,0,0.009,86,0,0,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chr7:94427188|94427885","exon_intersect_chr7:94427188|94427885"]
["chr7:97006714|97007638:+","chr7:97006566|97006714:+_chr7:97007638|97007831:+_chr7:97009796|97011039:+","UN_DLX6_LS0001","DLX6","protein coding gene","no",2.15,0,0,0.025,241,0,0,"0(0)","CESC;ESCA;LUSC;OV;STAD","no","NA","NA","exon_intersect_chr7:97006493|97007831","exon_intersect_chr7:97006493|97007831"]
["chr7:988418|988961:+","chr7:986657|986797:+_chr7:987107|987245:+_chr7:987347|987531:+_chr7:988277|988418:+_chr7:988961|989640:+","CYP2W1_LS015","CYP2W1","protein coding gene","no",4.63,0,0,0.007,67,0,0,"0(0)","ACC;ESCA;READ","yes","NA","NA","exon_intersect_chr7:988277|989640","exon_intersect_chr7:988277|989640"]
["chr7:99479856|99480563:-","chr7:99458188|99458355:-_chr7:99459147|99459263:-_chr7:99460086|99460193:-_chr7:99466129|99466300:-_chr7:99470201|99470324:-_chr7:99479640|99479856:-_chr7:99480563|99480601:-","UN_ZNF789_LS0017","ZNF789","protein coding gene","no",2.08,0,0,0.004,37,0,0,"0(0)","ESCA;LAML","no","NA","TE_intersect_:99479837|chr7|99479837|99480043|MER46C:TcMar-Tigger:DNA|257|+","exon_intersect_chr7:99478274|99482326","exon_intersect_chr7:99478274|99482326"]
["chr7:99829557|99830258:-","chr7:99828187|99829557:-_chr7:99830258|99830515:-_chr7:99831490|99831767:-","UN_CYP3A43_LS0002","CYP3A43","protein coding gene","no",3.35,0,0,0.002,22,0,0,"0(0)","ACC","no","TE_intersect_:99830235|chr7|99830235|99830540|AluSq2:Alu:SINE|121|+","NA","intron_intersect_chr7:99828186|99836453","intron_intersect_chr7:99828186|99836453"]
["chr8:100709703|100712362:-","chr8:100709136|100709223:-_chr8:100709459|100709703:-_chr8:100712362|100712457:-_chr8:100712652|100712761:-","UN_PABPC1_LS0092","PABPC1","protein coding gene","no",157.62,0,0,0.005,51,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr8:100712362|100712457","exon_intersect_chr8:100709459|100709847"]
["chr8:101909354|101911383:+","chr8:101891503|101891597:+_chr8:101898550|101898612:+_chr8:101906238|101906396:+_chr8:101909275|101909354:+_chr8:101911383|101911609:+","UN_NCALD_LS0036","NCALD","protein coding gene","no",2.12,0,0,0.011,102,0,0,"0(0)","ESCA;STAD","no","NA","TE_intersect_:101911347|chr8|101911347|101911656|AluSz:Alu:SINE|126|-","intron_intersect_chr8:101887227|101915512","intron_intersect_chr8:101887227|101915512"]
["chr8:102941601|102953612:-","chr8:102941261|102941601:-_chr8:102953612|102953726:-_chr8:102976105|102976133:-","UN_AZIN1-AS1_LS0055","AZIN1-AS1","lncRNA gene","no",2.23,0,0,0.004,37,0,0,"0(0)","KIRP","no","TE_intersect_:102953295|chr8|102953295|102953804|L1MC3:L1:LINE|157|+","TE_intersect_:102941212|chr8|102941212|102941637|LTR16A2:ERVL:LTR|234|-","intron_intersect_chr8:102950564|102960813","intron_intersect_chr8:102937757|102941623"]
["chr8:104429701|104438065:-","chr8:104379491|104379843:-_chr8:104381184|104381314:-_chr8:104392784|104392991:-_chr8:104424247|104424389:-_chr8:104427980|104428121:-_chr8:104429545|104429701:-_chr8:104438065|104438183:-","UN_DPYS_LS0036","DPYS","protein coding gene","no",2.53,0,0,0.004,37,0,0,"0(0)","ACC","no","TE_intersect_:104437821|chr8|104437821|104438157|HAL1:L1:LINE|305|+","NA","intron_intersect_chr8:104435546|104444248","intron_intersect_chr8:104429701|104435453"]
["chr8:107238001|107240603:-","chr8:107233511|107234436:-_chr8:107237903|107238001:-_chr8:107240603|107241052:-","UN_HMGB1P46_UP_LS0006","HMGB1P46","pseudogene","no",5.29,0,0,0.109,1047,0,0,"0(0)","THYM","no","NA","TE_intersect_:107237729|chr8|107237729|107238028|AluSc:Alu:SINE|120|+","NA","NA"]
["chr8:108321810|108331280:+","chr8:108321610|108321810:+_chr8:108331280|108331755:+","UN_EIF3E_LS0028","EIF3E","protein coding gene","yes",2.09,0,0,0.003,33,0,0,"0(0)","TGCT","no","TE_intersect_:108321613|chr8|108321613|108321847|L1MCa:L1:LINE|210|+","NA","intron_intersect_chr8:108309463|108355331","intron_intersect_chr8:108309463|108355331"]
["chr8:114284533|114295466:+","chr8:114282072|114282294:+_chr8:114284219|114284533:+_chr8:114295466|114295624:+","AC064802.1_LS005","AC064802.1","lncRNA gene","no",7.03,0,0.59,0.009,84,0,0,"0.001(9)","TGCT","yes","TE_intersect_:114282148|chr8|114282148|114285388|HERVH-int:ERV1:LTR|102|+","NA","intron_intersect_chr8:114284533|114287722","exon_intersect_chr8:114295466|114295839"]
["chr8:11463086|11469550:+","chr8:11462049|11463086:+_chr8:11469550|11470004:+","UN_FAM167A_LS0020","FAM167A","protein coding gene","no",2.36,0,0,0.003,29,0,0,"0(0)","THCA","no","TE_intersect_:11462998|chr8|11462998|11463166|LTR82A:ERVL:LTR|232|+","NA","intron_intersect_chr8:11446621|11466626","intron_intersect_chr8:11467594|11474609"]
["chr8:11643519|11647337:+","chr8:11642778|11643519:+_chr8:11647337|11649348:+","UN_GATA4_UP_LS0008","GATA4","protein coding gene","yes",4.25,0,0,0.016,155,0,0,"0(0)","SKCM","no","TE_intersect_:11643373|chr8|11643373|11643664|L1MC4a:L1:LINE|244|+","NA","NA","NA"]
["chr8:11757083|11758129:+","chr8:11708811|11708928:+_chr8:11748916|11749085:+_chr8:11750111|11750236:+_chr8:11755046|11755133:+_chr8:11756935|11757083:+_chr8:11758129|11760015:+","UN_GATA4_LS0026","GATA4","protein coding gene","yes",6.69,0,0,0.006,62,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr8:11757083|11758293","intron_intersect_chr8:11757083|11758293"]
["chr8:11844743|11844827:+","chr8:11844573|11844743:+_chr8:11844827|11845044:+","UN_CTSB_LS0122","CTSB","protein coding gene","no",44.75,0,0,0.007,65,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr8:11842524|11845222","exon_intersect_chr8:11842524|11845222"]
["chr8:119917623|119928400:+","chr8:119917488|119917623:+_chr8:119928400|119928578:+_chr8:119929815|119930190:+","UN_DEPTOR_LS0016","DEPTOR","protein coding gene","no",3.96,0,0,0.002,21,0,0,"0(0)","TGCT","no","TE_intersect_:119917331|chr8|119917331|119918257|LTR5_Hs:ERVK:LTR|76|+","NA","intron_intersect_chr8:119891229|119928400","exon_intersect_chr8:119928400|119928578"]
["chr8:120004306|120006805:+","chr8:119873717|119873968:+_chr8:119928400|119928578:+_chr8:119929815|119929938:+_chr8:119965232|119965410:+_chr8:120001525|120001710:+_chr8:120002977|120003111:+_chr8:120004280|120004306:+_chr8:120006805|120006875:+_chr8:120009029|120009133:+_chr8:120049576|120056184:+","UN_DEPTOR_LS0038","DEPTOR","protein coding gene","no",2.36,0,0,0.005,52,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr8:120003111|120006805","exon_intersect_chr8:120006805|120006875"]
["chr8:121667980|121707544:+","chr8:121667592|121667980:+_chr8:121707544|121707675:+_chr8:121717758|121717856:+","UN_HAS2-AS1_LS0005","HAS2-AS1","lncRNA gene","no",3.26,0,0,0.002,22,0,0,"0(0)","TGCT","no","TE_intersect_:121667976|chr8|121667976|121668018|THE1B:ERVL-MaLR:LTR|163|+","NA","NA","exon_intersect_chr8:121707544|121707631"]
["chr8:123349444|123354991:-","chr8:123319864|123321175:-_chr8:123322938|123323066:-_chr8:123325893|123326026:-_chr8:123328190|123328579:-_chr8:123333878|123334021:-_chr8:123334200|123334322:-_chr8:123336373|123336532:-_chr8:123337625|123337821:-_chr8:123339311|123339446:-_chr8:123344884|123345069:-_chr8:123346086|123346272:-_chr8:123346618|123346750:-_chr8:123347092|123348273:-_chr8:123349285|123349444:-_chr8:123354991|123355032:-_chr8:123356389|123356477:-_chr8:123357562|123357736:-_chr8:123359221|123359336:-_chr8:123359577|123359685:-_chr8:123361539|123361646:-_chr8:123369058|123369175:-_chr8:123369821|123370024:-_chr8:123370903|123370990:-_chr8:123371236|123371338:-_chr8:123371670|123371835:-_chr8:123372637|123372686:-_chr8:123380529|123380677:-_chr8:123396187|123396401:-","UN_ATAD2_LS0015","ATAD2","protein coding gene","no",5.06,0.2,0,0.002,15,0.003,2,"0(0)","LAML","no","NA","NA","intron_intersect_chr8:123352643|123356100","intron_intersect_chr8:123349444|123352181"]
["chr8:124826446|124830104:-","chr8:124822549|124826446:-_chr8:124830104|124830230:-_chr8:124832275|124835143:-_chr8:124840124|124840258:-_chr8:124857363|124857516:-","UN_AC100858.3_LS0002","AC100858.3","lncRNA gene","no",1.67,0,0,0.005,52,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr8:12605475|12607291:-","chr8:12504949|12509800:-_chr8:12511122|12511257:-_chr8:12518772|12518955:-_chr8:12525625|12525732:-_chr8:12526633|12536919:-_chr8:12580828|12581044:-_chr8:12601158|12601398:-_chr8:12601787|12601854:-_chr8:12604931|12605107:-_chr8:12605392|12605475:-_chr8:12607291|12607531:-_chr8:12607923|12607990:-_chr8:12659130|12659829:-_chr8:12665278|12665629:-","UN_AC068587.4_LS0146","AC068587.4","lncRNA gene","no",2.87,0,0,0.009,90,0,0,"0(0)","GBM;LGG","no","NA","NA","NA","NA"]
["chr8:127149672|127161922:-","chr8:127147623|127148914:-_chr8:127149616|127149672:-_chr8:127161922|127162084:-_chr8:127164438|127169117:-_chr8:127187785|127187884:-_chr8:127188045|127188115:-_chr8:127197475|127197564:-_chr8:127202042|127202152:-_chr8:127203163|127209717:-_chr8:127218810|127219088:-","CASC19_LS007","CASC19","lncRNA gene","no",1.66,0,0,0.003,31,0,0,"0(0)","ESCA","yes","NA","TE_intersect_:127149453|chr8|127149453|127149723|LOR1-int:ERV1:LTR|134|-","NA","NA"]
["chr8:127631477|127679214:-","chr8:127631378|127631477:-_chr8:127679214|127679386:-","UN_CASC8_UP_LS0028","CASC8","lncRNA gene","no",3.44,0,0,0.006,53,0,0,"0(0)","LUSC","no","NA","TE_intersect_:127631223|chr8|127631223|127631511|AluSp:Alu:SINE|118|+","NA","NA"]
["chr8:128020719|128031959:+","chr8:128009658|128009718:+_chr8:128010318|128010444:+_chr8:128020339|128020719:+_chr8:128031959|128032320:+_chr8:128070160|128070361:+_chr8:128096518|128096654:+","UN_PVT1_LS0144","PVT1","lncRNA gene","yes",3,0,0,0.01,97,0,0,"0(0)","CHOL;STAD;UCS","no","TE_intersect_:128020178|chr8|128020178|128020791|MLT1E2:ERVL-MaLR:LTR|208|+","NA","intron_intersect_chr8:128010611|128048448","intron_intersect_chr8:128010611|128048448"]
["chr8:128155419|128186556:+","chr8:128153043|128153272:+_chr8:128155167|128155419:+_chr8:128186556|128188238:+","UN_RN7SKP226_UP_LS0010","RN7SKP226","small non-coding RNA gene","no",3.23,0,0,0.003,26,0,0,"0(0)","UVM","no","NA","NA","NA","NA"]
["chr8:128615257|128737982:+","chr8:128614149|128615257:+_chr8:128737982|128738274:+_chr8:128777155|128777443:+","UN_AC103833.1_UP_LS0023","AC103833.1","pseudogene","no",5.54,0,0,0.005,44,0,0,"0(0)","LUAD;MESO","no","TE_intersect_:128614231|chr8|128614231|128617177|HERVH-int:ERV1:LTR|101|-","NA","NA","NA"]
["chr8:12932128|12932383:-","chr8:12908258|12908972:-_chr8:12932039|12932128:-_chr8:12932383|12932531:-","UN_AC123777.1_UP_LS0008","AC123777.1","lncRNA gene","no",2.08,0,0,0.002,19,0,0,"0(0)","TGCT","no","TE_intersect_:12932360|chr8|12932360|12932666|AluY:Alu:SINE|78|+","NA","NA","NA"]
["chr8:129418827|129438136:+","chr8:129415949|129416027:+_chr8:129418748|129418827:+_chr8:129438136|129438268:+_chr8:129439974|129440028:+_chr8:129446534|129446626:+_chr8:129452747|129452949:+","UN_AC011257.1_LS0009","AC011257.1","lncRNA gene","no",3.12,0,0,0.001,12,0,0,"0(0)","THYM","no","NA","TE_intersect_:129438084|chr8|129438084|129438522|Tigger2a:TcMar-Tigger:DNA|141|+","intron_intersect_chr8:129416027|129439974","intron_intersect_chr8:129416027|129439974"]
["chr8:132825371|132825615:+","chr8:132775511|132775645:+_chr8:132777796|132777911:+_chr8:132794410|132794581:+_chr8:132794733|132794817:+_chr8:132798772|132798860:+_chr8:132803819|132804032:+_chr8:132804615|132804740:+_chr8:132811046|132811128:+_chr8:132814637|132814889:+_chr8:132816888|132817076:+_chr8:132817339|132817545:+_chr8:132824004|132824060:+_chr8:132825264|132825371:+_chr8:132825615|132825977:+","UN_PHF20L1_LS0016","PHF20L1","protein coding gene","no",6.62,0,0,0.002,20,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr8:132825371|132826179","intron_intersect_chr8:132825371|132826179"]
["chr8:133664975|133683215:-","chr8:133663758|133663933:-_chr8:133664044|133664975:-_chr8:133683215|133683295:-_chr8:133683969|133684123:-","UN_RF00561_UP_LS0070","RF00561","small non-coding RNA gene","no",3.83,0,0,0.003,27,0,0,"0(0)","ACC","no","TE_intersect_:133682822|chr8|133682822|133683438|L1MEf:L1:LINE|290|+","NA","NA","NA"]
["chr8:13585926|13604537:-","chr8:13579698|13581916:-_chr8:13582956|13585926:-_chr8:13604537|13604616:-","UN_DLC1_LS0034","DLC1","protein coding gene","yes",1.96,0,0,0.003,24,0,0,"0(0)","UVM","no","NA","TE_intersect_:13585512|chr8|13585512|13585934|MLT1C:ERVL-MaLR:LTR|223|-","exon_intersect_chr8:13604537|13604610","intron_intersect_chr8:13584533|13604537"]
["chr8:138066640|138072901:+","chr8:138062858|138063523:+_chr8:138066543|138066640:+_chr8:138072901|138073240:+","UN_AC079015.1_LS0002","AC079015.1","lncRNA gene","no",1.46,0,0,0.001,11,0,0,"0(0)","GBM","no","TE_intersect_:138066506|chr8|138066506|138066794|AluSc:Alu:SINE|115|-","TE_intersect_:138072208|chr8|138072208|138073215|L1PA16:L1:LINE|132|+","intron_intersect_chr8:138063523|138072901","exon_intersect_chr8:138072901|138073240"]
["chr8:140350656|140352327:+","chr8:140349488|140350368:+_chr8:140350530|140350656:+_chr8:140352327|140353348:+","UN_TRAPPC9_LS0146","TRAPPC9","protein coding gene","no",3.24,0,0,0.002,23,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr8:140311374|140360050","intron_intersect_chr8:140311374|140360050"]
["chr8:141061592|141064053:+","chr8:141058253|141058508:+_chr8:141058921|141058979:+_chr8:141059978|141061592:+_chr8:141064053|141065112:+","UN_DENND3_UP_LS0003","DENND3","protein coding gene","no",2.57,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:141061425|chr8|141061425|141061857|L2b:L2:LINE|381|-","TE_intersect_:141063853|chr8|141063853|141064167|AluSx1:Alu:SINE|127|-","NA","NA"]
["chr8:142389749|142390137:-","chr8:142270475|142271691:-_chr8:142274781|142274863:-_chr8:142284413|142284485:-_chr8:142300486|142300644:-_chr8:142314384|142314440:-_chr8:142315003|142315092:-_chr8:142318544|142318634:-_chr8:142330901|142330970:-_chr8:142331754|142331831:-_chr8:142343966|142344472:-_chr8:142345743|142345892:-_chr8:142354637|142354763:-_chr8:142389689|142389749:-_chr8:142390137|142390558:-","UN_TSNARE1_LS0142","TSNARE1","protein coding gene","no",1.86,0,0,0.004,37,0,0,"0(0)","ESCA","no","TE_intersect_:142389822|chr8|142389822|142390259|Tigger3b:TcMar-Tigger:DNA|186|-","TE_intersect_:142389399|chr8|142389399|142389820|L1ME4b:L1:LINE|285|+","intron_intersect_chr8:142366017|142402790","intron_intersect_chr8:142366017|142402790"]
["chr8:142660482|142663126:-","chr8:142658364|142660482:-_chr8:142663126|142666520:-_chr8:142669932|142669970:-","UN_JRK_LS0007","JRK","protein coding gene","no",1.68,0,0,0.004,36,0,0,"0(0)","ESCA","no","TE_intersect_:142662877|chr8|142662877|142663164|AluJr:Alu:SINE|136|+","TE_intersect_:142660400|chr8|142660400|142660699|AluJr:Alu:SINE|161|-","exon_intersect_chr8:142657460|142666520","exon_intersect_chr8:142657460|142666520"]
["chr8:143020910|143022004:-","chr8:143020889|143020910:-_chr8:143022004|143022276:-_chr8:143022348|143022512:-","UN_LY6E_LS0012","LY6E","protein coding gene","no",2.16,0,0,0.004,36,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr8:143021314|143022412","exon_intersect_chr8:143020883|143020991"]
["chr8:143022222|143022277:-","chr8:143021548|143021591:-_chr8:143021840|143022083:-_chr8:143022106|143022222:-_chr8:143022277|143022410:-_chr8:143217754|143217776:-","UN_LY6E_LS0205","LY6E","protein coding gene","no",27.3,0.29,0,0.004,38,0.001,1,"0(0)","OV","no","NA","NA","exon_intersect_chr8:143021314|143022412","exon_intersect_chr8:143021314|143022412"]
["chr8:143255122|143269360:+","chr8:143255068|143255122:+_chr8:143269360|143269520:+_chr8:143274704|143274802:+_chr8:143275897|143276928:+","UN_AC138696.1_LS0036","AC138696.1","protein coding gene","no",1.57,0,0,0.005,47,0,0,"0(0)","STAD","no","NA","NA","intron_intersect_chr8:143253591|143259775","exon_intersect_chr8:143269358|143269520"]
["chr8:143569952|143570243:-","chr8:143566192|143567465:-_chr8:143567611|143567676:-_chr8:143567786|143567888:-_chr8:143568142|143568261:-_chr8:143568470|143568719:-_chr8:143569441|143569614:-_chr8:143569697|143569840:-_chr8:143569951|143569952:-_chr8:143570243|143570380:-_chr8:143570473|143570657:-_chr8:143570877|143570994:-_chr8:143571667|143571821:-_chr8:143572033|143572185:-_chr8:143572421|143573605:-_chr8:143574087|143574900:-_chr8:143574986|143575093:-_chr8:143575191|143575345:-_chr8:143575423|143575525:-_chr8:143575622|143575702:-_chr8:143576078|143576162:-_chr8:143576432|143576572:-_chr8:143576646|143576842:-_chr8:143577062|143577177:-_chr8:143577269|143577399:-_chr8:143577657|143577739:-_chr8:143577816|143577943:-_chr8:143578093|143579830:-_chr8:143580012|143580206:-_chr8:143580506|143580727:-_chr8:143581054|143581154:-_chr8:143581229|143581328:-_chr8:143586219|143586290:-_chr8:143586729|143586852:-_chr8:143588991|143590081:-_chr8:143590608|143597447:-","UN_MROH6_LS0039","MROH6","protein coding gene","no",6.6,0,0,0.009,86,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chr8:143570243|143570417","exon_intersect_chr8:143569951|143570065"]
["chr8:143725499|143725609:+","chr8:143725183|143725220:+_chr8:143725359|143725499:+_chr8:143725609|143725781:+","UN_FAM83H_LS0124","FAM83H","protein coding gene","no",5.44,0,0,0.003,29,0,0,"0(0)","ESCA","no","TE_intersect_:143725326|chr8|143725326|143725569|AluSz:Alu:SINE|107|+","NA","exon_intersect_chr8:143723933|143728723","exon_intersect_chr8:143723933|143728723"]
["chr8:143839920|143915192:+","chr8:143839908|143839920:+_chr8:143915192|143915313:+_chr8:143915355|143915725:+_chr8:143915939|143916170:+_chr8:143921637|143921793:+","UN_GRINA_UP_LS0009","GRINA","protein coding gene","no",0.25,0,0,0.004,36,0,0,"0(0)","ESCA;OV","no","NA","NA","exon_intersect_chr8:143839509|143840030","exon_intersect_chr8:143915147|143922395"]
["chr8:143993118|143993227:-","chr8:143992827|143993118:-_chr8:143993227|143993345:-","UN_PARP10_LS0292","PARP10","protein coding gene","no",2.08,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr8:143992692|143993415","exon_intersect_chr8:143992692|143993415"]
["chr8:144255640|144255848:-","chr8:144254899|144255179:-_chr8:144255514|144255640:-_chr8:144255848|144258774:-","UN_MROH1_LS0120","MROH1","protein coding gene","no",3.46,0,0,0.008,76,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chr8:144255705|144258777","exon_intersect_chr8:144255509|144255705"]
["chr8:144440906|144442037:-","chr8:144428633|144429336:-_chr8:144430404|144430537:-_chr8:144431078|144431151:-_chr8:144432285|144432460:-_chr8:144433009|144433759:-_chr8:144433978|144434279:-_chr8:144434811|144434889:-_chr8:144435017|144435170:-_chr8:144435474|144435550:-_chr8:144435658|144436418:-_chr8:144436558|144436681:-_chr8:144436757|144436920:-_chr8:144437027|144437099:-_chr8:144438471|144438560:-_chr8:144438653|144438735:-_chr8:144440021|144440210:-_chr8:144440351|144440476:-_chr8:144440718|144440906:-_chr8:144442037|144443321:-_chr8:144443728|144444024:-_chr8:144444180|144444275:-_chr8:144444390|144444457:-","TONSL_LS025","TONSL","protein coding gene","no",2.42,0,0,0.005,50,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chr8:144440718|144442856","exon_intersect_chr8:144440718|144442856"]
["chr8:144643005|144646669:-","chr8:144642820|144643005:-_chr8:144646669|144646953:-","UN_ARHGAP39_UP_LS0014","ARHGAP39","protein coding gene","no",6.28,0,0,0.001,13,0,0,"0(0)","UCS","no","NA","TE_intersect_:144642867|chr8|144642867|144643044|AluJo:Alu:SINE|163|+","NA","NA"]
["chr8:15417305|15623080:+","chr8:15417215|15417305:+_chr8:15623080|15623249:+_chr8:15650697|15650814:+_chr8:15659507|15659647:+_chr8:15662156|15662296:+_chr8:15673747|15673836:+_chr8:15730666|15730729:+_chr8:15743538|15743612:+_chr8:15748375|15748465:+_chr8:15764203|15764459:+","TUSC3_LS004","TUSC3","protein coding gene","no",9.39,0,0,0.025,241,0,0,"0(0)","CHOL;KIRC;KIRP;LUAD;LUSC","yes","TE_intersect_:15417004|chr8|15417004|15417387|MSTA:ERVL-MaLR:LTR|150|+","NA","intron_intersect_chr8:15417305|15483386","exon_intersect_chr8:15623078|15623249"]
["chr8:16749746|16751504:+","chr8:16749674|16749746:+_chr8:16751504|16751589:+_chr8:16753171|16753275:+","UN_AC011586.2_LS0020","AC011586.2","lncRNA gene","no",9.42,0,0,0.006,57,0,0,"0(0)","SKCM","no","TE_intersect_:16749475|chr8|16749475|16749828|THE1B:ERVL-MaLR:LTR|120|+","NA","intron_intersect_chr8:16690962|16783188","intron_intersect_chr8:16690962|16783188"]
["chr8:1796468|1799838:+","chr8:1796279|1796468:+_chr8:1799838|1800025:+_chr8:1800674|1804898:+","UN_KBTBD11-OT1_LS0052","KBTBD11-OT1","lncRNA gene","no",4.04,0,0,0.006,53,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr8:19095669|19142586:+","chr8:19094325|19094567:+_chr8:19095447|19095669:+_chr8:19142586|19142729:+_chr8:19144492|19145471:+","UN_AC100849.1_LS0002","AC100849.1","lncRNA gene","no",3.24,0,0,0.002,16,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chr8:19095669|19114885","intron_intersect_chr8:19115024|19183674"]
["chr8:21991974|21992832:+","chr8:21965956|21966313:+_chr8:21966857|21967003:+_chr8:21969483|21969576:+_chr8:21970144|21970310:+_chr8:21971876|21971941:+_chr8:21974670|21974774:+_chr8:21976356|21976521:+_chr8:21977770|21977843:+_chr8:21980084|21980203:+_chr8:21981731|21981877:+_chr8:21982640|21982812:+_chr8:21984646|21984839:+_chr8:21985586|21985691:+_chr8:21987141|21987276:+_chr8:21987784|21987857:+_chr8:21989003|21989083:+_chr8:21990344|21990407:+_chr8:21990811|21990919:+_chr8:21991868|21991974:+_chr8:21992832|21994451:+_chr8:21995492|21995599:+_chr8:21998755|21998837:+_chr8:21999091|21999305:+_chr8:21999536|21999674:+_chr8:22002112|22002272:+_chr8:22003219|22003317:+_chr8:22003903|22004013:+","UN_XPO7_LS0033","XPO7","protein coding gene","no",6.35,0,0,0.003,27,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chr8:21991974|21994363","intron_intersect_chr8:21991974|21994363"]
["chr8:22691986|22692302:-","chr8:22687659|22691482:-_chr8:22691743|22691986:-_chr8:22692302|22692354:-_chr8:22692791|22693178:-","UN_EGR3_LS0004","EGR3","protein coding gene","no",1.64,0,0,0.006,57,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chr8:22692302|22692414","intron_intersect_chr8:22691482|22692038"]
["chr8:23294675|23294769:+","chr8:23294537|23294675:+_chr8:23294769|23294864:+_chr8:23295967|23296121:+","UN_R3HCC1_LS0009","R3HCC1","protein coding gene","no",19.51,0,0,0.003,24,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chr8:23293373|23294769","exon_intersect_chr8:23294769|23294864"]
["chr8:24920655|24920784:-","chr8:24919894|24920655:-_chr8:24920784|24920935:-_chr8:24924590|24924711:-","UN_AF106564.1_UP_LS0001","AF106564.1","lncRNA gene","no",3.05,0,0,0.004,36,0,0,"0(0)","PCPG","no","NA","TE_intersect_:24920631|chr8|24920631|24920684|MLT1K:ERVL-MaLR:LTR|208|-","NA","NA"]
["chr8:24920935|24924590:-","chr8:24893373|24893384:-_chr8:24920784|24920935:-_chr8:24924590|24924710:-_chr8:24941819|24941970:-","UN_AF106564.1_UP_LS0002","AF106564.1","lncRNA gene","no",2.94,0,0,0.004,43,0,0,"0(0)","PCPG","no","TE_intersect_:24924451|chr8|24924451|24924729|AluJb:Alu:SINE|162|+","NA","NA","NA"]
["chr8:28414618|28414886:-","chr8:28412169|28414618:-_chr8:28414886|28416366:-","UN_FBXO16_LS0071","FBXO16","protein coding gene","no",2.19,0,0,0.007,65,0,0,"0(0)","KIRC","no","TE_intersect_:28414875|chr8|28414875|28414954|MIRc:MIR:SINE|304|+","TE_intersect_:28414567|chr8|28414567|28414649|L1MC4:L1:LINE|205|+","intron_intersect_chr8:28402701|28415524","intron_intersect_chr8:28402701|28415524"]
["chr8:29564340|29583756:+","chr8:29561478|29561573:+_chr8:29564021|29564340:+_chr8:29583756|29583774:+","UN_AC084026.3_UP_LS0004","AC084026.3","lncRNA gene","no",4.01,0,0,0.003,25,0,0,"0(0)","BRCA","no","NA","NA","exon_intersect_chr8:29564021|29564341","NA"]
["chr8:29791881|29796567:+","chr8:29748350|29748579:+_chr8:29788789|29790447:+_chr8:29791095|29791881:+_chr8:29796567|29798490:+","UN_LINC02099_LS0019","LINC02099","lncRNA gene","no",5.3,0,0,0.018,170,0,0,"0(0)","SKCM;UVM","no","NA","NA","intron_intersect_chr8:29791881|29796835","intron_intersect_chr8:29791881|29796835"]
["chr8:30555076|30574835:-","chr8:30507137|30507236:-_chr8:30554948|30555076:-_chr8:30574835|30574998:-_chr8:30576295|30576464:-_chr8:30578366|30579037:-_chr8:30580281|30580396:-_chr8:30607057|30607150:-_chr8:30612299|30612481:-_chr8:30614608|30614715:-_chr8:30635032|30635123:-_chr8:30653433|30653602:-_chr8:30657973|30658227:-","UN_RBPMS-AS1_UP_LS0001","RBPMS-AS1","lncRNA gene","no",0.97,0,0,0.002,22,0,0,"0(0)","LAML","no","NA","NA","NA","intron_intersect_chr8:30553766|30556453"]
["chr8:34502644|34506723:-","chr8:34498306|34498722:-_chr8:34502539|34502644:-_chr8:34506723|34506914:-_chr8:34507843|34507962:-_chr8:34634095|34634194:-","UN_RPL10AP3_UP_LS0002","RPL10AP3","pseudogene","no",5.24,0,0,0.002,15,0,0,"0(0)","PCPG","no","TE_intersect_:34505919|chr8|34505919|34507486|L2a:L2:LINE|298|+","NA","NA","NA"]
["chr8:37327935|37328708:-","chr8:37326575|37327935:-_chr8:37328708|37328832:-_chr8:37329404|37331166:-_chr8:37331767|37331984:-","UN_AC091182.1_LS0004","AC091182.1","lncRNA gene","no",4.38,0.07,0,0.01,93,0.001,1,"0(0)","SARC","no","NA","NA","exon_intersect_chr8:37326575|37328832","exon_intersect_chr8:37326575|37328832"]
["chr8:37531401|37552508:-","chr8:37516410|37516700:-_chr8:37516803|37516956:-_chr8:37521308|37521376:-_chr8:37529097|37529190:-_chr8:37531312|37531401:-_chr8:37552508|37552707:-","UN_LINC01605_LS0064","LINC01605","lncRNA gene","no",3.08,0,0,0.01,92,0,0,"0(0)","ESCA;LUSC","no","NA","TE_intersect_:37531289|chr8|37531289|37531579|AluSx:Alu:SINE|151|+","intron_intersect_chr8:37531398|37554022","intron_intersect_chr8:37531398|37554022"]
["chr8:38510726|38520216:+","chr8:38510530|38510726:+_chr8:38520216|38521737:+","UN_TACC1_UP_LS0006","TACC1","protein coding gene","no",1.5,0,0,0.007,68,0,0,"0(0)","BRCA","no","NA","NA","NA","intron_intersect_chr8:38516512|38528323"]
["chr8:40398772|40402569:-","chr8:40393552|40396080:-_chr8:40398652|40398772:-_chr8:40402569|40402610:-_chr8:40405938|40406108:-","UN_SIRLNT_UP_LS0004","SIRLNT","lncRNA gene","no",2.27,0,0,0.009,88,0,0,"0(0)","BRCA","no","TE_intersect_:40402299|chr8|40402299|40402703|MSTB:ERVL-MaLR:LTR|176|-","NA","NA","intron_intersect_chr8:40370920|40401015"]
["chr8:42392220|42393843:+","chr8:42392022|42392220:+_chr8:42393843|42393884:+_chr8:42394210|42394278:+_chr8:42395084|42395133:+_chr8:42398712|42398864:+_chr8:42399651|42399703:+_chr8:42401788|42401886:+","UN_VDAC3_LS0002","VDAC3","protein coding gene","no",0.92,0,0,0.005,47,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr8:42391928|42393811","exon_intersect_chr8:42393811|42393884"]
["chr8:46593631|46595115:-","chr8:46579114|46579551:-_chr8:46580082|46580237:-_chr8:46593464|46593631:-_chr8:46595115|46595241:-_chr8:46596042|46596227:-_chr8:46614277|46614534:-_chr8:46615139|46615174:-_chr8:46617548|46617670:-","ASNSP1_LS008","ASNSP1","pseudogene","no",3.64,0,0,0.034,325,0,0,"0(0)","ESCA;LIHC;LUSC;OV;TGCT;UCS","yes","NA","NA","exon_intersect_chr8:46595115|46595241","intron_intersect_chr8:46592267|46595115"]
["chr8:47092364|47122207:-","chr8:47085431|47089806:-_chr8:47091401|47091584:-_chr8:47092307|47092364:-_chr8:47122207|47122373:-_chr8:47123417|47123461:-_chr8:47124848|47124918:-_chr8:47130312|47130382:-_chr8:47133124|47138227:-_chr8:47144742|47144853:-_chr8:47150110|47150216:-_chr8:47167264|47167477:-_chr8:47168740|47168832:-_chr8:47180056|47180337:-","UN_AC120036.1_LS0010","AC120036.1","pseudogene","no",6.21,0,0,0.024,232,0,0,"0(0)","ESCA;LAML;LUAD;TGCT;THYM","no","NA","TE_intersect_:47092134|chr8|47092134|47092665|MER1A:hAT-Charlie:DNA|139|-","exon_intersect_chr8:47122207|47122373","intron_intersect_chr8:47090806|47100929"]
["chr8:47167477|47168881:-","chr8:47166130|47166378:-_chr8:47167264|47167477:-_chr8:47168881|47168978:-_chr8:47175930|47176191:-","UN_AC120036.1_LS0045","AC120036.1","pseudogene","no",4.13,0,0,0.007,70,0,0,"0(0)","LAML;TGCT","no","TE_intersect_:47168722|chr8|47168722|47169018|AluJb:Alu:SINE|172|+","NA","intron_intersect_chr8:47165524|47189305","intron_intersect_chr8:47165524|47189305"]
["chr8:47314019|47396376:+","chr8:47260965|47260991:+_chr8:47279862|47280017:+_chr8:47284028|47284094:+_chr8:47291033|47291137:+_chr8:47293867|47294030:+_chr8:47313135|47314019:+_chr8:47396376|47396626:+_chr8:47407861|47407961:+_chr8:47440323|47440542:+","UN_SPIDR_LS0015","SPIDR","protein coding gene","no",1.84,0,0,0.002,22,0,0,"0(0)","LAML","no","TE_intersect_:47313781|chr8|47313781|47314374|L1ME2z:L1:LINE|255|+","NA","intron_intersect_chr8:47294428|47330780","exon_intersect_chr8:47396376|47396626"]
["chr8:48683179|48695424:+","chr8:48682980|48683179:+_chr8:48695424|48695486:+_chr8:48696558|48698495:+","UN_AC022915.2_LS0007","AC022915.2","lncRNA gene","no",2.27,0,0,0.003,27,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chr8:48658894|48695424","exon_intersect_chr8:48695424|48695486"]
["chr8:51542806|51556840:-","chr8:51542123|51542806:-_chr8:51556840|51556911:-_chr8:51592627|51592698:-_chr8:51654689|51654760:-_chr8:51809181|51809445:-","UN_PXDNL_LS0027","PXDNL","protein coding gene","no",7.75,0,0,0.001,14,0,0,"0(0)","DLBC","no","NA","TE_intersect_:51542526|chr8|51542526|51542834|AluSx1:Alu:SINE|156|+","exon_intersect_chr8:51556840|51556911","intron_intersect_chr8:51499770|51556840"]
["chr8:53363709|53400299:+","chr8:53323151|53323265:+_chr8:53324223|53324277:+_chr8:53362312|53362466:+_chr8:53363585|53363709:+_chr8:53400299|53400637:+","UN_AC022034.3_UP_LS0004","AC022034.3","lncRNA gene","no",4.91,0,0,0.004,42,0,0,"0(0)","STAD","no","NA","NA","NA","NA"]
["chr8:53913696|53939576:+","chr8:53879884|53880286:+_chr8:53913497|53913696:+_chr8:53939576|53939724:+_chr8:53946665|53946748:+_chr8:53954076|53954142:+","UN_RGS20_LS0029","RGS20","protein coding gene","no",6.52,0,0,0.003,31,0,0,"0(0)","UVM","no","TE_intersect_:53913411|chr8|53913411|53913861|MLT1C:ERVL-MaLR:LTR|201|+","NA","exon_intersect_chr8:53913497|53913922","exon_intersect_chr8:53939576|53939724"]
["chr8:54464565|54465983:-","chr8:54461422|54464565:-_chr8:54465983|54467249:-","UN_AC060764.1_UP_LS0055","AC060764.1","pseudogene","no",0.81,0,0,0.002,22,0,0,"0(0)","OV","no","NA","TE_intersect_:54464463|chr8|54464463|54464573|MIRc:MIR:SINE|309|+","NA","NA"]
["chr8:56967218|56967936:-","chr8:56957933|56964064:-_chr8:56966191|56966352:-_chr8:56967110|56967218:-_chr8:56967936|56967998:-_chr8:56978050|56978145:-_chr8:56980035|56980112:-","UN_IMPAD1_LS0019","IMPAD1","protein coding gene","no",3.88,0,0,0.012,111,0,0,"0(0)","STAD;THYM","no","TE_intersect_:56967832|chr8|56967832|56968332|L1MC4:L1:LINE|290|+","NA","intron_intersect_chr8:56967218|56978050","intron_intersect_chr8:56967218|56978050"]
["chr8:58159038|58159773:-","chr8:58158723|58159038:-_chr8:58159773|58159820:-_chr8:58173636|58173742:-_chr8:58191549|58191713:-_chr8:58192259|58192401:-_chr8:58239307|58239440:-_chr8:58243725|58244146:-","UN_FAM110B_LS0019","FAM110B","protein coding gene","no",2.72,0,0,0.004,34,0,0,"0(0)","LGG","no","TE_intersect_:58159613|chr8|58159613|58159927|AluSz:Alu:SINE|124|+","NA","intron_intersect_chr8:58148788|58189318","intron_intersect_chr8:58148788|58189318"]
["chr8:58701999|58702983:-","chr8:58699098|58701999:-_chr8:58702983|58703187:-_chr8:58706877|58707028:-_chr8:58708619|58708759:-_chr8:58710621|58710737:-_chr8:58711348|58711494:-_chr8:58728164|58728325:-_chr8:58728430|58728485:-","UN_NSMAF_UP_LS0006","NSMAF","protein coding gene","no",3.74,0,0,0.004,41,0,0,"0(0)","LGG","no","TE_intersect_:58702928|chr8|58702928|58703268|MLT1A0:ERVL-MaLR:LTR|168|+","NA","NA","NA"]
["chr8:60405249|60508647:-","chr8:60402176|60405249:-_chr8:60508647|60508762:-_chr8:60516598|60516780:-","UN_LINC01301_LS0006","LINC01301","lncRNA gene","no",2.4,0,0,0.011,110,0.001,1,"0(0)","LGG;OV","no","TE_intersect_:60508408|chr8|60508408|60508881|MLT1F:ERVL-MaLR:LTR|210|+","NA","exon_intersect_chr8:60508647|60508762","intron_intersect_chr8:60405249|60408355"]
["chr8:63649807|63651826:+","chr8:63649541|63649807:+_chr8:63651826|63651918:+_chr8:63691731|63692058:+","UN_AC069133.1_UP_LS0003","AC069133.1","lncRNA gene","no",2.28,0,0,0.004,39,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr8:64804195|64805589:-","chr8:64801358|64801526:-_chr8:64802368|64802485:-_chr8:64804128|64804195:-_chr8:64805589|64805698:-_chr8:64817324|64817573:-","UN_AC104232.1_LS0004","AC104232.1","lncRNA gene","no",3.83,0,0,0.005,46,0,0,"0(0)","LAML","no","TE_intersect_:64805441|chr8|64805441|64805829|LTR16A:ERVL:LTR|298|-","NA","exon_intersect_chr8:64805589|64805700","exon_intersect_chr8:64804173|64804278"]
["chr8:66674127|66705415:-","chr8:66668564|66674127:-_chr8:66705415|66705445:-","UN_SGK3_LS0008","SGK3","protein coding gene","no",1.56,0,0,0.005,49,0,0,"0(0)","LAML","no","TE_intersect_:66705284|chr8|66705284|66705580|AluY:Alu:SINE|57|-","TE_intersect_:66674002|chr8|66674002|66674295|AluSx1:Alu:SINE|106|-","intron_intersect_chr8:66690760|66712418","intron_intersect_chr8:66667701|66674499"]
["chr8:6835617|6836168:+","chr8:6835565|6835617:+_chr8:6836168|6836221:+_chr8:6841668|6842428:+","UN_GS1-24F4.2_LS0001","GS1-24F4.2","lncRNA gene","no",1.17,0,0,0.004,38,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chr8:6835436|6835644","exon_intersect_chr8:6835966|6836221"]
["chr8:69165649|69165914:+","chr8:69140052|69141377:+_chr8:69165383|69165649:+_chr8:69165914|69171675:+","UN_AC022790.1_UP_LS0010","AC022790.1","pseudogene","no",3.28,0,0,0.004,38,0,0,"0(0)","OV","no","TE_intersect_:69165641|chr8|69165641|69165870|L1MA9:L1:LINE|169|-","NA","NA","NA"]
["chr8:6936180|6936512:+","chr8:6931769|6931958:+_chr8:6935947|6936180:+_chr8:6936512|6936620:+_chr8:6937568|6937977:+","UN_DEFA4_LS0002","DEFA4","protein coding gene","no",2.64,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr8:6936141|6936728","intron_intersect_chr8:6936141|6936728"]
["chr8:71550292|71554376:-","chr8:71549751|71550292:-_chr8:71554376|71554598:-","UN_EYA1_LS0036","EYA1","protein coding gene","no",3.58,0,0,0.006,57,0,0,"0(0)","THYM;UCS","no","NA","NA","intron_intersect_chr8:71550292|71568173","intron_intersect_chr8:71550292|71568173"]
["chr8:73292396|73292689:-","chr8:73291783|73291910:-_chr8:73292239|73292396:-_chr8:73292689|73292797:-_chr8:73293599|73293633:-","UN_RPL7_LS0021","RPL7","protein coding gene","no",1898.18,0,0,0.009,88,0,0,"0(0)","DLBC;UCS","no","NA","NA","exon_intersect_chr8:73292689|73292797","exon_intersect_chr8:73292239|73292405"]
["chr8:75026935|75029161:-","chr8:75025645|75026935:-_chr8:75029161|75029459:-_chr8:75278357|75278461:-","UN_CRISPLD1_LS0007","CRISPLD1","protein coding gene","no",4.17,0,0,0.008,77,0,0,"0(0)","OV;THYM","no","NA","NA","intron_intersect_chr8:75026935|75029379","intron_intersect_chr8:75026935|75029379"]
["chr8:75775582|75811853:+","chr8:75775444|75775582:+_chr8:75811853|75811970:+","UN_AC067773.1_UP_LS0006","AC067773.1","lncRNA gene","no",4.62,0,0,0.004,41,0,0,"0(0)","TGCT","no","TE_intersect_:75775365|chr8|75775365|75775661|MLT1F:ERVL-MaLR:LTR|247|+","TE_intersect_:75811833|chr8|75811833|75811954|AluJb:Alu:SINE|167|-","NA","NA"]
["chr8:7674446|7675169:-","chr8:7674045|7674446:-_chr8:7675169|7675771:-","UN_AC134684.9_UP_LS0005","AC134684.9","protein coding gene","no",3.35,0,0,0.008,75,0,0,"0(0)","GBM;LGG;THYM","no","NA","TE_intersect_:7674141|chr8|7674141|7674450|AluSx:Alu:SINE|126|-","NA","NA"]
["chr8:78169061|78276637:-","chr8:78167637|78167853:-_chr8:78169009|78169061:-_chr8:78276637|78276717:-_chr8:78430856|78430948:-_chr8:78556499|78556599:-_chr8:78558424|78558496:-","UN_HIGD1AP18_UP_LS0030","HIGD1AP18","pseudogene","no",6.61,0,0,0.002,15,0,0,"0(0)","KICH","no","NA","TE_intersect_:78168463|chr8|78168463|78169477|L1M5:L1:LINE|268|+","NA","NA"]
["chr8:8060529|8067528:+","chr8:8059909|8060529:+_chr8:8067528|8072800:+","UN_AC105233.5_LS0007","AC105233.5","lncRNA gene","no",2.41,0,0,0.003,31,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chr8:81442009|81442064:+","chr8:81441599|81442009:+_chr8:81442064|81442290:+","UN_PMP2_LS0005","PMP2","protein coding gene","no",19.75,0,0,0.015,139,0,0,"0(0)","GBM;LGG","no","TE_intersect_:81441615|chr8|81441615|81442280|L1MC4:L1:LINE|242|-","TE_intersect_:81441615|chr8|81441615|81442280|L1MC4:L1:LINE|242|-","exon_intersect_chr8:81440326|81443448","exon_intersect_chr8:81440326|81443448"]
["chr8:83492265|83492867:-","chr8:83489809|83491104:-_chr8:83492188|83492265:-_chr8:83492867|83493005:-_chr8:83508336|83508676:-","UN_AC090132.2_UP_LS0012","AC090132.2","pseudogene","no",39.77,0,0,0.005,52,0,0,"0(0)","OV","no","TE_intersect_:83492831|chr8|83492831|83493151|MLT1A1:ERVL-MaLR:LTR|191|-","TE_intersect_:83491990|chr8|83491990|83492289|AluJr:Alu:SINE|194|+","NA","NA"]
["chr8:85281639|85315398:+","chr8:85245547|85245865:+_chr8:85250740|85250937:+_chr8:85259421|85259539:+_chr8:85266608|85266703:+_chr8:85267902|85267964:+_chr8:85268472|85268627:+_chr8:85281230|85281639:+_chr8:85315398|85315445:+","UN_CA3_UP_LS0013","CA3","protein coding gene","no",3,0,0,0.003,30,0,0,"0(0)","STAD","no","TE_intersect_:85281510|chr8|85281510|85281816|AluJr:Alu:SINE|189|-","TE_intersect_:85315392|chr8|85315392|85315694|AluSz:Alu:SINE|149|+","exon_intersect_chr8:85281230|85284073","NA"]
["chr8:85281639|85438002:+","chr8:85245765|85245865:+_chr8:85250740|85250937:+_chr8:85259421|85259539:+_chr8:85266608|85266703:+_chr8:85267902|85267964:+_chr8:85268472|85268627:+_chr8:85281230|85281286:+_chr8:85281532|85281639:+_chr8:85438002|85438943:+_chr8:85439712|85439909:+_chr8:85442073|85442191:+_chr8:85444034|85444126:+_chr8:85445156|85445218:+_chr8:85446142|85446297:+_chr8:85448034|85449040:+","UN_CA2_UP_LS0007","CA2","protein coding gene","no",3.12,0,0,0.006,58,0,0,"0(0)","STAD","no","TE_intersect_:85281510|chr8|85281510|85281816|AluJr:Alu:SINE|189|-","NA","exon_intersect_chr8:85281230|85284073","intron_intersect_chr8:85383235|85438827"]
["chr8:89497512|89533573:-","chr8:89497333|89497512:-_chr8:89533573|89533626:-","UN_KRT8P4_UP_LS0006","KRT8P4","pseudogene","no",2.59,0,0,0.016,158,0,0,"0(0)","ESCA;HNSC;LUSC","no","TE_intersect_:89533398|chr8|89533398|89533585|L1MEf:L1:LINE|219|+","NA","NA","NA"]
["chr8:89714733|89718896:+","chr8:89697983|89703252:+_chr8:89714633|89714733:+_chr8:89718896|89719065:+_chr8:89755805|89756232:+","UN_AF117829.1_LS0074","AF117829.1","lncRNA gene","no",2.85,0,0,0.001,12,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr8:89629271|89717399","exon_intersect_chr8:89717399|89721374"]
["chr8:91127791|91146263:-","chr8:91127495|91127791:-_chr8:91146263|91146375:-_chr8:91202061|91202202:-_chr8:91246228|91246265:-_chr8:91246575|91246697:-_chr8:91260158|91260273:-","UN_LRRC69_LS0010","LRRC69","protein coding gene","no",7.27,0,0,0.004,36,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr8:91139195|91157285","intron_intersect_chr8:91127160|91130299"]
["chr8:9172303|9174271:-","chr8:9168133|9172303:-_chr8:9174271|9174427:-_chr8:9179710|9179835:-_chr8:9182464|9182515:-_chr8:9183362|9183483:-","UN_AC022784.1_LS0024","AC022784.1","lncRNA gene","no",6.49,0,0,0.006,54,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr8:92954564|93003204:-","chr8:92916967|92917010:-_chr8:92921503|92921660:-_chr8:92954406|92954564:-_chr8:93003204|93003341:-","UN_TRIQK_LS0025","TRIQK","protein coding gene","no",3.53,0,0,0.008,80,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:93003138|chr8|93003138|93003309|MSTA:ERVL-MaLR:LTR|193|-","NA","intron_intersect_chr8:92974738|93017609","intron_intersect_chr8:92954564|92960501"]
["chr8:94418783|94432611:-","chr8:94371960|94372387:-_chr8:94378180|94378380:-_chr8:94378568|94378634:-_chr8:94380145|94380406:-_chr8:94386984|94387159:-_chr8:94391609|94391899:-_chr8:94393743|94393882:-_chr8:94399414|94399621:-_chr8:94400238|94400463:-_chr8:94404077|94404239:-_chr8:94407439|94407720:-_chr8:94411121|94411315:-_chr8:94418656|94418783:-_chr8:94432611|94432656:-_chr8:94436495|94436942:-","UN_FSBP_LS0028","FSBP","protein coding gene","no",1.97,0,0,0.009,82,0,0,"0(0)","STAD","no","NA","TE_intersect_:94418464|chr8|94418464|94418811|L1ME1:L1:LINE|261|-","exon_intersect_chr8:94431160|94432656","intron_intersect_chr8:94411315|94427712"]
["chr8:95509812|95610664:+","chr8:95509656|95509812:+_chr8:95610664|95610697:+_chr8:95800496|95800655:+_chr8:95810019|95810136:+","UN_C8orf37-AS1_LS0016","C8orf37-AS1","lncRNA gene","no",2.9,0,0,0.003,28,0,0,"0(0)","OV","no","TE_intersect_:95509518|chr8|95509518|95510148|L2b:L2:LINE|399|-","NA","intron_intersect_chr8:95506507|95524407","exon_intersect_chr8:95610664|95610702"]
["chr8:97322231|97325226:+","chr8:97321893|97322231:+_chr8:97325226|97328895:+","UN_SNORD3H_UP_LS0047","SNORD3H","small non-coding RNA gene","no",6.63,0,0,0.003,24,0,0,"0(0)","LIHC","no","NA","NA","NA","NA"]
["chr8:99063190|99063926:+","chr8:99013274|99013669:+_chr8:99013760|99013935:+_chr8:99038423|99038566:+_chr8:99063108|99063190:+_chr8:99063926|99064287:+_chr8:99096312|99096432:+_chr8:99102953|99103120:+_chr8:99111098|99111279:+_chr8:99115700|99115874:+_chr8:99121177|99121332:+","UN_VPS13B_LS0018","VPS13B","protein coding gene","no",5.07,0,0,0.004,34,0,0,"0(0)","LAML","no","TE_intersect_:99063097|chr8|99063097|99065200|L1PA6:L1:LINE|64|+","TE_intersect_:99063097|chr8|99063097|99065200|L1PA6:L1:LINE|64|+","intron_intersect_chr8:99038566|99091738","intron_intersect_chr8:99038566|99091738"]
["chr9:102503450|102503742:-","chr9:102497855|102500346:-_chr9:102503380|102503450:-_chr9:102503742|102503902:-_chr9:102655073|102655243:-","UN_ARL2BPP7_UP_LS0020","ARL2BPP7","pseudogene","no",3.36,0,0,0.006,57,0,0,"0(0)","SKCM;UVM","no","NA","NA","NA","NA"]
["chr9:105969617|105974971:-","chr9:105957831|105957954:-_chr9:105960477|105960603:-_chr9:105966752|105966854:-_chr9:105969432|105969617:-_chr9:105974971|105975220:-","UN_AL592437.1_UP_LS0005","AL592437.1","pseudogene","no",2.85,0,0,0.003,27,0,0,"0(0)","SKCM","no","NA","NA","NA","NA"]
["chr9:107385210|107390472:+","chr9:107384935|107385210:+_chr9:107390472|107391819:+","UN_AL389915.1_UP_LS0020","AL389915.1","pseudogene","no",4.45,0,0,0.003,29,0,0,"0(0)","PRAD","no","TE_intersect_:107383980|chr9|107383980|107385268|L2a:L2:LINE|321|-","TE_intersect_:107390127|chr9|107390127|107390532|L2c:L2:LINE|301|+","NA","NA"]
["chr9:10950170|10958621:-","chr9:10948372|10948481:-_chr9:10950009|10950170:-_chr9:10958621|10958804:-_chr9:10994188|10994265:-_chr9:11046535|11046656:-_chr9:11064969|11065116:-","UN_AL162413.1_UP_LS0011","AL162413.1","lncRNA gene","no",3.55,0,0,0.011,106,0,0,"0(0)","HNSC;UCS","no","NA","TE_intersect_:10948798|chr9|10948798|10952661|L1PA4:L1:LINE|45|+","NA","NA"]
["chr9:111618103|111618162:+","chr9:111616473|111618103:+_chr9:111618162|111618257:+","UN_LRRC37A5P_LS0005","LRRC37A5P","pseudogene","no",1.6,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:111616866|chr9|111616866|111618292|SVA_C:SVA:Retroposon|40|-","TE_intersect_:111616866|chr9|111616866|111618292|SVA_C:SVA:Retroposon|40|-","intron_intersect_chr9:111613553|111631040","intron_intersect_chr9:111613553|111631040"]
["chr9:11324|12123:+","chr9:11172|11324:+_chr9:12123|12340:+_chr9:12708|12810:+_chr9:13516|14522:+","UN_DDX11L5_UP_LS0001","DDX11L5","pseudogene","no",3.37,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr9:113618325|113623683:+","chr9:113614994|113615465:+_chr9:113617235|113617334:+_chr9:113618198|113618325:+_chr9:113623683|113623798:+_chr9:113624166|113624358:+_chr9:113626635|113628780:+","UN_AL157702.2_UP_LS0003","AL157702.2","lncRNA gene","no",1.6,0,0,0.002,18,0,0,"0(0)","UVM","no","TE_intersect_:113618275|chr9|113618275|113618580|AluSx:Alu:SINE|108|+","TE_intersect_:113623659|chr9|113623659|113623725|MamTip2:hAT-Tip100:DNA|231|+","NA","NA"]
["chr9:114410981|114417399:-","chr9:114402081|114402936:-_chr9:114403217|114403339:-_chr9:114403896|114404077:-_chr9:114406355|114406892:-_chr9:114407947|114408018:-_chr9:114410880|114410981:-_chr9:114417399|114417525:-_chr9:114417701|114420069:-_chr9:114420823|114420890:-_chr9:114423314|114423523:-_chr9:114424334|114424546:-_chr9:114424988|114426071:-","WHRN_LS007","WHRN","protein coding gene","no",3.74,0,0,0.004,40,0,0,"0(0)","PCPG","yes","NA","TE_intersect_:114410934|chr9|114410934|114411070|MIR:MIR:SINE|258|+","intron_intersect_chr9:114408018|114423314","intron_intersect_chr9:114408018|114423314"]
["chr9:117432451|117432843:-","chr9:117430489|117432451:-_chr9:117432843|117433406:-_chr9:117436871|117437754:-_chr9:117449058|117449368:-","UN_ASTN2_UP_LS0002","ASTN2","protein coding gene","no",2.98,0,0,0.003,33,0,0,"0(0)","PRAD","no","TE_intersect_:117432691|chr9|117432691|117432895|L2a:L2:LINE|306|-","TE_intersect_:117432209|chr9|117432209|117432627|MLT1J:ERVL-MaLR:LTR|291|-","NA","NA"]
["chr9:119764963|119805675:-","chr9:119430090|119430489:-_chr9:119431128|119431304:-_chr9:119618781|119618866:-_chr9:119764835|119764963:-_chr9:119805675|119805740:-_chr9:119858182|119858259:-","UN_BRINP1_UP_LS0011","BRINP1","protein coding gene","yes",3.95,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:119805357|chr9|119805357|119805794|MLT1C:ERVL-MaLR:LTR|243|+","NA","NA","NA"]
["chr9:121125936|121138545:+","chr9:121121801|121121951:+_chr9:121123931|121124084:+_chr9:121125716|121125936:+_chr9:121138545|121138679:+_chr9:121140641|121140786:+_chr9:121141381|121141588:+_chr9:121142091|121142270:+_chr9:121143903|121144082:+_chr9:121144840|121144959:+_chr9:121145244|121145385:+_chr9:121146108|121148861:+_chr9:121150170|121150483:+_chr9:121152485|121152693:+_chr9:121154721|121154913:+_chr9:121157470|121157600:+_chr9:121158855|121159019:+_chr9:121160143|121160302:+_chr9:121161856|121161971:+_chr9:121162054|121162271:+_chr9:121164943|121165100:+_chr9:121166107|121166180:+_chr9:121167489|121167677:+_chr9:121168096|121168321:+_chr9:121169611|121169816:+_chr9:121171408|121171548:+_chr9:121173243|121173509:+_chr9:121173675|121173737:+_chr9:121175018|121175224:+_chr9:121177163|121177608:+","UN_CNTRL_LS0026","CNTRL","protein coding gene","no",1.33,0,0,0.005,45,0,0,"0(0)","ESCA;LAML","no","NA","NA","intron_intersect_chr9:121125936|121135806","exon_intersect_chr9:121138545|121138679"]
["chr9:121870748|121947792:-","chr9:121815695|121822879:-_chr9:121860337|121860443:-_chr9:121870497|121870748:-_chr9:121947792|121947816:-","UN_TTLL11_LS0014","TTLL11","protein coding gene","no",1.99,0,0,0.005,49,0,0,"0(0)","THCA","no","NA","NA","intron_intersect_chr9:121885575|121963608","intron_intersect_chr9:121870748|121884636"]
["chr9:122875321|122877471:-","chr9:122873056|122875321:-_chr9:122877471|122877583:-_chr9:122879755|122879873:-_chr9:122879993|122880125:-_chr9:122880594|122880794:-_chr9:122883204|122883379:-_chr9:122890312|122890545:-_chr9:122892909|122893026:-_chr9:122897279|122897534:-","UN_RC3H2_LS0046","RC3H2","protein coding gene","no",3.76,0,0,0.001,12,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chr9:122877471|122877583","exon_intersect_chr9:122873786|122875368"]
["chr9:124493149|124496110:-","chr9:124481236|124483005:-_chr9:124491081|124491228:-_chr9:124493030|124493149:-_chr9:124496110|124496178:-","UN_NR5A1_LS0010","NR5A1","protein coding gene","no",4.79,0,0,0.007,63,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr9:124493149|124500090","intron_intersect_chr9:124493149|124500090"]
["chr9:125410583|125424874:+","chr9:125410483|125410583:+_chr9:125424874|125425016:+_chr9:125436430|125436546:+_chr9:125437734|125437948:+","UN_AL162584.1_UP_LS0004","AL162584.1","lncRNA gene","no",5.31,0,0,0.003,31,0,0,"0(0)","OV","no","NA","TE_intersect_:125424788|chr9|125424788|125425109|MLT1B:ERVL-MaLR:LTR|174|+","NA","NA"]
["chr9:127749665|127750925:-","chr9:127738486|127738921:-_chr9:127739682|127739885:-_chr9:127740258|127740369:-_chr9:127741788|127741959:-_chr9:127742849|127742964:-_chr9:127744564|127745099:-_chr9:127747147|127747271:-_chr9:127749211|127749665:-_chr9:127750925|127751300:-_chr9:127773990|127774467:-_chr9:127778591|127778741:-","UN_SH2D3C_LS0013","SH2D3C","protein coding gene","no",2.35,0,0,0.004,35,0,0,"0(0)","LAML","no","TE_intersect_:127750896|chr9|127750896|127751070|MIRb:MIR:SINE|232|-","NA","intron_intersect_chr9:127749665|127751172","intron_intersect_chr9:127749665|127751172"]
["chr9:128159599|128163443:+","chr9:128159339|128159599:+_chr9:128163443|128163929:+","UN_DNM1_UP_LS0003","DNM1","protein coding gene","no",8.56,0,0,0.016,151,0,0,"0(0)","COAD;PAAD;STAD","no","NA","NA","NA","exon_intersect_chr9:128163443|128163928"]
["chr9:128830005|128832291:-","chr9:128819653|128822833:-_chr9:128823747|128823894:-_chr9:128824072|128824174:-_chr9:128824771|128824869:-_chr9:128824977|128825049:-_chr9:128826022|128826152:-_chr9:128826384|128826433:-_chr9:128826540|128826629:-_chr9:128827032|128827191:-_chr9:128828735|128828860:-_chr9:128829110|128829155:-_chr9:128829745|128830005:-_chr9:128832291|128833643:-_chr9:128833740|128833826:-_chr9:128835323|128835402:-_chr9:128835481|128835667:-_chr9:128835779|128835868:-_chr9:128835997|128836073:-_chr9:128836802|128836922:-_chr9:128837685|128837813:-_chr9:128838051|128838137:-_chr9:128838218|128838367:-_chr9:128842654|128842801:-_chr9:128845353|128845411:-_chr9:128881897|128881929:-","UN_SPOUT1_UP_LS0001","SPOUT1","protein coding gene","no",2.41,0,0,0.006,61,0,0,"0(0)","LIHC","no","TE_intersect_:128832252|chr9|128832252|128832411|MIR1_Amn:MIR:SINE|291|+","NA","NA","NA"]
["chr9:129355598|129356253:+","chr9:129336879|129336988:+_chr9:129338792|129338917:+_chr9:129341832|129342043:+_chr9:129355458|129355598:+_chr9:129356253|129356334:+","UN_LINC01503_LS0035","LINC01503","lncRNA gene","no",2.07,0,0,0.015,144,0,0,"0(0)","ESCA","no","NA","TE_intersect_:129356159|chr9|129356159|129356332|MER103C:hAT-Charlie:DNA|278|+","intron_intersect_chr9:129355598|129359336","intron_intersect_chr9:129355598|129359336"]
["chr9:129890546|129890707:-","chr9:129887187|129890546:-_chr9:129890707|129895996:-_chr9:129899965|129900101:-_chr9:129900426|129900547:-_chr9:129902869|129903001:-_chr9:129908890|129908999:-_chr9:129924960|129925069:-","UN_FNBP1_LS0017","FNBP1","protein coding gene","no",1.8,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chr9:129890546|129895268","intron_intersect_chr9:129890546|129895268"]
["chr9:130886915|130886978:-","chr9:130886757|130886915:-_chr9:130886978|130887066:-","UN_ABL1_LS0109","ABL1","protein coding gene","yes",3.24,0,0,0.006,60,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr9:130883969|130887675","exon_intersect_chr9:130883969|130887675"]
["chr9:131735565|131739770:-","chr9:131576778|131579647:-_chr9:131580263|131580391:-_chr9:131582605|131582702:-_chr9:131584311|131584412:-_chr9:131584518|131584596:-_chr9:131587736|131587830:-_chr9:131587942|131588026:-_chr9:131588801|131588986:-_chr9:131589886|131589978:-_chr9:131592099|131592183:-_chr9:131596298|131596373:-_chr9:131598199|131598310:-_chr9:131602061|131602149:-_chr9:131619051|131619206:-_chr9:131621796|131621998:-_chr9:131625922|131626422:-_chr9:131627913|131628096:-_chr9:131628549|131628672:-_chr9:131629102|131629254:-_chr9:131630236|131630324:-_chr9:131638635|131638791:-_chr9:131643239|131643417:-_chr9:131650810|131650949:-_chr9:131735364|131735565:-_chr9:131739770|131739848:-","UN_RAPGEF1_LS0135","RAPGEF1","protein coding gene","no",1.15,0,0,0.001,11,0,0,"0(0)","DLBC","no","NA","TE_intersect_:131735481|chr9|131735481|131735576|L2b:L2:LINE|272|+","exon_intersect_chr9:131739770|131740074","intron_intersect_chr9:131725467|131737405"]
["chr9:132612255|132630264:-","chr9:132532188|132532201:-_chr9:132594547|132595112:-_chr9:132612087|132612255:-_chr9:132630264|132630403:-_chr9:132632041|132632091:-_chr9:132642004|132642063:-_chr9:132645895|132646071:-_chr9:132646823|132647058:-_chr9:132648189|132648295:-_chr9:132648432|132648520:-","UN_DDX31_LS0005","DDX31","protein coding gene","no",3.55,0,0,0.019,181,0,0,"0(0)","ESCA;GBM;OV;STAD","no","NA","NA","exon_intersect_chr9:132630264|132630403","exon_intersect_chr9:132612087|132612313"]
["chr9:133069236|133084931:+","chr9:133061978|133062271:+_chr9:133064404|133064554:+_chr9:133064640|133064762:+_chr9:133065040|133065237:+_chr9:133066530|133066660:+_chr9:133066838|133066945:+_chr9:133067088|133067205:+_chr9:133068672|133068858:+_chr9:133069056|133069236:+_chr9:133084931|133085043:+_chr9:133086258|133086457:+_chr9:133086786|133086972:+","UN_RF00019_UP_LS1954","RF00019","small non-coding RNA gene","no",92.36,2.23,0,0.006,62,0.007,5,"0(0)","PAAD","no","NA","NA","exon_intersect_chr9:133069056|133069259","exon_intersect_chr9:133084840|133085043"]
["chr9:133602248|133609077:-","chr9:133578415|133579429:-_chr9:133580131|133580246:-_chr9:133599168|133599349:-_chr9:133602201|133602248:-_chr9:133609077|133609355:-","UN_FAM163B_UP_LS0005","FAM163B","protein coding gene","no",3.29,0,0,0.001,14,0,0,"0(0)","PCPG","no","NA","TE_intersect_:133602245|chr9|133602245|133602376|MIR:MIR:SINE|244|-","NA","NA"]
["chr9:133608320|133609077:-","chr9:133577037|133579429:-_chr9:133579596|133579829:-_chr9:133580131|133580246:-_chr9:133607926|133607972:-_chr9:133608213|133608320:-_chr9:133609077|133609325:-","UN_FAM163B_UP_LS0008","FAM163B","protein coding gene","no",1.71,0,0,0.005,49,0,0,"0(0)","LGG;PCPG","no","NA","NA","NA","NA"]
["chr9:134502042|134505471:+","chr9:134501798|134502042:+_chr9:134505471|134505546:+_chr9:134544920|134545240:+","UN_AL669970.1_UP_LS0023","AL669970.1","lncRNA gene","no",5.8,0,0,0.011,109,0,0,"0(0)","MESO;OV;UCS","no","NA","NA","NA","NA"]
["chr9:134842387|134842501:-","chr9:134812621|134812718:-_chr9:134842172|134842387:-_chr9:134842501|134842777:-_chr9:134843656|134843830:-_chr9:134844039|134844095:-","UN_COL5A1_LS0106","COL5A1","protein coding gene","no",1.68,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr9:134842157|134844843","exon_intersect_chr9:134842157|134844843"]
["chr9:135372657|135373461:+","chr9:135370822|135371193:+_chr9:135371605|135371896:+_chr9:135372572|135372657:+_chr9:135373461|135373575:+_chr9:135374821|135374883:+","UN_SOCS5P2_UP_LS0003","SOCS5P2","pseudogene","no",4.7,0,0,0.003,31,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr9:135373575|135374821:+","chr9:135370822|135371193:+_chr9:135371605|135371896:+_chr9:135372572|135372657:+_chr9:135373461|135373575:+_chr9:135374821|135374883:+","UN_SOCS5P2_UP_LS0006","SOCS5P2","pseudogene","no",3.56,0,0,0.002,19,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chr9:135909486|135913404:+","chr9:135909141|135909486:+_chr9:135913404|135914911:+","UN_AL355574.1_LS0018","AL355574.1","lncRNA gene","no",2.58,0.01,0,0.035,338,0.001,1,"0(0)","DLBC;THYM","no","TE_intersect_:135909176|chr9|135909176|135909528|L1M4:L1:LINE|174|-","NA","intron_intersect_chr9:135908788|135913404","exon_intersect_chr9:135913404|135913513"]
["chr9:136577500|136587636:-","chr9:136575143|136575964:-_chr9:136577224|136577500:-_chr9:136587636|136587953:-","UN_MIR4674_UP_LS0007","MIR4674","small non-coding RNA gene","no",2.71,0,0,0.005,50,0,0,"0(0)","THYM","no","TE_intersect_:136587577|chr9|136587577|136587691|MIRb:MIR:SINE|310|+","TE_intersect_:136577424|chr9|136577424|136577507|L2a:L2:LINE|317|+","NA","NA"]
["chr9:136696099|136697613:-","chr9:136693177|136693652:-_chr9:136695979|136696099:-_chr9:136697613|136697701:-","UN_AGPAT2_UP_LS0007","AGPAT2","protein coding gene","no",7.02,0,0,0.012,113,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:136697582|chr9|136697582|136697865|L2b:L2:LINE|345|-","NA","NA","NA"]
["chr9:136975476|136975673:+","chr9:136975402|136975476:+_chr9:136975673|136975902:+_chr9:136976549|136976732:+_chr9:136977550|136977692:+_chr9:136978993|136979132:+_chr9:136979223|136979299:+_chr9:136979946|136980062:+_chr9:136980183|136980284:+_chr9:136980833|136980855:+_chr9:136981579|136981692:+","UN_PTGDS_LS0002","PTGDS","protein coding gene","no",2.94,0.01,0,0.005,51,0.001,1,"0(0)","LAML","no","NA","NA","exon_intersect_chr9:136975395|136975486","intron_intersect_chr9:136975486|136976549"]
["chr9:137298509|137298631:+","chr9:137295891|137297376:+_chr9:137297492|137297624:+_chr9:137298128|137298179:+_chr9:137298348|137298509:+_chr9:137298631|137298789:+_chr9:137300117|137300485:+","UN_NOXA1_UP_LS0016","NOXA1","protein coding gene","no",8.02,0,0,0.003,25,0,0,"0(0)","CHOL","no","NA","NA","NA","NA"]
["chr9:138113825|138114002:+","chr9:138113775|138113825:+_chr9:138114002|138114193:+_chr9:138114378|138114490:+_chr9:138115552|138115679:+_chr9:138117946|138118081:+_chr9:138118652|138118768:+_chr9:138120165|138120372:+_chr9:138120631|138120881:+_chr9:138121469|138122183:+","UN_CACNA1B_LS0041","CACNA1B","protein coding gene","no",1.4,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chr9:138112505|138114378","intron_intersect_chr9:138112505|138114378"]
["chr9:14592528|14602718:-","chr9:14590327|14592528:-_chr9:14602718|14602958:-","UN_AL159169.2_UP_LS0002","AL159169.2","lncRNA gene","no",1.98,0,0,0.003,25,0,0,"0(0)","LAML","no","TE_intersect_:14602715|chr9|14602715|14602776|L1ME1:L1:LINE|259|+","TE_intersect_:14592458|chr9|14592458|14593473|L1MB7:L1:LINE|216|+","NA","NA"]
["chr9:17290775|17298190:+","chr9:17290589|17290775:+_chr9:17298190|17298352:+_chr9:17309058|17309252:+_chr9:17330632|17330808:+_chr9:17332605|17332730:+_chr9:17340827|17340948:+_chr9:17342325|17342444:+_chr9:17366617|17366717:+_chr9:17388162|17388253:+_chr9:17394534|17395069:+_chr9:17409296|17409473:+_chr9:17415788|17415881:+_chr9:17415966|17416189:+_chr9:17457524|17457715:+_chr9:17462916|17463013:+_chr9:17464497|17464623:+_chr9:17465981|17466118:+_chr9:17466706|17466891:+_chr9:17484295|17484480:+_chr9:17486989|17487066:+_chr9:17502551|17503919:+","UN_CNTLN_LS0020","CNTLN","protein coding gene","no",1.63,0,0,0.013,128,0,0,"0(0)","ESCA;OV;THYM","no","TE_intersect_:17285003|chr9|17285003|17291034|L1PA2:L1:LINE|20|-","NA","intron_intersect_chr9:17273866|17298190","exon_intersect_chr9:17298190|17302051"]
["chr9:19487562|19554106:+","chr9:19482322|19482696:+_chr9:19487493|19487562:+_chr9:19554106|19554278:+_chr9:19556021|19556124:+_chr9:19561830|19564521:+","UN_C11orf98P1_UP_LS0014","C11orf98P1","pseudogene","no",3.21,0,0,0.008,78,0,0,"0(0)","GBM;SKCM","no","NA","TE_intersect_:19553958|chr9|19553958|19554292|MLT1B:ERVL-MaLR:LTR|143|+","NA","intron_intersect_chr9:19550268|19573351"]
["chr9:22018649|22026931:-","chr9:22016934|22018649:-_chr9:22026931|22027106:-_chr9:22027565|22027822:-_chr9:22037536|22037655:-_chr9:22060732|22060850:-","UN_AL359922.1_LS0170","AL359922.1","protein coding gene","no",2.82,0,0,0.002,18,0,0,"0(0)","SARC","no","TE_intersect_:22023743|chr9|22023743|22027158|L1PA13:L1:LINE|199|-","TE_intersect_:22018375|chr9|22018375|22018670|AluSx1:Alu:SINE|95|+","intron_intersect_chr9:22012536|22029433","intron_intersect_chr9:22012536|22029433"]
["chr9:23605101|23650997:-","chr9:23604378|23605101:-_chr9:23650997|23651064:-_chr9:23671729|23671817:-_chr9:23672289|23672561:-","UN_AL445623.2_LS0010","AL445623.2","lncRNA gene","no",2.4,0,0,0.005,51,0,0,"0(0)","GBM;LGG","no","TE_intersect_:23650800|chr9|23650800|23651068|MLT1J2:ERVL-MaLR:LTR|251|+","NA","NA","NA"]
["chr9:26261368|26261529:-","chr9:26261167|26261368:-_chr9:26261529|26261975:-","UN_TUSC1_UP_LS0006","TUSC1","protein coding gene","yes",3.42,0,0,0.004,37,0,0,"0(0)","MESO","no","TE_intersect_:26261369|chr9|26261369|26261917|LTR19B:ERV1:LTR|109|-","TE_intersect_:26261245|chr9|26261245|26261369|LTR26:ERV1:LTR|142|-","NA","NA"]
["chr9:26748312|26748733:+","chr9:26746976|26747044:+_chr9:26747595|26747674:+_chr9:26748216|26748312:+_chr9:26748733|26748957:+_chr9:26749979|26750088:+","UN_AL451137.1_LS0003","AL451137.1","lncRNA gene","no",2.48,0,0,0.004,43,0,0,"0(0)","OV","no","TE_intersect_:26748021|chr9|26748021|26748394|THE1C:ERVL-MaLR:LTR|115|+","TE_intersect_:26748510|chr9|26748510|26749035|MLT2B3:ERVL:LTR|227|+","intron_intersect_chr9:26748312|26786786","intron_intersect_chr9:26748312|26786786"]
["chr9:29718001|29719040:-","chr9:29716880|29718001:-_chr9:29719040|29719154:-","UN_AL162388.1_UP_LS0015","AL162388.1","pseudogene","no",1.27,0,0,0.016,153,0,0,"0(0)","KIRC;KIRP","no","NA","TE_intersect_:29717946|chr9|29717946|29718136|ORSL-2a:hAT-Tip100:DNA|288|+","NA","NA"]
["chr9:31973112|31977495:+","chr9:31848678|31848907:+_chr9:31973015|31973112:+_chr9:31977495|31977526:+","UN_RNA5SP281_UP_LS0023","RNA5SP281","no","no",2.07,0,0,0.014,132,0,0,"0(0)","LUSC","no","NA","NA","NA","NA"]
["chr9:33111757|33112063:+","chr9:33111588|33111757:+_chr9:33112063|33112182:+_chr9:33112223|33112404:+_chr9:33167059|33167204:+","UN_B4GALT1_LS0050","B4GALT1","protein coding gene","no",4.24,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr9:33110637|33113586","exon_intersect_chr9:33110637|33113586"]
["chr9:34137756|34138032:+","chr9:34137014|34137756:+_chr9:34138032|34139048:+","UN_UBAP1_UP_LS0004","UBAP1","protein coding gene","no",7.84,0,0,0.003,32,0,0,"0(0)","ESCA","no","TE_intersect_:34136814|chr9|34136814|34138766|SVA_D:SVA:Retroposon|33|+","TE_intersect_:34136814|chr9|34136814|34138766|SVA_D:SVA:Retroposon|33|+","NA","NA"]
["chr9:3523761|3525369:-","chr9:3522826|3523761:-_chr9:3525369|3525510:-","UN_RFX3_LS0041","RFX3","protein coding gene","no",1.77,0,0,0.002,15,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chr9:3490345|3525747","intron_intersect_chr9:3490345|3525747"]
["chr9:35736448|35736541:-","chr9:35736404|35736448:-_chr9:35736541|35736760:-","UN_CREB3_LS0015","CREB3","protein coding gene","no",1.9,0,0,0.003,27,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chr9:35736392|35737007","exon_intersect_chr9:35736392|35737007"]
["chr9:37405505|37407542:-","chr9:37405206|37405505:-_chr9:37407542|37407620:-_chr9:37408571|37408668:-_chr9:37408892|37409354:-","UN_LINC01627_UP_LS0011","LINC01627","lncRNA gene","no",9.94,0,0,0.003,24,0,0,"0(0)","DLBC","no","NA","TE_intersect_:37405136|chr9|37405136|37405751|LTR48B:ERV1:LTR|240|-","NA","NA"]
["chr9:38414203|38414365:-","chr9:38406525|38409217:-_chr9:38411391|38411549:-_chr9:38413237|38413353:-_chr9:38414094|38414203:-_chr9:38414365|38414730:-","UN_IGFBPL1_LS0005","IGFBPL1","protein coding gene","yes",1.64,0,0,0.006,59,0,0,"0(0)","GBM;LGG","no","TE_intersect_:38414336|chr9|38414336|38414535|MIR3:MIR:SINE|269|-","NA","intron_intersect_chr9:38414203|38423965","intron_intersect_chr9:38414203|38423965"]
["chr9:41238766|41239644:+","chr9:41238506|41238766:+_chr9:41239644|41241124:+","UN_AL845472.1_UP_LS0002","AL845472.1","lncRNA gene","no",2.66,0,0,0.009,87,0,0,"0(0)","OV","no","TE_intersect_:41238504|chr9|41238504|41240350|L1M1:L1:LINE|196|-","TE_intersect_:41238504|chr9|41238504|41240350|L1M1:L1:LINE|196|-","NA","NA"]
["chr9:5450754|5452531:-","chr9:5450574|5450754:-_chr9:5452531|5452675:-_chr9:5470851|5470960:-_chr9:5524536|5524629:-_chr9:5629567|5629770:-","UN_CD274_LS0004","CD274","protein coding gene","no",1.32,0,0,0.002,19,0,0,"0(0)","KICH","no","NA","NA","intron_intersect_chr9:5450596|5456100","intron_intersect_chr9:5450596|5456100"]
["chr9:5907721|5908640:+","chr9:5897564|5897653:+_chr9:5906885|5906998:+_chr9:5907645|5907721:+_chr9:5908640|5908943:+","UN_MLANA_LS0017","MLANA","protein coding gene","yes",1.24,0,0,0.005,52,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:5907670|chr9|5907670|5907976|AluSq2:Alu:SINE|114|+","NA","intron_intersect_chr9:5907194|5908640","exon_intersect_chr9:5908640|5910606"]
["chr9:62028527|62072997:+","chr9:61856527|61856814:+_chr9:61917468|61917607:+_chr9:62028427|62028527:+_chr9:62072997|62073110:+_chr9:62075672|62075751:+_chr9:62081739|62081787:+_chr9:62095847|62098027:+","UN_CR769775.2_LS0001","CR769775.2","lncRNA gene","no",3.89,0,0,0.004,35,0,0,"0(0)","LGG","no","TE_intersect_:62028018|chr9|62028018|62028837|L1MB5:L1:LINE|262|-","NA","intron_intersect_chr9:62028527|62073000","intron_intersect_chr9:62028527|62073000"]
["chr9:63986283|63991414:-","chr9:63974762|63974813:-_chr9:63986227|63986283:-_chr9:63991414|63991535:-","UN_AL163540.1_LS0006","AL163540.1","pseudogene","no",2.4,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr9:63986283|63992145","intron_intersect_chr9:63986283|63992145"]
["chr9:6629016|6630869:+","chr9:6622244|6622947:+_chr9:6627915|6629016:+_chr9:6630869|6631121:+","UN_GLDC_LS0022","GLDC","protein coding gene","no",1.14,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr9:6620319|6639139","intron_intersect_chr9:6620319|6639139"]
["chr9:68922965|68923302:+","chr9:68922841|68922965:+_chr9:68923302|68923386:+_chr9:68934890|68935045:+_chr9:68940646|68940790:+_chr9:68991140|68991257:+_chr9:69008447|69009174:+","UN_PIP5K1B_LS0030","PIP5K1B","protein coding gene","no",3.52,0,0,0.003,24,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr9:68919729|68923302","exon_intersect_chr9:68923302|68923386"]
["chr9:72647804|72648597:+","chr9:72647430|72647804:+_chr9:72648597|72648664:+_chr9:72651164|72653423:+","UN_TMC1_LS0031","TMC1","protein coding gene","no",1.44,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr9:72628344|72648597","exon_intersect_chr9:72648597|72648664"]
["chr9:73411717|73416939:+","chr9:73391817|73391968:+_chr9:73411585|73411717:+_chr9:73416939|73417089:+_chr9:73425602|73425741:+_chr9:73429039|73429158:+_chr9:73435785|73435849:+_chr9:73439072|73443156:+","UN_AL451127.1_UP_LS0029","AL451127.1","lncRNA gene","no",2.26,0,0,0.004,34,0,0,"0(0)","LIHC","no","NA","NA","NA","NA"]
["chr9:74483339|74486124:-","chr9:74455243|74455574:-_chr9:74477667|74477747:-_chr9:74483228|74483339:-_chr9:74486124|74486289:-_chr9:74497006|74497165:-","UN_AL513124.1_UP_LS0028","AL513124.1","pseudogene","no",4.18,0,0,0.004,35,0,0,"0(0)","GBM","no","NA","TE_intersect_:74483051|chr9|74483051|74483354|AluJo:Alu:SINE|172|+","intron_intersect_chr9:74485680|74486128","NA"]
["chr9:77761113|77762121:+","chr9:77759615|77761113:+_chr9:77762121|77766121:+","UN_GNAQ_LS0015","GNAQ","protein coding gene","yes",3.53,0,0,0.001,11,0,0,"0(0)","TGCT","no","TE_intersect_:77760217|chr9|77760217|77761373|SVA_D:SVA:Retroposon|101|+","TE_intersect_:77761373|chr9|77761373|77763116|SVA_D:SVA:Retroposon|88|+","intron_intersect_chr9:77728667|77794463","intron_intersect_chr9:77728667|77794463"]
["chr9:805419|826680:-","chr9:802817|805419:-_chr9:826680|826755:-","UN_AL136979.1_UP_LS0018","AL136979.1","lncRNA gene","no",2.66,0,0,0.022,206,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chr9:82744444|82757725:-","chr9:82744287|82744444:-_chr9:82757725|82757857:-","UN_AL162726.3_LS0045","AL162726.3","pseudogene","no",5.47,0,0,0.034,325,0,0,"0(0)","BLCA;ESCA;LUSC;OV;STAD","no","TE_intersect_:82751810|chr9|82751810|82757866|L1PA3:L1:LINE|29|-","NA","NA","exon_intersect_chr9:82744067|82744792"]
["chr9:84294275|84294539:-","chr9:84275457|84278344:-_chr9:84279265|84279385:-_chr9:84279975|84280073:-_chr9:84280801|84280882:-_chr9:84285345|84285542:-_chr9:84285943|84286111:-_chr9:84288048|84288178:-_chr9:84290154|84290279:-_chr9:84292668|84292748:-_chr9:84294195|84294275:-_chr9:84294539|84294635:-","UN_SLC28A3_LS0014","SLC28A3","protein coding gene","no",1.09,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chr9:84294275|84297221","intron_intersect_chr9:84294275|84297221"]
["chr9:86033391|86035364:-","chr9:86026148|86027893:-_chr9:86032008|86032067:-_chr9:86033282|86033391:-_chr9:86035364|86035625:-_chr9:86036348|86036507:-_chr9:86040739|86040868:-_chr9:86046470|86046572:-_chr9:86052537|86052591:-_chr9:86077412|86077591:-_chr9:86079192|86079341:-_chr9:86099411|86099489:-","UN_GOLM1_LS0033","GOLM1","protein coding gene","no",13.64,0,0,0.003,31,0.001,1,"0(0)","PAAD","no","NA","NA","intron_intersect_chr9:86033395|86035368","exon_intersect_chr9:86033282|86033395"]
["chr9:87758197|87758452:-","chr9:87757521|87758197:-_chr9:87758452|87758660:-_chr9:87758953|87759939:-","UN_AL513318.1_UP_LS0059","AL513318.1","pseudogene","no",1.69,0,0,0.002,18,0,0,"0(0)","ESCA","no","TE_intersect_:87757574|chr9|87757574|87758563|SVA_D:SVA:Retroposon|58|-","TE_intersect_:87757574|chr9|87757574|87758563|SVA_D:SVA:Retroposon|58|-","NA","NA"]
["chr9:87939708|87944580:+","chr9:87939491|87939708:+_chr9:87944580|87944744:+_chr9:87967110|87967222:+_chr9:87967474|87967672:+_chr9:87968570|87968871:+","UN_AL353572.3_UP_LS0002","AL353572.3","protein coding gene","no",11.4,0,0,0.016,150,0,0,"0(0)","TGCT;THYM","no","NA","NA","NA","exon_intersect_chr9:87944276|87945023"]
["chr9:87939708|87944583:+","chr9:87939551|87939708:+_chr9:87944583|87944744:+_chr9:87967110|87967222:+_chr9:87967474|87967672:+_chr9:87968570|87968864:+","UN_AL353572.3_UP_LS0003","AL353572.3","protein coding gene","no",2.81,0,0,0.005,51,0,0,"0(0)","TGCT;THYM","no","NA","NA","NA","exon_intersect_chr9:87944276|87945023"]
["chr9:88114066|88117696:+","chr9:88113711|88114066:+_chr9:88117696|88117705:+","UN_AL353726.2_UP_LS0003","AL353726.2","lncRNA gene","no",2.91,0,0,0.003,29,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chr9:89324300|89325427:+","chr9:89322877|89324300:+_chr9:89325427|89325676:+_chr9:89325897|89326038:+_chr9:89328660|89328886:+_chr9:89332908|89332986:+_chr9:89334522|89334730:+_chr9:89338458|89338580:+_chr9:89339864|89339953:+_chr9:89341347|89341479:+_chr9:89346882|89347048:+_chr9:89348079|89348214:+_chr9:89349776|89349929:+_chr9:89350632|89350852:+_chr9:89357411|89357565:+_chr9:89357999|89358191:+_chr9:89358721|89359642:+","UN_SECISBP2_LS0014","SECISBP2","protein coding gene","no",2.2,0.12,0,0.003,31,0.001,1,"0(0)","LAML","no","NA","NA","exon_intersect_chr9:89322200|89325676","exon_intersect_chr9:89322200|89325676"]
["chr9:90896813|90898312:+","chr9:90801805|90801893:+_chr9:90843858|90844315:+_chr9:90845434|90845594:+_chr9:90862206|90862344:+_chr9:90864589|90864667:+_chr9:90865048|90865097:+_chr9:90867131|90867199:+_chr9:90874204|90874291:+_chr9:90874672|90874849:+_chr9:90877571|90877780:+_chr9:90878764|90878953:+_chr9:90887749|90887889:+_chr9:90888515|90888627:+_chr9:90895528|90896813:+_chr9:90898312|90898549:+","UN_SYK_LS0031","SYK","protein coding gene","yes",6.37,0,0,0.007,65,0,0,"0(0)","DLBC","no","TE_intersect_:90896771|chr9|90896771|90897047|AluSz:Alu:SINE|112|+","NA","exon_intersect_chr9:90895528|90898549","exon_intersect_chr9:90895528|90898549"]
["chr9:91119560|91135642:-","chr9:91119138|91119560:-_chr9:91135642|91135763:-_chr9:91163178|91163320:-","UN_LINC00484_LS0005","LINC00484","lncRNA gene","no",2.08,0,0,0.003,32,0,0,"0(0)","DLBC","no","TE_intersect_:91135484|chr9|91135484|91135789|AluSx:Alu:SINE|118|+","NA","intron_intersect_chr9:91119560|91159573","intron_intersect_chr9:91119560|91159573"]
["chr9:92831112|92831203:-","chr9:92829761|92830789:-_chr9:92830879|92831112:-_chr9:92831203|92832473:-","UN_ANKRD19P_LS0026","ANKRD19P","pseudogene","no",1.29,0,0,0.003,26,0,0,"0(0)","ESCA","no","TE_intersect_:92831066|chr9|92831066|92832473|SVA_D:SVA:Retroposon|96|-","TE_intersect_:92831066|chr9|92831066|92832473|SVA_D:SVA:Retroposon|96|-","intron_intersect_chr9:92829763|92836777","intron_intersect_chr9:92829763|92836777"]
["chr9:93953187|93956054:-","chr9:93951627|93952328:-_chr9:93952729|93952813:-_chr9:93952896|93953187:-_chr9:93956054|93956195:-_chr9:93956553|93956691:-","UN_FAM120AOS_UP_LS0010","FAM120AOS","protein coding gene","no",1.87,0,0,0.005,49,0,0,"0(0)","LUAD","no","NA","NA","exon_intersect_chr9:93955834|93956868","exon_intersect_chr9:93952896|93953431"]
["chr9:95853179|95853398:+","chr9:95852825|95853179:+_chr9:95853398|95853534:+_chr9:95880869|95881293:+_chr9:95897849|95897971:+_chr9:95907078|95907271:+_chr9:95915668|95915829:+_chr9:95916227|95916434:+_chr9:95921175|95921315:+_chr9:95922305|95922418:+_chr9:95923260|95923379:+_chr9:95928079|95928150:+_chr9:95928719|95928864:+_chr9:95941454|95941549:+_chr9:95955914|95956013:+_chr9:95966562|95966714:+_chr9:95970576|95970656:+_chr9:95971933|95973088:+_chr9:95978061|95978215:+_chr9:96004520|96004701:+_chr9:96012225|96014571:+","UN_LINC00476_LS0031","LINC00476","lncRNA gene","no",2.73,0,0,0.002,18,0,0,"0(0)","DLBC","no","NA","TE_intersect_:95853352|chr9|95853352|95853411|L3:CR1:LINE|309|-","intron_intersect_chr9:95850292|95859904","intron_intersect_chr9:95850292|95859904"]
["chr9:96869062|96870254:+","chr9:96865403|96865502:+_chr9:96868900|96869062:+_chr9:96870254|96875423:+","UN_ZNF782_LS0020","ZNF782","protein coding gene","no",2.36,0,0,0.004,43,0,0,"0(0)","HNSC","no","NA","NA","intron_intersect_chr9:96861603|96875468","intron_intersect_chr9:96861603|96875468"]
["chr9:98045839|98056400:+","chr9:98045574|98045839:+_chr9:98056400|98056940:+_chr9:98060782|98060997:+_chr9:98076918|98077017:+_chr9:98078193|98078347:+_chr9:98080816|98081082:+_chr9:98082846|98083093:+","UN_NANS_UP_LS0003","NANS","protein coding gene","no",3.01,0,0,0.008,74,0,0,"0(0)","STAD","no","TE_intersect_:98045711|chr9|98045711|98046431|MER57-int:ERV1:LTR|126|+","NA","NA","NA"]
["chr9:99194532|99198025:+","chr9:99165845|99165954:+_chr9:99191493|99191610:+_chr9:99192152|99192243:+_chr9:99194448|99194532:+_chr9:99198025|99198460:+","UN_SEC61B_UP_LS0010","SEC61B","protein coding gene","no",7.72,0,0,0.004,37,0,0,"0(0)","DLBC;TGCT","no","TE_intersect_:99194524|chr9|99194524|99194694|L1MC5:L1:LINE|318|-","TE_intersect_:99198014|chr9|99198014|99198484|MLT1N2:ERVL-MaLR:LTR|255|+","NA","NA"]
["chrX:100555952|100556080:+","chrX:100555488|100555611:+_chrX:100555916|100555952:+_chrX:100556080|100556665:+","UN_TNMD_UP_LS0009","TNMD","protein coding gene","no",1.22,0,0,0.002,20,0,0,"0(0)","ESCA","no","TE_intersect_:100555450|chrX|100555450|100556654|SVA_D:SVA:Retroposon|73|+","TE_intersect_:100555450|chrX|100555450|100556654|SVA_D:SVA:Retroposon|73|+","NA","NA"]
["chrX:102305746|102307026:+","chrX:102305661|102305746:+_chrX:102307026|102307121:+_chrX:102316963|102317152:+_chrX:102317379|102317529:+_chrX:102317833|102317916:+_chrX:102318028|102318132:+_chrX:102318248|102318328:+_chrX:102318515|102318584:+_chrX:102318741|102318829:+_chrX:102318950|102319057:+_chrX:102319237|102319346:+_chrX:102321025|102321061:+_chrX:102321442|102321510:+_chrX:102321597|102321652:+_chrX:102321784|102321891:+_chrX:102322012|102322070:+_chrX:102322209|102322324:+_chrX:102322420|102322462:+_chrX:102323063|102323135:+_chrX:102323670|102323852:+_chrX:102326263|102326323:+_chrX:102326470|102326717:+","UN_NXF2_LS0003","NXF2","protein coding gene","no",16.97,0,0,0.031,297,0,0,"0(0)","ESCA;LUSC;OV;READ;STAD;UCEC;UCS","no","NA","NA","intron_intersect_chrX:102261692|102307022","exon_intersect_chrX:102307022|102307121"]
["chrX:103356606|103357618:+","chrX:103356452|103356606:+_chrX:103357618|103358469:+","TCEAL9_LS005","TCEAL9","protein coding gene","no",2.53,0,0,0.003,29,0,0,"0(0)","STAD","yes","NA","NA","intron_intersect_chrX:103356606|103357083","exon_intersect_chrX:103357615|103358469"]
["chrX:105752982|105755177:+","chrX:105752805|105752982:+_chrX:105755177|105755347:+_chrX:105765185|105766040:+","UN_IL1RAPL2_LS0024","IL1RAPL2","protein coding gene","no",3.96,0,0,0.011,104,0,0,"0(0)","ESCA;LUSC","no","NA","NA","intron_intersect_chrX:105749103|105755177","exon_intersect_chrX:105755177|105755347"]
["chrX:107896360|107897521:-","chrX:107894635|107896360:-_chrX:107897521|107897562:-_chrX:107933030|107933120:-_chrX:107934635|107934680:-_chrX:107935792|107936200:-","UN_MID2_LS0005","MID2","protein coding gene","no",3.12,0,0,0.004,39,0,0,"0(0)","KIRC","no","NA","TE_intersect_:107896073|chrX|107896073|107896380|AluSz:Alu:SINE|108|+","intron_intersect_chrX:107896360|107901145","intron_intersect_chrX:107896360|107901145"]
["chrX:109388663|109389561:-","chrX:109370643|109372999:-_chrX:109375898|109375986:-_chrX:109376079|109376167:-_chrX:109382118|109382212:-_chrX:109385184|109385282:-_chrX:109388489|109388663:-_chrX:109389561|109389615:-_chrX:109391911|109392103:-_chrX:109392892|109393055:-_chrX:109395341|109395734:-","UN_GUCY2F_LS0004","GUCY2F","protein coding gene","no",3.18,0,0,0.004,34,0,0,"0(0)","THYM","no","TE_intersect_:109389489|chrX|109389489|109389706|MIR:MIR:SINE|274|+","NA","intron_intersect_chrX:109388663|109391911","intron_intersect_chrX:109388663|109391911"]
["chrX:111504363|111557138:-","chrX:111501357|111504363:-_chrX:111557138|111557255:-_chrX:111561000|111561182:-","UN_RNU6-496P_UP_LS0001","RNU6-496P","small non-coding RNA gene","no",2.22,0,0,0.003,24,0,0,"0(0)","PCPG","no","TE_intersect_:111556186|chrX|111556186|111557944|PABL_A-int:ERV1:LTR|70|-","NA","NA","NA"]
["chrX:112274595|112431114:+","chrX:112082914|112083117:+_chrX:112130983|112131101:+_chrX:112274473|112274595:+_chrX:112431114|112431168:+_chrX:112454500|112457112:+","UN_RTL4_UP_LS0005","RTL4","protein coding gene","no",2.28,0,0,0.006,55,0,0,"0(0)","THCA","no","NA","TE_intersect_:112430888|chrX|112430888|112431719|L1MC1:L1:LINE|168|-","NA","NA"]
["chrX:114461850|114584212:-","chrX:114077422|114077951:-_chrX:114461791|114461850:-_chrX:114584212|114584509:-","UN_AL953862.1_UP_LS0005","AL953862.1","pseudogene","no",2.95,0,0,0.007,66,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chrX:114584078|114584659","NA"]
["chrX:116925561|116925886:-","chrX:116924688|116925561:-_chrX:116925886|116926027:-_chrX:116926854|116927023:-_chrX:116948224|116948306:-","UN_RNU6-1323P_UP_LS0001","RNU6-1323P","small non-coding RNA gene","no",4.61,0,0,0.007,67,0,0,"0(0)","KICH","no","TE_intersect_:116925422|chrX|116925422|116927473|MER51-int:ERV1:LTR|145|-","TE_intersect_:116925422|chrX|116925422|116927473|MER51-int:ERV1:LTR|145|-","NA","NA"]
["chrX:118928600|118943162:+","chrX:118884852|118892202:+_chrX:118928308|118928600:+_chrX:118943162|118943518:+","UN_LONRF3_UP_LS0001","LONRF3","protein coding gene","no",3.64,0,0,0.017,160,0,0,"0(0)","ESCA;OV","no","TE_intersect_:118928507|chrX|118928507|118928678|LTR75:ERVL:LTR|174|+","TE_intersect_:118943149|chrX|118943149|118943477|MER65D:ERV1:LTR|119|+","NA","NA"]
["chrX:1200638|1200748:+","chrX:1199167|1200638:+_chrX:1200748|1202390:+","UN_CRLF2_LS0005","CRLF2","protein coding gene","yes",3.69,0,0,0.003,26,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrX:1199145|1202402","intron_intersect_chrX:1199145|1202402"]
["chrX:120943701|120944840:-","chrX:120943561|120943701:-_chrX:120944840|120944995:-_chrX:120945883|120946883:-","CT47A9_LS001","CT47A9","protein coding gene","no",0.23,0,0,0.01,96,0,0,"0(0)","LIHC;TGCT","yes","NA","NA","exon_intersect_chrX:120944840|120944995","intron_intersect_chrX:120943701|120944840"]
["chrX:120979040|120979928:-","chrX:120977606|120977746:-_chrX:120978885|120979040:-_chrX:120979928|120980928:-","CT47A2_LS002","CT47A2","protein coding gene","no",0.31,0,0,0.009,85,0,0,"0(0)","LIHC;TGCT","yes","NA","NA","exon_intersect_chrX:120979928|120980928","intron_intersect_chrX:120979040|120979928"]
["chrX:123911217|123911352:-","chrX:123911076|123911217:-_chrX:123911352|123911484:-","UN_XIAP_LS0043","XIAP","protein coding gene","yes",2.36,0,0,0.006,61,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:123911196|chrX|123911196|123911490|AluSp:Alu:SINE|54|+","TE_intersect_:123911196|chrX|123911196|123911490|AluSp:Alu:SINE|54|+","exon_intersect_chrX:123906988|123913979","exon_intersect_chrX:123906988|123913979"]
["chrX:125099663|125100269:-","chrX:125099002|125099663:-_chrX:125100269|125100382:-_chrX:125154561|125155007:-","UN_TENM1_UP_LS0014","TENM1","protein coding gene","no",2.97,0,0,0.004,35,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:1294982|1295069:-","chrX:1292170|1293793:-_chrX:1293837|1293879:-_chrX:1294891|1294982:-_chrX:1295069|1295577:-_chrX:1295669|1298140:-_chrX:1298198|1298254:-_chrX:1298483|1298584:-_chrX:1298642|1300539:-","UN_CSF2RA_LS0035","CSF2RA","protein coding gene","no",1.67,0,0,0.001,11,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrX:1294461|1295427","intron_intersect_chrX:1294461|1295427"]
["chrX:13043857|13044199:-","chrX:13035712|13036018:-_chrX:13038416|13038503:-_chrX:13039808|13039916:-_chrX:13040758|13040872:-_chrX:13042918|13042949:-_chrX:13043128|13043248:-_chrX:13043729|13043857:-_chrX:13044199|13044403:-","UN_FAM9C_LS0003","FAM9C","protein coding gene","no",2.98,0,0,0.002,17,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:13043857|13044540","intron_intersect_chrX:13043857|13044540"]
["chrX:131082508|131083165:+","chrX:131082436|131082508:+_chrX:131083165|131083230:+_chrX:131083734|131083969:+_chrX:131084215|131084407:+_chrX:131084626|131084681:+_chrX:131084914|131085064:+_chrX:131085588|131085736:+_chrX:131085913|131086089:+_chrX:131086329|131086426:+_chrX:131086559|131086665:+_chrX:131088628|131089883:+","UN_ARHGAP36_LS0008","ARHGAP36","protein coding gene","no",2.96,0,0,0.011,106,0,0,"0(0)","LGG;PCPG","no","NA","NA","intron_intersect_chrX:131081918|131083165","exon_intersect_chrX:131083165|131083230"]
["chrX:131761977|131783887:-","chrX:131761807|131761977:-_chrX:131783887|131784039:-_chrX:131785157|131785258:-_chrX:131793994|131794115:-_chrX:131794297|131794466:-_chrX:131795278|131796167:-","UN_FIRRE_LS0035","FIRRE","lncRNA gene","no",3.2,0,0,0.008,73,0,0,"0(0)","OV","no","NA","TE_intersect_:131761699|chrX|131761699|131761999|AluSx:Alu:SINE|153|+","exon_intersect_chrX:131783887|131784039","intron_intersect_chrX:131756709|131768549"]
["chrX:13331273|13332486:+","chrX:13327379|13328660:+_chrX:13328764|13328824:+_chrX:13328996|13330904:+_chrX:13331180|13331273:+_chrX:13332486|13335088:+_chrX:13335482|13335545:+_chrX:13336379|13336460:+_chrX:13337895|13337948:+_chrX:13372368|13372472:+_chrX:13373517|13373631:+_chrX:13375401|13375483:+_chrX:13377190|13377335:+_chrX:13395262|13395392:+_chrX:13402715|13403000:+","UN_LINC01203_UP_LS0005","LINC01203","lncRNA gene","no",2.9,0,0,0.004,36,0,0,"0(0)","TGCT;THYM","no","TE_intersect_:13331206|chrX|13331206|13331502|AluY:Alu:SINE|81|+","NA","NA","NA"]
["chrX:13379136|13379254:+","chrX:13378948|13378966:+_chrX:13379015|13379136:+_chrX:13379254|13379388:+","UN_GPX1P1_LS0009","GPX1P1","pseudogene","no",2.42,0,0,0.003,28,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:13378735|13379340","exon_intersect_chrX:13378735|13379340"]
["chrX:134914298|134915182:-","chrX:134887626|134889192:-_chrX:134891479|134891640:-_chrX:134896817|134897034:-_chrX:134899090|134899165:-_chrX:134899280|134899534:-_chrX:134914076|134914298:-_chrX:134915182|134915227:-","UN_MOSPD1_LS0017","MOSPD1","protein coding gene","no",0.36,0,0,0.008,73,0.003,2,"0(0)","STAD","no","NA","NA","exon_intersect_chrX:134915182|134915267","intron_intersect_chrX:134899952|134915182"]
["chrX:135581143|135582241:+","chrX:135579937|135580162:+_chrX:135581050|135581143:+_chrX:135582241|135582502:+","INTS6L_LS027","INTS6L","protein coding gene","no",0.35,0,0,0.014,135,0.003,2,"0(0)","ESCA;LAML","yes","NA","NA","intron_intersect_chrX:135581143|135581528","exon_intersect_chrX:135581528|135582510"]
["chrX:135868067|135871574:-","chrX:135863776|135864028:-_chrX:135865251|135865344:-_chrX:135865725|135865973:-_chrX:135867893|135868067:-_chrX:135871574|135871812:-","CT45A9_LS004","CT45A9","protein coding gene","no",0.34,0,0,0.069,657,0.001,1,"0(0)","DLBC;LUAD;LUSC;SKCM;UCEC;UCS","yes","TE_intersect_:135871513|chrX|135871513|135871871|LTR41:ERVL:LTR|285|-","NA","exon_intersect_chrX:135871574|135871812","exon_intersect_chrX:135867893|135868069"]
["chrX:137413608|137427101:-","chrX:137413134|137413608:-_chrX:137427101|137427483:-","UN_AL355309.1_UP_LS0002","AL355309.1","pseudogene","no",2.82,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:137565685|137566522:+","chrX:137564323|137564403:+_chrX:137565511|137565685:+_chrX:137566522|137567751:+_chrX:137568902|137569065:+_chrX:137569891|137569995:+","UN_Z96074.1_UP_LS0001","Z96074.1","lncRNA gene","no",1.03,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","NA","NA","exon_intersect_chrX:137566142|137567751"]
["chrX:140857790|141066889:-","chrX:140856324|140857790:-_chrX:141066889|141066936:-_chrX:141072576|141072693:-_chrX:141092410|141092514:-","UN_CDR1_UP_LS0007","CDR1","protein coding gene","no",3.58,0,0,0.002,20,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:140892922|141066889:-","chrX:140892579|140892922:-_chrX:141066889|141066936:-_chrX:141072576|141072693:-_chrX:141092410|141092589:-","UN_CDR1_UP_LS0010","CDR1","protein coding gene","no",4.82,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","TE_intersect_:140892432|chrX|140892432|140893715|HSMAR1:TcMar-Mariner:DNA|91|+","NA","NA"]
["chrX:141024836|141066889:-","chrX:141024572|141024670:-_chrX:141024775|141024836:-_chrX:141066889|141066936:-_chrX:141072576|141072693:-_chrX:141092410|141092512:-","UN_MIR320D2_UP_LS0013","MIR320D2","small non-coding RNA gene","no",5.88,0,0,0.002,22,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:141520519|141590487:+","chrX:141494833|141494999:+_chrX:141514712|141514829:+_chrX:141520472|141520519:+_chrX:141590487|141590772:+","UN_SPANXA2-OT1_LS0005","SPANXA2-OT1","lncRNA gene","no",6,0,0,0.007,68,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:141520519|141583674","exon_intersect_chrX:141590487|141590772"]
["chrX:145674380|145759330:-","chrX:145674207|145674380:-_chrX:145759330|145759451:-_chrX:145820283|145820328:-_chrX:145822399|145822524:-_chrX:145863037|145863151:-_chrX:145881490|145881701:-","UN_AL713923.1_UP_LS0005","AL713923.1","lncRNA gene","no",4.26,0,0,0.013,129,0,0,"0(0)","KIRC;MESO","no","NA","NA","NA","NA"]
["chrX:148129479|148221712:+","chrX:148128856|148129479:+_chrX:148221712|148221935:+_chrX:148255152|148255227:+_chrX:148651999|148652119:+_chrX:148661908|148662768:+_chrX:148809876|148809920:+_chrX:148842966|148843002:+_chrX:148843382|148843415:+_chrX:148885889|148885985:+_chrX:148904221|148904258:+_chrX:148953580|148953739:+_chrX:148955603|148956613:+_chrX:148958337|148958458:+_chrX:148962715|148962937:+_chrX:148966790|148967079:+_chrX:148967629|148967692:+_chrX:148973471|148973607:+_chrX:148977933|148978004:+_chrX:148978362|148978455:+_chrX:148980738|148980790:+_chrX:148987367|148987557:+_chrX:148991211|149000637:+","UN_RPL7L1P11_UP_LS0005","RPL7L1P11","pseudogene","no",2.83,0,0,0.021,201,0,0,"0(0)","ESCA;LUSC;OV;THYM","no","NA","NA","NA","NA"]
["chrX:149379280|149400539:-","chrX:149364326|149364593:-_chrX:149366380|149366517:-_chrX:149376059|149376112:-_chrX:149378933|149379033:-_chrX:149379129|149379280:-_chrX:149400539|149400603:-_chrX:149436075|149436259:-","UN_RN7SKP267_UP_LS0014","RN7SKP267","small non-coding RNA gene","no",2.13,0,0,0.009,83,0,0,"0(0)","LUSC","no","TE_intersect_:149400200|chrX|149400200|149401512|L1PB1:L1:LINE|80|+","NA","NA","NA"]
["chrX:151561954|151563732:+","chrX:151561430|151561954:+_chrX:151563732|151563839:+_chrX:151601527|151601581:+_chrX:151604646|151604734:+_chrX:151611664|151611753:+_chrX:151620930|151621029:+_chrX:151621482|151621592:+_chrX:151622937|151623064:+_chrX:151625448|151625530:+_chrX:151648615|151648702:+_chrX:151659713|151659836:+_chrX:151664119|151664348:+_chrX:151671038|151671196:+_chrX:151671573|151671779:+_chrX:151672183|151672661:+_chrX:151673928|151674186:+_chrX:151675997|151676515:+","UN_AF274854.1_UP_LS0001","AF274854.1","pseudogene","no",2.68,0,0,0.002,17,0,0,"0(0)","TGCT","no","TE_intersect_:151561758|chrX|151561758|151563344|LTR12C:ERV1:LTR|75|-","NA","NA","exon_intersect_chrX:151563622|151563839"]
["chrX:152171423|152189730:-","chrX:152166375|152168563:-_chrX:152171362|152171423:-_chrX:152189730|152189941:-_chrX:152197633|152197785:-_chrX:152208001|152208144:-_chrX:152224763|152224845:-_chrX:152255778|152255998:-","UN_GABRA3_LS0004","GABRA3","protein coding gene","no",2.17,0,0,0.016,157,0,0,"0(0)","ESCA;LUSC;TGCT","no","NA","NA","exon_intersect_chrX:152189730|152189943","intron_intersect_chrX:152168563|152186808"]
["chrX:152638711|152639660:-","chrX:152574683|152574980:-_chrX:152635882|152635987:-_chrX:152638569|152638711:-_chrX:152639660|152639794:-_chrX:152641241|152641295:-_chrX:152697595|152697653:-_chrX:152698631|152698708:-","UN_GABRQ_LS0002","GABRQ","protein coding gene","no",2.56,0,0,0.025,239,0,0,"0(0)","BLCA;ESCA;LUAD;LUSC;SKCM;STAD","no","NA","NA","intron_intersect_chrX:152638351|152640378","intron_intersect_chrX:152638351|152640378"]
["chrX:152740703|152759935:-","chrX:152727484|152727863:-_chrX:152728023|152728224:-_chrX:152732445|152732504:-_chrX:152733668|152733699:-_chrX:152740666|152740703:-_chrX:152759935|152760182:-","UN_CSAG1_UP_LS0005","CSAG1","protein coding gene","no",4.98,0,0,0.005,44,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chrX:152759843|152760222","exon_intersect_chrX:152740612|152740985"]
["chrX:153464897|153464988:-","chrX:153447749|153447909:-_chrX:153454394|153454508:-_chrX:153455542|153455766:-_chrX:153456265|153456364:-_chrX:153456493|153456651:-_chrX:153457137|153457228:-_chrX:153462610|153462671:-_chrX:153463036|153463101:-_chrX:153464586|153464897:-_chrX:153464988|153465055:-_chrX:153469146|153469261:-_chrX:153470450|153470553:-","UN_HAUS7_LS0014","HAUS7","protein coding gene","no",3.58,0,0,0.002,16,0,0,"0(0)","MESO","no","NA","NA","exon_intersect_chrX:153464988|153465055","intron_intersect_chrX:153462671|153464988"]
["chrX:153644045|153647919:+","chrX:153644006|153644045:+_chrX:153647919|153648326:+_chrX:153649232|153649687:+_chrX:153649980|153651319:+","UN_DUSP9_LS0006","DUSP9","protein coding gene","yes",0.76,0,0,0.011,108,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chrX:153642611|153647196","exon_intersect_chrX:153647919|153648326"]
["chrX:153806840|153807122:-","chrX:153802168|153804900:-_chrX:153805097|153805207:-_chrX:153805505|153805606:-_chrX:153806071|153806133:-_chrX:153806742|153806840:-_chrX:153807122|153807369:-_chrX:153808342|153808595:-_chrX:153830239|153830364:-","UN_PDZD4_LS0008","PDZD4","protein coding gene","no",3.25,0,0,0.004,40,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chrX:153806840|153807279","intron_intersect_chrX:153806840|153807279"]
["chrX:154156040|154156294:+","chrX:154156000|154156040:+_chrX:154156294|154156533:+_chrX:154158816|154159029:+","UN_OPN1LW_LS0001","OPN1LW","protein coding gene","no",1.18,0,0,0.006,55,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chrX:154154739|154156294","exon_intersect_chrX:154156294|154156533"]
["chrX:154304936|154305304:+","chrX:154304801|154304936:+_chrX:154305304|154305421:+_chrX:154309345|154309442:+_chrX:154310836|154311027:+_chrX:154311111|154311238:+_chrX:154312580|154312773:+_chrX:154315173|154315337:+_chrX:154320757|154320913:+_chrX:154323207|154323337:+_chrX:154325339|154325422:+_chrX:154327591|154327687:+_chrX:154327839|154327958:+_chrX:154329516|154330350:+","UN_TKTL1_LS0001","TKTL1","protein coding gene","yes",2.59,0,0,0.004,39,0,0,"0(0)","GBM;LGG","no","NA","NA","exon_intersect_chrX:154304923|154305421","exon_intersect_chrX:154304923|154305421"]
["chrX:15456054|15479729:-","chrX:15384799|15385116:-_chrX:15390185|15390251:-_chrX:15397449|15397531:-_chrX:15407506|15407550:-_chrX:15425906|15425990:-_chrX:15455848|15456054:-_chrX:15479729|15479821:-_chrX:15491162|15491309:-_chrX:15493156|15493341:-","UN_PIR_LS0008","PIR","protein coding gene","yes",5.21,0.22,0,0.019,179,0.006,4,"0(0)","UVM","no","NA","NA","exon_intersect_chrX:15479729|15479821","intron_intersect_chrX:15456054|15459657"]
["chrX:155119555|155147660:-","chrX:155061628|155061991:-_chrX:155063966|155064033:-_chrX:155119393|155119555:-_chrX:155147660|155147775:-","UN_MTCP1_LS0025","MTCP1","protein coding gene","yes",2.08,0,0,0.004,36,0,0,"0(0)","KIRC","no","NA","NA","exon_intersect_chrX:155147660|155147937","intron_intersect_chrX:155116754|155119996"]
["chrX:16159695|16167207:-","chrX:16152770|16152882:-_chrX:16153020|16153463:-_chrX:16154598|16154680:-_chrX:16157753|16157859:-_chrX:16159653|16159695:-_chrX:16167207|16167342:-_chrX:16168681|16168893:-_chrX:16170616|16170843:-","UN_AC078993.1_LS0001","AC078993.1","lncRNA gene","no",9.9,0,0,0.034,322,0,0,"0(0)","COAD;READ;TGCT;UCS","no","NA","TE_intersect_:16159645|chrX|16159645|16159973|L1ME4b:L1:LINE|251|-","exon_intersect_chrX:16167207|16167342","intron_intersect_chrX:16159672|16167207"]
["chrX:17138961|17141445:+","chrX:17036441|17036637:+_chrX:17047347|17047482:+_chrX:17052382|17052445:+_chrX:17054808|17054950:+_chrX:17062438|17062532:+_chrX:17068405|17068471:+_chrX:17069940|17069993:+_chrX:17074114|17074159:+_chrX:17077271|17077407:+_chrX:17103718|17103779:+_chrX:17133824|17133907:+_chrX:17135261|17135406:+_chrX:17138856|17138961:+_chrX:17141445|17141558:+_chrX:17147413|17153338:+","UN_REPS2_LS0066","REPS2","protein coding gene","no",3.6,0,0,0.004,39,0,0,"0(0)","STAD","no","NA","TE_intersect_:17141064|chrX|17141064|17141823|L1ME2z:L1:LINE|186|-","intron_intersect_chrX:17138961|17147413","intron_intersect_chrX:17138961|17147413"]
["chrX:18887625|18890118:+","chrX:18886923|18887123:+_chrX:18887523|18887625:+_chrX:18890118|18890628:+_chrX:18891296|18891414:+_chrX:18892227|18892296:+_chrX:18892765|18893338:+_chrX:18894147|18894497:+","UN_PHKA2-AS1_UP_LS0009","PHKA2-AS1","lncRNA gene","no",5.42,0,0,0.008,74,0,0,"0(0)","ACC;SKCM","no","NA","NA","NA","NA"]
["chrX:20790858|20802873:+","chrX:20790429|20790669:+_chrX:20790778|20790858:+_chrX:20802873|20802969:+_chrX:20803575|20803813:+","UN_AL807742.1_LS0003","AL807742.1","lncRNA gene","no",2.96,0,0,0.001,13,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chrX:23705858|23706619:-","chrX:23699705|23703982:-_chrX:23704694|23704844:-_chrX:23704993|23705080:-_chrX:23705509|23705594:-_chrX:23705768|23705858:-_chrX:23706619|23706739:-_chrX:23707877|23707944:-_chrX:23713135|23713208:-_chrX:23721881|23721984:-_chrX:23722670|23722742:-","UN_ACOT9_LS0009","ACOT9","protein coding gene","no",2.6,0,0,0.004,37,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrX:23705858|23706628","intron_intersect_chrX:23705858|23706628"]
["chrX:2631877|2631963:+","chrX:2610098|2611038:+_chrX:2612150|2612218:+_chrX:2615816|2615969:+_chrX:2618740|2618784:+_chrX:2619429|2619497:+_chrX:2623385|2623453:+_chrX:2626597|2631877:+_chrX:2631963|2657229:+","UN_CD99P1_LS0024","CD99P1","pseudogene","no",40.01,0,0,0.003,33,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrX:2626642|2637974","intron_intersect_chrX:2626642|2637974"]
["chrX:27336493|27393542:-","chrX:27205936|27206710:-_chrX:27336410|27336493:-_chrX:27393542|27393632:-_chrX:27394980|27395029:-_chrX:27398751|27398837:-_chrX:27398937|27398989:-","UN_AC107419.1_LS0017","AC107419.1","lncRNA gene","no",2.27,0,0,0.007,70,0,0,"0(0)","ACC;THYM","no","TE_intersect_:27393306|chrX|27393306|27393771|L1MEg:L1:LINE|293|+","TE_intersect_:27336389|chrX|27336389|27336594|L1M4a2:L1:LINE|251|+","exon_intersect_chrX:27393542|27393632","intron_intersect_chrX:27336493|27350024"]
["chrX:29606273|29614598:-","chrX:29594601|29601131:-_chrX:29606202|29606273:-_chrX:29614598|29614654:-_chrX:29659941|29660081:-","UN_IL1RAPL1_LS0043","IL1RAPL1","protein coding gene","no",9.04,0,0,0.007,64,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chrX:29574358|29668430","intron_intersect_chrX:29574358|29668430"]
["chrX:31048056|31049807:+","chrX:31014844|31015108:+_chrX:31047851|31048056:+_chrX:31049807|31051425:+","UN_RNU6-894P_UP_LS0005","RNU6-894P","small non-coding RNA gene","no",2.5,0,0,0.004,36,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:31777653|31783265:+","chrX:31777269|31777653:+_chrX:31783265|31783323:+_chrX:31787826|31787899:+_chrX:31795454|31795601:+_chrX:31796921|31797046:+","UN_DMD_LS0051","DMD","protein coding gene","yes",5.6,0,0,0.007,67,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:31774192|31819975","intron_intersect_chrX:31774192|31819975"]
["chrX:32804449|32809493:-","chrX:32800687|32804449:-_chrX:32809493|32809611:-_chrX:32816468|32816640:-_chrX:32823295|32823387:-_chrX:32844783|32844860:-_chrX:32849728|32849820:-_chrX:33020139|33020200:-_chrX:33078186|33078347:-_chrX:33083094|33083194:-","UN_DMD_LS0104","DMD","protein coding gene","yes",1.43,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","TE_intersect_:32804177|chrX|32804177|32807348|L1P2:L1:LINE|110|+","exon_intersect_chrX:32809493|32809611","intron_intersect_chrX:32756400|32809493"]
["chrX:3451890|3520317:-","chrX:3450350|3451890:-_chrX:3520317|3520608:-","UN_MXRA5_UP_LS0005","MXRA5","protein coding gene","no",3.5,0,0,0.015,142,0,0,"0(0)","MESO;OV;SARC","no","TE_intersect_:3520205|chrX|3520205|3520336|MLT1D:ERVL-MaLR:LTR|308|-","NA","NA","NA"]
["chrX:37460583|37460714:-","chrX:37454917|37455107:-_chrX:37458955|37460583:-_chrX:37460714|37460948:-_chrX:37462478|37462677:-","UN_AF241726.2_LS0028","AF241726.2","protein coding gene","no",2.49,0,0,0.004,35,0,0,"0(0)","ESCA","no","TE_intersect_:37458429|chrX|37458429|37460859|HERVH-int:ERV1:LTR|133|-","TE_intersect_:37458429|chrX|37458429|37460859|HERVH-int:ERV1:LTR|133|-","intron_intersect_chrX:37457295|37492021","intron_intersect_chrX:37457295|37492021"]
["chrX:39951241|39954763:-","chrX:39950732|39951241:-_chrX:39954763|39954940:-","UN_AL592164.1_UP_LS0009","AL592164.1","lncRNA gene","no",3.7,0,0,0.009,83,0,0,"0(0)","STAD","no","NA","TE_intersect_:39951231|chrX|39951231|39951293|MLT1F:ERVL-MaLR:LTR|213|-","NA","NA"]
["chrX:41612569|41615658:+","chrX:41611613|41612569:+_chrX:41615658|41615775:+_chrX:41621431|41621671:+_chrX:41647532|41648547:+","UN_CASK_LS0013","CASK","protein coding gene","no",3.26,0,0,0.003,26,0,0,"0(0)","TGCT","no","TE_intersect_:41611664|chrX|41611664|41613648|SVA_D:SVA:Retroposon|20|+","TE_intersect_:41615630|chrX|41615630|41615926|AluSz6:Alu:SINE|105|-","intron_intersect_chrX:41610025|41622617","intron_intersect_chrX:41610025|41622617"]
["chrX:43395394|43438335:+","chrX:43279544|43279646:+_chrX:43279841|43279882:+_chrX:43288155|43288251:+_chrX:43395285|43395394:+_chrX:43438335|43438660:+","UN_AL023574.1_LS0005","AL023574.1","lncRNA gene","no",6.08,0,0,0.004,43,0,0,"0(0)","TGCT","no","TE_intersect_:43394532|chrX|43394532|43396111|THE1B-int:ERVL-MaLR:LTR|86|-","NA","NA","NA"]
["chrX:44310747|44312568:-","chrX:44307333|44310747:-_chrX:44312568|44312756:-_chrX:44343547|44343682:-","UN_EFHC2_LS0022","EFHC2","protein coding gene","no",1.3,0,0,0.003,28,0,0,"0(0)","STAD","no","NA","NA","exon_intersect_chrX:44312568|44312756","intron_intersect_chrX:44310476|44312568"]
["chrX:46545627|46597760:+","chrX:46545511|46545627:+_chrX:46597760|46599255:+","UN_RP2_UP_LS0001","RP2","protein coding gene","no",2.23,0,0,0.006,61,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chrX:46545627|46546466","exon_intersect_chrX:46597760|46598408"]
["chrX:47285641|47291324:-","chrX:47285456|47285641:-_chrX:47291324|47291435:-_chrX:47293165|47293240:-","UN_RN7SL785P_UP_LS0002","RN7SL785P","small non-coding RNA gene","no",4.97,0,0,0.005,50,0,0,"0(0)","BLCA","no","TE_intersect_:47285908|chrX|47285908|47293583|HERVFH19-int:ERV1:LTR|92|-","TE_intersect_:47285348|chrX|47285348|47285905|LTR19B:ERV1:LTR|105|-","NA","NA"]
["chrX:47735962|47740568:+","chrX:47707256|47707385:+_chrX:47735834|47735962:+_chrX:47740568|47740996:+","UN_CXXC1P1_LS0006","CXXC1P1","pseudogene","no",5.18,0,0,0.013,125,0,0,"0(0)","ACC;PCPG","no","TE_intersect_:47735711|chrX|47735711|47736045|MLT1E1A-int:ERVL-MaLR:LTR|216|+","TE_intersect_:47740545|chrX|47740545|47740842|AluY:Alu:SINE|47|-","exon_intersect_chrX:47735834|47736628","intron_intersect_chrX:47736628|47752970"]
["chrX:48823089|48823255:-","chrX:48822922|48823089:-_chrX:48823255|48823348:-","UN_HDAC6_LS0017","HDAC6","protein coding gene","no",1.97,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:48822912|48823588","exon_intersect_chrX:48822912|48823588"]
["chrX:49142809|49145238:-","chrX:49113389|49113755:-_chrX:49113853|49113938:-_chrX:49115726|49115795:-_chrX:49115891|49116014:-_chrX:49116221|49116323:-_chrX:49117030|49117162:-_chrX:49117597|49117810:-_chrX:49119705|49119814:-_chrX:49122398|49122522:-_chrX:49122622|49122776:-_chrX:49123547|49123755:-_chrX:49124428|49124552:-_chrX:49141972|49142342:-_chrX:49142664|49142809:-_chrX:49145238|49145519:-_chrX:49148384|49149005:-","UN_GPKOW_UP_LS0027","GPKOW","protein coding gene","no",1.7,0,0,0.009,85,0,0,"0(0)","STAD","no","TE_intersect_:49144806|chrX|49144806|49148192|HERVE-int:ERV1:LTR|165|-","TE_intersect_:49139966|chrX|49139966|49144004|HERVE-int:ERV1:LTR|162|-","NA","NA"]
["chrX:50345872|50346652:+","chrX:50345305|50345872:+_chrX:50346652|50346807:+_chrX:50347626|50347775:+_chrX:50351241|50351371:+_chrX:50351607|50351716:+","UN_CCNB3_LS0013","CCNB3","protein coding gene","no",3.04,0,0,0.004,40,0,0,"0(0)","OV","no","TE_intersect_:50345767|chrX|50345767|50345877|MIR3:MIR:SINE|286|+","NA","intron_intersect_chrX:50342339|50346652","exon_intersect_chrX:50346652|50346807"]
["chrX:51280196|51280294:+","chrX:51280022|51280196:+_chrX:51280294|51280358:+","UN_NUDT10_UP_LS0001","NUDT10","protein coding gene","no",2.1,0,0,0.002,22,0,0,"0(0)","ESCA","no","TE_intersect_:51279255|chrX|51279255|51280864|SVA_D:SVA:Retroposon|33|+","TE_intersect_:51279255|chrX|51279255|51280864|SVA_D:SVA:Retroposon|33|+","NA","NA"]
["chrX:51396681|51638178:+","chrX:51396459|51396681:+_chrX:51638178|51638280:+","UN_CENPVL1_UP_LS0003","CENPVL1","protein coding gene","no",4.23,0,0,0.007,63,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chrX:51396681|51398116","NA"]
["chrX:51407809|51407876:+","chrX:51406958|51407809:+_chrX:51407876|51408843:+","UN_CXorf67_LS0003","CXorf67","protein coding gene","no",29.33,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:51406915|51408843","exon_intersect_chrX:51406915|51408843"]
["chrX:51638287|51639780:+","chrX:51638174|51638287:+_chrX:51639780|51639901:+_chrX:51641807|51642201:+","UN_CENPVL1_UP_LS0006","CENPVL1","protein coding gene","no",6.09,0,0,0.003,28,0,0,"0(0)","GBM","no","NA","TE_intersect_:51639747|chrX|51639747|51640056|AluSg:Alu:SINE|110|-","NA","NA"]
["chrX:51834426|51894269:+","chrX:51834386|51834426:+_chrX:51894269|51894349:+_chrX:51895053|51895760:+_chrX:51896409|51897077:+_chrX:51897208|51897271:+_chrX:51897547|51897626:+_chrX:51897795|51897886:+_chrX:51898114|51898193:+_chrX:51898285|51898327:+_chrX:51898581|51898643:+_chrX:51900182|51900296:+_chrX:51901553|51901938:+_chrX:51902146|51902354:+","UN_MAGED1_LS0018","MAGED1","protein coding gene","no",17.16,0,0,0.016,154,0,0,"0(0)","COAD;READ","no","TE_intersect_:51834144|chrX|51834144|51834533|LTR52:ERVL:LTR|193|+","NA","intron_intersect_chrX:51803117|51856968","exon_intersect_chrX:51894269|51894349"]
["chrX:51895668|51896491:-","chrX:51895317|51895381:-_chrX:51895487|51895668:-_chrX:51896491|51896647:-_chrX:51896712|51897084:-_chrX:51897825|51897887:-","UN_MAGED1_LS0060","MAGED1","protein coding gene","no",1.85,0,0,0.002,19,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:51896409|51897626","exon_intersect_chrX:51895053|51895760"]
["chrX:51896787|51896896:-","chrX:51896580|51896787:-_chrX:51896896|51897081:-","UN_MAGED1_LS0118","MAGED1","protein coding gene","no",5.8,0,0,0.008,81,0,0,"0(0)","OV;STAD","no","NA","NA","exon_intersect_chrX:51896409|51897626","exon_intersect_chrX:51896409|51897626"]
["chrX:51896805|51896965:-","chrX:51896706|51896805:-_chrX:51896965|51897078:-","UN_MAGED1_LS0125","MAGED1","protein coding gene","no",6.35,0.03,0,0.006,60,0.001,1,"0(0)","UCS","no","NA","NA","exon_intersect_chrX:51896409|51897626","exon_intersect_chrX:51896409|51897626"]
["chrX:52062476|52062507:+","chrX:52062233|52062476:+_chrX:52062507|52062667:+","UN_MAGED4B_LS0001","MAGED4B","protein coding gene","no",11.24,0,0,0.002,18,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chrX:52062222|52062664","exon_intersect_chrX:52062222|52062664"]
["chrX:52063668|52064047:-","chrX:52061827|52062038:-_chrX:52062234|52062664:-_chrX:52062987|52063101:-_chrX:52063523|52063668:-_chrX:52064047|52064109:-_chrX:52064501|52064543:-_chrX:52064629|52064708:-_chrX:52065330|52065421:-_chrX:52065810|52065889:-_chrX:52066083|52066146:-_chrX:52066250|52066657:-","UN_MAGED4B_LS0005","MAGED4B","protein coding gene","no",5.56,0,0,0.01,98,0,0,"0(0)","CHOL;MESO","no","NA","NA","exon_intersect_chrX:52062987|52064543","exon_intersect_chrX:52062987|52064543"]
["chrX:52121706|52148768:-","chrX:51625570|51625618:-_chrX:52121666|52121706:-_chrX:52148768|52148918:-","UN_MAGED4B_UP_LS0002","MAGED4B","protein coding gene","no",1.84,0,0,0.002,17,0,0,"0(0)","ESCA","no","TE_intersect_:52145326|chrX|52145326|52151280|L1PA4:L1:LINE|90|-","TE_intersect_:52119155|chrX|52119155|52125312|L1PA5:L1:LINE|71|+","NA","NA"]
["chrX:52190048|52190427:+","chrX:52184923|52184965:+_chrX:52185922|52186132:+_chrX:52186397|52187845:+_chrX:52187949|52188012:+_chrX:52188206|52188285:+_chrX:52188674|52188765:+_chrX:52189387|52189466:+_chrX:52189552|52189594:+_chrX:52189986|52190048:+_chrX:52190427|52190572:+_chrX:52190994|52191108:+_chrX:52191431|52191861:+_chrX:52192057|52192266:+","UN_MAGED4_LS0007","MAGED4","protein coding gene","no",6.7,0,0,0.014,134,0,0,"0(0)","BLCA;LUSC;MESO;UCS","no","NA","TE_intersect_:52190323|chrX|52190323|52190431|MIRc:MIR:SINE|257|-","exon_intersect_chrX:52189552|52191108","exon_intersect_chrX:52189552|52191108"]
["chrX:52191588|52191619:-","chrX:52190005|52190048:-_chrX:52190988|52191588:-_chrX:52191619|52191737:-","UN_MAGED4_LS0011","MAGED4","protein coding gene","no",13.65,0,0,0.002,17,0,0,"0(0)","GBM","no","NA","NA","exon_intersect_chrX:52191431|52191873","exon_intersect_chrX:52191431|52191873"]
["chrX:52199500|52216502:-","chrX:52191978|52193972:-_chrX:52194957|52198539:-_chrX:52199072|52199214:-_chrX:52199425|52199500:-_chrX:52216502|52216697:-","UN_MAGED4B_UP_LS0008","MAGED4B","protein coding gene","no",2.55,0,0,0.007,64,0,0,"0(0)","LGG","no","TE_intersect_:52216380|chrX|52216380|52219873|L1MA2:L1:LINE|153|+","TE_intersect_:52199390|chrX|52199390|52199503|HAL1:L1:LINE|310|-","NA","NA"]
["chrX:52368829|52369114:+","chrX:52368750|52368829:+_chrX:52369114|52369214:+_chrX:52370007|52370095:+_chrX:52370567|52370672:+_chrX:52372544|52372669:+_chrX:52375569|52375680:+","UN_AC231532.1_UP_LS0014","AC231532.1","pseudogene","no",1.82,0,0,0.005,50,0,0,"0(0)","OV;UCS","no","NA","NA","NA","exon_intersect_chrX:52369030|52369214"]
["chrX:52632895|52633358:+","chrX:52629042|52629144:+_chrX:52630271|52630407:+_chrX:52632791|52632895:+_chrX:52633358|52633995:+","UN_AL450023.1_UP_LS0001","AL450023.1","pseudogene","no",5.79,0,0,0.008,79,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chrX:52648396|52702581:-","chrX:52648358|52648396:-_chrX:52702581|52702630:-_chrX:52704497|52704592:-_chrX:52705128|52705242:-_chrX:52705681|52705769:-_chrX:52707112|52707211:-","UN_SSXP1_UP_LS0002","SSXP1","pseudogene","no",6.95,0,0,0.008,80,0,0,"0(0)","SKCM","no","NA","NA","exon_intersect_chrX:52702581|52702728","intron_intersect_chrX:52648396|52650353"]
["chrX:52698931|52699987:-","chrX:52696896|52697518:-_chrX:52697984|52698931:-_chrX:52699987|52700034:-_chrX:52700443|52700578:-_chrX:52702581|52702630:-_chrX:52704497|52704592:-_chrX:52705128|52705242:-_chrX:52705681|52705769:-_chrX:52707112|52707161:-","UN_SSX2_LS0002","SSX2","protein coding gene","yes",6.4,0,0,0.011,102,0,0,"0(0)","LIHC","no","TE_intersect_:52699580|chrX|52699580|52700037|Tigger1:TcMar-Tigger:DNA|129|+","TE_intersect_:52698794|chrX|52698794|52699587|Tigger1:TcMar-Tigger:DNA|121|+","intron_intersect_chrX:52698931|52700443","intron_intersect_chrX:52698931|52700443"]
["chrX:52700034|52700443:-","chrX:52696896|52697518:-_chrX:52697984|52698931:-_chrX:52699987|52700034:-_chrX:52700443|52700578:-_chrX:52702581|52702630:-_chrX:52704497|52704592:-_chrX:52705128|52705242:-_chrX:52705681|52705769:-_chrX:52707112|52707161:-","UN_SSX2_LS0004","SSX2","protein coding gene","yes",7.3,0,0,0.012,116,0,0,"0(0)","LIHC","no","NA","TE_intersect_:52699580|chrX|52699580|52700037|Tigger1:TcMar-Tigger:DNA|129|+","exon_intersect_chrX:52700443|52700578","intron_intersect_chrX:52698931|52700443"]
["chrX:52757989|52758398:+","chrX:52751269|52751318:+_chrX:52752661|52752749:+_chrX:52753188|52753302:+_chrX:52753838|52753933:+_chrX:52755800|52755849:+_chrX:52757854|52757989:+_chrX:52758398|52758445:+_chrX:52759501|52759646:+_chrX:52760344|52760448:+_chrX:52760914|52761325:+","UN_SSX2B_LS0002","SSX2B","protein coding gene","yes",9.67,0,0,0.013,120,0,0,"0(0)","LIHC","no","NA","TE_intersect_:52758394|chrX|52758394|52758851|Tigger1:TcMar-Tigger:DNA|129|-","intron_intersect_chrX:52757989|52759501","intron_intersect_chrX:52757989|52759501"]
["chrX:52757989|52759501:+","chrX:52751269|52751318:+_chrX:52752661|52752749:+_chrX:52753188|52753302:+_chrX:52753838|52753933:+_chrX:52755800|52755849:+_chrX:52757854|52757989:+_chrX:52759501|52759646:+_chrX:52760344|52760448:+_chrX:52760914|52761536:+","SSX2B_LS009","SSX2B","protein coding gene","yes",1.51,0,0,0.035,335,0.001,1,"0(0)","LIHC;STAD;UCS","yes","NA","TE_intersect_:52758844|chrX|52758844|52759637|Tigger1:TcMar-Tigger:DNA|121|-","intron_intersect_chrX:52757989|52759501","exon_intersect_chrX:52759501|52759646"]
["chrX:52759646|52760344:+","chrX:52751269|52751318:+_chrX:52752661|52752749:+_chrX:52753188|52753302:+_chrX:52753838|52753933:+_chrX:52755800|52755849:+_chrX:52757854|52757989:+_chrX:52759501|52759646:+_chrX:52760344|52760448:+_chrX:52760914|52761536:+","SSX2B_LS012","SSX2B","protein coding gene","yes",3.14,0,0.62,0.035,339,0.001,1,"0(4)","UCS","yes","TE_intersect_:52759637|chrX|52759637|52759842|L1MA2:L1:LINE|74|+","NA","intron_intersect_chrX:52759646|52760344","exon_intersect_chrX:52760344|52760448"]
["chrX:52811376|52811548:+","chrX:52811289|52811376:+_chrX:52811548|52811719:+_chrX:52812559|52812638:+_chrX:52813140|52813245:+_chrX:52815092|52815217:+_chrX:52818191|52818304:+","UN_XAGE5_UP_LS0003","XAGE5","protein coding gene","no",7.08,0,0,0.01,97,0,0,"0(0)","LIHC;UCS","no","NA","NA","NA","NA"]
["chrX:52811412|52811548:+","chrX:52811260|52811412:+_chrX:52811548|52811719:+_chrX:52812559|52812638:+_chrX:52813140|52813245:+_chrX:52815092|52815217:+_chrX:52818191|52818304:+","UN_XAGE5_UP_LS0005","XAGE5","protein coding gene","no",11.15,0,0,0.015,143,0,0,"0(0)","LIHC;UCS","no","NA","NA","NA","NA"]
["chrX:52811719|52812559:+","chrX:52811289|52811376:+_chrX:52811548|52811719:+_chrX:52812559|52812638:+_chrX:52813140|52813245:+_chrX:52815092|52815217:+_chrX:52818191|52818304:+","UN_FAM156B_UP_LS0001","FAM156B","protein coding gene","no",13.15,0,0,0.017,167,0,0,"0(0)","LIHC;UCS","no","NA","NA","NA","exon_intersect_chrX:52812204|52812638"]
["chrX:52926617|52942213:-","chrX:52926346|52926617:-_chrX:52942213|52942467:-","UN_FAM156A_LS0003","FAM156A","protein coding gene","no",6.01,0,0,0.001,11,0,0,"0(0)","ACC","no","NA","NA","intron_intersect_chrX:52927765|52946595","exon_intersect_chrX:52926402|52927765"]
["chrX:52927239|52929002:+","chrX:52926989|52927239:+_chrX:52929002|52930588:+","UN_FAM156A_LS0004","FAM156A","protein coding gene","no",1.74,0,0,0.007,64,0,0,"0(0)","ACC;OV","no","NA","NA","exon_intersect_chrX:52926402|52927765","intron_intersect_chrX:52927765|52946595"]
["chrX:52956346|53005192:-","chrX:52955155|52955246:-_chrX:52956273|52956346:-_chrX:53005192|53005444:-","UN_XAGE3_UP_LS0002","XAGE3","protein coding gene","no",2.19,0,0,0.003,32,0,0,"0(0)","SKCM","no","TE_intersect_:53004661|chrX|53004661|53005260|L1MEc:L1:LINE|249|+","NA","NA","exon_intersect_chrX:52956273|52958518"]
["chrX:53071068|53071157:+","chrX:53049283|53049484:+_chrX:53070988|53071068:+_chrX:53071157|53071367:+_chrX:53076525|53080615:+","UN_GPR173_LS0007","GPR173","protein coding gene","no",1.15,0,0,0.005,44,0,0,"0(0)","LGG","no","TE_intersect_:53070969|chrX|53070969|53071274|AluSp:Alu:SINE|85|-","TE_intersect_:53070969|chrX|53070969|53071274|AluSp:Alu:SINE|85|-","exon_intersect_chrX:53070988|53071110","intron_intersect_chrX:53071110|53076525"]
["chrX:53071367|53076525:+","chrX:53049283|53049484:+_chrX:53070988|53071367:+_chrX:53076525|53080615:+","UN_GPR173_LS0013","GPR173","protein coding gene","no",3.03,0,0,0.039,378,0,0,"0(0)","GBM;LGG;OV","no","TE_intersect_:53071274|chrX|53071274|53071735|MER20B:hAT-Charlie:DNA|262|-","NA","intron_intersect_chrX:53071110|53076525","exon_intersect_chrX:53076525|53080615"]
["chrX:53072748|53076525:+","chrX:53049283|53049484:+_chrX:53070988|53071472:+_chrX:53072293|53072748:+_chrX:53076525|53080615:+","UN_GPR173_LS0016","GPR173","protein coding gene","no",3.57,0,0,0.011,104,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chrX:53071110|53076525","exon_intersect_chrX:53076525|53080615"]
["chrX:53192837|53196703:+","chrX:53192669|53192837:+_chrX:53196703|53196855:+","UN_KDM5C_LS0024","KDM5C","protein coding gene","no",1.26,0,0,0.003,26,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chrX:53191321|53193332","exon_intersect_chrX:53196686|53197044"]
["chrX:53192845|53193001:+","chrX:53192704|53192845:+_chrX:53193001|53193130:+","UN_KDM5C_LS0028","KDM5C","protein coding gene","no",1.14,0,0,0.005,48,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chrX:53191321|53193332","exon_intersect_chrX:53191321|53193332"]
["chrX:53361709|53380620:-","chrX:53361525|53361709:-_chrX:53380620|53380730:-_chrX:53381018|53381087:-_chrX:53382232|53382383:-_chrX:53382506|53382660:-_chrX:53383097|53383253:-_chrX:53394778|53394888:-_chrX:53396227|53396380:-_chrX:53396472|53396617:-_chrX:53399589|53399730:-_chrX:53403566|53403672:-_chrX:53403777|53403893:-_chrX:53405012|53405149:-_chrX:53405245|53405391:-_chrX:53405493|53405672:-_chrX:53405771|53405956:-_chrX:53409062|53409269:-_chrX:53409421|53409503:-_chrX:53411761|53411901:-_chrX:53411995|53412253:-_chrX:53412900|53413138:-_chrX:53413232|53413435:-_chrX:53414758|53414870:-_chrX:53414981|53415169:-_chrX:53422492|53422669:-","UN_AC245102.2_UP_LS0004","AC245102.2","pseudogene","no",8.88,0,0,0.007,67,0,0,"0(0)","PCPG","no","NA","TE_intersect_:53361487|chrX|53361487|53361890|MLT1L:ERVL-MaLR:LTR|285|-","exon_intersect_chrX:53380620|53380730","NA"]
["chrX:53423402|53428003:+","chrX:53422941|53423138:+_chrX:53423314|53423402:+_chrX:53428003|53428084:+_chrX:53429854|53429972:+_chrX:53430396|53431115:+","UN_RIBC1_LS0005","RIBC1","protein coding gene","no",2.9,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chrX:53423402|53426277","exon_intersect_chrX:53428003|53428084"]
["chrX:53428084|53430396:+","chrX:53422941|53423138:+_chrX:53423314|53423402:+_chrX:53426277|53426393:+_chrX:53428003|53428084:+_chrX:53430396|53430790:+_chrX:53430907|53431115:+","UN_RIBC1_LS0008","RIBC1","protein coding gene","no",2.74,0,0,0.006,59,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chrX:53428084|53428283","exon_intersect_chrX:53430396|53431120"]
["chrX:53533411|53533891:-","chrX:53532742|53533411:-_chrX:53533891|53533938:-","UN_HUWE1_LS0022","HUWE1","protein coding gene","no",10.77,0,0,0.01,99,0,0,"0(0)","LIHC;TGCT","no","NA","NA","exon_intersect_chrX:53533542|53534197","intron_intersect_chrX:53533411|53533542"]
["chrX:53814238|53818877:+","chrX:53813949|53814238:+_chrX:53818877|53819048:+_chrX:53820838|53820977:+_chrX:53821081|53823906:+","UN_AC233279.1_UP_LS0001","AC233279.1","pseudogene","no",3.69,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:53813253|chrX|53813253|53814340|L1PA12:L1:LINE|241|-","TE_intersect_:53818537|chrX|53818537|53818935|MSTA:ERVL-MaLR:LTR|179|-","NA","NA"]
["chrX:53819048|53820838:+","chrX:53813949|53814238:+_chrX:53818877|53819048:+_chrX:53820838|53820977:+_chrX:53821081|53823906:+","UN_AC233279.1_UP_LS0002","AC233279.1","pseudogene","no",2.71,0,0,0.002,16,0,0,"0(0)","TGCT","no","TE_intersect_:53818935|chrX|53818935|53819061|HAL1:L1:LINE|200|+","NA","NA","NA"]
["chrX:54174142|54182500:-","chrX:54171439|54174142:-_chrX:54182500|54183281:-","UN_FAM120C_LS0021","FAM120C","protein coding gene","no",1.72,0,0,0.02,187,0,0,"0(0)","ESCA;OV;TGCT","no","NA","TE_intersect_:54173793|chrX|54173793|54174392|MLT1F2:ERVL-MaLR:LTR|138|-","exon_intersect_chrX:54182500|54183281","exon_intersect_chrX:54173789|54174146"]
["chrX:54175368|54182500:-","chrX:54173789|54175368:-_chrX:54182500|54182778:-","UN_FAM120C_LS0024","FAM120C","protein coding gene","no",1.67,0,0,0.004,40,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:54182500|54183281","intron_intersect_chrX:54174146|54182500"]
["chrX:54471487|54478907:-","chrX:54445454|54448967:-_chrX:54449143|54449268:-_chrX:54449659|54450301:-_chrX:54455448|54455527:-_chrX:54455692|54455784:-_chrX:54456220|54456366:-_chrX:54456509|54456567:-_chrX:54465451|54465589:-_chrX:54465696|54465852:-_chrX:54467784|54467932:-_chrX:54468787|54468876:-_chrX:54470016|54470457:-_chrX:54470583|54470760:-_chrX:54471314|54471487:-_chrX:54478907|54479058:-","UN_FGD1_LS0023","FGD1","protein coding gene","no",1.49,0,0,0.005,51,0,0,"0(0)","LGG","no","NA","NA","intron_intersect_chrX:54471487|54495126","intron_intersect_chrX:54471487|54495126"]
["chrX:5447295|5480715:-","chrX:5446751|5447295:-_chrX:5480715|5480935:-","UN_AC112656.1_UP_LS0003","AC112656.1","pseudogene","no",2.28,0,0,0.008,76,0,0,"0(0)","OV","no","TE_intersect_:5480456|chrX|5480456|5486466|L1PA2:L1:LINE|24|+","TE_intersect_:5446665|chrX|5446665|5447358|LTR62:ERVL:LTR|130|-","NA","NA"]
["chrX:54555094|54564816:-","chrX:54555064|54555094:-_chrX:54564816|54565285:-","UN_FGD1_UP_LS0006","FGD1","protein coding gene","no",5.05,0,0,0.01,96,0,0,"0(0)","GBM;OV;UCEC","no","TE_intersect_:54564723|chrX|54564723|54565034|AluSx1:Alu:SINE|125|-","TE_intersect_:54555001|chrX|54555001|54555313|AluSx:Alu:SINE|128|-","NA","intron_intersect_chrX:54554692|54558436"]
["chrX:54759927|54770308:-","chrX:54747070|54750106:-_chrX:54751003|54751380:-_chrX:54753651|54753764:-_chrX:54753930|54753965:-_chrX:54755017|54755109:-_chrX:54756965|54758998:-_chrX:54759756|54759927:-_chrX:54770308|54770395:-","UN_ITIH6_LS0011","ITIH6","protein coding gene","no",1.59,0,0,0.007,71,0,0,"0(0)","ESCA;OV","no","TE_intersect_:54765705|chrX|54765705|54770404|L1PA2:L1:LINE|29|-","NA","intron_intersect_chrX:54759927|54774081","intron_intersect_chrX:54759927|54774081"]
["chrX:54770145|54771404:+","chrX:54769943|54770145:+_chrX:54771404|54772554:+","UN_ITIH6_LS0015","ITIH6","protein coding gene","no",1.4,0,0,0.016,155,0,0,"0(0)","ESCA;LUSC;OV;THYM","no","TE_intersect_:54765705|chrX|54765705|54770404|L1PA2:L1:LINE|29|-","TE_intersect_:54770401|chrX|54770401|54771655|L1MCa:L1:LINE|189|-","intron_intersect_chrX:54759927|54774081","intron_intersect_chrX:54759927|54774081"]
["chrX:54814775|54815881:+","chrX:54812173|54812251:+_chrX:54812945|54813024:+_chrX:54813118|54813160:+_chrX:54813488|54813550:+_chrX:54814661|54814775:+_chrX:54815881|54816007:+","MAGED2_LS026","MAGED2","protein coding gene","no",14.7,0.28,0,0.005,44,0.001,1,"0(0)","UCEC","yes","NA","TE_intersect_:54815877|chrX|54815877|54816014|MER117:hAT-Charlie:DNA|248|-","intron_intersect_chrX:54814775|54815248","exon_intersect_chrX:54815248|54816012"]
["chrX:54815690|54815883:-","chrX:54815344|54815551:-_chrX:54815576|54815583:-_chrX:54815641|54815690:-_chrX:54815883|54816015:-","UN_MAGED2_LS0059","MAGED2","protein coding gene","no",41.62,0.26,0,0.007,63,0.001,1,"0(0)","UCS","no","TE_intersect_:54815877|chrX|54815877|54816014|MER117:hAT-Charlie:DNA|248|-","NA","exon_intersect_chrX:54815248|54816012","exon_intersect_chrX:54815248|54816012"]
["chrX:54930390|54930421:-","chrX:54930103|54930390:-_chrX:54930421|54930646:-","UN_TRO_LS0024","TRO","protein coding gene","no",5,0,0,0.003,31,0,0,"0(0)","UCS","no","NA","NA","exon_intersect_chrX:54928603|54931031","exon_intersect_chrX:54928603|54931031"]
["chrX:55007138|55007237:-","chrX:55006967|55007138:-_chrX:55007237|55007336:-","UN_APEX2_LS0037","APEX2","protein coding gene","no",1.21,0,0,0.003,30,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:55006518|55009057","exon_intersect_chrX:55006518|55009057"]
["chrX:55077524|55090013:+","chrX:55075071|55075114:+_chrX:55076034|55076125:+_chrX:55076569|55076677:+_chrX:55077399|55077524:+_chrX:55090013|55090104:+_chrX:55090502|55090610:+_chrX:55091332|55091457:+_chrX:55092715|55092842:+","UN_AL590240.3_UP_LS0004","AL590240.3","pseudogene","no",82.01,0,0,0.015,145,0,0,"0(0)","UCS","no","NA","NA","intron_intersect_chrX:55077524|55078782","exon_intersect_chrX:55090013|55090104"]
["chrX:55159228|55164015:-","chrX:55145893|55146311:-_chrX:55159129|55159228:-_chrX:55164015|55164157:-","UN_AL590240.4_UP_LS0002","AL590240.4","pseudogene","no",6.82,0,0,0.01,95,0,0,"0(0)","SKCM","no","TE_intersect_:55163565|chrX|55163565|55164086|MER41C:ERV1:LTR|103|+","NA","intron_intersect_chrX:55161310|55172717","intron_intersect_chrX:55159228|55160743"]
["chrX:55179058|55221375:+","chrX:55179039|55179058:+_chrX:55221375|55221463:+_chrX:55221767|55221875:+_chrX:55222621|55222746:+_chrX:55223987|55224106:+","UN_AL158819.1_UP_LS0004","AL158819.1","pseudogene","no",1.61,0,0,0.001,12,0,0,"0(0)","DLBC","no","NA","NA","intron_intersect_chrX:55178737|55179194","exon_intersect_chrX:55221375|55221463"]
["chrX:55222746|55288669:+","chrX:55220283|55220452:+_chrX:55221375|55221463:+_chrX:55221767|55221875:+_chrX:55222621|55222746:+_chrX:55288669|55288791:+","UN_MIR4536-2_UP_LS0001","MIR4536-2","small non-coding RNA gene","no",0.86,0,0,0.037,352,0.001,1,"0(0)","DLBC;SKCM;UCS","no","NA","NA","intron_intersect_chrX:55222746|55223987","exon_intersect_chrX:55288667|55288785"]
["chrX:55280094|55281863:+","chrX:55280043|55280094:+_chrX:55281863|55282011:+_chrX:55282720|55282845:+_chrX:55353218|55355341:+","UN_AL158819.1_LS0002","AL158819.1","pseudogene","no",4.29,0,0,0.008,74,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:55279890|55281371","exon_intersect_chrX:55281863|55281971"]
["chrX:55280152|55281374:+","chrX:55279976|55280152:+_chrX:55281374|55281465:+_chrX:55281863|55281971:+_chrX:55282720|55282845:+_chrX:55288669|55288785:+","UN_AL158819.1_LS0003","AL158819.1","pseudogene","no",4.96,0,0,0.012,115,0,0,"0(0)","SKCM;TGCT","no","NA","NA","intron_intersect_chrX:55279890|55281371","exon_intersect_chrX:55281371|55281465"]
["chrX:55282011|55282720:+","chrX:55280043|55280094:+_chrX:55281863|55282011:+_chrX:55282720|55282845:+_chrX:55353218|55355341:+","UN_AL158819.1_LS0006","AL158819.1","pseudogene","no",14.84,0,0,0.013,124,0,0,"0(0)","LIHC;UCS","no","NA","NA","intron_intersect_chrX:55281971|55282720","exon_intersect_chrX:55282720|55282845"]
["chrX:55282845|55353218:+","chrX:55280043|55280094:+_chrX:55281863|55282011:+_chrX:55282720|55282845:+_chrX:55353218|55355341:+","UN_MIR4536-2_UP_LS0005","MIR4536-2","small non-coding RNA gene","no",11.62,0,0,0.012,113,0,0,"0(0)","SKCM;TGCT","no","NA","NA","intron_intersect_chrX:55282845|55288667","NA"]
["chrX:55487987|55488694:-","chrX:55484517|55487987:-_chrX:55488694|55488988:-_chrX:55489169|55490448:-","UN_USP51_LS0002","USP51","protein coding gene","no",2.1,0,0,0.003,24,0,0,"0(0)","UVM","no","NA","NA","exon_intersect_chrX:55484616|55488988","exon_intersect_chrX:55484616|55488988"]
["chrX:55594182|55608203:+","chrX:55594033|55594182:+_chrX:55608203|55608261:+_chrX:55609421|55609480:+_chrX:55624406|55626215:+","UN_FOXR2_UP_LS0001","FOXR2","protein coding gene","no",5.56,0,0,0.008,75,0,0,"0(0)","SKCM;TGCT;UCS","no","NA","NA","NA","NA"]
["chrX:55608261|55609421:+","chrX:55608203|55608261:+_chrX:55609421|55609480:+_chrX:55624406|55626199:+","UN_FOXR2_UP_LS0003","FOXR2","protein coding gene","no",6.99,0,0,0.008,75,0,0,"0(0)","SKCM;TGCT;UCS","no","NA","NA","NA","NA"]
["chrX:55609480|55623169:+","chrX:55594037|55594182:+_chrX:55608203|55608261:+_chrX:55609421|55609480:+_chrX:55623169|55626195:+","UN_FOXR2_UP_LS0005","FOXR2","protein coding gene","no",4.72,0,0,0.004,41,0,0,"0(0)","TGCT","no","NA","TE_intersect_:55623107|chrX|55623107|55623241|MIRc:MIR:SINE|255|+","NA","NA"]
["chrX:55609480|55637785:+","chrX:55594032|55594182:+_chrX:55608203|55608261:+_chrX:55609421|55609480:+_chrX:55637785|55638918:+","UN_RRAGB_UP_LS0003","RRAGB","protein coding gene","no",2.38,0,0,0.002,17,0,0,"0(0)","UCS","no","NA","TE_intersect_:55636912|chrX|55636912|55638095|MER52A:ERV1:LTR|215|+","NA","NA"]
["chrX:55657022|55657890:-","chrX:55654721|55654834:-_chrX:55656378|55656441:-_chrX:55656934|55657022:-_chrX:55657890|55657996:-","UN_AL159987.1_UP_LS0001","AL159987.1","pseudogene","no",11.1,0,0,0.01,97,0,0,"0(0)","OV;SKCM;UCS","no","NA","NA","NA","NA"]
["chrX:55751196|55752227:+","chrX:55731401|55731586:+_chrX:55751101|55751196:+_chrX:55752227|55752401:+_chrX:55753392|55753514:+_chrX:55755068|55755206:+_chrX:55755841|55755932:+_chrX:55757216|55757331:+_chrX:55758246|55758774:+","UN_RRAGB_LS0020","RRAGB","protein coding gene","no",0.91,0,0,0.012,115,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:55751101|55751623","intron_intersect_chrX:55751623|55753392"]
["chrX:55753514|55754836:+","chrX:55731401|55731586:+_chrX:55751101|55751196:+_chrX:55753392|55753514:+_chrX:55754836|55755932:+_chrX:55757216|55757331:+_chrX:55758246|55758774:+","UN_RRAGB_LS0026","RRAGB","protein coding gene","no",1.76,0,0,0.008,74,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrX:55753514|55755810","intron_intersect_chrX:55753514|55755810"]
["chrX:56027798|56028461:-","chrX:56024227|56026274:-_chrX:56026851|56027798:-_chrX:56028461|56028656:-_chrX:56031453|56031851:-","UN_AL159987.1_UP_LS0022","AL159987.1","pseudogene","no",6.55,0,0,0.014,133,0,0,"0(0)","OV;UCEC","no","TE_intersect_:56024953|chrX|56024953|56031717|HERVE_a-int:ERV1:LTR|132|-","TE_intersect_:56024953|chrX|56024953|56031717|HERVE_a-int:ERV1:LTR|132|-","NA","NA"]
["chrX:56028742|56031453:-","chrX:56023216|56027798:-_chrX:56028461|56028742:-_chrX:56031453|56031812:-","UN_AL159987.1_UP_LS0025","AL159987.1","pseudogene","no",3.85,0,0,0.01,96,0,0,"0(0)","UCEC","no","TE_intersect_:56024953|chrX|56024953|56031717|HERVE_a-int:ERV1:LTR|132|-","TE_intersect_:56024953|chrX|56024953|56031717|HERVE_a-int:ERV1:LTR|132|-","NA","NA"]
["chrX:56107614|56111288:+","chrX:56107374|56107614:+_chrX:56111288|56112438:+","UN_KLF8_UP_LS0020","KLF8","protein coding gene","yes",1.69,0,0,0.007,66,0,0,"0(0)","OV","no","TE_intersect_:56103030|chrX|56103030|56107860|L1P2:L1:LINE|75|-","TE_intersect_:56110232|chrX|56110232|56111402|L1M4:L1:LINE|222|-","NA","NA"]
["chrX:56135591|56189912:-","chrX:56116679|56135591:-_chrX:56189912|56190023:-","UN_AL159987.1_UP_LS0027","AL159987.1","pseudogene","no",1.52,0,0,0.005,45,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:56183880|chrX|56183880|56190030|L1PA3:L1:LINE|54|+","TE_intersect_:56129153|chrX|56129153|56135710|L1PA3:L1:LINE|109|+","NA","NA"]
["chrX:56613115|56737130:-","chrX:56613093|56613115:-_chrX:56737130|56737577:-","UN_RPL23AP83_UP_LS0006","RPL23AP83","pseudogene","no",0.51,0,0,0.004,38,0,0,"0(0)","OV","no","NA","TE_intersect_:56613096|chrX|56613096|56613168|L1PA11:L1:LINE|56|-","intron_intersect_chrX:56732199|56737242","NA"]
["chrX:57091183|57095232:-","chrX:57071848|57091183:-_chrX:57095232|57095538:-_chrX:57112749|57112782:-_chrX:57114340|57114467:-_chrX:57117835|57117977:-_chrX:57118572|57118765:-_chrX:57120405|57120590:-","UN_AL139397.2_UP_LS0002","AL139397.2","pseudogene","no",1.67,0,0,0.002,21,0,0,"0(0)","ESCA","no","TE_intersect_:57094341|chrX|57094341|57100758|L1PA7:L1:LINE|107|+","TE_intersect_:57091147|chrX|57091147|57091434|L1PREC2:L1:LINE|200|+","NA","NA"]
["chrX:57214569|57215666:+","chrX:57121662|57121967:+_chrX:57126885|57127058:+_chrX:57214448|57214569:+_chrX:57215666|57215768:+","UN_PPP1R11P2_UP_LS0017","PPP1R11P2","pseudogene","no",1.8,0,0,0.004,39,0,0,"0(0)","ESCA;OV","no","TE_intersect_:57214421|chrX|57214421|57214674|AluSx3:Alu:SINE|134|-","TE_intersect_:57214945|chrX|57214945|57215906|L1PA8:L1:LINE|116|+","NA","NA"]
["chrX:57884928|57888428:-","chrX:57884440|57884928:-_chrX:57888428|57888444:-","UN_NLRP2B_UP_LS0007","NLRP2B","protein coding gene","no",2.41,0,0,0.004,39,0,0,"0(0)","LGG","no","TE_intersect_:57888345|chrX|57888345|57888704|THE1C:ERVL-MaLR:LTR|153|-","TE_intersect_:57884765|chrX|57884765|57886346|MSTB-int:ERVL-MaLR:LTR|184|-","NA","NA"]
["chrX:590780|593544:+","chrX:585149|585338:+_chrX:589495|589838:+_chrX:590677|590780:+_chrX:593544|594726:+","UN_SHOX_UP_LS0042","SHOX","protein coding gene","no",6.84,0,0,0.002,15,0,0,"0(0)","MESO","no","NA","NA","NA","NA"]
["chrX:5936111|6029280:-","chrX:5935323|5936111:-_chrX:6029280|6029432:-_chrX:6150995|6151771:-_chrX:6186772|6187038:-","UN_NLGN4X_LS0004","NLGN4X","protein coding gene","no",3.71,0,0,0.009,83,0,0,"0(0)","TGCT;THYM","no","NA","NA","exon_intersect_chrX:6029280|6029432","intron_intersect_chrX:5909239|6029280"]
["chrX:63189208|63189615:-","chrX:63189061|63189208:-_chrX:63189615|63189772:-","UN_ZFRP1_UP_LS0003","ZFRP1","pseudogene","no",1.08,0,0,0.002,19,0,0,"0(0)","ESCA","no","TE_intersect_:63188610|chrX|63188610|63190309|SVA_F:SVA:Retroposon|72|-","TE_intersect_:63188610|chrX|63188610|63190309|SVA_F:SVA:Retroposon|72|-","NA","NA"]
["chrX:63351637|63399781:-","chrX:63347158|63351637:-_chrX:63399781|63399903:-_chrX:63432364|63432491:-_chrX:63443071|63443132:-_chrX:63560832|63561064:-","UN_LINC01278_LS0002","LINC01278","lncRNA gene","no",1.96,0,0,0.004,38,0,0,"0(0)","STAD","no","TE_intersect_:63399539|chrX|63399539|63399904|MER57-int:ERV1:LTR|145|-","NA","exon_intersect_chrX:63399404|63399903","intron_intersect_chrX:63351344|63351842"]
["chrX:63393143|63400843:+","chrX:63392204|63393143:+_chrX:63400843|63400927:+_chrX:63401229|63401755:+","UN_LINC01278_LS0006","LINC01278","lncRNA gene","no",3.88,0,0,0.011,109,0,0,"0(0)","ESCA;HNSC","no","TE_intersect_:63392395|chrX|63392395|63394169|SVA_D:SVA:Retroposon|27|+","TE_intersect_:63400809|chrX|63400809|63400932|MSTA1-int:ERVL-MaLR:LTR|267|-","intron_intersect_chrX:63352178|63399404","intron_intersect_chrX:63399903|63426559"]
["chrX:63398161|63399781:-","chrX:63397502|63398161:-_chrX:63399781|63399903:-_chrX:63432364|63432491:-_chrX:63516910|63517082:-_chrX:63560832|63560993:-","UN_LINC01278_LS0011","LINC01278","lncRNA gene","no",3.4,0,0,0.003,28,0,0,"0(0)","PCPG","no","TE_intersect_:63399539|chrX|63399539|63399904|MER57-int:ERV1:LTR|145|-","TE_intersect_:63397947|chrX|63397947|63399564|MER57-int:ERV1:LTR|117|-","exon_intersect_chrX:63399404|63399903","intron_intersect_chrX:63352178|63399404"]
["chrX:63724711|63809203:-","chrX:63637985|63638209:-_chrX:63643980|63644048:-_chrX:63655494|63655737:-_chrX:63665886|63666017:-_chrX:63674038|63674167:-_chrX:63678340|63678572:-_chrX:63697125|63697304:-_chrX:63706258|63706449:-_chrX:63724532|63724711:-_chrX:63809203|63809290:-","UN_ARHGEF9_LS0019","ARHGEF9","protein coding gene","no",3.88,0,0,0.003,25,0,0,"0(0)","PCPG","no","TE_intersect_:63809146|chrX|63809146|63809232|MIR1_Amn:MIR:SINE|326|-","NA","exon_intersect_chrX:63809203|63809274","intron_intersect_chrX:63724711|63724796"]
["chrX:63938435|64016236:+","chrX:63938332|63938435:+_chrX:64016236|64016335:+","UN_HNRNPDP1_UP_LS0002","HNRNPDP1","pseudogene","no",2.68,0,0,0.002,16,0,0,"0(0)","ESCA","no","TE_intersect_:63936587|chrX|63936587|63941434|L1PA3:L1:LINE|49|+","TE_intersect_:64013267|chrX|64013267|64019286|L1HS:L1:LINE|9|-","NA","NA"]
["chrX:64383009|64395340:-","chrX:64379823|64383009:-_chrX:64395340|64395431:-","UN_MTMR8_LS0009","MTMR8","protein coding gene","no",1.34,0,0,0.009,91,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chrX:64395340|64395431","intron_intersect_chrX:64359527|64395340"]
["chrX:64580328|64581100:+","chrX:64580188|64580328:+_chrX:64581100|64581192:+_chrX:64586196|64586507:+","UN_KRT8P27_UP_LS0001","KRT8P27","pseudogene","no",2.49,0,0,0.001,12,0,0,"0(0)","DLBC","no","TE_intersect_:64580285|chrX|64580285|64580766|LTR21A:ERV1:LTR|105|-","NA","NA","NA"]
["chrX:64580332|64581100:+","chrX:64580222|64580332:+_chrX:64581100|64581192:+_chrX:64586196|64586584:+","UN_KRT8P27_UP_LS0003","KRT8P27","pseudogene","no",8.44,0,0,0.005,52,0,0,"0(0)","DLBC;THYM","no","TE_intersect_:64580285|chrX|64580285|64580766|LTR21A:ERV1:LTR|105|-","NA","NA","NA"]
["chrX:64580404|64581100:+","chrX:64580190|64580404:+_chrX:64581100|64581192:+_chrX:64586196|64586508:+","UN_KRT8P27_UP_LS0004","KRT8P27","pseudogene","no",4.86,0,0,0.001,13,0,0,"0(0)","DLBC;THYM","no","TE_intersect_:64580285|chrX|64580285|64580766|LTR21A:ERV1:LTR|105|-","NA","NA","NA"]
["chrX:64580971|64581100:+","chrX:64580214|64580332:+_chrX:64580768|64580971:+_chrX:64581100|64581192:+_chrX:64586196|64586505:+","UN_KRT8P27_UP_LS0005","KRT8P27","pseudogene","no",5.77,0,0,0.002,16,0,0,"0(0)","DLBC","no","NA","NA","NA","NA"]
["chrX:64581192|64586196:+","chrX:64580214|64580332:+_chrX:64580768|64580971:+_chrX:64581100|64581192:+_chrX:64586196|64586505:+","UN_KRT8P27_UP_LS0006","KRT8P27","pseudogene","no",9.15,0,0,0.007,65,0,0,"0(0)","DLBC;THYM","no","NA","TE_intersect_:64586163|chrX|64586163|64586462|AluY:Alu:SINE|47|-","NA","NA"]
["chrX:6460614|6461598:-","chrX:6460236|6460614:-_chrX:6461598|6461748:-_chrX:6461844|6461970:-_chrX:6464681|6464823:-","UN_AC078991.1_UP_LS0002","AC078991.1","pseudogene","no",6.01,0,0,0.003,30,0,0,"0(0)","OV;THYM","no","TE_intersect_:6460989|chrX|6460989|6461756|LTR39:ERV1:LTR|157|+","NA","NA","NA"]
["chrX:6461748|6461844:-","chrX:6460236|6460614:-_chrX:6461598|6461748:-_chrX:6461844|6461970:-_chrX:6464681|6464823:-","UN_AC078991.1_UP_LS0003","AC078991.1","pseudogene","no",4.86,0,0,0.004,35,0,0,"0(0)","OV;THYM","no","TE_intersect_:6461756|chrX|6461756|6462090|MLT2F:ERVL:LTR|273|+","TE_intersect_:6460989|chrX|6460989|6461756|LTR39:ERV1:LTR|157|+","NA","NA"]
["chrX:6461970|6464681:-","chrX:6460236|6460614:-_chrX:6461598|6461748:-_chrX:6461844|6461970:-_chrX:6464681|6464823:-","UN_AC078991.1_UP_LS0005","AC078991.1","pseudogene","no",2.95,0,0,0.003,25,0,0,"0(0)","THYM","no","NA","TE_intersect_:6461756|chrX|6461756|6462090|MLT2F:ERVL:LTR|273|+","NA","NA"]
["chrX:64808294|64849851:-","chrX:64789980|64790638:-_chrX:64808178|64808294:-_chrX:64849851|64851050:-","UN_BLOC1S2P1_UP_LS0002","BLOC1S2P1","pseudogene","no",4.45,0,0,0.001,14,0,0,"0(0)","DLBC;THYM","no","TE_intersect_:64848897|chrX|64848897|64850686|HERVFH21-int:ERV1:LTR|293|+","TE_intersect_:64807303|chrX|64807303|64808409|L1PA10:L1:LINE|234|+","NA","NA"]
["chrX:64851153|64948002:+","chrX:64842796|64842834:+_chrX:64843054|64843148:+_chrX:64844891|64845057:+_chrX:64848355|64851153:+_chrX:64948002|64948070:+_chrX:64990142|64990556:+","UN_CCT4P2_UP_LS0014","CCT4P2","pseudogene","no",1.53,0,0,0.002,19,0,0,"0(0)","DLBC;THYM","no","TE_intersect_:64851090|chrX|64851090|64851336|L1PBa1:L1:LINE|142|-","TE_intersect_:64948000|chrX|64948000|64948600|MER57-int:ERV1:LTR|169|+","NA","intron_intersect_chrX:64922243|64976325"]
["chrX:65052103|65075474:+","chrX:65034834|65035269:+_chrX:65051462|65052103:+_chrX:65075474|65075670:+_chrX:65075844|65075912:+_chrX:65113664|65113842:+","UN_CCT4P2_UP_LS0019","CCT4P2","pseudogene","no",11.51,0,0,0.004,41,0,0,"0(0)","THYM","no","TE_intersect_:65051677|chrX|65051677|65052159|LTR8B:ERV1:LTR|254|-","TE_intersect_:65074047|chrX|65074047|65076107|L1M3d:L1:LINE|275|-","NA","NA"]
["chrX:6525929|6527644:-","chrX:6525581|6525929:-_chrX:6527644|6527944:-","UN_AC078991.1_UP_LS0006","AC078991.1","pseudogene","no",3.96,0,0,0.005,50,0,0,"0(0)","TGCT","no","TE_intersect_:6527561|chrX|6527561|6528113|MLT2A2:ERVL:LTR|171|-","TE_intersect_:6525809|chrX|6525809|6526127|AluJo:Alu:SINE|173|+","NA","NA"]
["chrX:6533828|6533859:-","chrX:6533617|6533828:-_chrX:6533859|6533888:-_chrX:6533949|6534203:-_chrX:6534396|6534597:-","UN_VCX3A_LS0006","VCX3A","protein coding gene","no",39.64,0,0,0.02,194,0,0,"0(0)","BLCA;SKCM","no","NA","NA","exon_intersect_chrX:6533618|6534203","exon_intersect_chrX:6533618|6534203"]
["chrX:6533858|6533889:-","chrX:6533618|6533858:-_chrX:6533889|6534203:-_chrX:6534396|6534561:-","UN_VCX3A_LS0007","VCX3A","protein coding gene","no",19.36,0,0,0.006,55,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:6533618|6534203","exon_intersect_chrX:6533618|6534203"]
["chrX:65523876|65524056:-","chrX:65512583|65512901:-_chrX:65514823|65514973:-_chrX:65517987|65518465:-_chrX:65523560|65523707:-_chrX:65523822|65523876:-_chrX:65524056|65524262:-_chrX:65524965|65525050:-_chrX:65528260|65529258:-_chrX:65529594|65529878:-_chrX:65531357|65531438:-_chrX:65532561|65532630:-_chrX:65533610|65533735:-_chrX:65534480|65534754:-","UN_LAS1L_LS0025","LAS1L","protein coding gene","no",3.89,0,0,0.003,33,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chrX:65524056|65524262","intron_intersect_chrX:65523707|65524056"]
["chrX:65620389|65624644:+","chrX:65620286|65620389:+_chrX:65624644|65624938:+","UN_MSN_LS0012","MSN","protein coding gene","no",1.75,0,0,0.012,112,0,0,"0(0)","ESCA","no","TE_intersect_:65614680|chrX|65614680|65620735|L1PA2:L1:LINE|29|-","TE_intersect_:65624377|chrX|65624377|65624664|L1MB4:L1:LINE|223|-","intron_intersect_chrX:65600750|65624644","exon_intersect_chrX:65624644|65625865"]
["chrX:65620474|65624644:+","chrX:65620305|65620474:+_chrX:65624644|65626820:+","UN_MSN_LS0013","MSN","protein coding gene","no",1.85,0,0,0.008,81,0,0,"0(0)","ESCA","no","TE_intersect_:65614680|chrX|65614680|65620735|L1PA2:L1:LINE|29|-","TE_intersect_:65624377|chrX|65624377|65624664|L1MB4:L1:LINE|223|-","intron_intersect_chrX:65600750|65624644","exon_intersect_chrX:65624644|65625865"]
["chrX:65741379|65741639:-","chrX:65740875|65741080:-_chrX:65741106|65741379:-_chrX:65741639|65741831:-","UN_MSN_LS0189","MSN","protein coding gene","no",5.66,0,0,0.002,21,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chrX:65739729|65741931","exon_intersect_chrX:65739729|65741931"]
["chrX:65741554|65741619:-","chrX:65741264|65741554:-_chrX:65741619|65741725:-","UN_MSN_LS0193","MSN","protein coding gene","no",14.94,0,0,0.008,73,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:65739729|65741931","exon_intersect_chrX:65739729|65741931"]
["chrX:66015551|66020127:+","chrX:66015461|66015551:+_chrX:66020127|66020422:+","UN_AL034397.3_LS0002","AL034397.3","lncRNA gene","no",8.33,0,0,0.002,23,0,0,"0(0)","LAML","no","NA","TE_intersect_:66019954|chrX|66019954|66020169|MER103C:hAT-Charlie:DNA|283|+","intron_intersect_chrX:66015551|66017065","exon_intersect_chrX:66018824|66020422"]
["chrX:66017189|66020127:+","chrX:66015461|66017189:+_chrX:66020127|66020422:+","UN_AL034397.3_LS0006","AL034397.3","lncRNA gene","no",6.99,0,0,0.002,22,0,0,"0(0)","LAML","no","TE_intersect_:66017169|chrX|66017169|66017345|MIRc:MIR:SINE|334|-","TE_intersect_:66019954|chrX|66019954|66020169|MER103C:hAT-Charlie:DNA|283|+","intron_intersect_chrX:66017189|66018824","exon_intersect_chrX:66018824|66020422"]
["chrX:6613571|6614008:-","chrX:6612281|6613571:-_chrX:6614008|6614862:-_chrX:6689489|6690049:-","UN_VCX3A_UP_LS0003","VCX3A","protein coding gene","no",2.61,0,0,0.021,204,0,0,"0(0)","CESC;ESCA;LUSC;OV;STAD;THYM","no","NA","NA","NA","NA"]
["chrX:66777587|66779165:+","chrX:66777375|66777587:+_chrX:66779165|66779728:+","UN_AL049641.1_UP_LS0006","AL049641.1","pseudogene","no",2.09,0,0,0.004,35,0,0,"0(0)","BLCA","no","TE_intersect_:66777175|chrX|66777175|66777664|MLT1D:ERVL-MaLR:LTR|207|+","TE_intersect_:66779135|chrX|66779135|66779290|L2:L2:LINE|379|-","NA","NA"]
["chrX:67055895|67060235:-","chrX:67055821|67055895:-_chrX:67060235|67060520:-","UN_RNU6-394P_UP_LS0011","RNU6-394P","small non-coding RNA gene","no",2.08,0,0,0.002,15,0,0,"0(0)","GBM","no","TE_intersect_:67060006|chrX|67060006|67066134|L1PA2:L1:LINE|62|-","TE_intersect_:67055667|chrX|67055667|67057381|L1PA4:L1:LINE|59|-","NA","NA"]
["chrX:6767711|6769353:-","chrX:6705824|6706466:-_chrX:6721417|6721544:-_chrX:6767507|6767711:-_chrX:6769353|6769668:-_chrX:6783321|6783502:-_chrX:6932244|6932882:-","UN_AC097347.1_UP_LS0004","AC097347.1","lncRNA gene","no",2.77,0,0,0.01,100,0,0,"0(0)","ESCA;STAD","no","NA","NA","NA","NA"]
["chrX:68829402|68840705:-","chrX:68829317|68829402:-_chrX:68840705|68840857:-_chrX:68840987|68841122:-","UN_EFNB1_LS0004","EFNB1","protein coding gene","no",1.24,0,0,0.002,19,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:68840242|68842147","exon_intersect_chrX:68828997|68829904"]
["chrX:68840740|68840987:-","chrX:68840403|68840740:-_chrX:68840987|68841006:-","UN_EFNB1_LS0035","EFNB1","protein coding gene","no",1.25,0,0,0.002,22,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chrX:68840242|68842147","exon_intersect_chrX:68840242|68842147"]
["chrX:68841504|68841915:-","chrX:68840850|68840986:-_chrX:68841353|68841504:-_chrX:68841915|68842046:-","UN_EFNB1_LS0070","EFNB1","protein coding gene","no",1.67,0,0,0.003,24,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chrX:68840242|68842147","exon_intersect_chrX:68840242|68842147"]
["chrX:69125367|69127452:+","chrX:69125082|69125367:+_chrX:69127452|69127620:+_chrX:69129607|69130657:+","UN_HMGN1P35_UP_LS0020","HMGN1P35","pseudogene","no",2.91,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chrX:69363388|69366516:+","chrX:69362026|69363388:+_chrX:69366516|69366623:+_chrX:69368764|69371309:+","UN_FAM155B_UP_LS0004","FAM155B","protein coding gene","no",5.81,0,0,0.004,36,0,0,"0(0)","SARC;UCS","no","NA","TE_intersect_:69366495|chrX|69366495|69366778|AluSc8:Alu:SINE|81|-","NA","NA"]
["chrX:70085466|70088702:+","chrX:70085313|70085466:+_chrX:70088702|70088824:+_chrX:70090584|70091072:+","UN_IGBP1_UP_LS0001","IGBP1","protein coding gene","no",3.82,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:70134816|70135795:+","chrX:70133947|70134135:+_chrX:70134523|70134816:+_chrX:70135795|70135911:+_chrX:70146633|70146828:+_chrX:70148761|70148840:+_chrX:70150210|70150322:+_chrX:70162346|70162464:+_chrX:70165833|70166324:+","UN_IGBP1_LS0010","IGBP1","protein coding gene","no",2.96,0,0,0.003,25,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:70134816|70146633","intron_intersect_chrX:70134816|70146633"]
["chrX:70135911|70146633:+","chrX:70133947|70134135:+_chrX:70134523|70134816:+_chrX:70135795|70135911:+_chrX:70146633|70146828:+_chrX:70148761|70148840:+_chrX:70150210|70150322:+_chrX:70162346|70162464:+_chrX:70165833|70166324:+","UN_IGBP1_LS0013","IGBP1","protein coding gene","no",7.04,0,0,0.003,29,0,0,"0(0)","TGCT","no","TE_intersect_:70135865|chrX|70135865|70136073|MIR:MIR:SINE|270|+","NA","intron_intersect_chrX:70134816|70146633","exon_intersect_chrX:70146633|70146828"]
["chrX:70150322|70165843:+","chrX:70133952|70134135:+_chrX:70134523|70134816:+_chrX:70146633|70146828:+_chrX:70148761|70148840:+_chrX:70150210|70150322:+_chrX:70165843|70166324:+","UN_IGBP1_LS0024","IGBP1","protein coding gene","no",37.43,0,0,0.002,21,0,0,"0(0)","CHOL","no","NA","NA","intron_intersect_chrX:70150322|70163842","exon_intersect_chrX:70165833|70166324"]
["chrX:70153870|70155940:-","chrX:70153580|70153870:-_chrX:70155940|70156004:-_chrX:70260169|70260228:-","UN_IGBP1_LS0025","IGBP1","protein coding gene","no",4.58,0,0,0.029,278,0,0,"0(0)","LIHC;TGCT;THCA","no","TE_intersect_:70155922|chrX|70155922|70156358|Tigger1:TcMar-Tigger:DNA|140|-","TE_intersect_:70153591|chrX|70153591|70154052|MLT1F2:ERVL-MaLR:LTR|249|-","intron_intersect_chrX:70150322|70163842","intron_intersect_chrX:70150322|70163842"]
["chrX:70153870|70252422:-","chrX:70153625|70153870:-_chrX:70252422|70252595:-","UN_IGBP1-AS2_UP_LS0005","IGBP1-AS2","lncRNA gene","no",3.73,0,0,0.015,145,0,0,"0(0)","TGCT;THCA","no","NA","TE_intersect_:70153591|chrX|70153591|70154052|MLT1F2:ERVL-MaLR:LTR|249|-","NA","intron_intersect_chrX:70150322|70163842"]
["chrX:70156004|70189500:-","chrX:70153580|70153870:-_chrX:70155940|70156004:-_chrX:70189500|70189557:-_chrX:70191803|70191877:-_chrX:70192104|70192250:-_chrX:70199685|70199846:-_chrX:70260169|70260228:-","UN_IGBP1-AS2_UP_LS0007","IGBP1-AS2","lncRNA gene","no",6.71,0,0,0.004,39,0,0,"0(0)","TGCT","no","TE_intersect_:70188403|chrX|70188403|70189592|L1MD:L1:LINE|186|+","TE_intersect_:70155922|chrX|70155922|70156358|Tigger1:TcMar-Tigger:DNA|140|-","intron_intersect_chrX:70177667|70199271","intron_intersect_chrX:70150322|70163842"]
["chrX:70156004|70191796:-","chrX:70153650|70153870:-_chrX:70155940|70156004:-_chrX:70191796|70191877:-_chrX:70252422|70252535:-","UN_IGBP1-AS2_UP_LS0008","IGBP1-AS2","lncRNA gene","no",4.39,0,0,0.005,46,0,0,"0(0)","TGCT","no","TE_intersect_:70190288|chrX|70190288|70191965|L1MA9:L1:LINE|251|+","TE_intersect_:70155922|chrX|70155922|70156358|Tigger1:TcMar-Tigger:DNA|140|-","intron_intersect_chrX:70177667|70199271","intron_intersect_chrX:70150322|70163842"]
["chrX:70156004|70252422:-","chrX:70153611|70153870:-_chrX:70155940|70156004:-_chrX:70252422|70252528:-","UN_IGBP1-AS2_UP_LS0013","IGBP1-AS2","lncRNA gene","no",4.6,0,0,0.015,144,0,0,"0(0)","TGCT;THCA","no","NA","TE_intersect_:70155922|chrX|70155922|70156358|Tigger1:TcMar-Tigger:DNA|140|-","NA","intron_intersect_chrX:70150322|70163842"]
["chrX:70189557|70191796:-","chrX:70153611|70153870:-_chrX:70155940|70156004:-_chrX:70189500|70189557:-_chrX:70191796|70191877:-_chrX:70252422|70252528:-","UN_DGAT2L6_LS0001","DGAT2L6","protein coding gene","no",4.13,0,0,0.003,32,0,0,"0(0)","TGCT","no","TE_intersect_:70190288|chrX|70190288|70191965|L1MA9:L1:LINE|251|+","TE_intersect_:70188403|chrX|70188403|70189592|L1MD:L1:LINE|186|+","intron_intersect_chrX:70177667|70199271","intron_intersect_chrX:70177667|70199271"]
["chrX:70191877|70192104:-","chrX:70153580|70153870:-_chrX:70155940|70156004:-_chrX:70189500|70189557:-_chrX:70191803|70191877:-_chrX:70192104|70192250:-_chrX:70199685|70199846:-_chrX:70260169|70260228:-","UN_DGAT2L6_LS0003","DGAT2L6","protein coding gene","no",2.35,0,0,0.003,24,0,0,"0(0)","TGCT","no","TE_intersect_:70191965|chrX|70191965|70192268|AluJr:Alu:SINE|175|+","TE_intersect_:70190288|chrX|70190288|70191965|L1MA9:L1:LINE|251|+","intron_intersect_chrX:70177667|70199271","intron_intersect_chrX:70177667|70199271"]
["chrX:70191877|70252422:-","chrX:70153611|70153870:-_chrX:70155940|70156004:-_chrX:70189500|70189557:-_chrX:70191796|70191877:-_chrX:70252422|70252528:-","UN_IGBP1-AS1_UP_LS0002","IGBP1-AS1","lncRNA gene","no",2.84,0,0,0.006,54,0,0,"0(0)","TGCT","no","NA","TE_intersect_:70190288|chrX|70190288|70191965|L1MA9:L1:LINE|251|+","NA","intron_intersect_chrX:70177667|70199271"]
["chrX:70199094|70199685:-","chrX:70153632|70153870:-_chrX:70155940|70156004:-_chrX:70198963|70199094:-_chrX:70199685|70199846:-_chrX:70260169|70260213:-","UN_DGAT2L6_LS0009","DGAT2L6","protein coding gene","no",2.35,0,0,0.005,49,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:70199381|70199812","intron_intersect_chrX:70177667|70199271"]
["chrX:70199846|70216444:-","chrX:70153632|70153870:-_chrX:70155940|70156004:-_chrX:70191796|70191877:-_chrX:70199685|70199846:-_chrX:70216444|70216553:-_chrX:70252422|70252617:-","UN_IGBP1-AS1_UP_LS0004","IGBP1-AS1","lncRNA gene","no",1.86,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:70210402|chrX|70210402|70216535|L1PA4:L1:LINE|43|-","NA","NA","exon_intersect_chrX:70199812|70199882"]
["chrX:70199846|70252422:-","chrX:70194683|70199094:-_chrX:70199685|70199846:-_chrX:70252422|70252537:-","UN_IGBP1-AS1_UP_LS0005","IGBP1-AS1","lncRNA gene","no",2,0,0,0.005,49,0,0,"0(0)","TGCT;THCA","no","NA","NA","NA","exon_intersect_chrX:70199812|70199882"]
["chrX:70216553|70252422:-","chrX:70210442|70216553:-_chrX:70252422|70252556:-","UN_IGBP1-AS1_UP_LS0009","IGBP1-AS1","lncRNA gene","no",3.16,0,0,0.006,57,0,0,"0(0)","TGCT","no","NA","TE_intersect_:70216535|chrX|70216535|70217654|THE1C-int:ERVL-MaLR:LTR|117|+","NA","NA"]
["chrX:70223670|70249969:-","chrX:70223415|70223670:-_chrX:70249969|70250114:-_chrX:70252422|70252545:-","UN_RN7SL581P_UP_LS0001","RN7SL581P","small non-coding RNA gene","no",4.49,0,0,0.002,21,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:70223670|70252422:-","chrX:70223432|70223670:-_chrX:70252422|70252566:-","UN_RN7SL581P_UP_LS0002","RN7SL581P","small non-coding RNA gene","no",3.01,0,0,0.002,22,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:70250114|70252422:-","chrX:70223415|70223670:-_chrX:70249969|70250114:-_chrX:70252422|70252545:-","UN_RN7SL581P_UP_LS0004","RN7SL581P","small non-coding RNA gene","no",3.66,0,0,0.003,30,0,0,"0(0)","TGCT","no","NA","TE_intersect_:70250071|chrX|70250071|70250176|L2c:L2:LINE|243|-","NA","NA"]
["chrX:70424743|70424976:+","chrX:70424711|70424743:+_chrX:70424976|70425089:+_chrX:70425354|70425457:+_chrX:70425763|70425856:+_chrX:70426052|70426111:+_chrX:70426371|70426469:+_chrX:70426648|70426741:+_chrX:70426866|70427011:+_chrX:70427137|70427219:+_chrX:70427313|70427463:+_chrX:70429493|70429714:+_chrX:70429915|70430063:+_chrX:70432307|70432454:+_chrX:70432579|70432661:+_chrX:70432912|70432940:+_chrX:70433034|70433384:+","UN_GDPD2_LS0004","GDPD2","protein coding gene","no",1.44,0,0,0.006,57,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:70423382|70424976","exon_intersect_chrX:70424976|70425089"]
["chrX:70426469|70426553:+","chrX:70423141|70423382:+_chrX:70424976|70425089:+_chrX:70425354|70425457:+_chrX:70425763|70425856:+_chrX:70426052|70426111:+_chrX:70426371|70426469:+_chrX:70426553|70426741:+_chrX:70426866|70427011:+_chrX:70427137|70427219:+_chrX:70427313|70427463:+_chrX:70429493|70430063:+_chrX:70432307|70432454:+_chrX:70432579|70432661:+_chrX:70432912|70432940:+_chrX:70433034|70433380:+","UN_GDPD2_LS0007","GDPD2","protein coding gene","no",2.39,0,0,0.004,43,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chrX:70426469|70426648","intron_intersect_chrX:70426469|70426648"]
["chrX:70926355|70926527:-","chrX:70925588|70925943:-_chrX:70926070|70926355:-_chrX:70926527|70927041:-_chrX:70927282|70927384:-_chrX:70927484|70927623:-_chrX:70927798|70928017:-_chrX:70928145|70928257:-_chrX:70928456|70928633:-_chrX:70928844|70929002:-_chrX:70929628|70930022:-_chrX:70930977|70931096:-","UN_SLC7A3_LS0003","SLC7A3","protein coding gene","no",6.6,0,0,0.002,22,0,0,"0(0)","TGCT;THYM","no","NA","NA","exon_intersect_chrX:70926527|70926693","intron_intersect_chrX:70926178|70926527"]
["chrX:70963257|71061028:-","chrX:70963104|70963257:-_chrX:71061028|71061118:-_chrX:71061843|71061967:-_chrX:71062854|71062931:-","UN_SLC7A3_UP_LS0006","SLC7A3","protein coding gene","no",5.79,0,0,0.007,71,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:71059244|71061118","exon_intersect_chrX:70962964|70963293"]
["chrX:70989916|71061028:-","chrX:70989883|70989916:-_chrX:71061028|71061118:-_chrX:71061843|71061967:-_chrX:71062854|71062949:-_chrX:71068142|71068388:-","UN_SLC7A3_UP_LS0011","SLC7A3","protein coding gene","no",1.62,0,0,0.004,43,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chrX:71059244|71061118","NA"]
["chrX:7105838|7125689:-","chrX:7048920|7050472:-_chrX:7077220|7077449:-_chrX:7105620|7105838:-_chrX:7125689|7125735:-","UN_PUDP_LS0010","PUDP","protein coding gene","no",10.02,0,0,0.004,41,0,0,"0(0)","SKCM","no","TE_intersect_:7125605|chrX|7125605|7125963|THE1B:ERVL-MaLR:LTR|102|-","NA","intron_intersect_chrX:7117034|7147860","intron_intersect_chrX:7105838|7113005"]
["chrX:71104125|71104379:+","chrX:71103976|71104125:+_chrX:71104379|71104772:+","UN_AL590764.2_LS0001","AL590764.2","protein coding gene","no",1.58,0,0,0.005,52,0,0,"0(0)","SKCM","no","NA","NA","intron_intersect_chrX:71104112|71104298","exon_intersect_chrX:71104298|71104448"]
["chrX:71143627|71183911:-","chrX:71140715|71140851:-_chrX:71143522|71143627:-_chrX:71183911|71186053:-","UN_IL2RG_UP_LS0004","IL2RG","protein coding gene","no",2.47,0,0,0.001,11,0,0,"0(0)","LAML","no","TE_intersect_:71183753|chrX|71183753|71184045|AluSz:Alu:SINE|113|+","NA","exon_intersect_chrX:71183559|71184017","NA"]
["chrX:71217895|71223692:+","chrX:71217624|71217895:+_chrX:71223692|71225546:+","GJB1_LS005","GJB1","protein coding gene","no",4.2,0,0,0.004,40,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrX:71215290|71222584","exon_intersect_chrX:71223692|71225516"]
["chrX:71224389|71224429:-","chrX:71224083|71224389:-_chrX:71224429|71224807:-","UN_GJB1_LS0025","GJB1","protein coding gene","no",5.16,0,0,0.002,23,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:71223692|71225516","exon_intersect_chrX:71223692|71225516"]
["chrX:71239844|71240065:+","chrX:71239658|71239844:+_chrX:71240065|71240107:+_chrX:71240487|71240682:+","UN_ZMYM3_LS0004","ZMYM3","protein coding gene","no",2.33,0,0,0.003,29,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:71239624|71241108","exon_intersect_chrX:71239624|71241108"]
["chrX:71239990|71240084:+","chrX:71239703|71239733:+_chrX:71239788|71239990:+_chrX:71240084|71240251:+","UN_ZMYM3_LS0010","ZMYM3","protein coding gene","no",2.48,0,0,0.002,22,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:71239624|71241108","exon_intersect_chrX:71239624|71241108"]
["chrX:71240163|71240260:+","chrX:71239706|71240163:+_chrX:71240260|71240505:+_chrX:71240779|71241039:+","UN_ZMYM3_LS0015","ZMYM3","protein coding gene","no",2.19,0,0,0.004,39,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:71239624|71241108","exon_intersect_chrX:71239624|71241108"]
["chrX:71253274|71253574:-","chrX:71239624|71241108:-_chrX:71241227|71241344:-_chrX:71242170|71242424:-_chrX:71242970|71243084:-_chrX:71243829|71243980:-_chrX:71244302|71244893:-_chrX:71245339|71245485:-_chrX:71245668|71245842:-_chrX:71245986|71246098:-_chrX:71246353|71246512:-_chrX:71246595|71246692:-_chrX:71247345|71247510:-_chrX:71247734|71247906:-_chrX:71248162|71248312:-_chrX:71248438|71248524:-_chrX:71248686|71248801:-_chrX:71249019|71249169:-_chrX:71249461|71250203:-_chrX:71250432|71250726:-_chrX:71251178|71251244:-_chrX:71251558|71251601:-_chrX:71252589|71253274:-_chrX:71253574|71253675:-","UN_ZMYM3_LS0056","ZMYM3","protein coding gene","no",1.53,0,0,0.004,35,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chrX:71253274|71254029","intron_intersect_chrX:71253274|71254029"]
["chrX:71253274|71266344:-","chrX:71239625|71241108:-_chrX:71241227|71241344:-_chrX:71242170|71242424:-_chrX:71242970|71243084:-_chrX:71243829|71243980:-_chrX:71244302|71244470:-_chrX:71244790|71244893:-_chrX:71245339|71245485:-_chrX:71245668|71245842:-_chrX:71245986|71246098:-_chrX:71246353|71246512:-_chrX:71246631|71246692:-_chrX:71247345|71247510:-_chrX:71247734|71247906:-_chrX:71248162|71248312:-_chrX:71248438|71248524:-_chrX:71248686|71248801:-_chrX:71249019|71249169:-_chrX:71249461|71249679:-_chrX:71250026|71250203:-_chrX:71250432|71250726:-_chrX:71251178|71251244:-_chrX:71251558|71251601:-_chrX:71252589|71253274:-_chrX:71266344|71266875:-","UN_AL590764.1_UP_LS0001","AL590764.1","lncRNA gene","no",3.64,0,0,0.002,18,0,0,"0(0)","SARC","no","TE_intersect_:71264926|chrX|71264926|71266887|HERVH-int:ERV1:LTR|141|+","NA","NA","intron_intersect_chrX:71253274|71254029"]
["chrX:71300192|71300505:-","chrX:71300011|71300192:-_chrX:71300505|71300801:-","UN_NONO_LS0044","NONO","protein coding gene","no",3.63,0,0,0.004,37,0,0,"0(0)","OV","no","TE_intersect_:71300434|chrX|71300434|71300519|AluSx:Alu:SINE|82|-","NA","exon_intersect_chrX:71299942|71301168","exon_intersect_chrX:71299942|71301168"]
["chrX:71300462|71300614:-","chrX:71300293|71300462:-_chrX:71300614|71300647:-","UN_NONO_LS0055","NONO","protein coding gene","no",1.8,0,0,0.003,29,0,0,"0(0)","OV","no","NA","TE_intersect_:71300434|chrX|71300434|71300519|AluSx:Alu:SINE|82|-","exon_intersect_chrX:71299942|71301168","exon_intersect_chrX:71299942|71301168"]
["chrX:71300487|71300614:-","chrX:71300254|71300487:-_chrX:71300614|71300799:-","UN_NONO_LS0059","NONO","protein coding gene","no",2.75,0,0,0.004,34,0,0,"0(0)","OV","no","NA","TE_intersect_:71300434|chrX|71300434|71300519|AluSx:Alu:SINE|82|-","exon_intersect_chrX:71299942|71301168","exon_intersect_chrX:71299942|71301168"]
["chrX:71300563|71300604:-","chrX:71300332|71300563:-_chrX:71300604|71300800:-","UN_NONO_LS0068","NONO","protein coding gene","no",11.31,0,0,0.006,60,0,0,"0(0)","OV","no","TE_intersect_:71300519|chrX|71300519|71300614|AluSx:Alu:SINE|126|-","TE_intersect_:71300519|chrX|71300519|71300614|AluSx:Alu:SINE|126|-","exon_intersect_chrX:71299942|71301168","exon_intersect_chrX:71299942|71301168"]
["chrX:71336848|71338311:+","chrX:71336806|71336848:+_chrX:71338311|71338413:+_chrX:71350126|71350243:+_chrX:71361405|71361778:+","UN_AL590762.2_UP_LS0007","AL590762.2","pseudogene","no",3.02,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:71336185|chrX|71336185|71336906|LTR8:ERV1:LTR|137|-","TE_intersect_:71338059|chrX|71338059|71338492|MSTB2:ERVL-MaLR:LTR|143|+","NA","NA"]
["chrX:71337563|71338311:+","chrX:71336792|71337563:+_chrX:71338311|71338413:+_chrX:71350126|71350243:+_chrX:71351488|71351610:+_chrX:71351842|71352225:+_chrX:71352403|71353180:+_chrX:71361405|71361774:+","UN_AL590762.2_UP_LS0008","AL590762.2","pseudogene","no",3.78,0,0,0.006,61,0,0,"0(0)","KICH;TGCT","no","TE_intersect_:71337490|chrX|71337490|71338056|L1M4:L1:LINE|185|-","TE_intersect_:71338059|chrX|71338059|71338492|MSTB2:ERVL-MaLR:LTR|143|+","NA","NA"]
["chrX:71338413|71350126:+","chrX:71336792|71337563:+_chrX:71338311|71338413:+_chrX:71350126|71350243:+_chrX:71351488|71351610:+_chrX:71351842|71352225:+_chrX:71352403|71353180:+_chrX:71361405|71361774:+","UN_AL590762.2_UP_LS0011","AL590762.2","pseudogene","no",15.92,0,0,0.007,65,0,0,"0(0)","KICH;TGCT","no","TE_intersect_:71338059|chrX|71338059|71338492|MSTB2:ERVL-MaLR:LTR|143|+","TE_intersect_:71350100|chrX|71350100|71350399|AluJo:Alu:SINE|141|-","NA","NA"]
["chrX:71350243|71361405:+","chrX:71336799|71337563:+_chrX:71338311|71338413:+_chrX:71350126|71350243:+_chrX:71361405|71361693:+","UN_TAF1_UP_LS0002","TAF1","protein coding gene","yes",3.27,0,0,0.006,55,0,0,"0(0)","TGCT","no","TE_intersect_:71350100|chrX|71350100|71350399|AluJo:Alu:SINE|141|-","TE_intersect_:71361381|chrX|71361381|71361575|AluJo:Alu:SINE|186|-","NA","NA"]
["chrX:71352225|71352403:+","chrX:71336792|71337563:+_chrX:71338311|71338413:+_chrX:71350126|71350243:+_chrX:71351488|71351610:+_chrX:71351842|71352225:+_chrX:71352403|71353180:+_chrX:71361405|71361774:+","UN_AL590762.2_UP_LS0017","AL590762.2","pseudogene","no",2.2,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:71352039|chrX|71352039|71352238|Charlie4z:hAT-Charlie:DNA|241|-","NA","NA","NA"]
["chrX:71352919|71361405:+","chrX:71352418|71352919:+_chrX:71361405|71361695:+","UN_TAF1_UP_LS0004","TAF1","protein coding gene","yes",2.16,0,0,0.008,77,0,0,"0(0)","TGCT","no","NA","TE_intersect_:71361381|chrX|71361381|71361575|AluJo:Alu:SINE|186|-","exon_intersect_chrX:71352418|71352988","NA"]
["chrX:71353180|71361405:+","chrX:71336792|71337563:+_chrX:71338311|71338413:+_chrX:71350126|71350243:+_chrX:71351488|71351610:+_chrX:71351842|71352225:+_chrX:71352403|71353180:+_chrX:71361405|71361774:+","UN_TAF1_UP_LS0005","TAF1","protein coding gene","yes",2.89,0,0,0.007,67,0,0,"0(0)","TGCT","no","NA","TE_intersect_:71361381|chrX|71361381|71361575|AluJo:Alu:SINE|186|-","NA","NA"]
["chrX:71414662|71414894:-","chrX:71413837|71414101:-_chrX:71414279|71414662:-_chrX:71414894|71415016:-_chrX:71416261|71416454:-","UN_TAF1_LS0025","TAF1","protein coding gene","yes",1.53,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:71414736|chrX|71414736|71415047|AluSx:Alu:SINE|125|+","NA","intron_intersect_chrX:71414086|71416618","intron_intersect_chrX:71414086|71416618"]
["chrX:71567653|71567998:+","chrX:71564664|71564753:+_chrX:71567500|71567653:+_chrX:71567998|71568116:+_chrX:71573620|71574655:+","UN_OGT_LS0043","OGT","protein coding gene","no",33.53,0,0,0.007,66,0,0,"0(0)","LAML;OV","no","NA","NA","exon_intersect_chrX:71567500|71567973","exon_intersect_chrX:71567993|71568116"]
["chrX:71664254|71670258:+","chrX:71664204|71664254:+_chrX:71670258|71670334:+_chrX:71766883|71766924:+_chrX:71767031|71767199:+","UN_BX276092.4_UP_LS0002","BX276092.4","pseudogene","no",14.69,0,0,0.001,14,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chrX:71663862|71664271","NA"]
["chrX:71664966|71669678:-","chrX:71662998|71663168:-_chrX:71663275|71663316:-_chrX:71663862|71663907:-_chrX:71664193|71664269:-_chrX:71664810|71664966:-_chrX:71669678|71671279:-","UN_CXCR3_UP_LS0014","CXCR3","protein coding gene","no",0.6,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","NA","intron_intersect_chrX:71664966|71665553"]
["chrX:71670334|71766883:+","chrX:71664204|71664254:+_chrX:71670258|71670334:+_chrX:71766883|71766924:+_chrX:71767031|71767199:+","UN_BX276092.3_UP_LS0001","BX276092.3","pseudogene","no",13.4,0,0,0.003,30,0,0,"0(0)","THYM","no","NA","NA","NA","exon_intersect_chrX:71766883|71766924"]
["chrX:71714692|71715575:-","chrX:71714371|71714544:-_chrX:71714651|71714692:-_chrX:71715575|71715651:-_chrX:71716195|71716387:-","UN_CXorf49_LS0001","CXorf49","protein coding gene","no",28.42,0,0,0.003,31,0,0,"0(0)","THYM","no","NA","NA","exon_intersect_chrX:71715575|71715651","intron_intersect_chrX:71714692|71715247"]
["chrX:71716853|71717283:+","chrX:71716196|71716853:+_chrX:71717283|71717511:+_chrX:71719921|71719966:+_chrX:71720526|71720567:+_chrX:71720674|71720800:+","UN_CXorf49_LS0002","CXorf49","protein coding gene","no",4.2,0,0,0.007,66,0,0,"0(0)","OV","no","NA","NA","intron_intersect_chrX:71716387|71716928","exon_intersect_chrX:71716928|71718151"]
["chrX:71719159|71719921:+","chrX:71718951|71719159:+_chrX:71719921|71719966:+_chrX:71720526|71720567:+_chrX:71720674|71720815:+","UN_BX276092.2_LS0001","BX276092.2","pseudogene","no",20.01,0,0,0.01,98,0,0,"0(0)","TGCT;UCS","no","NA","NA","exon_intersect_chrX:71719142|71719625","exon_intersect_chrX:71719919|71719973"]
["chrX:71761654|71764064:-","chrX:71760775|71760901:-_chrX:71761008|71761049:-_chrX:71761609|71761654:-_chrX:71764064|71764292:-_chrX:71764722|71764967:-","UN_BX276092.6_UP_LS0003","BX276092.6","pseudogene","no",3.46,0,0,0.019,185,0,0,"0(0)","BLCA;CESC;OV;THYM","no","NA","NA","exon_intersect_chrX:71763424|71764647","exon_intersect_chrX:71761609|71761659"]
["chrX:71764292|71764722:-","chrX:71760775|71760901:-_chrX:71761008|71761049:-_chrX:71761609|71761654:-_chrX:71764064|71764292:-_chrX:71764722|71764967:-","UN_CXorf49B_LS0002","CXorf49B","protein coding gene","no",2.61,0,0,0.018,177,0,0,"0(0)","BLCA;CESC;HNSC;OV","no","NA","NA","intron_intersect_chrX:71764647|71765188","exon_intersect_chrX:71763424|71764647"]
["chrX:71764292|71765180:-","chrX:71760775|71760901:-_chrX:71761008|71761049:-_chrX:71761609|71761654:-_chrX:71764064|71764292:-_chrX:71765180|71765262:-","UN_CXorf49B_LS0003","CXorf49B","protein coding gene","no",2.16,0,0,0.001,11,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chrX:71764647|71765188","exon_intersect_chrX:71763424|71764647"]
["chrX:71766000|71766883:+","chrX:71765188|71765380:+_chrX:71765924|71766000:+_chrX:71766883|71766924:+_chrX:71767031|71767199:+","UN_CXorf49B_LS0004","CXorf49B","protein coding gene","no",3.82,0,0,0.002,21,0,0,"0(0)","THYM","no","NA","NA","intron_intersect_chrX:71766000|71766283","exon_intersect_chrX:71766883|71766924"]
["chrX:71815778|71816322:+","chrX:71815546|71815778:+_chrX:71816322|71816398:+_chrX:71816657|71816802:+_chrX:71823416|71823457:+_chrX:71823563|71823726:+","UN_BX276092.3_UP_LS0006","BX276092.3","pseudogene","no",4.65,0,0,0.016,157,0,0,"0(0)","GBM;MESO;OV;THYM","no","NA","NA","NA","NA"]
["chrX:71816398|71816657:+","chrX:71815546|71815778:+_chrX:71816322|71816398:+_chrX:71816657|71816802:+_chrX:71823416|71823457:+_chrX:71823563|71823726:+","UN_BX276092.3_UP_LS0007","BX276092.3","pseudogene","no",5.47,0,0,0.017,164,0,0,"0(0)","GBM;MESO;OV;THYM","no","NA","NA","NA","NA"]
["chrX:71816802|71823416:+","chrX:71815546|71815778:+_chrX:71816322|71816398:+_chrX:71816657|71816802:+_chrX:71823416|71823457:+_chrX:71823563|71823726:+","UN_BX276092.3_UP_LS0008","BX276092.3","pseudogene","no",4.66,0,0,0.017,162,0,0,"0(0)","GBM;MESO;OV;THYM","no","TE_intersect_:71816711|chrX|71816711|71822835|L1PA5:L1:LINE|67|+","NA","NA","NA"]
["chrX:71823457|71823563:+","chrX:71815546|71815778:+_chrX:71816322|71816398:+_chrX:71816657|71816802:+_chrX:71823416|71823457:+_chrX:71823563|71823726:+","UN_BX276092.3_UP_LS0009","BX276092.3","pseudogene","no",5.15,0,0,0.012,119,0,0,"0(0)","GBM;MESO;OV;THYM","no","NA","NA","NA","NA"]
["chrX:71907079|71910606:-","chrX:71906909|71907079:-_chrX:71910606|71910708:-","UN_BX119927.1_UP_LS0001","BX119927.1","pseudogene","no",3.26,0,0,0.024,233,0,0,"0(0)","OV;TGCT;THCA","no","NA","TE_intersect_:71906991|chrX|71906991|71907101|FLAM_C:Alu:SINE|174|+","NA","NA"]
["chrX:72023110|72044642:+","chrX:72023097|72023110:+_chrX:72044642|72044979:+","UN_NHSL2_LS0011","NHSL2","protein coding gene","no",1.55,0,0,0.003,29,0,0,"0(0)","OV","no","TE_intersect_:72023084|chrX|72023084|72023172|L2b:L2:LINE|364|-","NA","NA","exon_intersect_chrX:72044545|72044892"]
["chrX:72044816|72044885:-","chrX:72044642|72044816:-_chrX:72044885|72044977:-","UN_NHSL2_LS0018","NHSL2","protein coding gene","no",30.08,0,0,0.003,33,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:72044545|72044892","exon_intersect_chrX:72044545|72044892"]
["chrX:72069753|72071250:+","chrX:72069637|72069753:+_chrX:72071250|72072178:+","UN_NHSL2_LS0024","NHSL2","protein coding gene","no",3.78,0,0,0.007,63,0,0,"0(0)","PCPG","no","NA","NA","NA","NA"]
["chrX:72178765|72186461:+","chrX:72177983|72178765:+_chrX:72186461|72186534:+_chrX:72196785|72196904:+_chrX:72197368|72198335:+","UN_RN7SL388P_UP_LS0005","RN7SL388P","small non-coding RNA gene","no",3.33,0,0,0.009,85,0,0,"0(0)","TGCT","no","TE_intersect_:72178582|chrX|72178582|72179397|SVA_E:SVA:Retroposon|131|+","NA","NA","exon_intersect_chrX:72186234|72186534"]
["chrX:72179100|72179268:+","chrX:72177974|72179100:+_chrX:72179268|72179699:+","UN_PIN4_UP_LS0010","PIN4","protein coding gene","no",1.33,0,0,0.015,143,0,0,"0(0)","ESCA;OV;STAD","no","TE_intersect_:72179020|chrX|72179020|72179991|SVA_E:SVA:Retroposon|56|+","TE_intersect_:72179020|chrX|72179020|72179991|SVA_E:SVA:Retroposon|56|+","NA","NA"]
["chrX:72273408|72273801:-","chrX:72272540|72272772:-_chrX:72273232|72273408:-_chrX:72273801|72273972:-_chrX:72275053|72275150:-_chrX:72275544|72275724:-_chrX:72276157|72276227:-","UN_PIN4_LS0090","PIN4","protein coding gene","no",579.63,0,0,0.004,34,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chrX:72273801|72275150","intron_intersect_chrX:72273389|72273801"]
["chrX:72275655|72275677:+","chrX:72272586|72272722:+_chrX:72273259|72273357:+_chrX:72273804|72273969:+_chrX:72275108|72275133:+_chrX:72275574|72275655:+_chrX:72275677|72275724:+","UN_PIN4_LS0124","PIN4","protein coding gene","no",7.61,0,0,0.001,14,0,0,"0(0)","DLBC","no","NA","NA","exon_intersect_chrX:72275544|72275724","exon_intersect_chrX:72275544|72275724"]
["chrX:72305422|72305698:-","chrX:72301883|72302244:-_chrX:72302810|72302934:-_chrX:72305302|72305422:-_chrX:72305698|72305892:-","UN_AL133500.1_LS0016","AL133500.1","protein coding gene","no",22.84,0,0,0.003,26,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chrX:72305565|72305825","exon_intersect_chrX:72305302|72305565"]
["chrX:72306190|72306477:-","chrX:72301968|72302244:-_chrX:72302810|72302934:-_chrX:72305825|72306190:-_chrX:72306477|72306907:-","UN_AL133500.1_LS0022","AL133500.1","protein coding gene","no",17.79,0.14,0,0.024,234,0.003,2,"0(0)","UVM","no","NA","NA","exon_intersect_chrX:72306477|72306987","intron_intersect_chrX:72305914|72306477"]
["chrX:72307332|72307845:+","chrX:72307025|72307332:+_chrX:72307845|72307904:+_chrX:72308443|72308598:+_chrX:72311702|72311873:+","UN_AL133500.1_LS0031","AL133500.1","protein coding gene","no",1.23,0,0,0.004,43,0,0,"0(0)","THCA;UVM","no","NA","NA","NA","NA"]
["chrX:72307502|72307845:+","chrX:72307025|72307502:+_chrX:72307845|72307904:+_chrX:72308443|72308598:+_chrX:72309438|72309609:+_chrX:72311702|72311871:+","UN_AL133500.1_LS0033","AL133500.1","protein coding gene","no",1.43,0,0,0.005,52,0,0,"0(0)","THCA","no","NA","NA","NA","NA"]
["chrX:72309609|72311702:+","chrX:72307157|72307904:+_chrX:72308443|72308598:+_chrX:72309438|72309609:+_chrX:72311702|72311882:+","UN_AL133500.1_LS0042","AL133500.1","protein coding gene","no",3.16,0,0,0.004,43,0,0,"0(0)","THCA;UVM","no","TE_intersect_:72309521|chrX|72309521|72309742|MIRb:MIR:SINE|312|-","TE_intersect_:72311487|chrX|72311487|72311806|AluJb:Alu:SINE|135|-","NA","NA"]
["chrX:72351838|72351932:-","chrX:72329517|72330076:-_chrX:72351733|72351838:-_chrX:72351932|72352321:-","UN_HDAC8_LS0006","HDAC8","protein coding gene","no",4.25,0,0,0.003,27,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chrX:72351838|72376979","intron_intersect_chrX:72351838|72376979"]
["chrX:72351838|72351936:-","chrX:72329517|72330076:-_chrX:72351733|72351838:-_chrX:72351936|72352321:-","UN_HDAC8_LS0007","HDAC8","protein coding gene","no",2.99,0,0,0.003,24,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chrX:72351838|72376979","intron_intersect_chrX:72351838|72376979"]
["chrX:72351838|72352382:-","chrX:72329516|72330076:-_chrX:72351733|72351838:-_chrX:72352382|72352430:-","UN_HDAC8_LS0009","HDAC8","protein coding gene","no",2.97,0,0,0.002,17,0,0,"0(0)","UVM","no","NA","NA","intron_intersect_chrX:72351838|72376979","intron_intersect_chrX:72351838|72376979"]
["chrX:72681762|72681944:+","chrX:72680659|72681762:+_chrX:72681944|72682025:+_chrX:72682075|72682223:+","UN_PHKA1_LS0033","PHKA1","protein coding gene","no",1.68,0,0,0.002,17,0,0,"0(0)","ESCA","no","TE_intersect_:72680888|chrX|72680888|72681912|SVA_F:SVA:Retroposon|111|+","TE_intersect_:72681912|chrX|72681912|72682944|SVA_F:SVA:Retroposon|54|+","intron_intersect_chrX:72676150|72684498","intron_intersect_chrX:72676150|72684498"]
["chrX:72682025|72682075:+","chrX:72680659|72681762:+_chrX:72681944|72682025:+_chrX:72682075|72682223:+","UN_PHKA1_LS0034","PHKA1","protein coding gene","no",4.39,0,0,0.003,25,0,0,"0(0)","ESCA","no","TE_intersect_:72681912|chrX|72681912|72682944|SVA_F:SVA:Retroposon|54|+","TE_intersect_:72681912|chrX|72681912|72682944|SVA_F:SVA:Retroposon|54|+","intron_intersect_chrX:72676150|72684498","intron_intersect_chrX:72676150|72684498"]
["chrX:72730980|72731106:+","chrX:72730915|72730980:+_chrX:72731106|72731187:+_chrX:72731552|72731703:+_chrX:72731940|72732052:+_chrX:72732291|72732392:+","UN_DMRTC1B_UP_LS0003","DMRTC1B","protein coding gene","no",3.35,0,0,0.002,18,0,0,"0(0)","TGCT","no","TE_intersect_:72730656|chrX|72730656|72731115|LTR7B:ERV1:LTR|61|+","TE_intersect_:72730656|chrX|72730656|72731115|LTR7B:ERV1:LTR|61|+","NA","NA"]
["chrX:72731187|72731552:+","chrX:72730915|72730980:+_chrX:72731106|72731187:+_chrX:72731552|72731703:+_chrX:72731940|72732052:+_chrX:72732291|72732392:+","UN_DMRTC1B_UP_LS0004","DMRTC1B","protein coding gene","no",7.34,0,0,0.004,34,0,0,"0(0)","TGCT","no","TE_intersect_:72731115|chrX|72731115|72731267|MSTB:ERVL-MaLR:LTR|164|+","TE_intersect_:72731540|chrX|72731540|72731869|L1MD3:L1:LINE|219|+","NA","NA"]
["chrX:72731703|72731940:+","chrX:72730915|72730980:+_chrX:72731106|72731187:+_chrX:72731552|72731703:+_chrX:72731940|72732052:+_chrX:72732291|72732392:+","UN_DMRTC1B_UP_LS0005","DMRTC1B","protein coding gene","no",5.26,0,0,0.002,19,0,0,"0(0)","TGCT","no","TE_intersect_:72731540|chrX|72731540|72731869|L1MD3:L1:LINE|219|+","TE_intersect_:72731903|chrX|72731903|72731968|L2c:L2:LINE|215|+","NA","NA"]
["chrX:72732052|72732291:+","chrX:72730915|72730980:+_chrX:72731106|72731187:+_chrX:72731552|72731703:+_chrX:72731940|72732052:+_chrX:72732291|72732392:+","UN_DMRTC1B_UP_LS0007","DMRTC1B","protein coding gene","no",5.13,0,0,0.002,19,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:72732391|72737846:+","chrX:72730863|72730980:+_chrX:72731106|72731187:+_chrX:72731552|72731703:+_chrX:72731940|72732052:+_chrX:72732291|72732391:+_chrX:72737846|72737956:+_chrX:72763181|72771023:+","UN_DMRTC1B_UP_LS0009","DMRTC1B","protein coding gene","no",5.21,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:72732301|chrX|72732301|72732429|MIRc:MIR:SINE|221|+","NA","NA","NA"]
["chrX:72737956|72740710:+","chrX:72737595|72737663:+_chrX:72737846|72737956:+_chrX:72740710|72740861:+_chrX:72752465|72752808:+_chrX:72763181|72771028:+","UN_DMRTC1B_UP_LS0011","DMRTC1B","protein coding gene","no",1.94,0,0,0.001,12,0,0,"0(0)","TGCT","no","NA","TE_intersect_:72740708|chrX|72740708|72740869|U1:snRNA:snRNA|169|-","NA","exon_intersect_chrX:72740706|72740869"]
["chrX:72737956|72763181:+","chrX:72730863|72730980:+_chrX:72731106|72731187:+_chrX:72731552|72731703:+_chrX:72731940|72732052:+_chrX:72732291|72732391:+_chrX:72737846|72737956:+_chrX:72763181|72771023:+","UN_DMRTC1B_UP_LS0012","DMRTC1B","protein coding gene","no",2.88,0,0,0.002,18,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:73002323|73002943:-","chrX:72998388|72998850:-_chrX:73001211|73002323:-_chrX:73002943|73003463:-","UN_DMRTC1_UP_LS0011","DMRTC1","protein coding gene","no",3.64,0,0,0.005,46,0,0,"0(0)","PRAD","no","NA","NA","NA","intron_intersect_chrX:73002323|73002405"]
["chrX:73002323|73003012:-","chrX:72998388|72998850:-_chrX:73001211|73001325:-_chrX:73002187|73002323:-_chrX:73003012|73003121:-","UN_DMRTC1_UP_LS0012","DMRTC1","protein coding gene","no",1.9,0,0,0.004,34,0,0,"0(0)","PRAD","no","NA","NA","NA","intron_intersect_chrX:73002323|73002405"]
["chrX:73002323|73003036:-","chrX:72998388|72998850:-_chrX:73001211|73001325:-_chrX:73002187|73002323:-_chrX:73003036|73003464:-","UN_DMRTC1_UP_LS0013","DMRTC1","protein coding gene","no",1.98,0,0,0.004,36,0,0,"0(0)","PRAD","no","NA","NA","NA","intron_intersect_chrX:73002323|73002405"]
["chrX:73080060|73081698:+","chrX:73079894|73080060:+_chrX:73081698|73081812:+_chrX:73084173|73084635:+","UN_TOMM20P4_UP_LS0007","TOMM20P4","pseudogene","no",3.8,0,0,0.004,40,0,0,"0(0)","PRAD","no","NA","NA","NA","exon_intersect_chrX:73081698|73081812"]
["chrX:73080080|73080700:+","chrX:73079894|73080080:+_chrX:73080700|73081812:+_chrX:73084173|73084635:+","UN_TOMM20P4_UP_LS0008","TOMM20P4","pseudogene","no",2.59,0,0,0.004,34,0,0,"0(0)","PRAD","no","NA","NA","NA","exon_intersect_chrX:73080700|73080836"]
["chrX:73729166|73729579:+","chrX:73729094|73729166:+_chrX:73729579|73729695:+_chrX:73739366|73744744:+","UN_SEPHS1P4_UP_LS0001","SEPHS1P4","pseudogene","no",2.32,0,0,0.004,34,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chrX:73729695|73739366:+","chrX:73729081|73729695:+_chrX:73739366|73743868:+","UN_SEPHS1P4_UP_LS0002","SEPHS1P4","pseudogene","no",2.54,0,0,0.008,80,0,0,"0(0)","OV","no","NA","NA","NA","NA"]
["chrX:73826347|73826738:-","chrX:73820656|73821029:-_chrX:73822071|73822216:-_chrX:73826115|73826347:-_chrX:73826738|73827928:-_chrX:73829068|73829231:-_chrX:73831066|73831270:-","XIST_LS007","XIST","lncRNA gene","yes",12.55,0,0,0.003,31,0,0,"0(0)","TGCT","yes","NA","NA","exon_intersect_chrX:73792205|73829231","exon_intersect_chrX:73792205|73829231"]
["chrX:73845413|73846006:+","chrX:73844779|73844952:+_chrX:73845244|73845413:+_chrX:73846006|73846179:+","UN_XIST_LS0098","XIST","lncRNA gene","yes",5.27,0,0,0.002,21,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chrX:73841382|73852753","exon_intersect_chrX:73841382|73852753"]
["chrX:73849847|73849915:-","chrX:73831145|73831274:-_chrX:73833238|73833374:-_chrX:73837440|73837503:-_chrX:73841382|73849847:-_chrX:73849915|73852753:-","UN_XIST_LS0124","XIST","lncRNA gene","yes",42.39,1.92,0,0.002,21,0.003,2,"0(0)","LAML","no","NA","NA","exon_intersect_chrX:73841382|73852753","exon_intersect_chrX:73841382|73852753"]
["chrX:74069584|74124258:-","chrX:74069358|74069584:-_chrX:74124258|74124473:-_chrX:74127996|74128139:-","UN_FTX_LS0010","FTX","lncRNA gene","no",0.94,0,0,0.003,32,0,0,"0(0)","HNSC","no","TE_intersect_:74121994|chrX|74121994|74126748|HERVH-int:ERV1:LTR|180|-","NA","intron_intersect_chrX:74122725|74130562","exon_intersect_chrX:74069169|74070408"]
["chrX:74124473|74127996:-","chrX:74124296|74124473:-_chrX:74127996|74128115:-","UN_DDX3P1_LS0001","DDX3P1","pseudogene","no",3.19,0,0,0.013,123,0,0,"0(0)","ESCA;HNSC","no","TE_intersect_:74127046|chrX|74127046|74130197|HERVH-int:ERV1:LTR|227|-","TE_intersect_:74121994|chrX|74121994|74126748|HERVH-int:ERV1:LTR|180|-","intron_intersect_chrX:74122725|74130562","intron_intersect_chrX:74122725|74130562"]
["chrX:74166617|74167375:+","chrX:74166437|74166617:+_chrX:74167375|74167451:+","UN_FTX_LS0026","FTX","lncRNA gene","no",1.15,0,0,0.004,35,0,0,"0(0)","OV","no","TE_intersect_:74166503|chrX|74166503|74167007|SVA_D:SVA:Retroposon|77|+","TE_intersect_:74167007|chrX|74167007|74167499|SVA_E:SVA:Retroposon|104|+","intron_intersect_chrX:74162528|74173890","intron_intersect_chrX:74162528|74173890"]
["chrX:74166617|74167503:+","chrX:74166443|74166617:+_chrX:74167503|74167787:+","UN_FTX_LS0027","FTX","lncRNA gene","no",1.06,0,0,0.005,51,0,0,"0(0)","OV","no","TE_intersect_:74166503|chrX|74166503|74167007|SVA_D:SVA:Retroposon|77|+","TE_intersect_:74167499|chrX|74167499|74168148|SVA_D:SVA:Retroposon|77|+","intron_intersect_chrX:74162528|74173890","intron_intersect_chrX:74162528|74173890"]
["chrX:74167387|74167517:+","chrX:74166906|74167387:+_chrX:74167517|74168114:+","UN_FTX_LS0032","FTX","lncRNA gene","no",2.38,0,0,0.001,12,0,0,"0(0)","TGCT","no","TE_intersect_:74167007|chrX|74167007|74167499|SVA_E:SVA:Retroposon|104|+","TE_intersect_:74167499|chrX|74167499|74168148|SVA_D:SVA:Retroposon|77|+","intron_intersect_chrX:74162528|74173890","intron_intersect_chrX:74162528|74173890"]
["chrX:74525438|74525750:+","chrX:74525406|74525438:+_chrX:74525750|74525893:+_chrX:74529213|74529441:+_chrX:74531333|74533914:+","UN_SLC16A2_LS0015","SLC16A2","protein coding gene","no",1.33,0,0,0.005,44,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrX:74524809|74525750","exon_intersect_chrX:74525750|74525893"]
["chrX:74586104|74586172:+","chrX:74586067|74586104:+_chrX:74586172|74586366:+","UN_RLIM_LS0004","RLIM","protein coding gene","no",1.93,0,0,0.002,19,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chrX:74585217|74593061","exon_intersect_chrX:74585217|74593061"]
["chrX:75556078|75562191:+","chrX:75555881|75556078:+_chrX:75562191|75562255:+","UN_BRAFP1_UP_LS0001","BRAFP1","pseudogene","no",2.34,0,0,0.002,20,0,0,"0(0)","GBM","no","TE_intersect_:75555159|chrX|75555159|75561178|L1PA2:L1:LINE|29|-","TE_intersect_:75561270|chrX|75561270|75567303|L1PA3:L1:LINE|49|-","NA","NA"]
["chrX:75624888|76121419:+","chrX:75604936|75605022:+_chrX:75624701|75624888:+_chrX:76121419|76121509:+","UN_PBDC1_UP_LS0001","PBDC1","protein coding gene","no",2.9,0,0,0.002,22,0,0,"0(0)","GBM","no","NA","TE_intersect_:76121110|chrX|76121110|76121544|MSTB:ERVL-MaLR:LTR|174|+","NA","NA"]
["chrX:7593794|7678333:+","chrX:7593289|7593794:+_chrX:7678333|7678590:+","UN_VCX_UP_LS0008","VCX","protein coding gene","no",2.71,0,0,0.025,244,0,0,"0(0)","BLCA;ESCA;LUSC;OV;THYM;UCS","no","NA","NA","NA","NA"]
["chrX:76218107|76218236:-","chrX:76217166|76218107:-_chrX:76218236|76219230:-","UN_MAGEE2_UP_LS0024","MAGEE2","protein coding gene","no",0.9,0,0,0.001,12,0,0,"0(0)","ESCA","no","TE_intersect_:76218156|chrX|76218156|76219199|SVA_F:SVA:Retroposon|73|-","TE_intersect_:76217149|chrX|76217149|76218138|SVA_F:SVA:Retroposon|50|-","NA","NA"]
["chrX:76658668|76692967:-","chrX:76655498|76658308:-_chrX:76658502|76658668:-_chrX:76692967|76693087:-_chrX:77007276|77007380:-_chrX:77014227|77014283:-","UN_MIR325HG_LS0004","MIR325HG","lncRNA gene","no",2.68,0,0,0.011,109,0,0,"0(0)","GBM;LGG","no","NA","TE_intersect_:76658609|chrX|76658609|76660264|L1M1:L1:LINE|173|+","exon_intersect_chrX:76692967|76693087","exon_intersect_chrX:76658502|76658865"]
["chrX:76693087|77014227:-","chrX:76655498|76658308:-_chrX:76658502|76658865:-_chrX:76692967|76693087:-_chrX:77014227|77014502:-","UN_MIR325HG_LS0014","MIR325HG","lncRNA gene","no",0.56,0,0,0.002,18,0,0,"0(0)","GBM","no","NA","TE_intersect_:76693077|chrX|76693077|76693237|L1ME4a:L1:LINE|282|-","exon_intersect_chrX:77014227|77014532","intron_intersect_chrX:76693087|76717512"]
["chrX:7678528|7732992:+","chrX:7593281|7593794:+_chrX:7678333|7678528:+_chrX:7732992|7733131:+_chrX:7803301|7804985:+","UN_VCX_UP_LS0016","VCX","protein coding gene","no",3.09,0,0,0.014,135,0,0,"0(0)","LUSC;THYM;UCS","no","NA","NA","NA","NA"]
["chrX:76837892|77046163:-","chrX:76655498|76658308:-_chrX:76692967|76693087:-_chrX:76837814|76837892:-_chrX:77046163|77046581:-","UN_TRAPPC13P1_UP_LS0003","TRAPPC13P1","pseudogene","no",2.37,0,0,0.005,45,0,0,"0(0)","LIHC","no","TE_intersect_:77045078|chrX|77045078|77046224|L1MA9:L1:LINE|204|+","TE_intersect_:76837869|chrX|76837869|76837917|MSTA:ERVL-MaLR:LTR|189|-","NA","intron_intersect_chrX:76837892|77005404"]
["chrX:77247954|77291380:-","chrX:77247794|77247954:-_chrX:77291380|77291508:-","UN_MIR325HG_UP_LS0004","MIR325HG","lncRNA gene","no",1.48,0,0,0.002,23,0,0,"0(0)","ESCA","no","TE_intersect_:77289051|chrX|77289051|77292608|L1PA4:L1:LINE|53|-","TE_intersect_:77244267|chrX|77244267|77250292|L1PA3:L1:LINE|37|+","NA","NA"]
["chrX:7733131|7803301:+","chrX:7593281|7593794:+_chrX:7678333|7678528:+_chrX:7732992|7733131:+_chrX:7803301|7804985:+","UN_VCX_UP_LS0026","VCX","protein coding gene","no",2.86,0,0,0.011,103,0,0,"0(0)","THYM","no","NA","NA","NA","NA"]
["chrX:77633712|77634269:-","chrX:77599735|77599820:-_chrX:77600434|77600564:-_chrX:77616613|77616730:-_chrX:77618806|77618981:-_chrX:77620395|77620532:-_chrX:77633207|77633384:-_chrX:77633566|77633712:-_chrX:77634269|77634703:-_chrX:77635915|77636056:-_chrX:77652114|77652276:-","UN_ATRX_LS0024","ATRX","protein coding gene","no",3.1,0,0,0.006,57,0,0,"0(0)","LAML","no","TE_intersect_:77634255|chrX|77634255|77634554|L2a:L2:LINE|303|+","NA","intron_intersect_chrX:77633865|77634422","exon_intersect_chrX:77633566|77633865"]
["chrX:77768350|77785982:-","chrX:77758915|77768350:-_chrX:77785982|77786208:-","UN_ATRX_LS0052","ATRX","protein coding gene","no",1.87,0,0,0.006,60,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chrX:77785845|77786269","intron_intersect_chrX:77728080|77785845"]
["chrX:77827672|77865526:-","chrX:77826367|77827672:-_chrX:77865526|77865570:-","UN_MAGT1_LS0010","MAGT1","protein coding gene","no",3.42,0,0,0.005,48,0,0,"0(0)","OV","no","TE_intersect_:77865278|chrX|77865278|77865592|AluY:Alu:SINE|73|-","TE_intersect_:77827431|chrX|77827431|77827739|AluSg:Alu:SINE|107|-","intron_intersect_chrX:77857497|77868108","exon_intersect_chrX:77826364|77829235"]
["chrX:77827672|77948359:-","chrX:77826360|77827672:-_chrX:77948359|77948406:-","UN_ATRX_UP_LS0002","ATRX","protein coding gene","no",4.79,0,0,0.005,48,0,0,"0(0)","OV","no","TE_intersect_:77948145|chrX|77948145|77948424|AluY:Alu:SINE|75|-","TE_intersect_:77827431|chrX|77827431|77827739|AluSg:Alu:SINE|107|-","intron_intersect_chrX:77910835|77962553","exon_intersect_chrX:77826364|77829235"]
["chrX:77828034|77828557:+","chrX:77827508|77827647:+_chrX:77827825|77828034:+_chrX:77828557|77828635:+","UN_MAGT1_LS0012","MAGT1","protein coding gene","no",0.98,0,0,0.004,40,0,0,"0(0)","ESCA","no","TE_intersect_:77827988|chrX|77827988|77828241|AluSz6:Alu:SINE|115|-","TE_intersect_:77828288|chrX|77828288|77828585|AluSz:Alu:SINE|138|+","exon_intersect_chrX:77826364|77829235","exon_intersect_chrX:77826364|77829235"]
["chrX:77899593|77905184:+","chrX:77899463|77899593:+_chrX:77905184|77907373:+","COX7B_LS007","COX7B","protein coding gene","no",15.47,0,0,0.005,45,0,0,"0(0)","UCEC","yes","NA","NA","intron_intersect_chrX:77899593|77901744","exon_intersect_chrX:77905184|77907373"]
["chrX:78060233|78062887:-","chrX:78060074|78060233:-_chrX:78062887|78063048:-","UN_PGK1_LS0041","PGK1","protein coding gene","no",4.94,0.1,0,0.009,86,0.001,1,"0(0)","TGCT","no","TE_intersect_:78062812|chrX|78062812|78063242|MLT2A1:ERVL:LTR|87|-","NA","NA","NA"]
["chrX:78096748|78103021:-","chrX:78096397|78096748:-_chrX:78103021|78103185:-","UN_PGK1_LS0042","PGK1","protein coding gene","no",2.27,0,0,0.004,40,0,0,"0(0)","OV","no","TE_intersect_:78102495|chrX|78102495|78103203|LTR8:ERV1:LTR|167|+","TE_intersect_:78096329|chrX|78096329|78097007|LTR38C:ERV1:LTR|154|-","intron_intersect_chrX:78096768|78104174","exon_intersect_chrX:78096653|78096768"]
["chrX:78123367|78124867:-","chrX:78123197|78123367:-_chrX:78124867|78125023:-","UN_PGK1_LS0078","PGK1","protein coding gene","no",4.05,0,0,0.005,47,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chrX:78123374|78124874","exon_intersect_chrX:78123195|78123374"]
["chrX:78139686|78140948:-","chrX:78129748|78131773:-_chrX:78133338|78133448:-_chrX:78136915|78136990:-_chrX:78137749|78137883:-_chrX:78137962|78138098:-_chrX:78138843|78138924:-_chrX:78139561|78139686:-_chrX:78140948|78141211:-","UN_PGAM4_UP_LS0005","PGAM4","protein coding gene","no",6.94,0,0,0.012,113,0,0,"0(0)","LUSC","no","NA","NA","NA","exon_intersect_chrX:78139561|78139706"]
["chrX:7843782|7843873:+","chrX:7843188|7843305:+_chrX:7843498|7843782:+_chrX:7843873|7844143:+","VCX_LS008","VCX","protein coding gene","no",14.4,0,0,0.009,87,0,0,"0(0)","SKCM;TGCT","yes","NA","NA","exon_intersect_chrX:7843498|7844143","exon_intersect_chrX:7843498|7844143"]
["chrX:7843842|7843873:+","chrX:7843088|7843305:+_chrX:7843498|7843752:+_chrX:7843813|7843842:+_chrX:7843873|7844143:+","UN_VCX_LS0006","VCX","protein coding gene","no",52.69,0,0,0.016,149,0,0,"0(0)","SKCM;UCS","no","NA","NA","exon_intersect_chrX:7843498|7844143","exon_intersect_chrX:7843498|7844143"]
["chrX:7843872|7843993:+","chrX:7843188|7843305:+_chrX:7843498|7843752:+_chrX:7843813|7843872:+_chrX:7843993|7844143:+","UN_VCX_LS0011","VCX","protein coding gene","no",48.15,0,0,0.012,111,0,0,"0(0)","ESCA;OV;SKCM","no","NA","NA","exon_intersect_chrX:7843498|7844143","exon_intersect_chrX:7843498|7844143"]
["chrX:78653514|78675784:+","chrX:78653447|78653514:+_chrX:78675784|78675869:+_chrX:78750174|78750223:+_chrX:78750730|78750792:+_chrX:78751210|78751311:+_chrX:78754791|78758894:+","UN_LPAR4_UP_LS0009","LPAR4","protein coding gene","no",10.96,0,0,0.007,66,0,0,"0(0)","LAML","no","TE_intersect_:78653478|chrX|78653478|78653523|L2c:L2:LINE|244|+","NA","NA","NA"]
["chrX:78675869|78722258:+","chrX:78653456|78653514:+_chrX:78675784|78675869:+_chrX:78722258|78722663:+","UN_LPAR4_UP_LS0010","LPAR4","protein coding gene","no",5.05,0,0,0.004,42,0,0,"0(0)","LAML","no","NA","TE_intersect_:78722242|chrX|78722242|78722542|L1PA13:L1:LINE|103|+","NA","NA"]
["chrX:78675869|78738814:+","chrX:78653453|78653514:+_chrX:78675784|78675869:+_chrX:78738814|78738950:+_chrX:78745585|78745684:+_chrX:78750174|78750223:+_chrX:78750730|78750792:+_chrX:78751210|78751311:+_chrX:78754791|78758700:+","UN_LPAR4_UP_LS0011","LPAR4","protein coding gene","no",10.82,0,0,0.003,26,0,0,"0(0)","LAML","no","NA","TE_intersect_:78738730|chrX|78738730|78739144|MSTA:ERVL-MaLR:LTR|159|-","NA","NA"]
["chrX:78675869|78745585:+","chrX:78653458|78653514:+_chrX:78675784|78675869:+_chrX:78745585|78745684:+_chrX:78750174|78750223:+_chrX:78750730|78750792:+_chrX:78751210|78751311:+_chrX:78754791|78758715:+","UN_LPAR4_UP_LS0012","LPAR4","protein coding gene","no",5.5,0,0,0.002,21,0,0,"0(0)","LAML","no","NA","TE_intersect_:78745237|chrX|78745237|78745644|L2c:L2:LINE|355|-","NA","NA"]
["chrX:78675869|78750174:+","chrX:78653447|78653514:+_chrX:78675784|78675869:+_chrX:78750174|78750223:+_chrX:78750730|78750792:+_chrX:78751210|78751311:+_chrX:78754791|78758894:+","UN_RPL7P54_UP_LS0001","RPL7P54","pseudogene","no",8.38,0,0,0.003,25,0,0,"0(0)","LAML","no","NA","NA","NA","exon_intersect_chrX:78750174|78750223"]
["chrX:78745684|78750174:+","chrX:78653458|78653514:+_chrX:78675784|78675869:+_chrX:78745585|78745684:+_chrX:78750174|78750223:+_chrX:78750730|78750792:+_chrX:78751210|78751311:+_chrX:78754791|78758715:+","UN_RPL7P54_UP_LS0003","RPL7P54","pseudogene","no",10.12,0,0,0.002,22,0,0,"0(0)","LAML","no","NA","NA","NA","exon_intersect_chrX:78750174|78750223"]
["chrX:79450908|79451472:+","chrX:79449940|79450908:+_chrX:79451472|79451526:+","UN_TBX22_UP_LS0002","TBX22","protein coding gene","no",3.73,0,0,0.002,17,0,0,"0(0)","LAML","no","TE_intersect_:79450675|chrX|79450675|79451150|MER4A1:ERV1:LTR|98|-","NA","NA","NA"]
["chrX:79451545|79452000:+","chrX:79451208|79451545:+_chrX:79452000|79452213:+_chrX:79453810|79455390:+","UN_TBX22_UP_LS0003","TBX22","protein coding gene","no",6.96,0,0,0.002,16,0,0,"0(0)","LAML","no","NA","TE_intersect_:79451872|chrX|79451872|79452038|MIR:MIR:SINE|317|-","NA","NA"]
["chrX:79452213|79453810:+","chrX:79447224|79450908:+_chrX:79451472|79452213:+_chrX:79453810|79457279:+","UN_TBX22_UP_LS0004","TBX22","protein coding gene","no",3.46,0,0,0.003,30,0,0,"0(0)","LAML","no","TE_intersect_:79452109|chrX|79452109|79452447|L1M3e:L1:LINE|221|+","TE_intersect_:79453553|chrX|79453553|79453920|MER4A:ERV1:LTR|133|+","NA","NA"]
["chrX:8045270|8062611:+","chrX:8045121|8045270:+_chrX:8062611|8062668:+_chrX:8228335|8228405:+_chrX:8367603|8368564:+","AC097626.1_LS001","AC097626.1","lncRNA gene","no",8.65,0,0,0.004,41,0,0,"0(0)","OV","yes","NA","TE_intersect_:8062330|chrX|8062330|8062842|MER1A:hAT-Charlie:DNA|98|+","NA","NA"]
["chrX:8062668|8069589:+","chrX:8045087|8045270:+_chrX:8062611|8062668:+_chrX:8069589|8071872:+","UN_AC097626.1_LS0003","AC097626.1","lncRNA gene","no",2.59,0,0,0.003,26,0,0,"0(0)","OV","no","TE_intersect_:8062330|chrX|8062330|8062842|MER1A:hAT-Charlie:DNA|98|+","TE_intersect_:8069561|chrX|8069561|8069867|AluSx1:Alu:SINE|114|-","NA","NA"]
["chrX:80687003|80687949:-","chrX:80670854|80677363:-_chrX:80681341|80681499:-_chrX:80681997|80682094:-_chrX:80682465|80682628:-_chrX:80684010|80684162:-_chrX:80685462|80685536:-_chrX:80686863|80687003:-_chrX:80687949|80688125:-_chrX:80689768|80689846:-_chrX:80689967|80690092:-_chrX:80691053|80691173:-_chrX:80691823|80691978:-_chrX:80692089|80692150:-_chrX:80692940|80693051:-_chrX:80695908|80695990:-_chrX:80696739|80696863:-_chrX:80699957|80700064:-_chrX:80703480|80703593:-_chrX:80704678|80704846:-_chrX:80707427|80707503:-_chrX:80709428|80709577:-_chrX:80716157|80716250:-_chrX:80717573|80717759:-_chrX:80719489|80719656:-_chrX:80722562|80722787:-_chrX:80723748|80723876:-_chrX:80724933|80725067:-_chrX:80728752|80728905:-_chrX:80729916|80730020:-_chrX:80731088|80731211:-_chrX:80733456|80733496:-_chrX:80734118|80734218:-_chrX:80735127|80735197:-_chrX:80735988|80736088:-_chrX:80739370|80739435:-_chrX:80744032|80744253:-_chrX:80745569|80745729:-_chrX:80791275|80791431:-_chrX:80791854|80791952:-_chrX:80793622|80793772:-_chrX:80808539|80808598:-_chrX:80809013|80809042:-_chrX:80809246|80809304:-_chrX:80809441|80809683:-","UN_BRWD3_LS0018","BRWD3","protein coding gene","no",12.42,0,0,0.002,23,0,0,"0(0)","LAML","no","TE_intersect_:80687524|chrX|80687524|80688022|MER68B:ERVL:LTR|205|+","NA","intron_intersect_chrX:80687003|80688069","intron_intersect_chrX:80687003|80688069"]
["chrX:80746879|80791854:-","chrX:80669472|80677363:-_chrX:80681341|80681499:-_chrX:80681997|80682094:-_chrX:80682465|80682628:-_chrX:80684010|80684162:-_chrX:80685462|80685536:-_chrX:80686863|80687003:-_chrX:80688069|80688125:-_chrX:80689768|80689846:-_chrX:80689967|80690092:-_chrX:80691053|80691173:-_chrX:80691823|80691978:-_chrX:80692089|80692150:-_chrX:80692940|80693051:-_chrX:80695908|80695990:-_chrX:80696739|80696863:-_chrX:80699957|80700064:-_chrX:80703480|80703593:-_chrX:80704678|80704846:-_chrX:80707427|80707503:-_chrX:80709428|80709577:-_chrX:80716157|80716250:-_chrX:80717573|80717759:-_chrX:80719489|80719656:-_chrX:80722562|80722787:-_chrX:80723748|80723876:-_chrX:80724933|80725067:-_chrX:80728752|80728905:-_chrX:80729916|80730020:-_chrX:80733456|80733496:-_chrX:80734118|80734218:-_chrX:80735127|80735197:-_chrX:80735988|80736088:-_chrX:80744032|80744253:-_chrX:80745569|80745729:-_chrX:80746821|80746879:-_chrX:80791854|80791952:-_chrX:80793622|80793772:-_chrX:80808539|80808598:-_chrX:80809013|80809042:-_chrX:80809246|80809304:-_chrX:80809441|80809812:-","UN_BRWD3_LS0041","BRWD3","protein coding gene","no",1.02,0,0,0.005,44,0,0,"0(0)","LGG","no","NA","NA","exon_intersect_chrX:80791854|80791952","intron_intersect_chrX:80745729|80791854"]
["chrX:80809293|80841520:+","chrX:80809127|80809293:+_chrX:80841520|80841605:+_chrX:80841915|80842131:+_chrX:80845611|80847124:+","UN_RNU6-493P_UP_LS0003","RNU6-493P","small non-coding RNA gene","no",0.68,0,0,0.003,31,0,0,"0(0)","KICH","no","NA","TE_intersect_:80841427|chrX|80841427|80841680|MSTC:ERVL-MaLR:LTR|243|+","exon_intersect_chrX:80809246|80809304","NA"]
["chrX:8122723|8228335:+","chrX:8122404|8122723:+_chrX:8228335|8228405:+_chrX:8439828|8439979:+","UN_AC097626.1_LS0005","AC097626.1","lncRNA gene","no",4.12,0,0,0.003,31,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chrX:81827443|81833184:-","chrX:81827353|81827443:-_chrX:81833184|81833309:-","UN_HMGN5_UP_LS0009","HMGN5","protein coding gene","yes",2.38,0,0,0.007,71,0,0,"0(0)","GBM;OV","no","TE_intersect_:81832490|chrX|81832490|81834112|L1PA3:L1:LINE|31|+","TE_intersect_:81826340|chrX|81826340|81827566|L1PA7:L1:LINE|88|+","NA","NA"]
["chrX:8228405|8454815:+","chrX:8007378|8007449:+_chrX:8018056|8018155:+_chrX:8228335|8228405:+_chrX:8454815|8454923:+_chrX:8456393|8457853:+","UN_VCX3B_UP_LS0013","VCX3B","protein coding gene","no",2.21,0.03,0,0.003,28,0.001,1,"0(0)","KICH","no","TE_intersect_:8228391|chrX|8228391|8228433|MIRc:MIR:SINE|238|-","NA","NA","NA"]
["chrX:82799425|82908250:+","chrX:82757840|82757984:+_chrX:82766540|82766833:+_chrX:82769181|82769271:+_chrX:82775851|82775994:+_chrX:82799239|82799425:+_chrX:82908250|82908683:+","UN_ATG4AP1_UP_LS0002","ATG4AP1","pseudogene","no",5.94,0,0,0.007,69,0,0,"0(0)","KIRP","no","TE_intersect_:82798626|chrX|82798626|82800205|ERVL-B4-int:ERVL:LTR|195|+","TE_intersect_:82908036|chrX|82908036|82908438|MLT1B:ERVL-MaLR:LTR|234|+","NA","NA"]
["chrX:8439980|8454815:+","chrX:8122396|8122723:+_chrX:8228335|8228405:+_chrX:8439828|8439980:+_chrX:8454815|8454923:+_chrX:8456393|8457853:+","UN_VCX3B_UP_LS0019","VCX3B","protein coding gene","no",1.91,0.07,0,0.004,40,0.003,2,"0(0)","KICH","no","NA","NA","NA","NA"]
["chrX:8455702|8456393:+","chrX:8122332|8122723:+_chrX:8228335|8228405:+_chrX:8439828|8439980:+_chrX:8443650|8443907:+_chrX:8454815|8454923:+_chrX:8455634|8455702:+_chrX:8456393|8457862:+","UN_VCX3B_UP_LS0024","VCX3B","protein coding gene","no",1.83,0,0,0.003,25,0,0,"0(0)","KICH","no","NA","TE_intersect_:8456374|chrX|8456374|8456669|AluSg4:Alu:SINE|95|-","NA","NA"]
["chrX:8466059|8466090:+","chrX:8465426|8465552:+_chrX:8465745|8466059:+_chrX:8466090|8466119:+_chrX:8466360|8466469:+","UN_VCX3B_LS0011","VCX3B","protein coding gene","no",22,0,0,0.008,77,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:8465745|8466510","exon_intersect_chrX:8465745|8466510"]
["chrX:8466059|8466300:+","chrX:8465434|8465552:+_chrX:8465745|8466059:+_chrX:8466300|8466501:+","UN_VCX3B_LS0013","VCX3B","protein coding gene","no",5.33,0,0,0.005,46,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:8465745|8466510","exon_intersect_chrX:8465745|8466510"]
["chrX:8466089|8466120:+","chrX:8465426|8465552:+_chrX:8465745|8466029:+_chrX:8466060|8466089:+_chrX:8466120|8466179:+_chrX:8466300|8466469:+","UN_VCX3B_LS0015","VCX3B","protein coding gene","no",13.12,0,0,0.005,44,0,0,"0(0)","ESCA","no","NA","NA","exon_intersect_chrX:8465745|8466510","exon_intersect_chrX:8465745|8466510"]
["chrX:8466209|8466360:+","chrX:8465392|8465552:+_chrX:8465745|8465999:+_chrX:8466030|8466059:+_chrX:8466180|8466209:+_chrX:8466360|8466480:+","UN_VCX3B_LS0029","VCX3B","protein coding gene","no",58.56,0,0,0.009,90,0,0,"0(0)","ESCA;STAD","no","NA","NA","exon_intersect_chrX:8465745|8466510","exon_intersect_chrX:8465745|8466510"]
["chrX:8490748|8493625:-","chrX:8486872|8490748:-_chrX:8493625|8493927:-","UN_VCX2_UP_LS0004","VCX2","protein coding gene","no",2.54,0,0,0.004,37,0,0,"0(0)","MESO","no","NA","TE_intersect_:8490637|chrX|8490637|8490951|AluJb:Alu:SINE|181|+","NA","NA"]
["chrX:8493746|8494264:-","chrX:8486916|8490748:-_chrX:8493625|8493746:-_chrX:8494264|8494346:-_chrX:8494892|8495130:-_chrX:8504282|8504654:-","UN_VCX2_UP_LS0005","VCX2","protein coding gene","no",2.75,0,0,0.003,30,0,0,"0(0)","MESO","no","TE_intersect_:8494182|chrX|8494182|8494556|THE1D:ERVL-MaLR:LTR|84|-","TE_intersect_:8493684|chrX|8493684|8494182|MER44D:TcMar-Tigger:DNA|155|+","NA","NA"]
["chrX:8494346|8494892:-","chrX:8486916|8490748:-_chrX:8493625|8493746:-_chrX:8494264|8494346:-_chrX:8494892|8495130:-_chrX:8504282|8504654:-","UN_VCX2_UP_LS0006","VCX2","protein coding gene","no",2.8,0,0,0.004,40,0,0,"0(0)","MESO","no","TE_intersect_:8494825|chrX|8494825|8495345|MLT1F2:ERVL-MaLR:LTR|272|-","TE_intersect_:8494182|chrX|8494182|8494556|THE1D:ERVL-MaLR:LTR|84|-","NA","NA"]
["chrX:8495130|8504282:-","chrX:8486916|8490748:-_chrX:8493625|8493746:-_chrX:8494264|8494346:-_chrX:8494892|8495130:-_chrX:8504282|8504654:-","UN_VCX2_UP_LS0007","VCX2","protein coding gene","no",1.99,0,0,0.004,39,0,0,"0(0)","MESO","no","NA","TE_intersect_:8494825|chrX|8494825|8495345|MLT1F2:ERVL-MaLR:LTR|272|-","NA","NA"]
["chrX:86338096|86352983:+","chrX:86338033|86338096:+_chrX:86352983|86353336:+","UN_DACH2_LS0009","DACH2","protein coding gene","no",1.78,0,0,0.001,14,0,0,"0(0)","ESCA","no","TE_intersect_:86336355|chrX|86336355|86339187|L1P2:L1:LINE|102|+","TE_intersect_:86350178|chrX|86350178|86354023|L1HS:L1:LINE|4|-","intron_intersect_chrX:86305086|86376824","intron_intersect_chrX:86305086|86376824"]
["chrX:86952144|86969622:-","chrX:86950256|86952144:-_chrX:86969622|86969739:-_chrX:86969885|86970017:-","UN_AL390058.1_UP_LS0007","AL390058.1","pseudogene","no",2.39,0,0,0.016,153,0,0,"0(0)","ESCA;LUSC;THYM","no","TE_intersect_:86967728|chrX|86967728|86969626|L1PA15:L1:LINE|178|+","TE_intersect_:86951931|chrX|86951931|86952151|MER41-int:ERV1:LTR|86|-","NA","NA"]
["chrX:86969739|86969885:-","chrX:86950256|86952144:-_chrX:86969622|86969739:-_chrX:86969885|86970017:-","UN_AL390058.1_UP_LS0009","AL390058.1","pseudogene","no",2.83,0,0,0.012,116,0,0,"0(0)","ESCA;LUSC","no","TE_intersect_:86969631|chrX|86969631|86975651|L1PA2:L1:LINE|25|+","TE_intersect_:86969631|chrX|86969631|86975651|L1PA2:L1:LINE|25|+","NA","NA"]
["chrX:8730500|8731642:+","chrX:8730082|8730500:+_chrX:8731642|8731772:+","UN_ANOS1_LS0010","ANOS1","protein coding gene","no",1.75,0,0,0.002,23,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chrX:8699745|8731830","intron_intersect_chrX:8699745|8731830"]
["chrX:87531447|87532115:+","chrX:87531113|87531447:+_chrX:87532115|87532242:+","UN_KLHL4_LS0002","KLHL4","protein coding gene","no",1.46,0,0,0.003,32,0,0,"0(0)","ESCA","no","TE_intersect_:87530271|chrX|87530271|87531457|L1PA2:L1:LINE|24|-","TE_intersect_:87532068|chrX|87532068|87532818|L1PA2:L1:LINE|29|-","intron_intersect_chrX:87518315|87613877","intron_intersect_chrX:87518315|87613877"]
["chrX:87635775|87666475:+","chrX:87517814|87518315:+_chrX:87613877|87614044:+_chrX:87614434|87614570:+_chrX:87617932|87618128:+_chrX:87622211|87622423:+_chrX:87625610|87625796:+_chrX:87632210|87632434:+_chrX:87633749|87633911:+_chrX:87635563|87635775:+_chrX:87666475|87670050:+","UN_KLHL4_LS0009","KLHL4","protein coding gene","no",2.28,0,0,0.004,41,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chrX:87635775|87664764","exon_intersect_chrX:87666475|87670050"]
["chrX:87635775|87669329:+","chrX:87517814|87518315:+_chrX:87613877|87614044:+_chrX:87614434|87614570:+_chrX:87617932|87618128:+_chrX:87622211|87622423:+_chrX:87625610|87625796:+_chrX:87632210|87632434:+_chrX:87633749|87633911:+_chrX:87635563|87635775:+_chrX:87669329|87670050:+","KLHL4_LS010","KLHL4","protein coding gene","no",2.58,0,0,0.005,51,0,0,"0(0)","GBM","yes","NA","NA","intron_intersect_chrX:87635775|87664764","exon_intersect_chrX:87666475|87670050"]
["chrX:87703833|87703887:+","chrX:87703734|87703833:+_chrX:87703887|87704276:+","UN_RPSAP15_LS0019","RPSAP15","pseudogene","no",3.56,0,0,0.002,20,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:87703343|87704203","exon_intersect_chrX:87703343|87704203"]
["chrX:87724212|87750755:-","chrX:87723935|87724212:-_chrX:87750755|87750873:-","UN_Z83818.2_LS0006","Z83818.2","lncRNA gene","no",4.63,0,0,0.002,18,0,0,"0(0)","MESO","no","TE_intersect_:87750564|chrX|87750564|87752988|L1M3c:L1:LINE|278|+","TE_intersect_:87724011|chrX|87724011|87727669|MER61-int:ERV1:LTR|93|-","NA","NA"]
["chrX:88567119|88572028:-","chrX:88498054|88498159:-_chrX:88566955|88567119:-_chrX:88572028|88572166:-_chrX:88613348|88613465:-","UN_AL024493.1_UP_LS0010","AL024493.1","pseudogene","no",2.98,0,0,0.006,58,0,0,"0(0)","LGG","no","TE_intersect_:88571875|chrX|88571875|88572105|MIRb:MIR:SINE|335|-","NA","NA","NA"]
["chrX:88572166|88613348:-","chrX:88498054|88498159:-_chrX:88566955|88567119:-_chrX:88572028|88572166:-_chrX:88613348|88613465:-","UN_AL024493.1_UP_LS0013","AL024493.1","pseudogene","no",1.86,0,0,0.006,60,0,0,"0(0)","LGG","no","TE_intersect_:88612880|chrX|88612880|88614543|L1MA4:L1:LINE|217|+","NA","NA","NA"]
["chrX:88963306|88988896:+","chrX:88963196|88963306:+_chrX:88988896|88989066:+_chrX:88989815|88990617:+","UN_AL121872.1_UP_LS0003","AL121872.1","lncRNA gene","no",6.99,0,0,0.01,95,0,0,"0(0)","SKCM","no","TE_intersect_:88963047|chrX|88963047|88963389|THE1B:ERVL-MaLR:LTR|142|+","TE_intersect_:88987599|chrX|88987599|88989983|MER4-int:ERV1:LTR|154|+","NA","NA"]
["chrX:89080181|89081092:-","chrX:89073429|89080181:-_chrX:89081092|89081603:-","UN_AL731768.1_UP_LS0001","AL731768.1","pseudogene","no",2.9,0,0,0.004,42,0,0,"0(0)","SARC","no","TE_intersect_:89077250|chrX|89077250|89081217|MER57-int:ERV1:LTR|115|-","TE_intersect_:89077250|chrX|89077250|89081217|MER57-int:ERV1:LTR|115|-","NA","NA"]
["chrX:89213601|89213971:-","chrX:89213215|89213601:-_chrX:89213971|89214008:-_chrX:89271050|89271104:-_chrX:89271496|89271703:-","UN_AL731768.1_UP_LS0003","AL731768.1","pseudogene","no",8.7,0,0,0.004,36,0,0,"0(0)","TGCT","no","NA","TE_intersect_:89213323|chrX|89213323|89213602|AluSx:Alu:SINE|111|+","NA","NA"]
["chrX:89213601|89271050:-","chrX:89213213|89213601:-_chrX:89271050|89271104:-_chrX:89271496|89271729:-","UN_AL731768.1_UP_LS0004","AL731768.1","pseudogene","no",2.6,0,0,0.003,28,0,0,"0(0)","TGCT","no","NA","TE_intersect_:89213323|chrX|89213323|89213602|AluSx:Alu:SINE|111|+","NA","NA"]
["chrX:89214008|89271050:-","chrX:89213215|89213601:-_chrX:89213971|89214008:-_chrX:89271050|89271104:-_chrX:89271496|89271703:-","UN_AL731768.1_UP_LS0006","AL731768.1","pseudogene","no",1.85,0,0,0.002,21,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:89271104|89271496:-","chrX:89213213|89213601:-_chrX:89271050|89271104:-_chrX:89271496|89271729:-","UN_AL731768.1_UP_LS0007","AL731768.1","pseudogene","no",5.09,0,0,0.004,38,0,0,"0(0)","TGCT","no","TE_intersect_:89271085|chrX|89271085|89271528|MER61-int:ERV1:LTR|217|-","TE_intersect_:89271085|chrX|89271085|89271528|MER61-int:ERV1:LTR|217|-","NA","NA"]
["chrX:89515693|89543627:+","chrX:89515479|89515693:+_chrX:89543627|89544578:+","UN_TGIF2LX_UP_LS0008","TGIF2LX","protein coding gene","no",5.23,0,0,0.008,73,0,0,"0(0)","OV;PRAD","no","TE_intersect_:89515314|chrX|89515314|89515893|LTR66:ERVL:LTR|153|+","TE_intersect_:89543593|chrX|89543593|89543899|AluSx3:Alu:SINE|108|-","NA","NA"]
["chrX:89529529|89539245:-","chrX:89529109|89529529:-_chrX:89539245|89539295:-","UN_SRIP2_UP_LS0006","SRIP2","pseudogene","no",5.64,0,0,0.011,103,0,0,"0(0)","STAD","no","TE_intersect_:89538302|chrX|89538302|89539256|L1MC2:L1:LINE|280|+","TE_intersect_:89528617|chrX|89528617|89531371|PABL_A-int:ERV1:LTR|148|-","NA","NA"]
["chrX:89580910|89586763:-","chrX:89580546|89580910:-_chrX:89586763|89587064:-","UN_SRIP2_UP_LS0010","SRIP2","pseudogene","no",2.57,0,0,0.005,50,0,0,"0(0)","LIHC","no","TE_intersect_:89585082|chrX|89585082|89586990|HERV3-int:ERV1:LTR|128|-","TE_intersect_:89579056|chrX|89579056|89584999|HERV3-int:ERV1:LTR|131|-","NA","NA"]
["chrX:90234631|90235064:+","chrX:90207120|90207220:+_chrX:90234508|90234631:+_chrX:90235064|90235175:+_chrX:90266185|90266254:+_chrX:90286878|90286939:+_chrX:90291689|90291810:+_chrX:90309546|90312364:+","UN_AL121823.1_UP_LS0002","AL121823.1","lncRNA gene","no",4.89,0,0,0.005,44,0,0,"0(0)","GBM","no","TE_intersect_:90234478|chrX|90234478|90234790|AluJb:Alu:SINE|208|-","TE_intersect_:90235010|chrX|90235010|90235559|HERVFH19-int:ERV1:LTR|66|+","NA","NA"]
["chrX:90483817|90487610:-","chrX:90478921|90483817:-_chrX:90487610|90487794:-","UN_UBE2V1P9_UP_LS0006","UBE2V1P9","pseudogene","no",3.03,0,0,0.001,13,0,0,"0(0)","UVM","no","TE_intersect_:90487268|chrX|90487268|90488389|ERVL-int:ERVL:LTR|187|-","TE_intersect_:90483804|chrX|90483804|90484102|MLT1F2:ERVL-MaLR:LTR|253|+","NA","NA"]
["chrX:90773772|90778559:-","chrX:90773617|90773772:-_chrX:90778559|90779053:-","UN_RNU6-555P_UP_LS0004","RNU6-555P","small non-coding RNA gene","no",3.54,0,0,0.001,14,0,0,"0(0)","TGCT","no","TE_intersect_:90775654|chrX|90775654|90778704|HERVH-int:ERV1:LTR|99|-","TE_intersect_:90773762|chrX|90773762|90774138|HERVH-int:ERV1:LTR|81|-","NA","NA"]
["chrX:91773287|91776582:-","chrX:91772141|91773287:-_chrX:91776582|91776797:-","UN_SERBP1P4_UP_LS0004","SERBP1P4","pseudogene","no",2.35,0,0,0.002,22,0,0,"0(0)","GBM","no","TE_intersect_:91776445|chrX|91776445|91776636|MIRb:MIR:SINE|255|+","NA","NA","NA"]
["chrX:92100700|92103447:-","chrX:92098935|92099587:-_chrX:92100188|92100700:-_chrX:92103447|92105972:-_chrX:92106729|92106847:-_chrX:92108134|92108306:-","UN_PCDH11X_LS0006","PCDH11X","protein coding gene","no",20.22,0,0,0.005,49,0,0,"0(0)","TGCT","no","TE_intersect_:92102573|chrX|92102573|92105434|HERVH-int:ERV1:LTR|112|-","TE_intersect_:92100690|chrX|92100690|92101063|HERVH-int:ERV1:LTR|82|-","intron_intersect_chrX:91983505|92113246","intron_intersect_chrX:91983505|92113246"]
["chrX:92100700|92105293:-","chrX:92098587|92100700:-_chrX:92105293|92105883:-","UN_PCDH11X_LS0007","PCDH11X","protein coding gene","no",6.34,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:92102573|chrX|92102573|92105434|HERVH-int:ERV1:LTR|112|-","TE_intersect_:92100690|chrX|92100690|92101063|HERVH-int:ERV1:LTR|82|-","intron_intersect_chrX:91983505|92113246","intron_intersect_chrX:91983505|92113246"]
["chrX:92103235|92276059:+","chrX:92102948|92103235:+_chrX:92276059|92276158:+","UN_PCDH11X_LS0010","PCDH11X","protein coding gene","no",2.11,0,0,0.003,32,0,0,"0(0)","STAD","no","TE_intersect_:92102573|chrX|92102573|92105434|HERVH-int:ERV1:LTR|112|-","TE_intersect_:92275399|chrX|92275399|92278360|HERVH-int:ERV1:LTR|101|-","intron_intersect_chrX:91983505|92113246","intron_intersect_chrX:92263143|92287967"]
["chrX:92103705|92105293:-","chrX:92100088|92100700:-_chrX:92103447|92103705:-_chrX:92105293|92105999:-","UN_PCDH11X_LS0012","PCDH11X","protein coding gene","no",5.42,0,0,0.003,28,0,0,"0(0)","TGCT","no","TE_intersect_:92102573|chrX|92102573|92105434|HERVH-int:ERV1:LTR|112|-","TE_intersect_:92102573|chrX|92102573|92105434|HERVH-int:ERV1:LTR|112|-","intron_intersect_chrX:91983505|92113246","intron_intersect_chrX:91983505|92113246"]
["chrX:92104130|92276958:-","chrX:92103984|92104130:-_chrX:92276958|92277034:-","UN_PCDH11X_LS0013","PCDH11X","protein coding gene","no",10.89,0,0,0.004,38,0,0,"0(0)","ESCA;STAD","no","TE_intersect_:92275399|chrX|92275399|92278360|HERVH-int:ERV1:LTR|101|-","TE_intersect_:92102573|chrX|92102573|92105434|HERVH-int:ERV1:LTR|112|-","intron_intersect_chrX:92263143|92287967","intron_intersect_chrX:91983505|92113246"]
["chrX:92105645|92105677:+","chrX:92099100|92105645:+_chrX:92105677|92105908:+","UN_PCDH11X_LS0016","PCDH11X","protein coding gene","no",7.27,0,0,0.005,45,0,0,"0(0)","TGCT","no","TE_intersect_:92105436|chrX|92105436|92105917|LTR7:ERV1:LTR|54|-","TE_intersect_:92105436|chrX|92105436|92105917|LTR7:ERV1:LTR|54|-","intron_intersect_chrX:91983505|92113246","intron_intersect_chrX:91983505|92113246"]
["chrX:92273356|92278635:+","chrX:92273127|92273356:+_chrX:92278635|92278733:+","UN_PCDH11X_LS0029","PCDH11X","protein coding gene","no",2.05,0,0,0.005,51,0,0,"0(0)","ESCA","no","TE_intersect_:92273082|chrX|92273082|92273516|LTR7Y:ERV1:LTR|95|-","TE_intersect_:92278360|chrX|92278360|92278794|LTR7Y:ERV1:LTR|87|-","intron_intersect_chrX:92263143|92287967","intron_intersect_chrX:92263143|92287967"]
["chrX:92273526|92278219:-","chrX:92273094|92273526:-_chrX:92278219|92278318:-","UN_PCDH11X_LS0032","PCDH11X","protein coding gene","no",2.29,0,0,0.002,15,0,0,"0(0)","TGCT","no","TE_intersect_:92275399|chrX|92275399|92278360|HERVH-int:ERV1:LTR|101|-","TE_intersect_:92273516|chrX|92273516|92273886|HERVH-int:ERV1:LTR|79|-","intron_intersect_chrX:92263143|92287967","intron_intersect_chrX:92263143|92287967"]
["chrX:92387556|92387735:+","chrX:92387519|92387556:+_chrX:92387735|92387933:+_chrX:92468299|92468322:+_chrX:92618264|92623230:+","UN_PCDH11X_LS0034","PCDH11X","protein coding gene","no",0.89,0,0,0.001,12,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chrX:92288002|92387735","exon_intersect_chrX:92387735|92387933"]
["chrX:93674752|93677916:+","chrX:93674017|93674274:+_chrX:93674681|93674752:+_chrX:93677916|93677950:+_chrX:93698397|93698485:+_chrX:93709317|93712265:+","UN_FAM133A_LS0003","FAM133A","protein coding gene","no",3.31,0,0,0.011,103,0,0,"0(0)","LGG;PCPG","no","NA","TE_intersect_:93677499|chrX|93677499|93678375|L1ME1:L1:LINE|209|-","intron_intersect_chrX:93674752|93698397","intron_intersect_chrX:93674752|93698397"]
["chrX:93677950|93698397:+","chrX:93674017|93674274:+_chrX:93674681|93674752:+_chrX:93677916|93677950:+_chrX:93698397|93698485:+_chrX:93709317|93712265:+","UN_FAM133A_LS0004","FAM133A","protein coding gene","no",2.87,0,0,0.014,133,0,0,"0(0)","LGG;PCPG","no","TE_intersect_:93677499|chrX|93677499|93678375|L1ME1:L1:LINE|209|-","TE_intersect_:93698397|chrX|93698397|93698820|L2-3_Crp:L2:LINE|352|-","intron_intersect_chrX:93674752|93698397","exon_intersect_chrX:93698397|93698485"]
["chrX:93698439|93709317:+","chrX:93696174|93696332:+_chrX:93698397|93698439:+_chrX:93709317|93712274:+","UN_FAM133A_LS0006","FAM133A","protein coding gene","no",3.63,0,0,0.025,240,0,0,"0(0)","ESCA;LUAD;PCPG;SKCM;TGCT","no","TE_intersect_:93698397|chrX|93698397|93698820|L2-3_Crp:L2:LINE|352|-","NA","exon_intersect_chrX:93698397|93698485","exon_intersect_chrX:93709317|93712274"]
["chrX:93708274|93709317:+","chrX:93708260|93708274:+_chrX:93709317|93712269:+","UN_FAM133A_LS0011","FAM133A","protein coding gene","no",1.96,0,0,0.004,43,0,0,"0(0)","PCPG","no","TE_intersect_:93708233|chrX|93708233|93708462|L2b:L2:LINE|313|-","NA","intron_intersect_chrX:93698485|93709317","exon_intersect_chrX:93709317|93712274"]
["chrX:93939839|93958477:+","chrX:93939760|93939839:+_chrX:93958477|93958583:+_chrX:94004782|94004882:+_chrX:94024849|94026680:+","UN_RF00019_UP_LS2124","RF00019","small non-coding RNA gene","no",3.64,0,0,0.005,45,0,0,"0(0)","OV","no","TE_intersect_:93939741|chrX|93939741|93945900|L1PA2:L1:LINE|29|+","TE_intersect_:93957817|chrX|93957817|93963456|HERVL-int:ERVL:LTR|95|+","NA","NA"]
["chrX:93958583|94024849:+","chrX:93955801|93955982:+_chrX:93958477|93958583:+_chrX:94024849|94026619:+","UN_RF00019_UP_LS2129","RF00019","small non-coding RNA gene","no",3.07,0,0,0.005,44,0,0,"0(0)","OV","no","TE_intersect_:93957817|chrX|93957817|93963456|HERVL-int:ERVL:LTR|95|+","NA","NA","NA"]
["chrX:9405190|9411936:+","chrX:9403482|9405190:+_chrX:9411936|9414566:+","UN_AC073488.2_UP_LS0001","AC073488.2","pseudogene","no",2.06,0,0,0.007,64,0,0,"0(0)","TGCT","no","NA","TE_intersect_:9411859|chrX|9411859|9411975|5S:rRNA:rRNA|219|+","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:9405512|9408420:-","chrX:9405127|9405512:-_chrX:9408420|9408526:-","UN_FAM9B_UP_LS0009","FAM9B","protein coding gene","no",5.01,0,0,0.003,25,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:9406411|9408274:-","chrX:9406312|9406411:-_chrX:9408274|9408641:-","UN_FAM9B_UP_LS0011","FAM9B","protein coding gene","no",7.61,0,0,0.005,46,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:94066019|94067139:+","chrX:94065413|94065459:+_chrX:94065898|94066019:+_chrX:94067139|94067368:+","UN_RF00019_UP_LS2135","RF00019","small non-coding RNA gene","no",1.72,0,0,0.002,23,0,0,"0(0)","OV","no","TE_intersect_:94066007|chrX|94066007|94066126|MER5A:hAT-Charlie:DNA|325|+","TE_intersect_:94066970|chrX|94066970|94067501|LTR38:ERV1:LTR|235|+","NA","NA"]
["chrX:9407166|9411936:+","chrX:9403482|9407166:+_chrX:9411936|9414732:+","UN_AC073488.2_UP_LS0002","AC073488.2","pseudogene","no",3.31,0,0,0.007,67,0,0,"0(0)","TGCT","no","NA","TE_intersect_:9411859|chrX|9411859|9411975|5S:rRNA:rRNA|219|+","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:9410725|9413748:+","chrX:9403442|9410725:+_chrX:9413748|9414634:+","UN_AC073488.6_UP_LS0001","AC073488.6","pseudogene","no",5.28,0,0,0.011,102,0,0,"0(0)","TGCT;UCS","no","NA","NA","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:9412702|9413748:+","chrX:9403509|9405190:+_chrX:9411936|9412702:+_chrX:9413748|9413806:+","UN_AC073488.6_UP_LS0002","AC073488.6","pseudogene","no",1.72,0,0,0.004,37,0,0,"0(0)","OV","no","NA","NA","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:9413309|9414355:-","chrX:9413118|9413309:-_chrX:9414355|9414494:-","UN_FAM9B_UP_LS0016","FAM9B","protein coding gene","no",9.52,0,0,0.004,34,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:9414458|9414547:-","chrX:9413118|9413309:-_chrX:9414355|9414458:-_chrX:9414547|9414589:-","UN_AC073488.6_LS0001","AC073488.6","pseudogene","no",3.03,0,0,0.002,16,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrX:9403720|9414566","exon_intersect_chrX:9403720|9414566"]
["chrX:9414741|9438508:-","chrX:9409043|9409204:-_chrX:9413158|9413309:-_chrX:9414355|9414458:-_chrX:9414547|9414741:-_chrX:9438508|9438599:-_chrX:9443367|9443536:-","UN_FAM9B_UP_LS0017","FAM9B","protein coding gene","no",7.13,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:94495539|94497858:+","chrX:94495296|94495539:+_chrX:94497858|94501440:+","UN_AL022161.1_UP_LS0008","AL022161.1","pseudogene","no",4.55,0,0,0.008,73,0,0,"0(0)","OV;PAAD","no","TE_intersect_:94493111|chrX|94493111|94495855|HERVK22-int:ERVK:LTR|100|+","TE_intersect_:94496497|chrX|94496497|94497969|HERVK22-int:ERVK:LTR|92|+","NA","NA"]
["chrX:94570146|94570783:-","chrX:94565902|94570146:-_chrX:94570783|94573901:-","UN_RNU6-332P_UP_LS0069","RNU6-332P","small non-coding RNA gene","no",1.66,0,0,0.003,32,0,0,"0(0)","KICH","no","TE_intersect_:94569969|chrX|94569969|94570858|MER4-int:ERV1:LTR|144|-","TE_intersect_:94569969|chrX|94569969|94570858|MER4-int:ERV1:LTR|144|-","NA","NA"]
["chrX:94698020|94746875:+","chrX:94697805|94698020:+_chrX:94746875|94746970:+","UN_AL022161.1_UP_LS0009","AL022161.1","pseudogene","no",3.75,0,0,0.002,22,0,0,"0(0)","CHOL","no","NA","TE_intersect_:94746675|chrX|94746675|94747054|THE1C:ERVL-MaLR:LTR|137|+","NA","NA"]
["chrX:96430093|96440654:-","chrX:96425343|96429348:-_chrX:96429983|96430093:-_chrX:96440654|96440702:-_chrX:96540113|96540275:-","UN_RN7SKP194_UP_LS0003","RN7SKP194","small non-coding RNA gene","no",3.3,0,0,0.005,47,0,0,"0(0)","LIHC","no","NA","NA","NA","NA"]
["chrX:96440702|96465761:-","chrX:96421807|96421873:-_chrX:96429983|96430093:-_chrX:96440654|96440702:-_chrX:96465761|96465871:-","UN_RN7SKP194_UP_LS0005","RN7SKP194","small non-coding RNA gene","no",2.47,0,0,0.006,56,0,0,"0(0)","LIHC","no","TE_intersect_:96465708|chrX|96465708|96466055|THE1D:ERVL-MaLR:LTR|134|-","NA","NA","NA"]
["chrX:96503142|96504884:+","chrX:96500881|96501132:+_chrX:96503016|96503142:+_chrX:96504884|96505276:+","UN_AL606530.1_UP_LS0010","AL606530.1","pseudogene","no",2.94,0,0,0.006,55,0,0,"0(0)","KIRC","no","NA","NA","NA","NA"]
["chrX:96503142|96517030:+","chrX:96500883|96501132:+_chrX:96503016|96503142:+_chrX:96517030|96518014:+","UN_AL606530.1_UP_LS0012","AL606530.1","pseudogene","no",5.53,0,0,0.013,126,0,0,"0(0)","KIRC","no","NA","TE_intersect_:96516851|chrX|96516851|96517343|MLT1F:ERVL-MaLR:LTR|234|+","NA","NA"]
["chrX:97159661|97247715:+","chrX:97159495|97159661:+_chrX:97247715|97247839:+_chrX:97348116|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469835:+","UN_DIAPH2_LS0045","DIAPH2","protein coding gene","no",4.44,0,0,0.007,65,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:97141794|97247715","exon_intersect_chrX:97247715|97247841"]
["chrX:97160370|97161446:+","chrX:97160147|97160370:+_chrX:97161446|97161543:+_chrX:97247715|97247839:+_chrX:97348116|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469804:+","UN_DIAPH2_LS0046","DIAPH2","protein coding gene","no",2.35,0,0,0.001,14,0,0,"0(0)","TGCT","no","TE_intersect_:97159909|chrX|97159909|97160444|LTR26:ERV1:LTR|248|-","TE_intersect_:97161402|chrX|97161402|97161614|AluSx3:Alu:SINE|165|-","intron_intersect_chrX:97141794|97247715","intron_intersect_chrX:97141794|97247715"]
["chrX:97160370|97247715:+","chrX:97160149|97160370:+_chrX:97247715|97247839:+_chrX:97348116|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469835:+","UN_DIAPH2_LS0047","DIAPH2","protein coding gene","no",6.78,0,0,0.003,30,0,0,"0(0)","TGCT","no","TE_intersect_:97159909|chrX|97159909|97160444|LTR26:ERV1:LTR|248|-","NA","intron_intersect_chrX:97141794|97247715","exon_intersect_chrX:97247715|97247841"]
["chrX:97161543|97247715:+","chrX:97160147|97160370:+_chrX:97161446|97161543:+_chrX:97247715|97247839:+_chrX:97348116|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469804:+","UN_DIAPH2_LS0048","DIAPH2","protein coding gene","no",4.1,0,0,0.002,23,0,0,"0(0)","TGCT","no","TE_intersect_:97161402|chrX|97161402|97161614|AluSx3:Alu:SINE|165|-","NA","intron_intersect_chrX:97141794|97247715","exon_intersect_chrX:97247715|97247841"]
["chrX:97237988|97247715:+","chrX:97237674|97237988:+_chrX:97247715|97247839:+_chrX:97348116|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469838:+","UN_DIAPH2_LS0049","DIAPH2","protein coding gene","no",6.48,0,0,0.012,112,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:97141794|97247715","exon_intersect_chrX:97247715|97247841"]
["chrX:9725976|9739485:-","chrX:9725402|9725840:-_chrX:9725948|9725976:-_chrX:9739485|9739719:-_chrX:9741338|9741455:-_chrX:9743565|9743673:-_chrX:9746044|9746153:-_chrX:9748574|9748666:-_chrX:9759332|9759426:-_chrX:9760717|9760826:-_chrX:9778578|9778665:-_chrX:9786242|9786307:-","UN_TBL1X_LS0046","TBL1X","protein coding gene","no",7.58,0.51,0,0.054,513,0.016,11,"0(0)","UVM","no","NA","NA","exon_intersect_chrX:9739485|9739719","intron_intersect_chrX:9725840|9738229"]
["chrX:97310658|97315690:+","chrX:97310576|97310658:+_chrX:97315690|97315893:+_chrX:97346806|97346949:+_chrX:97348081|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469837:+","UN_DIAPH2_LS0070","DIAPH2","protein coding gene","no",0.72,0,0,0.004,37,0,0,"0(0)","TGCT","no","TE_intersect_:97310220|chrX|97310220|97310731|L2a:L2:LINE|269|-","TE_intersect_:97315690|chrX|97315690|97315756|MIRb:MIR:SINE|288|+","intron_intersect_chrX:97247841|97341046","intron_intersect_chrX:97247841|97341046"]
["chrX:97310658|97326578:+","chrX:97310542|97310658:+_chrX:97326578|97326722:+_chrX:97348118|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469837:+","UN_DIAPH2_LS0071","DIAPH2","protein coding gene","no",1.38,0,0,0.001,12,0,0,"0(0)","TGCT","no","TE_intersect_:97310220|chrX|97310220|97310731|L2a:L2:LINE|269|-","NA","intron_intersect_chrX:97247841|97341046","intron_intersect_chrX:97247841|97341046"]
["chrX:97310658|97346806:+","chrX:97310569|97310658:+_chrX:97346806|97346949:+_chrX:97348081|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469835:+","UN_DIAPH2_LS0072","DIAPH2","protein coding gene","no",2.06,0,0,0.005,45,0,0,"0(0)","TGCT","no","TE_intersect_:97310220|chrX|97310220|97310731|L2a:L2:LINE|269|-","TE_intersect_:97346473|chrX|97346473|97346987|MER39:ERV1:LTR|240|-","intron_intersect_chrX:97247841|97341046","intron_intersect_chrX:97341344|97348116"]
["chrX:97315893|97346806:+","chrX:97310576|97310658:+_chrX:97315690|97315893:+_chrX:97346806|97346949:+_chrX:97348081|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469837:+","UN_DIAPH2_LS0079","DIAPH2","protein coding gene","no",3.67,0,0,0.003,32,0,0,"0(0)","TGCT","no","NA","TE_intersect_:97346473|chrX|97346473|97346987|MER39:ERV1:LTR|240|-","intron_intersect_chrX:97247841|97341046","intron_intersect_chrX:97341344|97348116"]
["chrX:97315893|97348081:+","chrX:97310566|97310658:+_chrX:97315690|97315893:+_chrX:97348081|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469835:+","UN_DIAPH2_LS0080","DIAPH2","protein coding gene","no",6.33,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:97247841|97341046","intron_intersect_chrX:97341344|97348116"]
["chrX:97326722|97348118:+","chrX:97310542|97310658:+_chrX:97326578|97326722:+_chrX:97348118|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469837:+","UN_DIAPH2_LS0082","DIAPH2","protein coding gene","no",2.81,0,0,0.002,15,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:97247841|97341046","exon_intersect_chrX:97348116|97348280"]
["chrX:97346949|97348081:+","chrX:97310576|97310658:+_chrX:97315690|97315893:+_chrX:97346806|97346949:+_chrX:97348081|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97469694|97469837:+","UN_DIAPH2_LS0084","DIAPH2","protein coding gene","no",5.21,0,0,0.005,50,0,0,"0(0)","TGCT","no","TE_intersect_:97346473|chrX|97346473|97346987|MER39:ERV1:LTR|240|-","NA","intron_intersect_chrX:97341344|97348116","intron_intersect_chrX:97341344|97348116"]
["chrX:97347002|97348118:+","chrX:97346950|97347002:+_chrX:97348118|97348280:+_chrX:97383909|97384044:+_chrX:97429650|97429745:+_chrX:97599253|97604984:+","UN_DIAPH2_LS0085","DIAPH2","protein coding gene","no",3.08,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrX:97341344|97348116","exon_intersect_chrX:97348116|97348280"]
["chrX:97584224|97602811:-","chrX:97528299|97529066:-_chrX:97533312|97533429:-_chrX:97565876|97566018:-_chrX:97584127|97584224:-_chrX:97602811|97603011:-_chrX:97617112|97617314:-","UN_DIAPH2_LS0102","DIAPH2","protein coding gene","no",2.1,0,0,0.004,43,0,0,"0(0)","STAD","no","TE_intersect_:97602178|chrX|97602178|97603275|MLT1D-int:ERVL-MaLR:LTR|255|-","NA","exon_intersect_chrX:97599253|97604997","intron_intersect_chrX:97564533|97599253"]
["chrX:97843811|97846516:+","chrX:97841622|97843811:+_chrX:97846516|97850884:+","UN_AL354685.1_UP_LS0004","AL354685.1","pseudogene","no",12.23,0,0,0.003,32,0,0,"0(0)","TGCT","no","TE_intersect_:97841857|chrX|97841857|97849054|HERV-Fc2-int:ERV1:LTR|10|+","TE_intersect_:97841857|chrX|97841857|97849054|HERV-Fc2-int:ERV1:LTR|10|+","NA","NA"]
["chrX:9830711|9831581:-","chrX:9829771|9830711:-_chrX:9831581|9833389:-_chrX:9849028|9849429:-","UN_SHROOM2_LS0010","SHROOM2","protein coding gene","no",17.5,0,0,0.003,33,0,0,"0(0)","KIRP","no","TE_intersect_:9831385|chrX|9831385|9831680|AluSp:Alu:SINE|75|+","TE_intersect_:9830584|chrX|9830584|9830881|AluSp:Alu:SINE|68|-","intron_intersect_chrX:9819469|9865093","intron_intersect_chrX:9819469|9865093"]
["chrX:98308450|98335698:+","chrX:98308343|98308450:+_chrX:98335698|98335837:+_chrX:98358371|98361249:+","UN_EEF1A1P15_UP_LS0002","EEF1A1P15","pseudogene","no",2.6,0,0,0.003,32,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chrX:98335837|98358371:+","chrX:98308343|98308450:+_chrX:98335698|98335837:+_chrX:98358371|98361249:+","UN_EEF1A1P15_UP_LS0005","EEF1A1P15","pseudogene","no",4.84,0,0,0.003,32,0,0,"0(0)","KICH","no","NA","NA","NA","NA"]
["chrX:98352101|98380463:-","chrX:98201239|98201764:-_chrX:98352016|98352101:-_chrX:98380463|98380982:-","UN_AL357312.1_UP_LS0003","AL357312.1","pseudogene","no",3.06,0,0,0.008,73,0,0,"0(0)","LIHC;TGCT","no","NA","NA","NA","NA"]
["chrX:98359214|98360615:+","chrX:98308343|98308450:+_chrX:98358371|98359214:+_chrX:98360615|98361249:+","UN_EEF1A1P15_UP_LS0008","EEF1A1P15","pseudogene","no",6.12,0,0,0.004,39,0,0,"0(0)","KICH","no","TE_intersect_:98358380|chrX|98358380|98359817|L1P1:L1:LINE|29|+","TE_intersect_:98360471|chrX|98360471|98360788|MLT2C1:ERVL:LTR|166|+","NA","NA"]
["chrX:98510176|98514172:-","chrX:98508220|98510176:-_chrX:98514172|98514308:-_chrX:98515561|98515665:-_chrX:98522367|98522462:-_chrX:98527453|98528302:-","UN_AL157778.1_LS0001","AL157778.1","lncRNA gene","no",3.06,0,0,0.001,14,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:98514308|98515561:-","chrX:98508220|98510176:-_chrX:98514172|98514308:-_chrX:98515561|98515665:-_chrX:98522367|98522462:-_chrX:98527453|98528302:-","UN_AL157778.1_LS0002","AL157778.1","lncRNA gene","no",2.77,0,0,0.001,13,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:98573932|98644528:+","chrX:98573886|98573932:+_chrX:98644528|98644574:+_chrX:98864611|98865564:+","AL157778.1_LS002","AL157778.1","lncRNA gene","no",3.4,0,0,0.015,140,0,0,"0(0)","TGCT","yes","TE_intersect_:98573437|chrX|98573437|98574092|LTR49:ERV1:LTR|197|+","TE_intersect_:98644294|chrX|98644294|98644817|L2a:L2:LINE|306|+","intron_intersect_chrX:98573932|98578986","exon_intersect_chrX:98644528|98644574"]
["chrX:98842001|98864611:+","chrX:98573875|98573932:+_chrX:98644528|98644574:+_chrX:98731531|98731577:+_chrX:98841941|98842001:+_chrX:98864611|98865591:+","UN_AL157778.1_LS0018","AL157778.1","lncRNA gene","no",2.01,0,0,0.008,77,0,0,"0(0)","TGCT","no","TE_intersect_:98841667|chrX|98841667|98842277|L1MA4:L1:LINE|181|-","TE_intersect_:98864567|chrX|98864567|98864928|MER41-int:ERV1:LTR|109|+","intron_intersect_chrX:98785124|98864611","exon_intersect_chrX:98864611|98864984"]
["chrX:99372726|99450512:+","chrX:99372399|99372726:+_chrX:99450512|99450638:+","UN_AL137843.1_UP_LS0008","AL137843.1","pseudogene","no",2.14,0,0,0.007,69,0,0,"0(0)","TGCT","no","NA","TE_intersect_:99449704|chrX|99449704|99452027|L1M4c:L1:LINE|244|-","NA","NA"]
["chrX:99653872|99658426:+","chrX:99372335|99372726:+_chrX:99653827|99653872:+_chrX:99658426|99658435:+","UN_RF00402_UP_LS0058","RF00402","small non-coding RNA gene","no",14.25,0,0,0.002,17,0,0,"0(0)","TGCT","no","TE_intersect_:99653627|chrX|99653627|99653961|MLT1I:ERVL-MaLR:LTR|251|+","TE_intersect_:99658345|chrX|99658345|99658520|MIRb:MIR:SINE|277|-","NA","NA"]
["chrX:99658721|99659364:+","chrX:99653422|99653872:+_chrX:99658426|99658721:+_chrX:99659364|99659503:+_chrX:99660818|99661722:+","UN_RF00402_UP_LS0060","RF00402","small non-coding RNA gene","no",18.83,0,0,0.002,17,0,0,"0(0)","TGCT","no","NA","TE_intersect_:99659242|chrX|99659242|99659483|MIR:MIR:SINE|304|-","NA","NA"]
["chrX:99659503|99660818:+","chrX:99653422|99653872:+_chrX:99658426|99658721:+_chrX:99659364|99659503:+_chrX:99660818|99661722:+","UN_RF00402_UP_LS0061","RF00402","small non-coding RNA gene","no",9.68,0,0,0.002,23,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrX:99660890|99711983:+","chrX:99372338|99372726:+_chrX:99450512|99450583:+_chrX:99653827|99653872:+_chrX:99658426|99658721:+_chrX:99659364|99659503:+_chrX:99660818|99660890:+_chrX:99711983|99712781:+","UN_RF00402_UP_LS0063","RF00402","small non-coding RNA gene","no",2.62,0,0,0.003,30,0,0,"0(0)","TGCT","no","NA","NA","NA","NA"]
["chrY:11124319|11212744:-","chrY:11124146|11124319:-_chrY:11212744|11212802:-_chrY:11214938|11215007:-","UN_AC140113.1_UP_LS0003","AC140113.1","pseudogene","no",4.76,0,0,0.024,229,0,0,"0(0)","ESCA;OV;PCPG;SKCM;STAD","no","NA","TE_intersect_:11124039|chrY|11124039|11124351|AluSp:Alu:SINE|109|+","NA","NA"]
["chrY:11155884|11162909:-","chrY:11155803|11155884:-_chrY:11162909|11163137:-_chrY:11212744|11212802:-_chrY:11214938|11215016:-","UN_AC140113.1_UP_LS0007","AC140113.1","pseudogene","no",3.52,0,0,0.005,52,0,0,"0(0)","OV","no","NA","NA","NA","intron_intersect_chrY:11155878|11156568"]
["chrY:11187798|11187899:+","chrY:11187648|11187798:+_chrY:11187899|11187998:+","UN_DUX4L16_UP_LS0001","DUX4L16","pseudogene","no",10.68,0.21,0,0.009,82,0.003,2,"0(0)","KICH","no","TE_intersect_:11187769|chrY|11187769|11187864|L1MCa:L1:LINE|247|+","TE_intersect_:11187868|chrY|11187868|11188240|L1MB4:L1:LINE|162|+","NA","NA"]
["chrY:12089285|12098016:-","chrY:12087507|12089285:-_chrY:12098016|12098099:-_chrY:12109966|12110012:-","UN_ASS1P6_UP_LS0001","ASS1P6","pseudogene","no",3.63,0,0,0.006,59,0,0,"0(0)","SARC;SKCM;UVM","no","TE_intersect_:12097566|chrY|12097566|12098124|L1PA10:L1:LINE|102|+","TE_intersect_:12089067|chrY|12089067|12089450|MLT1D:ERVL-MaLR:LTR|216|-","NA","NA"]
["chrY:12098099|12109966:-","chrY:12087507|12089285:-_chrY:12098016|12098099:-_chrY:12109966|12110012:-","UN_ASS1P6_UP_LS0003","ASS1P6","pseudogene","no",3.71,0,0,0.006,54,0,0,"0(0)","SKCM;UVM","no","TE_intersect_:12109882|chrY|12109882|12110223|THE1B:ERVL-MaLR:LTR|140|-","TE_intersect_:12097566|chrY|12097566|12098124|L1PA10:L1:LINE|102|+","NA","NA"]
["chrY:12664541|12664640:+","chrY:12663256|12664541:+_chrY:12664640|12664686:+_chrY:12686513|12686606:+_chrY:12702010|12702055:+_chrY:12709388|12709543:+_chrY:12714639|12714789:+_chrY:12720589|12720737:+_chrY:12722108|12722187:+_chrY:12725113|12725225:+_chrY:12726575|12726793:+_chrY:12735612|12735727:+_chrY:12735998|12736249:+_chrY:12736411|12736549:+_chrY:12738157|12738309:+_chrY:12739525|12739629:+_chrY:12757192|12757398:+_chrY:12758506|12758642:+_chrY:12760484|12760617:+_chrY:12771068|12771155:+_chrY:12773583|12773925:+_chrY:12775471|12775566:+_chrY:12776649|12776860:+_chrY:12778019|12778259:+_chrY:12778606|12778755:+_chrY:12779526|12779646:+_chrY:12786203|12786333:+_chrY:12786522|12786800:+_chrY:12790407|12790532:+_chrY:12791499|12791624:+_chrY:12793032|12793201:+_chrY:12810179|12810287:+_chrY:12810672|12810818:+_chrY:12811635|12811781:+_chrY:12812830|12813052:+_chrY:12816124|12816344:+_chrY:12818420|12818610:+_chrY:12833688|12833861:+_chrY:12837911|12838052:+_chrY:12839864|12840614:+_chrY:12841010|12841133:+_chrY:12842240|12842465:+_chrY:12843064|12843193:+_chrY:12846333|12846518:+_chrY:12846933|12847153:+_chrY:12847239|12847327:+_chrY:12856340|12856496:+_chrY:12856633|12856845:+_chrY:12857566|12857661:+_chrY:12859279|12860839:+","UN_TTTY15_LS0007","TTTY15","lncRNA gene","no",1.85,0,0,0.005,47,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chrY:12662706|12664640","exon_intersect_chrY:12664640|12664686"]
["chrY:12909407|12912727:+","chrY:12904849|12904981:+_chrY:12907537|12907594:+_chrY:12909360|12909407:+_chrY:12912727|12913062:+_chrY:12913718|12913801:+","UN_DDX3Y_LS0004","DDX3Y","protein coding gene","no",14.6,0,0,0.001,14,0,0,"0(0)","LAML","no","NA","NA","exon_intersect_chrY:12909360|12909696","exon_intersect_chrY:12912640|12913062"]
["chrY:13790966|13805782:+","chrY:13753098|13753159:+_chrY:13754640|13754789:+_chrY:13790919|13790966:+_chrY:13805782|13806228:+","UN_ANOS2P_LS0005","ANOS2P","pseudogene","no",2.16,0,0,0.002,23,0,0,"0(0)","TGCT","no","NA","TE_intersect_:13805753|chrY|13805753|13806076|AluSx:Alu:SINE|161|-","intron_intersect_chrY:13790966|13854444","intron_intersect_chrY:13790966|13854444"]
["chrY:14622591|14824188:+","chrY:14622021|14622591:+_chrY:14824188|14824373:+_chrY:14829730|14830519:+_chrY:14840413|14848328:+","UN_NLGN4Y_LS0008","NLGN4Y","protein coding gene","no",0.82,0,0,0.001,11,0,0,"0(0)","GBM","no","NA","NA","intron_intersect_chrY:14622591|14639096","exon_intersect_chrY:14824188|14824373"]
["chrY:15456840|15460294:+","chrY:15456262|15456840:+_chrY:15460294|15460375:+_chrY:15460699|15461683:+","UN_STSP1_UP_LS0002","STSP1","pseudogene","no",1.86,0,0,0.006,61,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chrY:18630339|18636075:+","chrY:18630051|18630339:+_chrY:18636075|18636169:+_chrY:18637289|18640730:+","UN_RAB9AP4_UP_LS0004","RAB9AP4","pseudogene","no",10.01,0,0,0.007,71,0,0,"0(0)","TGCT","no","TE_intersect_:18630292|chrY|18630292|18630723|HUERS-P3b-int:ERV1:LTR|247|+","TE_intersect_:18634527|chrY|18634527|18636394|HUERS-P3b-int:ERV1:LTR|181|+","NA","NA"]
["chrY:18636169|18637289:+","chrY:18630051|18630339:+_chrY:18636075|18636169:+_chrY:18637289|18640730:+","UN_RAB9AP4_UP_LS0005","RAB9AP4","pseudogene","no",8.95,0,0,0.009,85,0,0,"0(0)","BLCA;TGCT","no","TE_intersect_:18634527|chrY|18634527|18636394|HUERS-P3b-int:ERV1:LTR|181|+","TE_intersect_:18636431|chrY|18636431|18637481|HUERS-P3b-int:ERV1:LTR|181|+","NA","NA"]
["chrY:18932841|19041370:-","chrY:18872503|18872834:-_chrY:18877068|18877205:-_chrY:18932743|18932841:-_chrY:19041370|19041552:-_chrY:19068724|19068798:-_chrY:19077045|19077416:-","UN_TTTY14_LS0021","TTTY14","lncRNA gene","no",4.66,0,0,0.002,20,0,0,"0(0)","TGCT","no","TE_intersect_:19041345|chrY|19041345|19041622|HERVIP10FH-int:ERV1:LTR|122|-","TE_intersect_:18932708|chrY|18932708|18932845|FLAM_A:Alu:SINE|182|-","intron_intersect_chrY:19019087|19041498","intron_intersect_chrY:18932841|18985175"]
["chrY:19041586|19041752:-","chrY:18872501|18872834:-_chrY:18877068|18877205:-_chrY:18932743|18932841:-_chrY:19041370|19041586:-_chrY:19041752|19042435:-","UN_TTTY14_LS0089","TTTY14","lncRNA gene","no",3.46,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:19041625|chrY|19041625|19042102|LTR10F:ERV1:LTR|108|-","TE_intersect_:19041345|chrY|19041345|19041622|HERVIP10FH-int:ERV1:LTR|122|-","intron_intersect_chrY:19041586|19043163","intron_intersect_chrY:19041586|19043163"]
["chrY:19869103|19883724:+","chrY:19868665|19869103:+_chrY:19883724|19884156:+","UN_ZNF885P_UP_LS0005","ZNF885P","pseudogene","no",4.73,0,0,0.006,62,0,0,"0(0)","GBM","no","TE_intersect_:19869010|chrY|19869010|19869702|HERVK22-int:ERVK:LTR|177|+","TE_intersect_:19883431|chrY|19883431|19884187|MER4E:ERV1:LTR|123|+","NA","NA"]
["chrY:20521300|20524268:-","chrY:20495496|20507456:-_chrY:20518271|20520498:-_chrY:20521132|20521300:-_chrY:20524268|20524440:-_chrY:20575106|20575530:-","UN_TTTY10_UP_LS0002","TTTY10","lncRNA gene","no",7.14,0,0,0.002,17,0,0,"0(0)","LAML","no","NA","NA","NA","NA"]
["chrY:21138868|21138954:+","chrY:21138548|21138868:+_chrY:21138954|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21221096:+","UN_AC010086.1_UP_LS0002","AC010086.1","pseudogene","no",3.07,0,0,0.001,12,0,0,"0(0)","MESO","no","TE_intersect_:21138825|chrY|21138825|21138927|LTR25-int:ERV1:LTR|167|+","TE_intersect_:21138925|chrY|21138925|21141259|LTR25-int:ERV1:LTR|236|+","NA","NA"]
["chrY:21138868|21144780:+","chrY:21138539|21138868:+_chrY:21144780|21144871:+_chrY:21148176|21148226:+_chrY:21148419|21148513:+_chrY:21151589|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21173299:+","UN_AC010086.1_UP_LS0003","AC010086.1","pseudogene","no",3.92,0,0,0.003,27,0,0,"0(0)","MESO","no","TE_intersect_:21138825|chrY|21138825|21138927|LTR25-int:ERV1:LTR|167|+","TE_intersect_:21142843|chrY|21142843|21146334|LTR19-int:ERV1:LTR|123|+","NA","NA"]
["chrY:21138868|21148419:+","chrY:21138632|21138868:+_chrY:21148419|21148513:+_chrY:21151589|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21173229:+","UN_AC010086.1_UP_LS0005","AC010086.1","pseudogene","no",1.81,0,0,0.001,11,0,0,"0(0)","MESO","no","TE_intersect_:21138825|chrY|21138825|21138927|LTR25-int:ERV1:LTR|167|+","TE_intersect_:21147737|chrY|21147737|21149246|LTR25-int:ERV1:LTR|162|+","NA","NA"]
["chrY:21138868|21148542:+","chrY:21138573|21138868:+_chrY:21148542|21148595:+_chrY:21151589|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21172976:+","UN_AC010086.1_UP_LS0006","AC010086.1","pseudogene","no",5.06,0,0,0.001,12,0,0,"0(0)","MESO","no","TE_intersect_:21138825|chrY|21138825|21138927|LTR25-int:ERV1:LTR|167|+","TE_intersect_:21147737|chrY|21147737|21149246|LTR25-int:ERV1:LTR|162|+","NA","NA"]
["chrY:21148226|21148419:+","chrY:21138548|21148226:+_chrY:21148419|21148595:+_chrY:21151589|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21203030:+_chrY:21203459|21221096:+","UN_AC010086.1_UP_LS0009","AC010086.1","pseudogene","no",5.35,0.09,0,0.005,52,0.001,1,"0(0)","LAML","no","TE_intersect_:21147737|chrY|21147737|21149246|LTR25-int:ERV1:LTR|162|+","TE_intersect_:21147737|chrY|21147737|21149246|LTR25-int:ERV1:LTR|162|+","NA","NA"]
["chrY:21148513|21151589:+","chrY:21138539|21138868:+_chrY:21144780|21144871:+_chrY:21148176|21148226:+_chrY:21148419|21148513:+_chrY:21151589|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21173299:+","UN_AC010086.1_UP_LS0010","AC010086.1","pseudogene","no",6.88,0,0,0.007,64,0,0,"0(0)","LAML;MESO","no","TE_intersect_:21147737|chrY|21147737|21149246|LTR25-int:ERV1:LTR|162|+","TE_intersect_:21151581|chrY|21151581|21152048|LTR10B1:ERV1:LTR|250|-","NA","NA"]
["chrY:21148595|21151589:+","chrY:21138548|21148226:+_chrY:21148419|21148595:+_chrY:21151589|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21203030:+_chrY:21203459|21221096:+","UN_AC010086.1_UP_LS0011","AC010086.1","pseudogene","no",9.74,0.09,0,0.003,31,0.001,1,"0(0)","LAML","no","TE_intersect_:21147737|chrY|21147737|21149246|LTR25-int:ERV1:LTR|162|+","TE_intersect_:21151581|chrY|21151581|21152048|LTR10B1:ERV1:LTR|250|-","NA","NA"]
["chrY:21151642|21152839:+","chrY:21138548|21138868:+_chrY:21138954|21151642:+_chrY:21152839|21152973:+_chrY:21169956|21221096:+","UN_AC010086.1_UP_LS0012","AC010086.1","pseudogene","no",5.64,0.08,0,0.011,105,0.001,1,"0(0)","LAML","no","TE_intersect_:21151581|chrY|21151581|21152048|LTR10B1:ERV1:LTR|250|-","TE_intersect_:21152048|chrY|21152048|21153817|HERVIP10B3-int:ERV1:LTR|237|-","NA","NA"]
["chrY:21243249|21248977:-","chrY:21240255|21243249:-_chrY:21248977|21249150:-_chrY:21296155|21296220:-_chrY:21318921|21319032:-_chrY:21346475|21346585:-_chrY:21404629|21404788:-","UN_NEFLP1_UP_LS0002","NEFLP1","pseudogene","no",2.7,0,0,0.005,50,0,0,"0(0)","LAML","no","TE_intersect_:21240701|chrY|21240701|21249208|HERV3-int:ERV1:LTR|275|-","TE_intersect_:21240701|chrY|21240701|21249208|HERV3-int:ERV1:LTR|275|-","NA","NA"]
["chrY:21249150|21296155:-","chrY:21240255|21243249:-_chrY:21248977|21249150:-_chrY:21296155|21296220:-_chrY:21318921|21319032:-_chrY:21346475|21346585:-_chrY:21404629|21404788:-","UN_NEFLP1_UP_LS0004","NEFLP1","pseudogene","no",3.19,0,0,0.005,48,0,0,"0(0)","LAML","no","TE_intersect_:21296073|chrY|21296073|21296452|THE1C:ERVL-MaLR:LTR|222|-","TE_intersect_:21240701|chrY|21240701|21249208|HERV3-int:ERV1:LTR|275|-","NA","NA"]
["chrY:21250361|21250550:+","chrY:21222104|21250361:+_chrY:21250550|21250708:+_chrY:21253123|21253193:+_chrY:21253481|21283716:+","UN_AC010086.1_UP_LS0017","AC010086.1","pseudogene","no",2,0,0,0.006,54,0,0,"0(0)","ESCA;LAML","no","TE_intersect_:21249982|chrY|21249982|21251765|L1P3:L1:LINE|174|-","TE_intersect_:21249982|chrY|21249982|21251765|L1P3:L1:LINE|174|-","NA","NA"]
["chrY:21296220|21302561:-","chrY:21232071|21243249:-_chrY:21248977|21249150:-_chrY:21296155|21296220:-_chrY:21302561|21302996:-","UN_NEFLP1_UP_LS0006","NEFLP1","pseudogene","no",4.18,0.16,0,0.002,22,0.001,1,"0(0)","LAML","no","TE_intersect_:21302309|chrY|21302309|21302592|MSTA:ERVL-MaLR:LTR|216|-","TE_intersect_:21296073|chrY|21296073|21296452|THE1C:ERVL-MaLR:LTR|222|-","NA","NA"]
["chrY:21517234|21519150:+","chrY:21511425|21511485:+_chrY:21513347|21513459:+_chrY:21513934|21514037:+_chrY:21517057|21517234:+_chrY:21519150|21519302:+_chrY:21521313|21521427:+_chrY:21522383|21522493:+_chrY:21522935|21523045:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549094:+","RBMY1B_LS004","RBMY1B","protein coding gene","no",1.82,0,0,0.013,129,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21517234|21519150","exon_intersect_chrY:21519150|21519302"]
["chrY:21521427|21522383:+","chrY:21511425|21511485:+_chrY:21513347|21513459:+_chrY:21513934|21514037:+_chrY:21517057|21517234:+_chrY:21519150|21519302:+_chrY:21521313|21521427:+_chrY:21522383|21522493:+_chrY:21522935|21523045:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549094:+","RBMY1B_LS006","RBMY1B","protein coding gene","no",2.71,0,0,0.014,135,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21521427|21522383","exon_intersect_chrY:21522383|21522493"]
["chrY:21522493|21522935:+","chrY:21511425|21511485:+_chrY:21513347|21513459:+_chrY:21513934|21514037:+_chrY:21517057|21517234:+_chrY:21519150|21519302:+_chrY:21521313|21521427:+_chrY:21522383|21522493:+_chrY:21522935|21523045:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549094:+","RBMY1B_LS007","RBMY1B","protein coding gene","no",2.84,0,0,0.014,136,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21522493|21522935","exon_intersect_chrY:21522935|21523045"]
["chrY:21523045|21523480:+","chrY:21495614|21495762:+_chrY:21497773|21497887:+_chrY:21498843|21498953:+_chrY:21499395|21499505:+_chrY:21522935|21523045:+_chrY:21523480|21523590:+_chrY:21524512|21524622:+_chrY:21524710|21524798:+_chrY:21525210|21525786:+","RBMY1B_LS008","RBMY1B","protein coding gene","no",3.21,0,0,0.013,129,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21523045|21523480","exon_intersect_chrY:21523480|21523590"]
["chrY:21524622|21524710:+","chrY:21495614|21495762:+_chrY:21497773|21497887:+_chrY:21498843|21498953:+_chrY:21499395|21499505:+_chrY:21522935|21523045:+_chrY:21523480|21523590:+_chrY:21524512|21524622:+_chrY:21524710|21524798:+_chrY:21525210|21525786:+","RBMY1B_LS011","RBMY1B","protein coding gene","no",1.2,0,0,0.013,124,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21524622|21524710","exon_intersect_chrY:21524710|21524798"]
["chrY:21524798|21525210:+","chrY:21495614|21495762:+_chrY:21497773|21497887:+_chrY:21498843|21498953:+_chrY:21499395|21499505:+_chrY:21522935|21523045:+_chrY:21523480|21523590:+_chrY:21524512|21524622:+_chrY:21524710|21524798:+_chrY:21525210|21525786:+","RBMY1B_LS012","RBMY1B","protein coding gene","no",1.22,0,0,0.013,128,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21524798|21525210","exon_intersect_chrY:21525210|21525786"]
["chrY:21535026|21536888:+","chrY:21534879|21535026:+_chrY:21536888|21537000:+_chrY:21537475|21537578:+_chrY:21540598|21540775:+_chrY:21542691|21542843:+_chrY:21544854|21544968:+_chrY:21545924|21546034:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549326:+","RBMY1A1_LS004","RBMY1A1","protein coding gene","yes",0.69,0,0,0.014,134,0,0,"0(0)","LIHC;TGCT","yes","NA","NA","intron_intersect_chrY:21535026|21536888","exon_intersect_chrY:21536888|21537000"]
["chrY:21537000|21537475:+","chrY:21534879|21535026:+_chrY:21536888|21537000:+_chrY:21537475|21537578:+_chrY:21540598|21540775:+_chrY:21542691|21542843:+_chrY:21544854|21544968:+_chrY:21545924|21546034:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549326:+","RBMY1A1_LS005","RBMY1A1","protein coding gene","yes",1.71,0,0,0.014,131,0,0,"0(0)","LIHC;TGCT","yes","NA","NA","intron_intersect_chrY:21537000|21537475","exon_intersect_chrY:21537475|21537578"]
["chrY:21537578|21540598:+","chrY:21534879|21535026:+_chrY:21536888|21537000:+_chrY:21537475|21537578:+_chrY:21540598|21540775:+_chrY:21542691|21542843:+_chrY:21544854|21544968:+_chrY:21545924|21546034:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549326:+","RBMY1A1_LS006","RBMY1A1","protein coding gene","yes",2.02,0,0,0.013,126,0,0,"0(0)","LIHC;TGCT","yes","NA","NA","intron_intersect_chrY:21537578|21540598","exon_intersect_chrY:21540598|21540775"]
["chrY:21546034|21546476:+","chrY:21511425|21511485:+_chrY:21513347|21513459:+_chrY:21513934|21514037:+_chrY:21540598|21540775:+_chrY:21542691|21542843:+_chrY:21544854|21544968:+_chrY:21545924|21546034:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548250|21548338:+_chrY:21548750|21549094:+","RBMY1A1_LS010","RBMY1A1","protein coding gene","yes",3.58,0,0,0.014,137,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21546034|21546476","exon_intersect_chrY:21546476|21546586"]
["chrY:21546586|21547021:+","chrY:21511425|21511485:+_chrY:21513347|21513459:+_chrY:21513934|21514037:+_chrY:21517057|21517234:+_chrY:21519150|21519302:+_chrY:21521313|21521427:+_chrY:21522383|21522493:+_chrY:21522935|21523045:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549094:+","RBMY1A1_LS011","RBMY1A1","protein coding gene","yes",3.63,0,0,0.014,132,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21546586|21547021","exon_intersect_chrY:21547021|21547131"]
["chrY:21547131|21548053:+","chrY:21511425|21511485:+_chrY:21513347|21513459:+_chrY:21513934|21514037:+_chrY:21517057|21517234:+_chrY:21519150|21519302:+_chrY:21521313|21521427:+_chrY:21522383|21522493:+_chrY:21522935|21523045:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549094:+","RBMY1A1_LS012","RBMY1A1","protein coding gene","yes",1.76,0,0,0.014,133,0,0,"0(0)","LIHC","yes","TE_intersect_:21547122|chrY|21547122|21547318|L1ME3Cz:L1:LINE|217|-","NA","intron_intersect_chrY:21547131|21548053","exon_intersect_chrY:21548053|21548163"]
["chrY:21548163|21548250:+","chrY:21511425|21511485:+_chrY:21513347|21513459:+_chrY:21513934|21514037:+_chrY:21517057|21517234:+_chrY:21519150|21519302:+_chrY:21521313|21521427:+_chrY:21522383|21522493:+_chrY:21522935|21523045:+_chrY:21546476|21546586:+_chrY:21547021|21547131:+_chrY:21548053|21548163:+_chrY:21548250|21548338:+_chrY:21548750|21549094:+","RBMY1A1_LS014","RBMY1A1","protein coding gene","yes",1.98,0,0,0.014,138,0,0,"0(0)","LIHC","yes","NA","NA","intron_intersect_chrY:21548163|21548250","exon_intersect_chrY:21548250|21548338"]
["chrY:21881152|21881240:-","chrY:21880308|21880652:-_chrY:21881064|21881152:-_chrY:21881240|21881350:-_chrY:21882272|21882382:-_chrY:21882817|21882927:-_chrY:21883369|21883479:-_chrY:21884435|21884549:-_chrY:21886560|21886712:-_chrY:21888628|21888805:-_chrY:21891825|21891928:-_chrY:21892405|21892517:-_chrY:21917182|21917246:-_chrY:21917920|21918027:-","RBMY1D_LS002","RBMY1D","protein coding gene","no",0.77,0,0,0.013,125,0,0,"0(0)","LIHC","yes","NA","NA","exon_intersect_chrY:21881240|21881350","intron_intersect_chrY:21881152|21881240"]
["chrY:21881350|21882272:-","chrY:21880308|21880652:-_chrY:21881064|21881152:-_chrY:21881240|21881350:-_chrY:21882272|21882382:-_chrY:21882817|21882927:-_chrY:21883369|21883479:-_chrY:21884435|21884549:-_chrY:21886560|21886712:-_chrY:21888628|21888805:-_chrY:21891825|21891928:-_chrY:21892405|21892517:-_chrY:21917182|21917246:-_chrY:21917920|21918027:-","RBMY1D_LS004","RBMY1D","protein coding gene","no",0.81,0,0,0.013,126,0,0,"0(0)","LIHC","yes","TE_intersect_:21882084|chrY|21882084|21882280|L1ME3Cz:L1:LINE|217|+","NA","exon_intersect_chrY:21882272|21882382","intron_intersect_chrY:21881350|21882272"]
["chrY:21916058|21917920:-","chrY:21903618|21904194:-_chrY:21904606|21904694:-_chrY:21904781|21904891:-_chrY:21905813|21905923:-_chrY:21906358|21906468:-_chrY:21906910|21907020:-_chrY:21907976|21908090:-_chrY:21910101|21910253:-_chrY:21912169|21912346:-_chrY:21915366|21915469:-_chrY:21915946|21916058:-_chrY:21917920|21918067:-","RBMY1E_LS012","RBMY1E","protein coding gene","no",1.6,0,0,0.012,113,0,0,"0(0)","LIHC","yes","NA","NA","exon_intersect_chrY:21917920|21918067","intron_intersect_chrY:21916058|21917920"]
["chrY:22072581|22073644:-","chrY:22069218|22072581:-_chrY:22073644|22073758:-_chrY:22082080|22082195:-_chrY:22084771|22084891:-_chrY:22102105|22102369:-_chrY:22102885|22103006:-_chrY:22103864|22103949:-_chrY:22105750|22106168:-","PRY2_LS001","PRY2","protein coding gene","no",0.68,0,0,0.003,30,0,0,"0(0)","SKCM","yes","NA","NA","exon_intersect_chrY:22073644|22073758","intron_intersect_chrY:22072581|22073644"]
["chrY:22072581|22082080:-","chrY:22069544|22072581:-_chrY:22082080|22082195:-_chrY:22084771|22085398:-","PRY2_LS002","PRY2","protein coding gene","no",1.28,0,0,0.006,56,0,0,"0(0)","SKCM","yes","NA","NA","exon_intersect_chrY:22082080|22082195","intron_intersect_chrY:22072581|22073644"]
["chrY:22073758|22082080:-","chrY:22069218|22072581:-_chrY:22073644|22073758:-_chrY:22082080|22082195:-_chrY:22084771|22084891:-_chrY:22102105|22102369:-_chrY:22102885|22103006:-_chrY:22103864|22103949:-_chrY:22105750|22106168:-","PRY2_LS003","PRY2","protein coding gene","no",0.67,0,0,0.003,30,0,0,"0(0)","SKCM","yes","NA","TE_intersect_:22073647|chrY|22073647|22073930|AluSx:Alu:SINE|216|+","exon_intersect_chrY:22082080|22082195","intron_intersect_chrY:22073758|22082080"]
["chrY:22082195|22084771:-","chrY:22069544|22072581:-_chrY:22082080|22082195:-_chrY:22084771|22085398:-","PRY2_LS004","PRY2","protein coding gene","no",0.89,0,0,0.006,59,0,0,"0(0)","SKCM","yes","NA","NA","exon_intersect_chrY:22084771|22084891","intron_intersect_chrY:22082195|22084771"]
["chrY:22095818|22095920:-","chrY:22071756|22072581:-_chrY:22073644|22073758:-_chrY:22082080|22082195:-_chrY:22084771|22084891:-_chrY:22095732|22095818:-_chrY:22095920|22096007:-","PRY2_LS006","PRY2","protein coding gene","no",0.23,0,0,0.006,56,0,0,"0(0)","SKCM","yes","NA","NA","exon_intersect_chrY:22095920|22096007","intron_intersect_chrY:22095818|22095920"]
["chrY:22308970|22405444:+","chrY:22308823|22308970:+_chrY:22405444|22405556:+_chrY:22406025|22406128:+_chrY:22409152|22409329:+_chrY:22411245|22411397:+_chrY:22413408|22413522:+_chrY:22414478|22414588:+_chrY:22415029|22415139:+_chrY:22415574|22415684:+_chrY:22416805|22416893:+_chrY:22417305|22417881:+","UN_AC008175.1_UP_LS0001","AC008175.1","lncRNA gene","no",1.79,0,0,0.008,79,0.001,1,"0(0)","TGCT","no","NA","NA","intron_intersect_chrY:22308970|22310860","exon_intersect_chrY:22405444|22405556"]
["chrY:22415684|22416805:+","chrY:22308823|22308970:+_chrY:22405444|22405556:+_chrY:22406025|22406128:+_chrY:22409152|22409329:+_chrY:22411245|22411397:+_chrY:22413408|22413522:+_chrY:22414478|22414588:+_chrY:22415029|22415139:+_chrY:22415574|22415684:+_chrY:22416805|22416893:+_chrY:22417305|22417881:+","UN_RBMY1J_LS0001","RBMY1J","protein coding gene","no",0.98,0,0,0.007,69,0,0,"0(0)","TGCT","no","TE_intersect_:22415675|chrY|22415675|22415871|L1ME3Cz:L1:LINE|217|-","NA","intron_intersect_chrY:22415684|22416608","exon_intersect_chrY:22416805|22416893"]
["chrY:22490484|22490586:+","chrY:22490397|22490484:+_chrY:22490586|22490672:+_chrY:22501513|22501633:+_chrY:22504209|22504324:+_chrY:22512638|22512752:+_chrY:22513812|22514637:+","PRY_LS001","PRY","protein coding gene","no",0.2,0,0,0.006,57,0,0,"0(0)","SKCM","yes","NA","NA","intron_intersect_chrY:22490484|22490586","exon_intersect_chrY:22490586|22490672"]
["chrY:22490672|22501513:+","chrY:22490397|22490484:+_chrY:22490586|22490672:+_chrY:22501513|22501633:+_chrY:22504209|22504324:+_chrY:22512638|22512752:+_chrY:22513812|22514637:+","PRY_LS002","PRY","protein coding gene","no",0.35,0,0,0.006,57,0,0,"0(0)","SKCM","yes","NA","NA","intron_intersect_chrY:22490672|22501513","exon_intersect_chrY:22501513|22501633"]
["chrY:22501633|22504209:+","chrY:22438903|22439140:+_chrY:22446332|22446472:+_chrY:22464230|22464348:+_chrY:22483400|22483521:+_chrY:22484037|22484301:+_chrY:22501513|22501633:+_chrY:22504209|22504324:+_chrY:22513812|22516858:+","PRY_LS003","PRY","protein coding gene","no",1.07,0,0,0.006,57,0,0,"0(0)","SKCM","yes","NA","NA","intron_intersect_chrY:22501633|22504209","exon_intersect_chrY:22504209|22504324"]
["chrY:22504324|22512638:+","chrY:22480238|22480656:+_chrY:22482457|22482542:+_chrY:22483400|22483521:+_chrY:22484037|22484301:+_chrY:22501513|22501633:+_chrY:22504209|22504324:+_chrY:22512638|22512752:+_chrY:22513812|22517175:+","PRY_LS004","PRY","protein coding gene","no",0.95,0,0,0.003,30,0,0,"0(0)","SKCM","yes","NA","TE_intersect_:22512465|chrY|22512465|22512748|AluSx:Alu:SINE|216|-","intron_intersect_chrY:22504324|22512638","exon_intersect_chrY:22512638|22512752"]
["chrY:22504324|22513812:+","chrY:22438903|22439140:+_chrY:22446332|22446472:+_chrY:22464230|22464348:+_chrY:22483400|22483521:+_chrY:22484037|22484301:+_chrY:22501513|22501633:+_chrY:22504209|22504324:+_chrY:22513812|22516858:+","PRY_LS005","PRY","protein coding gene","no",0.73,0,0,0.006,55,0,0,"0(0)","SKCM","yes","NA","NA","intron_intersect_chrY:22504324|22512638","exon_intersect_chrY:22513812|22514637"]
["chrY:22512752|22513812:+","chrY:22480238|22480656:+_chrY:22482457|22482542:+_chrY:22483400|22483521:+_chrY:22484037|22484301:+_chrY:22501513|22501633:+_chrY:22504209|22504324:+_chrY:22512638|22512752:+_chrY:22513812|22517175:+","PRY_LS006","PRY","protein coding gene","no",0.95,0,0,0.003,30,0,0,"0(0)","SKCM","yes","NA","NA","intron_intersect_chrY:22512752|22513812","exon_intersect_chrY:22513812|22514637"]
["chrY:23162420|23164740:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23162349|23162420:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS016","DAZ1","protein coding gene","no",2.91,0,0.7,0.008,72,0,0,"0(6)","ESCA","yes","NA","NA","exon_intersect_chrY:23164740|23164811","intron_intersect_chrY:23162420|23164740"]
["chrY:23167256|23168657:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS018","DAZ1","protein coding gene","no",2.86,0,0,0.006,62,0,0,"0(0)","ESCA;STAD","yes","NA","NA","exon_intersect_chrY:23168657|23168796","intron_intersect_chrY:23167256|23168657"]
["chrY:23168796|23168886:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS020","DAZ1","protein coding gene","no",2.88,0,0,0.006,59,0,0,"0(0)","ESCA;STAD","yes","NA","NA","exon_intersect_chrY:23168886|23168949","intron_intersect_chrY:23168796|23168886"]
["chrY:23168949|23169386:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS021","DAZ1","protein coding gene","no",1.52,0,0,0.006,57,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23169386|23169437","intron_intersect_chrY:23168949|23169386"]
["chrY:23169437|23169998:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS022","DAZ1","protein coding gene","no",1.44,0,0,0.006,53,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23169998|23170089","intron_intersect_chrY:23169437|23169998"]
["chrY:23170089|23170364:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS023","DAZ1","protein coding gene","no",1.08,0,0,0.005,51,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23170364|23170510","intron_intersect_chrY:23170089|23170364"]
["chrY:23170510|23179497:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS024","DAZ1","protein coding gene","no",1.51,0,0,0.006,54,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23179497|23179636","intron_intersect_chrY:23170510|23178021"]
["chrY:23179636|23179726:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS025","DAZ1","protein coding gene","no",2.97,0,0,0.006,59,0,0,"0(0)","ESCA;STAD","yes","NA","NA","exon_intersect_chrY:23179726|23179789","intron_intersect_chrY:23179636|23179726"]
["chrY:23179789|23180226:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS026","DAZ1","protein coding gene","no",2.07,0,0,0.006,57,0,0,"0(0)","ESCA;STAD","yes","NA","NA","exon_intersect_chrY:23180226|23180277","intron_intersect_chrY:23179789|23180226"]
["chrY:23180277|23180838:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS027","DAZ1","protein coding gene","no",1.92,0,0,0.006,56,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23180838|23180929","intron_intersect_chrY:23180277|23180838"]
["chrY:23180929|23181204:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS028","DAZ1","protein coding gene","no",1.48,0,0,0.006,56,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23181204|23181350","intron_intersect_chrY:23180929|23181204"]
["chrY:23181350|23190345:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS029","DAZ1","protein coding gene","no",1.77,0,0,0.006,59,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23190345|23190484","intron_intersect_chrY:23181350|23188869"]
["chrY:23190484|23190574:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS030","DAZ1","protein coding gene","no",2.8,0,0,0.007,64,0,0,"0(0)","ESCA;STAD","yes","NA","NA","exon_intersect_chrY:23190574|23190637","intron_intersect_chrY:23190484|23190574"]
["chrY:23190637|23191074:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS031","DAZ1","protein coding gene","no",2.3,0,0,0.006,61,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23191074|23191125","intron_intersect_chrY:23190637|23191074"]
["chrY:23191125|23191686:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS032","DAZ1","protein coding gene","no",2.21,0,0,0.006,61,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23191686|23191777","intron_intersect_chrY:23191125|23191686"]
["chrY:23191777|23192052:-","chrY:23129363|23131211:-_chrY:23135175|23135273:-_chrY:23139847|23139881:-_chrY:23140626|23140697:-_chrY:23143011|23143082:-_chrY:23152797|23152835:-_chrY:23157609|23157641:-_chrY:23159953|23160024:-_chrY:23164740|23164811:-_chrY:23167185|23167256:-_chrY:23168657|23168796:-_chrY:23168886|23168949:-_chrY:23169386|23169437:-_chrY:23169998|23170089:-_chrY:23170364|23170510:-_chrY:23179497|23179636:-_chrY:23179726|23179789:-_chrY:23180226|23180277:-_chrY:23180838|23180929:-_chrY:23181204|23181350:-_chrY:23190345|23190484:-_chrY:23190574|23190637:-_chrY:23191074|23191125:-_chrY:23191686|23191777:-_chrY:23192052|23192198:-_chrY:23198798|23199008:-","DAZ1_LS033","DAZ1","protein coding gene","no",0.85,0,0,0.006,57,0,0,"0(0)","ESCA","yes","NA","NA","exon_intersect_chrY:23192052|23192198","intron_intersect_chrY:23191777|23192052"]
["chrY:23234503|23236828:+","chrY:23219548|23219743:+_chrY:23226344|23226490:+_chrY:23226765|23226856:+_chrY:23227417|23227468:+_chrY:23227905|23227968:+_chrY:23228058|23228197:+_chrY:23229598|23229669:+_chrY:23232041|23232112:+_chrY:23234432|23234503:+_chrY:23236828|23236899:+_chrY:23239210|23239281:+_chrY:23241606|23241677:+_chrY:23243990|23244061:+_chrY:23246386|23246457:+_chrY:23248763|23248834:+_chrY:23265707|23265778:+_chrY:23268091|23268162:+_chrY:23270476|23270547:+_chrY:23272860|23272931:+_chrY:23275244|23275315:+_chrY:23277628|23277699:+_chrY:23280013|23280084:+_chrY:23280829|23280863:+_chrY:23285438|23285536:+_chrY:23289500|23291352:+","DAZ2_LS010","DAZ2","protein coding gene","no",4.32,0,0,0.006,55,0,0,"0(0)","STAD","yes","NA","NA","intron_intersect_chrY:23234503|23236828","exon_intersect_chrY:23236828|23236899"]
["chrY:24798494|24800813:-","chrY:24763069|24764925:-_chrY:24768899|24768997:-_chrY:24773570|24773604:-_chrY:24774350|24774421:-_chrY:24784137|24784208:-_chrY:24786514|24786585:-_chrY:24788894|24788965:-_chrY:24791271|24791342:-_chrY:24793650|24793721:-_chrY:24796027|24796098:-_chrY:24798423|24798494:-_chrY:24800813|24800884:-_chrY:24803256|24803327:-_chrY:24804728|24804867:-_chrY:24804957|24805020:-_chrY:24805457|24805508:-_chrY:24806069|24806160:-_chrY:24806435|24806557:-","DAZ3_LS015","DAZ3","protein coding gene","no",3.44,0,0,0.005,49,0,0,"0(0)","STAD","yes","NA","NA","exon_intersect_chrY:24800813|24800884","intron_intersect_chrY:24798494|24800813"]
["chrY:24800884|24803256:-","chrY:24763069|24764925:-_chrY:24768899|24768997:-_chrY:24773570|24773604:-_chrY:24774350|24774421:-_chrY:24784137|24784208:-_chrY:24786514|24786585:-_chrY:24788894|24788965:-_chrY:24791271|24791342:-_chrY:24793650|24793721:-_chrY:24796027|24796098:-_chrY:24798423|24798494:-_chrY:24800813|24800884:-_chrY:24803256|24803327:-_chrY:24804728|24804867:-_chrY:24804957|24805020:-_chrY:24805457|24805508:-_chrY:24806069|24806160:-_chrY:24806435|24806557:-","DAZ3_LS016","DAZ3","protein coding gene","no",3.29,0,0,0.005,51,0,0,"0(0)","STAD","yes","NA","NA","exon_intersect_chrY:24803256|24803327","intron_intersect_chrY:24800884|24803256"]
["chrY:24803327|24804728:-","chrY:24763069|24764925:-_chrY:24768899|24768997:-_chrY:24773570|24773604:-_chrY:24774350|24774421:-_chrY:24784137|24784208:-_chrY:24786514|24786585:-_chrY:24788894|24788965:-_chrY:24791271|24791342:-_chrY:24793650|24793721:-_chrY:24796027|24796098:-_chrY:24798423|24798494:-_chrY:24800813|24800884:-_chrY:24803256|24803327:-_chrY:24804728|24804867:-_chrY:24804957|24805020:-_chrY:24805457|24805508:-_chrY:24806069|24806160:-_chrY:24806435|24806557:-","DAZ3_LS017","DAZ3","protein coding gene","no",3.01,0,0,0.005,52,0,0,"0(0)","STAD","yes","NA","NA","exon_intersect_chrY:24804728|24804867","intron_intersect_chrY:24803327|24804728"]
["chrY:24804867|24804957:-","chrY:24763069|24764925:-_chrY:24768899|24768997:-_chrY:24773570|24773604:-_chrY:24774350|24774421:-_chrY:24784137|24784208:-_chrY:24786514|24786585:-_chrY:24788894|24788965:-_chrY:24791271|24791342:-_chrY:24793650|24793721:-_chrY:24796027|24796098:-_chrY:24798423|24798494:-_chrY:24800813|24800884:-_chrY:24803256|24803327:-_chrY:24804728|24804867:-_chrY:24804957|24805020:-_chrY:24805457|24805508:-_chrY:24806069|24806160:-_chrY:24806435|24806557:-","DAZ3_LS018","DAZ3","protein coding gene","no",2.93,0,0,0.005,48,0,0,"0(0)","STAD","yes","NA","NA","exon_intersect_chrY:24804957|24805020","intron_intersect_chrY:24804867|24804957"]
["chrY:26406783|26408912:-","chrY:26406627|26406783:-_chrY:26408912|26409095:-","UN_PPP1R12BP1_UP_LS0002","PPP1R12BP1","pseudogene","no",1.78,0,0,0.005,50,0,0,"0(0)","TGCT","no","NA","TE_intersect_:26406775|chrY|26406775|26407565|L1M1:L1:LINE|152|+","NA","NA"]
["chrY:3171578|3199500:+","chrY:3171451|3171578:+_chrY:3199500|3200474:+","UN_AGPAT5P1_UP_LS0020","AGPAT5P1","pseudogene","no",2.21,0,0,0.004,42,0,0,"0(0)","PRAD","no","TE_intersect_:3171199|chrY|3171199|3171778|LTR66:ERVL:LTR|153|+","TE_intersect_:3199466|chrY|3199466|3199772|AluSx3:Alu:SINE|105|-","NA","NA"]
["chrY:3804496|3809569:+","chrY:3776165|3776345:+_chrY:3803829|3803952:+_chrY:3804385|3804496:+_chrY:3809569|3809743:+_chrY:3831341|3831407:+_chrY:3832407|3832461:+_chrY:3835464|3835533:+_chrY:3835994|3836967:+","UN_AC010737.1_UP_LS0004","AC010737.1","lncRNA gene","no",2.32,0,0,0.004,42,0,0,"0(0)","KIRC","no","TE_intersect_:3804331|chrY|3804331|3804876|HERVFH19-int:ERV1:LTR|64|+","TE_intersect_:3809554|chrY|3809554|3811618|L1PBa:L1:LINE|260|+","NA","NA"]
["chrY:3804496|3835464:+","chrY:3776227|3776345:+_chrY:3803829|3803952:+_chrY:3804385|3804496:+_chrY:3835464|3835533:+_chrY:3835994|3837017:+","UN_AC010737.1_UP_LS0006","AC010737.1","lncRNA gene","no",4.79,0,0,0.009,84,0,0,"0(0)","KIRC","no","TE_intersect_:3804331|chrY|3804331|3804876|HERVFH19-int:ERV1:LTR|64|+","NA","NA","NA"]
["chrY:3804496|3863637:+","chrY:3776209|3776345:+_chrY:3803829|3803952:+_chrY:3804385|3804496:+_chrY:3863637|3863698:+_chrY:3863837|3863930:+_chrY:3864397|3865323:+","UN_AC010737.1_UP_LS0008","AC010737.1","lncRNA gene","no",3.04,0,0,0.005,51,0,0,"0(0)","KIRC","no","TE_intersect_:3804331|chrY|3804331|3804876|HERVFH19-int:ERV1:LTR|64|+","TE_intersect_:3862125|chrY|3862125|3864614|MER4-int:ERV1:LTR|118|+","NA","NA"]
["chrY:3835533|3835994:+","chrY:3809568|3809743:+_chrY:3835464|3835533:+_chrY:3835994|3836712:+","UN_AC010737.1_UP_LS0015","AC010737.1","lncRNA gene","no",3.57,0,0,0.01,96,0,0,"0(0)","KIRC","no","NA","TE_intersect_:3835975|chrY|3835975|3836109|AluJr:Alu:SINE|172|-","NA","NA"]
["chrY:3863698|3863837:+","chrY:3776209|3776345:+_chrY:3803829|3803952:+_chrY:3804385|3804496:+_chrY:3863637|3863698:+_chrY:3863837|3863930:+_chrY:3864397|3865323:+","UN_AC010737.1_UP_LS0016","AC010737.1","lncRNA gene","no",2.17,0,0,0.007,63,0,0,"0(0)","KIRC","no","TE_intersect_:3862125|chrY|3862125|3864614|MER4-int:ERV1:LTR|118|+","TE_intersect_:3862125|chrY|3862125|3864614|MER4-int:ERV1:LTR|118|+","NA","NA"]
["chrY:3863930|3864397:+","chrY:3776209|3776345:+_chrY:3803829|3803952:+_chrY:3804385|3804496:+_chrY:3863637|3863698:+_chrY:3863837|3863930:+_chrY:3864397|3865323:+","UN_AC010737.1_UP_LS0017","AC010737.1","lncRNA gene","no",2.22,0,0,0.008,75,0,0,"0(0)","KIRC","no","TE_intersect_:3862125|chrY|3862125|3864614|MER4-int:ERV1:LTR|118|+","TE_intersect_:3862125|chrY|3862125|3864614|MER4-int:ERV1:LTR|118|+","NA","NA"]
["chrY:5325184|5327993:-","chrY:5323651|5325184:-_chrY:5327993|5330474:-","UN_PCDH11Y_LS0005","PCDH11Y","protein coding gene","no",2.85,0,0,0.003,32,0,0,"0(0)","TGCT","no","TE_intersect_:5327119|chrY|5327119|5329975|HERVH-int:ERV1:LTR|112|-","TE_intersect_:5324786|chrY|5324786|5325235|LTR7:ERV1:LTR|70|-","intron_intersect_chrY:5208069|5337745","intron_intersect_chrY:5208069|5337745"]
["chrY:5325245|5327993:-","chrY:5323767|5325245:-_chrY:5327993|5330961:-","UN_PCDH11Y_LS0006","PCDH11Y","protein coding gene","no",3.39,0,0,0.001,13,0,0,"0(0)","TGCT","no","TE_intersect_:5327119|chrY|5327119|5329975|HERVH-int:ERV1:LTR|112|-","TE_intersect_:5325235|chrY|5325235|5325608|HERVH-int:ERV1:LTR|87|-","intron_intersect_chrY:5208069|5337745","intron_intersect_chrY:5208069|5337745"]
["chrY:5944131|5945405:-","chrY:5943997|5944131:-_chrY:5945405|5945543:-","UN_RPL26P37_UP_LS0002","RPL26P37","pseudogene","no",2.19,0,0,0.001,12,0,0,"0(0)","TGCT","no","TE_intersect_:5945274|chrY|5945274|5945586|HERVH-int:ERV1:LTR|72|+","TE_intersect_:5941562|chrY|5941562|5944586|HERVH-int:ERV1:LTR|97|+","NA","NA"]
["chrY:6141735|6153591:+","chrY:6141277|6141735:+_chrY:6153591|6153706:+_chrY:6156298|6156368:+_chrY:6165678|6165726:+_chrY:6235386|6235456:+_chrY:6236072|6236411:+_chrY:6238098|6238233:+_chrY:6238599|6238844:+_chrY:6243876|6244048:+_chrY:6247356|6247433:+_chrY:6247562|6247673:+_chrY:6247775|6247920:+_chrY:6248027|6248108:+_chrY:6248803|6249004:+","UN_DLGAP5P1_UP_LS0003","DLGAP5P1","pseudogene","no",3.77,0,0,0.001,11,0,0,"0(0)","MESO","no","TE_intersect_:6139626|chrY|6139626|6142590|HERVH-int:ERV1:LTR|105|+","TE_intersect_:6153439|chrY|6153439|6153865|MER4A1:ERV1:LTR|127|-","NA","NA"]
["chrY:6153706|6156298:+","chrY:6141277|6141735:+_chrY:6153591|6153706:+_chrY:6156298|6156368:+_chrY:6165678|6165726:+_chrY:6235386|6235456:+_chrY:6236072|6236411:+_chrY:6238098|6238233:+_chrY:6238599|6238844:+_chrY:6243876|6244048:+_chrY:6247356|6247433:+_chrY:6247562|6247673:+_chrY:6247775|6247920:+_chrY:6248027|6248108:+_chrY:6248803|6249004:+","UN_DLGAP5P1_UP_LS0005","DLGAP5P1","pseudogene","no",3.05,0,0,0.001,12,0,0,"0(0)","MESO","no","TE_intersect_:6153439|chrY|6153439|6153865|MER4A1:ERV1:LTR|127|-","TE_intersect_:6156298|chrY|6156298|6156495|MER41C:ERV1:LTR|121|-","NA","NA"]
["chrY:6238844|6240089:+","chrY:6238109|6238233:+_chrY:6238599|6238844:+_chrY:6240089|6241361:+","UN_TSPY2_UP_LS0009","TSPY2","protein coding gene","no",2.77,0,0,0.002,17,0,0,"0(0)","MESO","no","NA","NA","NA","NA"]
["chrY:6247673|6247782:+","chrY:6247623|6247673:+_chrY:6247782|6247920:+_chrY:6248027|6248108:+_chrY:6248803|6248892:+","UN_TSPY2_LS0003","TSPY2","protein coding gene","no",17.94,0,0,0.004,37,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrY:6247562|6248108","exon_intersect_chrY:6247562|6248108"]
["chrY:6542903|6605232:-","chrY:6542585|6542903:-_chrY:6605232|6605286:-_chrY:6605655|6605862:-","UN_AC010154.1_UP_LS0001","AC010154.1","pseudogene","no",4.24,0,0,0.003,30,0,0,"0(0)","TGCT","no","TE_intersect_:6605082|chrY|6605082|6605687|MER61-int:ERV1:LTR|199|-","TE_intersect_:6542625|chrY|6542625|6542904|AluSx:Alu:SINE|115|+","NA","NA"]
["chrY:6605286|6605655:-","chrY:6542585|6542903:-_chrY:6605232|6605286:-_chrY:6605655|6605862:-","UN_AC010154.1_UP_LS0005","AC010154.1","pseudogene","no",5.71,0,0,0.004,42,0,0,"0(0)","TGCT","no","TE_intersect_:6605082|chrY|6605082|6605687|MER61-int:ERV1:LTR|199|-","TE_intersect_:6605082|chrY|6605082|6605687|MER61-int:ERV1:LTR|199|-","NA","NA"]
["chrY:7274478|7299515:+","chrY:7273972|7274478:+_chrY:7299515|7299610:+_chrY:7303937|7304105:+_chrY:7325906|7326169:+_chrY:7341115|7341234:+_chrY:7356135|7356230:+_chrY:7367356|7367433:+_chrY:7371743|7381548:+","UN_PRKY_LS0007","PRKY","pseudogene","no",0.86,0,0,0.003,26,0,0,"0(0)","LAML","no","NA","TE_intersect_:7299454|chrY|7299454|7299671|AluSx1:Alu:SINE|158|-","intron_intersect_chrY:7274478|7303937","intron_intersect_chrY:7274478|7303937"]
["chrY:7275065|7303937:+","chrY:7274313|7275065:+_chrY:7303937|7304105:+_chrY:7325906|7331995:+_chrY:7332959|7341234:+_chrY:7356135|7356230:+_chrY:7367356|7367433:+_chrY:7371743|7381548:+","UN_PRKY_LS0012","PRKY","pseudogene","no",0.86,0,0,0.005,52,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrY:7274478|7303937","exon_intersect_chrY:7303937|7304105"]
["chrY:7285119|7299515:+","chrY:7273972|7274478:+_chrY:7285028|7285119:+_chrY:7299515|7299610:+_chrY:7303937|7304105:+_chrY:7325906|7326169:+_chrY:7328027|7335506:+","UN_PRKY_LS0017","PRKY","pseudogene","no",1.23,0,0,0.003,30,0,0,"0(0)","LAML","no","TE_intersect_:7284837|chrY|7284837|7285140|AluJr:Alu:SINE|162|-","TE_intersect_:7299454|chrY|7299454|7299671|AluSx1:Alu:SINE|158|-","intron_intersect_chrY:7274478|7303937","intron_intersect_chrY:7274478|7303937"]
["chrY:7328148|7331878:+","chrY:7273972|7274478:+_chrY:7303937|7304105:+_chrY:7325906|7326169:+_chrY:7328027|7328148:+_chrY:7331878|7333108:+_chrY:7341115|7341234:+_chrY:7356135|7356223:+","UN_PRKY_LS0036","PRKY","pseudogene","no",4.33,0,0,0.003,29,0,0,"0(0)","LAML","no","TE_intersect_:7328001|chrY|7328001|7328308|AluJr:Alu:SINE|192|-","TE_intersect_:7331845|chrY|7331845|7332143|AluSx1:Alu:SINE|134|-","exon_intersect_chrY:7328027|7328403","intron_intersect_chrY:7328403|7333030"]
["chrY:7331995|7332802:+","chrY:7273972|7274478:+_chrY:7303937|7304105:+_chrY:7325906|7326169:+_chrY:7328027|7331995:+_chrY:7332802|7333108:+_chrY:7337842|7341234:+_chrY:7356135|7356223:+","UN_PRKY_LS0045","PRKY","pseudogene","no",1.9,0,0,0.005,44,0,0,"0(0)","LAML","no","TE_intersect_:7331845|chrY|7331845|7332143|AluSx1:Alu:SINE|134|-","TE_intersect_:7332774|chrY|7332774|7333076|AluSx:Alu:SINE|195|-","intron_intersect_chrY:7328403|7333030","intron_intersect_chrY:7328403|7333030"]
["chrY:7333108|7338176:+","chrY:7273972|7274478:+_chrY:7303937|7304105:+_chrY:7325906|7326169:+_chrY:7328027|7331995:+_chrY:7332959|7333108:+_chrY:7338176|7341234:+_chrY:7356135|7356223:+","UN_PRKY_LS0050","PRKY","pseudogene","no",3.14,0,0,0.002,16,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrY:7333108|7341115","intron_intersect_chrY:7333108|7341115"]
["chrY:7339192|7339963:+","chrY:7335568|7339192:+_chrY:7339963|7340022:+_chrY:7341115|7341234:+_chrY:7356135|7356230:+_chrY:7367356|7367433:+_chrY:7371743|7381548:+","UN_PRKY_LS0054","PRKY","pseudogene","no",1.66,0,0,0.002,20,0,0,"0(0)","LAML","no","NA","NA","intron_intersect_chrY:7333108|7341115","intron_intersect_chrY:7333108|7341115"]
["chrY:7464202|7501009:+","chrY:7463911|7464202:+_chrY:7501009|7501167:+_chrY:7520080|7520591:+","UN_AC007274.3_UP_LS0006","AC007274.3","pseudogene","no",1.51,0,0,0.002,21,0,0,"0(0)","SARC","no","TE_intersect_:7464182|chrY|7464182|7464312|MLT1D:ERVL-MaLR:LTR|308|+","TE_intersect_:7500589|chrY|7500589|7501024|LTR7B:ERV1:LTR|78|+","NA","NA"]
["chrY:7495927|7502826:-","chrY:7495021|7495114:-_chrY:7495764|7495927:-_chrY:7502826|7503019:-","UN_RNU6-521P_UP_LS0002","RNU6-521P","small non-coding RNA gene","no",6.77,0,0,0.003,26,0,0,"0(0)","MESO","no","TE_intersect_:7501024|chrY|7501024|7505195|HERVH-int:ERV1:LTR|201|+","NA","NA","NA"]
["chrY:7695784|7697080:-","chrY:7694519|7695784:-_chrY:7697080|7697274:-_chrY:7699187|7699487:-_chrY:7701187|7701247:-","UN_TSPY12P_UP_LS0003","TSPY12P","pseudogene","no",6.82,0,0,0.003,29,0,0,"0(0)","ACC","no","NA","NA","NA","NA"]
["chrY:7776707|7789987:-","chrY:7742602|7743027:-_chrY:7776521|7776707:-_chrY:7789987|7791044:-","UN_RFTN1P1_LS0012","RFTN1P1","pseudogene","no",1.94,0,0,0.003,30,0,0,"0(0)","PRAD","no","NA","NA","intron_intersect_chrY:7777028|7804924","intron_intersect_chrY:7776707|7776834"]
["chrY:7776707|7803598:-","chrY:7742644|7743027:-_chrY:7776521|7776707:-_chrY:7803598|7803900:-","UN_RFTN1P1_LS0014","RFTN1P1","pseudogene","no",2.7,0,0,0.004,39,0,0,"0(0)","HNSC","no","NA","NA","intron_intersect_chrY:7777028|7804924","intron_intersect_chrY:7776707|7776834"]
["chrY:8087726|8091598:-","chrY:8068401|8070117:-_chrY:8076990|8077174:-_chrY:8087644|8087726:-_chrY:8091598|8093770:-_chrY:8111850|8111964:-_chrY:8126058|8126303:-","UN_ZNF736P9Y_UP_LS0009","ZNF736P9Y","pseudogene","no",2.36,0,0,0.003,25,0,0,"0(0)","ESCA","no","NA","NA","NA","NA"]
["chrY:8087726|8111850:-","chrY:8068400|8070117:-_chrY:8076990|8077174:-_chrY:8087644|8087726:-_chrY:8111850|8111964:-_chrY:8126058|8126321:-","UN_ZNF736P9Y_UP_LS0012","ZNF736P9Y","pseudogene","no",2.01,0,0,0.01,97,0,0,"0(0)","ESCA","no","TE_intersect_:8111682|chrY|8111682|8112574|MER66-int:ERV1:LTR|276|+","NA","NA","NA"]
["chrY:8121390|8126058:-","chrY:8120940|8121390:-_chrY:8126058|8126315:-","UN_ZNF736P9Y_UP_LS0023","ZNF736P9Y","pseudogene","no",2.44,0,0,0.011,103,0,0,"0(0)","ESCA;HNSC;MESO","no","TE_intersect_:8124641|chrY|8124641|8126183|HERVK14C-int:ERVK:LTR|90|-","TE_intersect_:8121183|chrY|8121183|8121442|MER1B:hAT-Charlie:DNA|226|-","NA","NA"]
["chrY:8140086|8140800:+","chrY:8139946|8140086:+_chrY:8140800|8140960:+_chrY:8143399|8143487:+_chrY:8177719|8178778:+","UN_RBMY2JP_LS0001","RBMY2JP","pseudogene","no",1.82,0,0,0.018,175,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC","no","TE_intersect_:8134318|chrY|8134318|8140335|L1PA2:L1:LINE|35|-","TE_intersect_:8140612|chrY|8140612|8140909|AluJo:Alu:SINE|279|-","intron_intersect_chrY:8134162|8142226","intron_intersect_chrY:8134162|8142226"]
["chrY:8140960|8143399:+","chrY:8139946|8140086:+_chrY:8140800|8140960:+_chrY:8143399|8143487:+_chrY:8177719|8178778:+","UN_RBMY2JP_LS0003","RBMY2JP","pseudogene","no",2.57,0,0,0.019,179,0,0,"0(0)","BLCA;ESCA;HNSC;LUSC","no","NA","NA","intron_intersect_chrY:8134162|8142226","exon_intersect_chrY:8143394|8143487"]
["chrY:8143487|8177700:+","chrY:8139919|8140086:+_chrY:8140800|8140960:+_chrY:8143399|8143487:+_chrY:8177700|8178772:+","UN_TSPY24P_UP_LS0006","TSPY24P","pseudogene","no",2.14,0,0,0.005,50,0,0,"0(0)","LUSC","no","NA","TE_intersect_:8177667|chrY|8177667|8177824|AluSx1:Alu:SINE|198|-","intron_intersect_chrY:8143487|8143902","NA"]
["chrY:8143487|8177719:+","chrY:8139946|8140086:+_chrY:8140800|8140960:+_chrY:8143399|8143487:+_chrY:8177719|8178778:+","UN_TSPY24P_UP_LS0007","TSPY24P","pseudogene","no",1.97,0,0,0.008,81,0,0,"0(0)","ESCA;LUSC","no","NA","TE_intersect_:8177667|chrY|8177667|8177824|AluSx1:Alu:SINE|198|-","intron_intersect_chrY:8143487|8143902","NA"]
["chrY:8649584|8650161:+","chrY:8634736|8635041:+_chrY:8649435|8649584:+_chrY:8650161|8650498:+","UN_TTTY19_UP_LS0006","TTTY19","lncRNA gene","no",5.8,0,0,0.009,91,0,0,"0(0)","GBM;SKCM","no","TE_intersect_:8648346|chrY|8648346|8652485|HERVE_a-int:ERV1:LTR|221|+","TE_intersect_:8648346|chrY|8648346|8652485|HERVE_a-int:ERV1:LTR|221|+","intron_intersect_chrY:8644842|8658652","intron_intersect_chrY:8644842|8658652"]
["chrY:8667655|8668811:-","chrY:8667414|8667655:-_chrY:8668811|8668931:-_chrY:8669041|8669289:-_chrY:8672402|8672609:-_chrY:8673764|8673912:-_chrY:8674891|8674965:-_chrY:8677264|8677589:-","UN_AC016991.1_UP_LS0005","AC016991.1","pseudogene","no",3.5,0,0,0.004,34,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8668931|8669041:-","chrY:8667414|8667655:-_chrY:8668811|8668931:-_chrY:8669041|8669289:-_chrY:8672402|8672609:-_chrY:8673764|8673912:-_chrY:8674891|8674965:-_chrY:8677264|8677589:-","UN_AC016991.1_UP_LS0007","AC016991.1","pseudogene","no",4.87,0,0,0.003,26,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8669289|8673764:-","chrY:8667414|8667655:-_chrY:8668811|8668931:-_chrY:8669041|8669289:-_chrY:8673764|8673912:-_chrY:8674891|8674965:-_chrY:8677264|8677616:-","UN_AC016991.1_UP_LS0009","AC016991.1","pseudogene","no",4.94,0,0,0.001,13,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8672609|8673764:-","chrY:8667414|8667655:-_chrY:8668811|8668931:-_chrY:8669041|8669289:-_chrY:8672402|8672609:-_chrY:8673764|8673912:-_chrY:8674891|8674965:-_chrY:8677264|8677589:-","UN_AC016991.1_UP_LS0010","AC016991.1","pseudogene","no",2.59,0,0,0.004,42,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8673912|8677264:-","chrY:8667416|8667655:-_chrY:8668811|8668931:-_chrY:8669041|8669289:-_chrY:8672402|8672609:-_chrY:8673764|8673912:-_chrY:8677264|8677589:-","UN_AC016991.1_UP_LS0012","AC016991.1","pseudogene","no",3.2,0,0,0.003,24,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8674965|8677264:-","chrY:8667416|8667655:-_chrY:8673764|8673912:-_chrY:8674891|8674965:-_chrY:8677264|8677703:-","UN_AC016991.1_UP_LS0013","AC016991.1","pseudogene","no",6.69,0,0,0.022,207,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8677347|8678987:-","chrY:8667414|8667655:-_chrY:8673764|8673912:-_chrY:8674891|8674965:-_chrY:8677264|8677347:-_chrY:8678987|8679127:-","UN_AC016991.1_UP_LS0014","AC016991.1","pseudogene","no",5.95,0,0,0.001,13,0,0,"0(0)","PCPG","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8678085|8678357:+","chrY:8677738|8678085:+_chrY:8678357|8678431:+_chrY:8680756|8680915:+_chrY:8682347|8682508:+_chrY:8687218|8687534:+","UN_TTTY19_UP_LS0008","TTTY19","lncRNA gene","no",4.04,0,0,0.002,16,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8678431|8680756:+","chrY:8677738|8678085:+_chrY:8678357|8678431:+_chrY:8680756|8680915:+_chrY:8682347|8682508:+_chrY:8687218|8687534:+","UN_TTTY19_UP_LS0010","TTTY19","lncRNA gene","no",2.74,0,0,0.002,19,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8680915|8682347:+","chrY:8677738|8678085:+_chrY:8678357|8678431:+_chrY:8680756|8680915:+_chrY:8682347|8682508:+_chrY:8687218|8687534:+","UN_TTTY19_UP_LS0011","TTTY19","lncRNA gene","no",3.42,0,0,0.002,20,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8658690|8683370"]
["chrY:8682508|8687218:+","chrY:8677738|8678085:+_chrY:8678357|8678431:+_chrY:8680756|8680915:+_chrY:8682347|8682508:+_chrY:8687218|8687534:+","UN_TTTY19_UP_LS0012","TTTY19","lncRNA gene","no",3.02,0,0,0.002,15,0,0,"0(0)","MESO","no","NA","NA","intron_intersect_chrY:8658690|8683370","intron_intersect_chrY:8683878|8695281"]
["chrY:9002447|9003967:-","chrY:8995208|9002447:-_chrY:9003967|9004081:-_chrY:9004739|9004900:-_chrY:9026330|9026556:-_chrY:9026756|9026892:-","UN_AC007967.3_UP_LS0001","AC007967.3","pseudogene","no",2.75,0,0,0.005,46,0,0,"0(0)","READ","no","NA","NA","NA","NA"]
["chrY:9111109|9114161:+","chrY:9036483|9036530:+_chrY:9110938|9111109:+_chrY:9114161|9114298:+","UN_USP9YP22_UP_LS0003","USP9YP22","pseudogene","no",3.3,0,0,0.006,54,0,0,"0(0)","STAD","no","TE_intersect_:9111103|chrY|9111103|9111867|L1MB5:L1:LINE|212|-","TE_intersect_:9114135|chrY|9114135|9114319|AluSx1:Alu:SINE|206|-","NA","NA"]
["chrY:9338938|9339047:+","chrY:9337764|9338013:+_chrY:9338621|9338698:+_chrY:9338827|9338938:+_chrY:9339047|9339185:+_chrY:9339281|9339373:+_chrY:9340068|9340269:+","UN_TSPY4_LS0001","TSPY4","protein coding gene","no",20.69,0,0,0.007,70,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrY:9338827|9339373","exon_intersect_chrY:9338827|9339373"]
["chrY:9355190|9356514:-","chrY:9354846|9354994:-_chrY:9355081|9355190:-_chrY:9356514|9356814:-","FAM197Y8_LS006","FAM197Y8","pseudogene","no",0.14,0,0,0.002,18,0,0,"0(0)","TGCT","yes","NA","NA","exon_intersect_chrY:9356514|9356814","intron_intersect_chrY:9355190|9355387"]
["chrY:9357971|9358002:+","chrY:9356816|9357971:+_chrY:9358002|9358328:+_chrY:9358936|9359013:+_chrY:9359142|9359253:+_chrY:9359355|9359500:+_chrY:9359607|9359688:+_chrY:9360383|9360617:+","UN_TSPY8_LS0001","TSPY8","protein coding gene","no",4.17,0,0,0.001,11,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrY:9357797|9358328","exon_intersect_chrY:9357797|9358328"]
["chrY:9359253|9379633:+","chrY:9357797|9358328:+_chrY:9358936|9359013:+_chrY:9359142|9359253:+_chrY:9379633|9379778:+_chrY:9379885|9379966:+_chrY:9380661|9380870:+","UN_TSPY3_UP_LS0001","TSPY3","protein coding gene","no",0.17,0,0,0.008,79,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrY:9359142|9359688","exon_intersect_chrY:9379633|9379778"]
["chrY:9379531|9379640:+","chrY:9378122|9378606:+_chrY:9379214|9379291:+_chrY:9379420|9379531:+_chrY:9379640|9379778:+_chrY:9379885|9379966:+_chrY:9380661|9380870:+","UN_TSPY7P_LS0002","TSPY7P","pseudogene","no",20.21,0,0,0.007,71,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrY:9379531|9379633","exon_intersect_chrY:9379633|9379778"]
["chrY:9398952|9399560:+","chrY:9398421|9398952:+_chrY:9399560|9399637:+_chrY:9399766|9399877:+_chrY:9399979|9400124:+_chrY:9400231|9400312:+_chrY:9401007|9401217:+","TSPY3_LS001","TSPY3","protein coding gene","no",2.01,0.01,0,0.038,362,0.007,5,"0(0)","LIHC;LUSC","yes","NA","NA","intron_intersect_chrY:9398952|9399560","exon_intersect_chrY:9399560|9399637"]
["chrY:9399877|9399986:+","chrY:9398467|9398952:+_chrY:9399560|9399637:+_chrY:9399766|9399877:+_chrY:9399986|9400124:+_chrY:9400231|9400312:+_chrY:9401007|9401208:+","UN_TSPY3_LS0002","TSPY3","protein coding gene","no",16.81,0,0,0.007,68,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrY:9399766|9400312","exon_intersect_chrY:9399766|9400312"]
["chrY:9467087|9467349:+","chrY:9467001|9467087:+_chrY:9467349|9467486:+_chrY:9468094|9468171:+_chrY:9468300|9468411:+_chrY:9468513|9468658:+_chrY:9468765|9468846:+_chrY:9469539|9469748:+","UN_TSPY1_LS0001","TSPY1","protein coding gene","yes",2.29,0,0,0.011,107,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrY:9466955|9467486","exon_intersect_chrY:9466955|9467486"]
["chrY:9468411|9468520:+","chrY:9467227|9467486:+_chrY:9468094|9468171:+_chrY:9468300|9468411:+_chrY:9468520|9468658:+_chrY:9468765|9468846:+_chrY:9469539|9469763:+","UN_TSPY1_LS0003","TSPY1","protein coding gene","yes",28.7,0,0,0.007,65,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrY:9468411|9468513","exon_intersect_chrY:9468513|9468658"]
["chrY:9468846|9489871:+","chrY:9467001|9467087:+_chrY:9467349|9467486:+_chrY:9468094|9468171:+_chrY:9468300|9468411:+_chrY:9468513|9468658:+_chrY:9468765|9468846:+_chrY:9489871|9490081:+","UN_TSPY6P_UP_LS0002","TSPY6P","pseudogene","no",1.04,0,0,0.01,93,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrY:9468846|9469539","exon_intersect_chrY:9489871|9490081"]
["chrY:9488741|9488850:+","chrY:9487590|9487816:+_chrY:9488424|9488501:+_chrY:9488630|9488741:+_chrY:9488850|9488988:+_chrY:9489095|9489176:+_chrY:9489871|9490081:+","UN_TSPY9P_LS0001","TSPY9P","pseudogene","no",23.7,0,0,0.008,72,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrY:9488741|9488843","exon_intersect_chrY:9488843|9488988"]
["chrY:9508098|9508706:+","chrY:9507596|9507814:+_chrY:9507833|9508098:+_chrY:9508706|9508783:+_chrY:9508912|9509023:+_chrY:9509125|9509270:+_chrY:9509377|9509458:+_chrY:9510153|9510175:+","TSPY6P_LS002","TSPY6P","pseudogene","no",20.94,0.03,0.6,0.023,223,0.004,3,"0(6)","LUSC;TGCT","yes","NA","NA","intron_intersect_chrY:9508098|9508706","exon_intersect_chrY:9508706|9508783"]
["chrY:9508783|9508912:+","chrY:9507596|9507814:+_chrY:9507833|9508098:+_chrY:9508706|9508783:+_chrY:9508912|9509023:+_chrY:9509125|9509270:+_chrY:9509377|9509458:+_chrY:9510153|9510175:+","TSPY6P_LS003","TSPY6P","pseudogene","no",40.27,0.02,0,0.023,222,0.004,3,"0(0)","LUSC;TGCT","yes","NA","NA","intron_intersect_chrY:9508783|9508912","exon_intersect_chrY:9508912|9509023"]
["chrY:9509023|9509125:+","chrY:9507596|9507814:+_chrY:9507833|9508098:+_chrY:9508706|9508783:+_chrY:9508912|9509023:+_chrY:9509125|9509270:+_chrY:9509377|9509458:+_chrY:9510153|9510175:+","TSPY6P_LS004","TSPY6P","pseudogene","no",36.27,0.03,0,0.023,222,0.004,3,"0(0)","LUSC;TGCT","yes","NA","NA","intron_intersect_chrY:9509023|9509125","exon_intersect_chrY:9509125|9509270"]
["chrY:9509023|9509132:+","chrY:9507596|9507814:+_chrY:9507833|9508098:+_chrY:9508706|9508783:+_chrY:9508912|9509023:+_chrY:9509132|9509270:+_chrY:9509377|9509458:+_chrY:9510153|9510393:+","UN_TSPY6P_LS0002","TSPY6P","pseudogene","no",24.59,0,0,0.005,50,0,0,"0(0)","TGCT","no","NA","NA","intron_intersect_chrY:9509023|9509125","exon_intersect_chrY:9509125|9509270"]
["chrY:9509270|9509377:+","chrY:9507596|9507814:+_chrY:9507833|9508098:+_chrY:9508706|9508783:+_chrY:9508912|9509023:+_chrY:9509125|9509270:+_chrY:9509377|9509458:+_chrY:9510153|9510175:+","TSPY6P_LS005","TSPY6P","pseudogene","no",42.81,0.04,0,0.023,223,0.004,3,"0(0)","LUSC;TGCT","yes","NA","NA","intron_intersect_chrY:9509270|9509377","exon_intersect_chrY:9509377|9509458"]
["chrY:9509458|9510153:+","chrY:9507596|9507814:+_chrY:9507833|9508098:+_chrY:9508706|9508783:+_chrY:9508912|9509023:+_chrY:9509125|9509270:+_chrY:9509377|9509458:+_chrY:9510153|9510175:+","TSPY6P_LS006","TSPY6P","pseudogene","no",45.02,0.02,0,0.02,194,0.004,3,"0(0)","TGCT","yes","NA","NA","intron_intersect_chrY:9509458|9510153","exon_intersect_chrY:9510153|9510175"]
["chrY:9529336|9529445:+","chrY:9527926|9528411:+_chrY:9529019|9529096:+_chrY:9529225|9529336:+_chrY:9529445|9529583:+_chrY:9529690|9529771:+_chrY:9530466|9530667:+","UN_TSPY10_LS0001","TSPY10","protein coding gene","no",21.48,0,0,0.006,62,0,0,"0(0)","TGCT","no","NA","NA","exon_intersect_chrY:9529225|9529771","exon_intersect_chrY:9529225|9529771"]