gene_id	gene_short_name	cell_group	marker_score	mean_expression	fraction_expressing	specificity	pseudo_R2	marker_test_p_value	marker_test_q_value
1	ISG15	ISG15	ER+	0.296298890094503	0.00297620395267611	0.59653024911032	0.49670388138139	0.064894584910077	8.69159450256925e-54	1.4861235944273e-48
2	SH3BGRL3	SH3BGRL3	TNBC	0.270370055955058	0.0016544712099031	0.893908481492276	0.302458318220347	0.0191359305619594	8.7002078564993e-16	1.48759634013568e-10
3	IFI6	IFI6	ER+	0.26490154963867	0.00165428980655265	0.619884341637011	0.427340282445446	0.065892765814273	1.35406110950577e-54	2.31522784747735e-49
4	RPS8	RPS8	TNBC	0.264808557578348	0.0029550165249534	0.915476537452638	0.289257612560113	0.0117021609764246	3.23253483046139e-10	5.5271173545161e-05
5	TMSB10	TMSB10	ER+	0.273692377085576	0.00662485813978862	0.983096085409253	0.278398399858994	0.00536714427107349	9.81922023060748e-06	1
6	TMSB10	TMSB10	HER2+	0.309268956472627	0.00767584518442424	0.993446601941748	0.311309088851019	0.0570678969984466	2.24281291439043e-46	3.83485123354134e-41
7	TMSB10	TMSB10	TNBC	0.283529366610714	0.00691933484554762	0.985426989215972	0.287722347483395	0.0180856797797872	5.30268424534394e-15	9.06674163005889e-10
8	IGKC	IGKC	HER2+	0.294244656206018	0.00254925614575677	0.582766990291262	0.50490961414777	0.00523012017392309	1.61456742295777e-05	1
9	IL1B	IL1B	Normal	0.350021515866728	0.00301113476015814	0.626598465473146	0.558605766138329	0.0859738608592391	8.0088906542783e-28	1.36939215963112e-22
10	KYNU	KYNU	Normal	0.367592417269645	0.00045977579893478	0.629156010230179	0.584262744522079	0.205036343049053	2.2529113077032e-64	3.85211787036324e-59
11	PTMA	PTMA	HER2+	0.299419733085502	0.00393733445880251	0.979611650485437	0.30565146192078	0.0401917568080185	4.27437947756123e-33	7.3085050059133e-28
12	PTMA	PTMA	TNBC	0.272555851674576	0.00355221438821198	0.964150393471291	0.282690183523419	0.014726413376168	1.73314667715797e-12	2.96340351447179e-07
13	RPL32	RPL32	HER2+	0.2829737393937	0.00323236587382972	0.97378640776699	0.290591178041387	0.0156475524652711	8.34589317164509e-14	1.42701419806056e-08
14	ATP13A3	ATP13A3	Normal	0.356653829142074	0.000402103417165954	0.644501278772379	0.553379552359329	0.173864546715108	9.04084980885383e-55	1.54584066371706e-49
15	CXCL8	CXCL8	Normal	0.626699776866261	0.0136635597923688	0.856777493606138	0.731461530611069	0.325855075721015	6.994972822977e-102	1.1960284331639e-96
16	CXCL3	CXCL3	Normal	0.430052138150579	0.00296720432843485	0.652173913043478	0.659413278497555	0.143269701438845	2.26909091295483e-45	3.87978240660669e-40
17	CXCL2	CXCL2	Normal	0.373653824497863	0.00220533135654722	0.726342710997442	0.514431849924875	0.0560798636508216	1.1178201631499e-18	1.91129362776022e-13
18	ANXA5	ANXA5	Normal	0.4837160300356	0.00198031116872974	0.884910485933504	0.546627074404392	0.394734425513939	1.74856990867512e-123	2.98977477264906e-118
19	RPS3A	RPS3A	TNBC	0.270917655931413	0.00256128521343182	0.924220343923055	0.293131024125095	0.0141808212411864	4.44501601120191e-12	7.60026617659347e-07
20	ACSL1	ACSL1	Normal	0.360583755478645	0.000555499294345158	0.624040920716113	0.577820690131763	0.175262137881143	3.35916047450715e-55	5.7436269457313e-50
21	CD74	CD74	ER+	0.256993312436904	0.0118760606970343	0.889012455516014	0.289077291147441	0.00816896870238992	4.88403056426893e-08	0.00835091082000959
22	CD74	CD74	TNBC	0.35308943388066	0.0159779077353442	0.97376858058875	0.362600972057631	0.0552402165675623	1.00535141641299e-42	1.71899006583958e-37
23	RPS14	RPS14	HER2+	0.281124274298604	0.00346480361068147	0.978398058252427	0.287331185837323	0.0136474889454828	3.16099175664847e-12	5.40479014518782e-07
24	SQSTM1	SQSTM1	Normal	0.400509168417606	0.00112971282061094	0.820971867007673	0.48784761635914	0.207205173514898	4.82511438222895e-65	8.25017357531034e-60
25	HLA-A	HLA-A	ER+	0.255651121007159	0.00241348783535013	0.883007117437722	0.289523284646898	0.0141266254403063	7.1124303980167e-13	1.21611179917449e-07
26	HLA-A	HLA-A	TNBC	0.280445349666653	0.00262727297843897	0.908190032060624	0.308795890470567	0.0249469891811092	3.999363316218e-20	6.83827137260218e-15
27	IER3	IER3	Normal	0.378371675589837	0.00174848269810084	0.861892583120205	0.439000964853491	0.115337293553331	8.27644208765123e-37	1.41513917391496e-31
28	HLA-C	HLA-C	ER+	0.26304337050573	0.00199866680459549	0.862544483985765	0.304962092262445	0.0172671422557637	2.07336585908522e-15	3.54512388049828e-10
29	HLA-B	HLA-B	ER+	0.275140673043034	0.00340838630264365	0.939946619217082	0.292719466635466	0.0194936210858436	3.32768658581204e-17	5.68981163188485e-12
30	HLA-B	HLA-B	TNBC	0.311634844699229	0.00389364297601903	0.962110171961527	0.323907649852485	0.0522094523777344	1.8487899160728e-40	3.16113495009792e-35
31	HLA-DRA	HLA-DRA	TNBC	0.268005206327537	0.008034425971276	0.959778490236083	0.279236520774303	0.00379708252408143	0.000344323811288371	1
32	HLA-DRB1	HLA-DRB1	HER2+	0.282506565722311	0.0044137673787464	0.903398058252427	0.312715489192886	0.0213075183085997	2.92445733140075e-18	5.00035412352226e-13
33	HLA-DPA1	HLA-DPA1	TNBC	0.267719714988259	0.00362306634041618	0.852229670649956	0.314140335883966	0.0153342164851534	6.07312664556994e-13	1.03840748636613e-07
34	HLA-DPB1	HLA-DPB1	TNBC	0.267558722761524	0.00324729911413383	0.854561352375401	0.313094808251975	0.0124960548321395	8.17672578709036e-11	1.39808928197986e-05
35	RPS18	RPS18	HER2+	0.280494530557419	0.00440973192384321	0.979854368932039	0.286261448079407	0.012853337658241	1.34097936562383e-11	2.29286015851825e-06
36	EEF1A1	EEF1A1	TNBC	0.29754118739525	0.00663858405110895	0.964441853686972	0.308511276504413	0.028637074798235	7.08578471984188e-23	1.21155581453744e-17
37	SOD2	SOD2	Normal	0.513415110400844	0.00424883902938345	0.902813299232737	0.568683592540312	0.409043153279982	5.42482636039321e-128	9.27558510405473e-123
38	WTAP	WTAP	Normal	0.38238841261929	0.000675259465140758	0.705882352941177	0.541716917877327	0.209863023485197	7.2976256446216e-66	1.24777722321998e-60
39	ACTB	ACTB	ER+	0.287681854499342	0.0070263314209463	0.970640569395018	0.296383505460367	0.016135412820219	1.69691530312597e-14	2.90145366189691e-09
40	ACTB	ACTB	TNBC	0.330509580077867	0.00825183972594594	0.986592830078694	0.335000995346281	0.0455086257003611	1.86090836862763e-35	3.18185556501426e-30
41	HSPB1	HSPB1	ER+	0.262773567608165	0.00135401446124998	0.684830960854093	0.383705735617509	0.0230524884498083	4.53624837832257e-20	7.75625892719107e-15
42	TMSB4X	TMSB4X	HER2+	0.33524417476392	0.0194751955032803	0.998543689320388	0.335733106472375	0.108692646979857	2.58418722505633e-87	4.41854668489032e-82
43	TMSB4X	TMSB4X	TNBC	0.295191259921082	0.0164860310234597	0.998251238705917	0.295708383296127	0.0188665725772607	1.38295953851635e-15	2.36463953733679e-10
44	SAT1	SAT1	Normal	0.478728780753216	0.0129374095916789	0.964194373401535	0.496506507359436	0.407396067075127	1.7935228883445e-127	3.06663717540696e-122
45	RPL39	RPL39	HER2+	0.285893808437489	0.00412870465817829	0.98252427184466	0.290978876176496	0.0152896585100167	1.59845314960922e-13	2.73309913332783e-08
46	RPL10	RPL10	ER+	0.261907830336285	0.00551701270261652	0.965302491103203	0.271322028846069	0.00135907700759905	0.0261415009016627	1
47	RPL10	RPL10	HER2+	0.284691660609127	0.00593974431667125	0.992233009708738	0.286920166758709	0.0132811525672859	6.15542368593085e-12	1.0524789635152e-06
48	PLIN2	PLIN2	Normal	0.383721449643254	0.00140365035734736	0.78772378516624	0.487126905228936	0.136495702678862	2.71542558482713e-43	4.64294328196082e-38
49	TXN	TXN	Normal	0.421483943779116	0.00277040611923414	0.864450127877238	0.487574621353948	0.18729987582907	6.61401764592208e-59	1.13089119317034e-53
50	RPL35	RPL35	HER2+	0.287326730453101	0.00206372117590771	0.946601941747573	0.303534904991482	0.0375481739493293	5.10610972733035e-31	8.73063065617852e-26
51	RPL12	RPL12	HER2+	0.283412953075279	0.00280403305888922	0.964805825242718	0.293751287212616	0.018380510710378	5.86930069268431e-16	1.00355650963793e-10
52	IFITM3	IFITM3	ER+	0.268673105165646	0.00145054563523732	0.639457295373665	0.42015801072165	0.0490326689966564	5.57617020172367e-41	9.5343588577152e-36
53	RPL27A	RPL27A	HER2+	0.298638259615912	0.00247161411900761	0.952184466019418	0.313634878821707	0.0468727675284284	2.38795286719754e-38	4.08301733044905e-33
54	FTH1	FTH1	Normal	0.465006208939719	0.0661264016966661	1	0.465006208939719	0.324616164133178	1.70546427194198e-101	2.91607103073728e-96
55	NEAT1	NEAT1	Normal	0.353506132776493	0.00565901772852643	0.923273657289003	0.382883373727448	0.0819302986146169	1.38131772366976e-26	2.3618322966395e-21
56	MALAT1	MALAT1	Normal	0.45291293243451	0.0947589102814414	0.997442455242967	0.45407424764588	0.337970903969341	1.13984616617577e-105	1.94895456877397e-100
57	RPS25	RPS25	HER2+	0.2836051535345	0.00190341843008186	0.94004854368932	0.301692030096086	0.0199859988172381	3.20115052701904e-17	5.47345521711824e-12
58	VIM	VIM	TNBC	0.300437832139992	0.00316203947187733	0.947537161177499	0.317072347607601	0.0273182688212799	6.81795557924864e-22	1.16576131676225e-16
59	SRGN	SRGN	Normal	0.36389757328623	0.00440527485832784	0.936061381074169	0.388753964904142	0.156949769829546	1.4320027938065e-49	2.44849565696211e-44
60	GAPDH	GAPDH	TNBC	0.307179800877003	0.00308842234947717	0.92713494607986	0.331321564542281	0.0408027013968473	6.03099636356011e-32	1.03120388222696e-26
61	RPL41	RPL41	HER2+	0.284767453485356	0.00503714572841441	0.988349514563107	0.288124240756303	0.0216425368083341	1.59459586605654e-18	2.72650379561811e-13
62	LYZ	LYZ	TNBC	0.321765392387693	0.00408401753806956	0.820169046925095	0.392315942175613	0.0540699425841215	7.53152114440835e-42	1.28776961135552e-36
63	AC020656.1	AC020656.1	HER2+	0.286206655939608	0.00102017149164077	0.466504854368932	0.613512706800825	0.104509547437187	5.62069773294088e-84	9.61049381169163e-79
64	BTG1	BTG1	Normal	0.351975216156551	0.00211693414755157	0.864450127877238	0.407166596204767	0.120853220090888	1.69188983628734e-38	2.89286091767755e-33
65	TPT1	TPT1	Normal	0.364338143536107	0.00608127662564939	0.989769820971867	0.368103912461545	0.133660133928372	2.01074760852203e-42	3.43805669095531e-37
66	FOS	FOS	ER+	0.286734329613621	0.00311303764266699	0.808496441281139	0.354651319379048	0.0260940677430269	1.6196359651046e-22	2.76931835857445e-17
67	THBS1	THBS1	Normal	0.37211614788478	0.00144475059277271	0.49616368286445	0.749986669190459	0.208581489732706	1.81444659443876e-65	3.10241336503517e-60
68	SERF2	SERF2	HER2+	0.286144213500663	0.00233555470769494	0.952184466019418	0.30051342330429	0.0373188644414362	7.73116735227071e-31	1.32190591856065e-25
69	B2M	B2M	ER+	0.284737963792312	0.0153845316075557	0.998220640569395	0.285245518094973	0.0175939185127267	1.13024747231201e-15	1.93254233805797e-10
70	B2M	B2M	TNBC	0.293498534880605	0.0159927989853735	0.999125619352958	0.29375538890763	0.0251816195220685	2.67295667406778e-20	4.57032823958805e-15
71	RPS2	RPS2	HER2+	0.280019163622891	0.00360725147950764	0.959466019417476	0.291848963856896	0.014607995078507	5.51413858449715e-13	9.4282947173166e-08
72	RPS15A	RPS15A	HER2+	0.281087199746394	0.00266658826871368	0.958252427184466	0.293333146645173	0.0181593601388961	8.76336675338595e-16	1.49839550096094e-10
73	MT2A	MT2A	Normal	0.439984114194451	0.00608894733551843	0.900255754475703	0.488732354119404	0.105334151475328	9.55682785347899e-34	1.63406465369925e-28
74	COTL1	COTL1	TNBC	0.265043853088969	0.000841128463040921	0.711162926260565	0.372690762273874	0.0471795260448769	1.05366990824784e-36	1.80160695591848e-31
75	PFN1	PFN1	TNBC	0.317596096378257	0.0023244283351492	0.926552025648499	0.342772005874111	0.066156105882111	6.84387235508698e-51	1.17019267076219e-45
76	H3F3B	H3F3B	ER+	0.253883709422045	0.00217869906753763	0.864991103202847	0.293510197367321	0.00915368778282487	7.67898922199383e-09	0.00131298429313339
77	H3F3B	H3F3B	TNBC	0.26993828807571	0.00213527406066898	0.933838531040513	0.289063129334507	0.0107780889853636	1.6047110503017e-09	0.000274379914224786
78	ACTG1	ACTG1	TNBC	0.274869844333526	0.00166438890332522	0.89594870300204	0.306791944017023	0.0141288197964554	4.86263470458651e-12	8.3143273232902e-07
79	CST3	CST3	ER+	0.406288220249028	0.00705709390597518	0.899466192170818	0.45169926761613	0.0565385952420991	4.91252536002847e-47	8.39963236159108e-42
80	ATP5F1E	ATP5F1E	HER2+	0.305000470201527	0.00197716166913754	0.871116504854369	0.350125922883892	0.0894779195131907	5.15249625144806e-72	8.80994419057595e-67
81	RPS15	RPS15	ER+	0.259637647778964	0.00281706318100407	0.933274021352313	0.278200873311302	0.0057991450288877	4.31202954599855e-06	0.737288059893017
82	RPS15	RPS15	HER2+	0.300476112439279	0.00320609184636776	0.979126213592233	0.306881899665303	0.0573162618037244	1.42903183857095e-46	2.44341579886216e-41
83	RPS28	RPS28	HER2+	0.282848998578787	0.00321885808586527	0.973543689320388	0.290535495922365	0.0177870060550081	1.72117096715264e-15	2.94292696647627e-10
84	TYROBP	TYROBP	ER+	0.297738399587568	0.00299927858622498	0.911921708185053	0.326495571840416	0.0393557576823766	3.47226813768565e-33	5.93702295254043e-28
85	TYROBP	TYROBP	TNBC	0.271757748054438	0.00261589742619031	0.923637423491693	0.294225570708355	0.0199722911964621	2.06402036256205e-16	3.52914457672309e-11
86	APOE	APOE	ER+	0.253491057190025	0.00692191300112528	0.711966192170818	0.356043671704577	0.0363261975995815	9.51921659576533e-31	1.62763373041034e-25
87	FTL	FTL	HER2+	0.314491075725057	0.0476014929173834	0.997815533980583	0.315179574796214	0.0175811923798198	2.49968575339092e-15	4.27406268857792e-10
88	RPL28	RPL28	ER+	0.254362088813309	0.00322592842376048	0.933051601423488	0.272613099238292	0.00215488134834401	0.00509885528290704	1
89	RPL28	RPL28	TNBC	0.265349028656781	0.00339765176031061	0.935878752550277	0.283529279763754	0.0101313962575383	4.93314963287289e-09	0.000843489656827138
90	LGALS1	LGALS1	HER2+	0.286768848464926	0.00281954302406684	0.887378640776699	0.323164019604895	0.0332047548069184	1.31795805575944e-27	2.25349740205972e-22
91	SAMSN1	SAMSN1	Normal	0.384587834380116	0.00091531560300101	0.751918158567775	0.511475657287842	0.196174626768598	1.21828912828249e-61	2.08307948310253e-56
92	ETS2	ETS2	Normal	0.375883223818377	0.000495370093860132	0.687979539641944	0.54635814317095	0.18192439666531	2.99082135349944e-57	5.11382598306748e-52
93	MT-ND2	MT-ND2	ER+	0.264576446484153	0.00294350915526144	0.929270462633452	0.284714146336226	0.00720862169630222	2.9844921706607e-07	0.051030040930825
94	MT-CO1	MT-CO1	ER+	0.277435884261757	0.00987081394509186	0.989101423487544	0.280492857126346	0.00457271176568565	4.49233235842088e-05	1
95	MT-CO1	MT-CO1	TNBC	0.271983575598764	0.00977336318102772	0.976974642961236	0.278393689701479	0.00549464548037835	1.65960716337611e-05	1
96	MT-CO2	MT-CO2	ER+	0.323345645507717	0.00915704452242117	0.995329181494662	0.324863021721273	0.0705446602346157	2.32290579254688e-58	3.97179724032835e-53
97	MT-CO3	MT-CO3	ER+	0.272282709314105	0.0072295696157465	0.982428825622776	0.277152606084722	0.00259387234853051	0.00211999468499009	1
98	MT-ND3	MT-ND3	HER2+	0.280948283489566	0.00400936544179423	0.960436893203883	0.292521336360124	0.00660427122237999	1.25694143818796e-06	0.21491687486713
99	MT-ND4	MT-ND4	ER+	0.291334958773714	0.00514421294714111	0.969083629893238	0.30062932629025	0.0216693323486959	5.88876786504062e-19	1.00688508463611e-13
100	MT-CYB	MT-CYB	ER+	0.292410549434949	0.00401510912494511	0.937722419928826	0.311830604900268	0.0250931157293295	1.03438731578185e-21	1.76863680801643e-16