{"text_format":"3","workbook":"xlsx","n_sheets":4,"sheets":["(A) roots SA_roots SY_DEGs","(B) leaves SA_roots SA_DEGs","(C) leaves SY_roots SY_DEGs","(D) leaves SA_leaves SY_DEGs"],"read":"whole","date_system":"1900"}

{"sheet":"(A) roots SA_roots SY_DEGs","index":0,"n_rows":466,"n_cols":21,"rows_kept":466}
["Table S3 (A). Differently expressed genes in the comparison between roots of S. abrotanoides and roots of S. yangii"]
[]
["Row.names","sampleA","sampleB","log2FoldChange","pvalue","padj","transcript_id","sprot_Top_BLASTX_hit","RNAMMER","prot_id","prot_coords","sprot_Top_BLASTP_hit","Pfam","SignalP","TmHMM","eggnog","Kegg","gene_ontology_blast","gene_ontology_pfam","transcript","peptide"]
["TRINITY_DN47661_c2_g5","roots S.abrotanoides","roots S. yangii",6.16190658800535,"0.000658788681292754","0.00138995805663376","TRINITY_DN47661_c2_g5_i1","MD37C_ARATH^MD37C_ARATH^Q:52-537,H:330-489^72.84%ID^E:7e-75^RecName: Full=Probable mediator of RNA polymerase II transcription subunit 37c;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47661_c2_g5_i1.p1","58-537[+]","MD37C_ARATH^MD37C_ARATH^Q:1-160,H:332-489^72.5%ID^E:7e-74^RecName: Full=Probable mediator of RNA polymerase II transcription subunit 37c;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00012.17^HSP70^Hsp70 protein^1-160^E:1.5e-59",".",".","COG0443^Heat shock protein","KEGG:ath:AT3G12580`KO:K03283","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005829^cellular_component^cytosol`GO:0005794^cellular_component^Golgi apparatus`GO:0005739^cellular_component^mitochondrion`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0005524^molecular_function^ATP binding`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0016567^biological_process^protein ubiquitination`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009617^biological_process^response to bacterium`GO:0046686^biological_process^response to cadmium ion`GO:0009408^biological_process^response to heat`GO:0009644^biological_process^response to high light intensity`GO:0042542^biological_process^response to hydrogen peroxide`GO:0009266^biological_process^response to temperature stimulus`GO:0009615^biological_process^response to virus`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44227_c3_g1","roots S.abrotanoides","roots S. yangii",5.72027972983378,"0.00163453513226577","0.00324687516924767","TRINITY_DN44227_c3_g1_i16","UBIQP_HORVU^UBIQP_HORVU^Q:590-159,H:28-171^94.44%ID^E:3e-92^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:443-162,H:1-94^97.87%ID^E:3e-57^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:859-770,H:65-94^93.33%ID^E:4e-10^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:859-770,H:141-170^93.33%ID^E:4e-10^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN44227_c3_g1_i16.p1","156-974[-]","UBIQP_HORVU^UBIQP_HORVU^Q:116-272,H:15-171^88.54%ID^E:3e-96^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:178-271,H:1-94^97.87%ID^E:8e-59^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum","PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^125-190^E:2.5e-13`PF00240.20^ubiquitin^Ubiquitin family^126-193^E:6.1e-29`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^134-188^E:0.0016`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^134-190^E:0.15`PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^196-266^E:2.3e-15`PF00240.20^ubiquitin^Ubiquitin family^198-269^E:3.6e-33`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^207-264^E:0.00034`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^209-266^E:0.13",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46620_c1_g1","roots S.abrotanoides","roots S. yangii",5.23594901532472,"0.0053423973110173","0.00974105476815024","TRINITY_DN46620_c1_g1_i12","CYP1_SOYBN^CYP1_SOYBN^Q:575-180,H:39-170^84.09%ID^E:4e-64^RecName: Full=Peptidyl-prolyl cis-trans isomerase 1 {ECO:0000250|UniProtKB:O49886};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46620_c1_g1_i12.p2","174-575[-]","CP19B_ARATH^CP19B_ARATH^Q:1-133,H:40-172^81.2%ID^E:3e-75^RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^16-130^E:4e-38",".",".","COG0652^peptidyl-prolyl cis-trans isomerase activity","KEGG:ath:AT2G21130`KO:K01802","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN45380_c15_g3","roots S.abrotanoides","roots S. yangii",4.94453891520833,"0.0212939919371695","0.0346459808255083","TRINITY_DN45380_c15_g3_i1","UBIQP_HORVU^UBIQP_HORVU^Q:1-324,H:2-109^95.37%ID^E:3e-66^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:1-279,H:78-170^94.62%ID^E:2e-55^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:226-324,H:1-33^100%ID^E:1e-13^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN45380_c15_g3_i1.p1","1-345[+]","UBIQP_HORVU^UBIQP_HORVU^Q:1-108,H:2-109^95.37%ID^E:1e-66^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:1-93,H:78-170^94.62%ID^E:7e-56^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:76-108,H:1-33^100%ID^E:7e-14^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum","PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^18-88^E:8.7e-17`PF00240.20^ubiquitin^Ubiquitin family^20-91^E:5.5e-34`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^32-86^E:5.3e-05`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^32-88^E:0.0027",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47755_c1_g4","roots S.abrotanoides","roots S. yangii",4.89755249696745,"0.0300222877951479","0.0474491059044193","TRINITY_DN47755_c1_g4_i1","Y4885_ARATH^Y4885_ARATH^Q:3-263,H:226-312^43.68%ID^E:3e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-263,H:514-600^37.93%ID^E:3e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-266,H:250-337^36.36%ID^E:2e-09^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-263,H:178-264^37.93%ID^E:3e-08^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-266,H:346-433^34.09%ID^E:3e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-263,H:298-384^34.48%ID^E:4e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-263,H:154-240^37.93%ID^E:1e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-245,H:322-402^29.63%ID^E:2e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-263,H:274-360^33.33%ID^E:3e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-263,H:538-624^34.48%ID^E:3e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:3-233,H:370-446^35.06%ID^E:5e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47755_c1_g4_i1.p1","3-368[+]","FLS2_ARATH^FLS2_ARATH^Q:1-95,H:515-609^41.05%ID^E:2e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:228-322^44.21%ID^E:1e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:587-683^38.14%ID^E:6e-11^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:132-226^37.89%ID^E:2e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-110,H:637-774^32.61%ID^E:7e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:204-298^36.84%ID^E:1e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:467-561^35.79%ID^E:1e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:372-465^33.68%ID^E:1e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:180-274^35.79%ID^E:2e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:324-418^37.89%ID^E:5e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-121,H:685-803^31.97%ID^E:1e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:276-370^32.63%ID^E:2e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:18-95,H:77-154^37.18%ID^E:2e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:252-346^36.84%ID^E:2e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:443-537^34.74%ID^E:4e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-95,H:156-250^31.58%ID^E:8e-06^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G46330`KO:K13420","GO:0005768^cellular_component^endosome`GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004675^molecular_function^transmembrane receptor protein serine/threonine kinase activity`GO:0052544^biological_process^defense response by callose deposition in cell wall`GO:0042742^biological_process^defense response to bacterium`GO:0016045^biological_process^detection of bacterium`GO:0006898^biological_process^receptor-mediated endocytosis`GO:0010359^biological_process^regulation of anion channel activity`GO:0007178^biological_process^transmembrane receptor protein serine/threonine kinase signaling pathway",".",".","."]
["TRINITY_DN43272_c0_g1","roots S.abrotanoides","roots S. yangii",4.82633369473501,"0.0128027090080813","0.0217896383258086","TRINITY_DN43272_c0_g1_i1","ADT_PARKE^ADT_PARKE^Q:20-913,H:33-326^45.82%ID^E:2e-84^RecName: Full=ADP,ATP carrier protein;^Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellales incertae sedis; Parachlorella",".","TRINITY_DN43272_c0_g1_i1.p1","98-931[+]","ADT_PARKE^ADT_PARKE^Q:1-272,H:59-326^45.79%ID^E:1e-76^RecName: Full=ADP,ATP carrier protein;^Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellales incertae sedis; Parachlorella","PF00153.24^Mito_carr^Mitochondrial carrier protein^1-79^E:9.3e-13`PF00153.24^Mito_carr^Mitochondrial carrier protein^86-175^E:1.4e-20`PF00153.24^Mito_carr^Mitochondrial carrier protein^186-275^E:1.3e-14",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005215^molecular_function^transporter activity`GO:0055085^biological_process^transmembrane transport",".",".","."]
["TRINITY_DN46130_c2_g1","roots S.abrotanoides","roots S. yangii",4.06948002292321,"0.000550231397701615","0.00117313390731535","TRINITY_DN46130_c2_g1_i1","RLP12_ARATH^RLP12_ARATH^Q:5-313,H:463-569^46.73%ID^E:6e-17^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:20-283,H:659-747^33.33%ID^E:3e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2-223,H:677-751^34.67%ID^E:8e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46130_c2_g1_i1.p1","2-316[+]","RLP12_ARATH^RLP12_ARATH^Q:2-104,H:463-569^46.73%ID^E:6e-17^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:7-94,H:659-747^33.33%ID^E:3e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:1-74,H:677-751^34.67%ID^E:8e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^8-27^E:0.28`PF13516.3^LRR_6^Leucine Rich repeat^52-68^E:0.15`PF00560.30^LRR_1^Leucine Rich Repeat^54-76^E:0.0024",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G71400","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43997_c4_g5","roots S.abrotanoides","roots S. yangii",3.98111038226908,0,0,"TRINITY_DN43997_c4_g5_i4","GCH1_SOLLC^GCH1_SOLLC^Q:1875-3029,H:69-452^70.62%ID^E:9e-166^RecName: Full=GTP cyclohydrolase 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon`GCH1_SOLLC^GCH1_SOLLC^Q:706-912,H:1-69^68.12%ID^E:9e-14^RecName: Full=GTP cyclohydrolase 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN43997_c4_g5_i4.p2","3295-3816[-]","GENL2_ARATH^GENL2_ARATH^Q:21-171,H:268-420^55.56%ID^E:1e-52^RecName: Full=Flap endonuclease GEN-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0258^Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double- stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA (By similarity)","KEGG:ath:AT3G48900`KO:K15338","GO:0005634^cellular_component^nucleus`GO:0008821^molecular_function^crossover junction endodeoxyribonuclease activity`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0006281^biological_process^DNA repair",".",".","."]
["TRINITY_DN44906_c3_g4","roots S.abrotanoides","roots S. yangii",3.89172049661627,{"v":6440453942.90643,"d":"6.44E+09"},"0.000154957998466157","TRINITY_DN44906_c3_g4_i2","CYSP_PEA^CYSP_PEA^Q:584-3,H:46-238^43.22%ID^E:5e-39^RecName: Full=Cysteine proteinase 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44906_c3_g4_i2.p1","3-668[-]","CYSP_PEA^CYSP_PEA^Q:29-222,H:46-238^42.64%ID^E:2e-44^RecName: Full=Cysteine proteinase 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^31-87^E:4.7e-12`PF00112.20^Peptidase_C1^Papain family cysteine protease^116-220^E:3.4e-30","sigP:1^18^0.788^YES",".",".",".","GO:0008234^molecular_function^cysteine-type peptidase activity","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN27159_c0_g1","roots S.abrotanoides","roots S. yangii",3.88711386652773,"0.00140435594520952","0.00281869904928519","TRINITY_DN27159_c0_g1_i1","RL261_ARATH^RL261_ARATH^Q:474-85,H:1-133^76.69%ID^E:8e-58^RecName: Full=60S ribosomal protein L26-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN27159_c0_g1_i1.p1","31-528[-]","RL261_ARATH^RL261_ARATH^Q:19-148,H:1-133^76.69%ID^E:3e-69^RecName: Full=60S ribosomal protein L26-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16906.2^Ribosomal_L26^Ribosomal proteins L26 eukaryotic, L24P archaeal^26-139^E:5.2e-37`PF00467.26^KOW^KOW motif^69-100^E:1.2e-08",".",".","COG0198^One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (By similarity)","KEGG:ath:AT3G49910`KO:K02898","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009409^biological_process^response to cold`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0015934^cellular_component^large ribosomal subunit",".","."]
["TRINITY_DN3386_c0_g1","roots S.abrotanoides","roots S. yangii",3.78208396464914,"0.00290586852400882","0.00555506790020049","TRINITY_DN3386_c0_g1_i2","RL44B_YEAST^RL44B_YEAST^Q:403-167,H:20-97^74.68%ID^E:3e-22^RecName: Full=60S ribosomal protein L42-B;^Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces",".","TRINITY_DN3386_c0_g1_i2.p1","152-454[-]","RL44_CHLRE^RL44_CHLRE^Q:1-96,H:1-95^68.75%ID^E:4e-39^RecName: Full=60S ribosomal protein L44;^Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas","PF00935.16^Ribosomal_L44^Ribosomal protein L44^17-93^E:2.1e-30",".",".","COG1631^Ribosomal protein","KEGG:cre:CHLREDRAFT_128309`KO:K02929","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0046677^biological_process^response to antibiotic`GO:0046898^biological_process^response to cycloheximide`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45113_c0_g1","roots S.abrotanoides","roots S. yangii",3.68868389859275,0,0,"TRINITY_DN45113_c0_g1_i1","14KD_DAUCA^14KD_DAUCA^Q:135-395,H:50-136^73.56%ID^E:2e-27^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45113_c0_g1_i1.p1","45-401[+]","14KD_DAUCA^14KD_DAUCA^Q:1-117,H:1-136^54.41%ID^E:8e-41^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF14547.3^Hydrophob_seed^Hydrophobic seed protein^35-118^E:1.8e-28`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^35-117^E:1.2e-07","sigP:1^25^0.938^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN46093_c4_g1","roots S.abrotanoides","roots S. yangii",3.66826340501357,0,0,"TRINITY_DN46093_c4_g1_i3","E13B_PRUPE^E13B_PRUPE^Q:1017-811,H:282-349^56.52%ID^E:4e-17^RecName: Full=Glucan endo-1,3-beta-glucosidase, basic isoform;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN46093_c4_g1_i3.p1","805-1149[-]","E13B_PRUPE^E13B_PRUPE^Q:32-113,H:262-349^48.31%ID^E:4e-20^RecName: Full=Glucan endo-1,3-beta-glucosidase, basic isoform;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^47-113^E:1e-20",".",".",".",".","GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN40566_c2_g1","roots S.abrotanoides","roots S. yangii",3.65608679873573,"0.00505779851353538","0.00927113745763249","TRINITY_DN40566_c2_g1_i1","RL112_ARATH^RL112_ARATH^Q:577-71,H:4-173^71.18%ID^E:6e-82^RecName: Full=60S ribosomal protein L11-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40566_c2_g1_i1.p1","59-634[-]","RL112_ARATH^RL112_ARATH^Q:20-188,H:4-173^71.18%ID^E:2e-82^RecName: Full=60S ribosomal protein L11-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00281.16^Ribosomal_L5^Ribosomal protein L5^24-77^E:6.7e-20`PF00673.18^Ribosomal_L5_C^ribosomal L5P family C-terminus^81-160^E:8.2e-22",".",".","COG0094^This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits","KEGG:ath:AT3G58700`KEGG:ath:AT4G18730`KEGG:ath:AT5G45775`KO:K02868","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0005773^cellular_component^vacuole`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0000027^biological_process^ribosomal large subunit assembly`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN39175_c0_g1","roots S.abrotanoides","roots S. yangii",3.62823414948109,"0.0056774530870693","0.0103069142164774","TRINITY_DN39175_c0_g1_i2","RS26B_SCHPO^RS26B_SCHPO^Q:9-302,H:1-98^74.49%ID^E:2e-46^RecName: Full=40S ribosomal protein S26-B;^Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces",".","TRINITY_DN39175_c0_g1_i2.p1","3-353[+]","RS263_ARATH^RS263_ARATH^Q:3-113,H:1-111^69.37%ID^E:5e-50^RecName: Full=40S ribosomal protein S26-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01283.16^Ribosomal_S26e^Ribosomal protein S26e^3-108^E:4.9e-51",".",".","COG4830^Ribosomal protein","KEGG:ath:AT3G56340`KO:K02976","GO:0022626^cellular_component^cytosolic ribosome`GO:0022627^cellular_component^cytosolic small ribosomal subunit`GO:0016020^cellular_component^membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46757_c1_g6","roots S.abrotanoides","roots S. yangii",3.54962459241576,{"v":5396790449.00718,"d":"5.40E+09"},"0.000131305922967354","TRINITY_DN46757_c1_g6_i1","FRS5_ARATH^FRS5_ARATH^Q:619-1422,H:121-392^23.21%ID^E:2e-10^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46757_c1_g6_i1.p1","718-1869[+]","FRS5_ARATH^FRS5_ARATH^Q:5-235,H:156-392^23.87%ID^E:2e-11^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10551.6^MULE^MULE transposase domain^141-236^E:2.1e-26",".",".","ENOG410ZJSX^protein FAR1-RELATED SEQUENCE 5-like","KEGG:ath:AT4G38180","GO:0005634^cellular_component^nucleus`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN45155_c5_g2","roots S.abrotanoides","roots S. yangii",3.49941713167324,"0.00809056520205626","0.0142857989326753","TRINITY_DN45155_c5_g2_i4","HSP70_SOYBN^HSP70_SOYBN^Q:575-168,H:481-616^66.91%ID^E:1e-53^RecName: Full=Heat shock 70 kDa protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN45155_c5_g2_i4.p1","12-575[-]","HSP71_SOLLC^HSP71_SOLLC^Q:1-187,H:484-650^56.15%ID^E:2e-59^RecName: Full=Heat shock cognate 70 kDa protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00012.17^HSP70^Hsp70 protein^1-136^E:2.2e-28",".",".","COG0443^Heat shock protein",".","GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN45382_c0_g1","roots S.abrotanoides","roots S. yangii",3.48472470408798,"0.00853120823267553","0.0150022335722315","TRINITY_DN45382_c0_g1_i1","Y2317_ARATH^Y2317_ARATH^Q:302-9,H:255-352^46.94%ID^E:9e-19^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:287-3,H:92-186^35.79%ID^E:2e-11^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:302-3,H:207-306^35%ID^E:3e-11^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:305-3,H:278-402^35.2%ID^E:2e-09^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:293-9,H:546-640^35.79%ID^E:5e-09^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:305-12,H:110-207^35.71%ID^E:7e-09^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:287-3,H:428-522^30.53%ID^E:2e-07^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:302-39,H:351-438^37.5%ID^E:3e-07^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:287-3,H:236-330^36.84%ID^E:4e-07^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:272-3,H:481-570^28.89%ID^E:1e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:305-3,H:398-498^34.65%ID^E:3e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:302-9,H:135-232^31.63%ID^E:5e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45382_c0_g1_i1.p1","3-305[-]","Y2317_ARATH^Y2317_ARATH^Q:2-99,H:255-352^46.94%ID^E:8e-19^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:7-101,H:92-186^35.79%ID^E:2e-11^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:2-101,H:207-306^35%ID^E:3e-11^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:1-101,H:278-402^35.2%ID^E:1e-09^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:5-99,H:546-640^35.79%ID^E:4e-09^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:1-98,H:110-207^35.71%ID^E:7e-09^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:7-101,H:428-522^30.53%ID^E:2e-07^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:2-89,H:351-438^37.5%ID^E:3e-07^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:7-101,H:236-330^36.84%ID^E:4e-07^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:12-101,H:481-570^28.89%ID^E:1e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:1-101,H:398-498^34.65%ID^E:2e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2317_ARATH^Y2317_ARATH^Q:2-99,H:135-232^31.63%ID^E:5e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At2g33170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^1-60^E:4.3e-09`PF13516.3^LRR_6^Leucine Rich repeat^23-36^E:0.75`PF00560.30^LRR_1^Leucine Rich Repeat^26-47^E:1.5",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT2G33170","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44987_c3_g4","roots S.abrotanoides","roots S. yangii",3.43273944849678,"0.0111691561886731","0.0192059445546012","TRINITY_DN44987_c3_g4_i1","R1C3_SOLDE^R1C3_SOLDE^Q:11-325,H:665-766^42.86%ID^E:8e-14^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44987_c3_g4_i1.p1","2-328[+]","R1C3_SOLDE^R1C3_SOLDE^Q:4-108,H:665-766^42.86%ID^E:2e-19^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^3-109^E:1e-22",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN4931_c0_g1","roots S.abrotanoides","roots S. yangii",3.37694525924802,"0.000121977049476496","0.0002835644179568","TRINITY_DN4931_c0_g1_i1","PME68_ARATH^PME68_ARATH^Q:1223-144,H:3-362^73.61%ID^E:0^RecName: Full=Probable pectinesterase 68;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN4931_c0_g1_i1.p1","141-1220[-]","PME68_ARATH^PME68_ARATH^Q:1-359,H:4-362^74.72%ID^E:0^RecName: Full=Probable pectinesterase 68;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01095.16^Pectinesterase^Pectinesterase^58-350^E:9.8e-62","sigP:1^34^0.674^YES",".","COG4677^pectinesterase","KEGG:ath:AT5G47500","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0045330^molecular_function^aspartyl esterase activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0045490^biological_process^pectin catabolic process","GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0005618^cellular_component^cell wall",".","."]
["TRINITY_DN44902_c0_g2","roots S.abrotanoides","roots S. yangii",3.37040404487136,0,0,"TRINITY_DN44902_c0_g2_i1","BG4_ARATH^BG4_ARATH^Q:1-159,H:202-255^46.3%ID^E:4e-06^RecName: Full=Probable glucan endo-1,3-beta-glucosidase BG4 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44902_c0_g2_i1.p1","1-381[+]","BG3_ARATH^BG3_ARATH^Q:1-127,H:199-294^30.47%ID^E:2e-07^RecName: Full=Probable glucan endo-1,3-beta-glucosidase BG3 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^2-53^E:3.2e-09",".",".","ENOG410YAHP^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT3G57240","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005783^cellular_component^endoplasmic reticulum`GO:0008810^molecular_function^cellulase activity`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0009617^biological_process^response to bacterium","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN40318_c0_g1","roots S.abrotanoides","roots S. yangii",3.27583636701126,{"v":9294769601.68614,"d":"9.29E+09"},"0.000219252982220948","TRINITY_DN40318_c0_g1_i1","RL30_EUPES^RL30_EUPES^Q:61-393,H:1-111^77.48%ID^E:2e-52^RecName: Full=60S ribosomal protein L30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Euphorbioideae; Euphorbieae; Euphorbia; Esula; Euphorbia sect. Esula",".","TRINITY_DN40318_c0_g1_i1.p1","61-447[+]","RL30_LUPLU^RL30_LUPLU^Q:1-111,H:1-111^77.48%ID^E:2e-60^RecName: Full=60S ribosomal protein L30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Genisteae; Lupinus","PF01248.23^Ribosomal_L7Ae^Ribosomal protein L7Ae/L30e/S12e/Gadd45 family^13-105^E:2.7e-24",".",".",".",".","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN37251_c0_g1","roots S.abrotanoides","roots S. yangii",3.24605997997672,"0.00200302291767969","0.00392609353510264","TRINITY_DN37251_c0_g1_i1","SBT3I_ARATH^SBT3I_ARATH^Q:2349-151,H:30-765^51.34%ID^E:0^RecName: Full=Subtilisin-like protease SBT3.18 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37251_c0_g1_i1.p1","109-2436[-]","SBT3I_ARATH^SBT3I_ARATH^Q:8-765,H:3-768^50.26%ID^E:0^RecName: Full=Subtilisin-like protease SBT3.18 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05922.13^Inhibitor_I9^Peptidase inhibitor I9^30-109^E:1e-13`PF00082.19^Peptidase_S8^Subtilase family^135-598^E:9e-45",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT4G26330","GO:0005618^cellular_component^cell wall`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0009567^biological_process^double fertilization forming a zygote and endosperm","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46240_c1_g1","roots S.abrotanoides","roots S. yangii",3.21495828984752,"0.000296350168706977","0.000656230786482933","TRINITY_DN46240_c1_g1_i1","E132_ARATH^E132_ARATH^Q:53-1405,H:23-471^59.91%ID^E:0^RecName: Full=Glucan endo-1,3-beta-glucosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46240_c1_g1_i1.p1","2-1525[+]","E132_ARATH^E132_ARATH^Q:18-474,H:23-477^59.57%ID^E:0^RecName: Full=Glucan endo-1,3-beta-glucosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^27-349^E:1e-76`PF07983.10^X8^X8 domain^366-436^E:4.9e-18","sigP:1^22^0.774^YES",".","ENOG410ZF4V^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT1G66250","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN39501_c0_g2","roots S.abrotanoides","roots S. yangii",3.12833965395256,"0.000502942121533345","0.00107873691700032","TRINITY_DN39501_c0_g2_i2","LBD4_ARATH^LBD4_ARATH^Q:94-444,H:1-116^91.45%ID^E:2e-57^RecName: Full=LOB domain-containing protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39501_c0_g2_i2.p1","94-444[+]","LBD4_ARATH^LBD4_ARATH^Q:1-117,H:1-116^91.45%ID^E:1e-64^RecName: Full=LOB domain-containing protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03195.11^DUF260^Protein of unknown function DUF260^14-111^E:4.8e-46",".",".","ENOG410YHFG^lob domain-containing protein","KEGG:ath:AT1G31320",".",".",".","."]
["TRINITY_DN43817_c6_g7","roots S.abrotanoides","roots S. yangii",3.11674663814856,"0.000126895341494289","0.000294263651480781","TRINITY_DN43817_c6_g7_i1","ZHD11_ARATH^ZHD11_ARATH^Q:250-813,H:29-223^48.21%ID^E:6e-54^RecName: Full=Zinc-finger homeodomain protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43817_c6_g7_i1.p1","1-906[+]","ZHD11_ARATH^ZHD11_ARATH^Q:84-271,H:29-223^48.21%ID^E:2e-54^RecName: Full=Zinc-finger homeodomain protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04770.9^ZF-HD_dimer^ZF-HD protein dimerisation region^85-138^E:2.1e-25","sigP:1^22^0.528^YES",".","ENOG410YKTX^homeobox protein","KEGG:ath:AT1G69600","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45481_c0_g1","roots S.abrotanoides","roots S. yangii",3.06181873827315,"0.000297663138029978","0.000658772731857079","TRINITY_DN45481_c0_g1_i1","NAC98_ARATH^NAC98_ARATH^Q:289-1230,H:13-374^47.04%ID^E:4e-95^RecName: Full=Protein CUP-SHAPED COTYLEDON 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45481_c0_g1_i1.p1","259-1233[+]","NAC98_ARATH^NAC98_ARATH^Q:11-324,H:13-374^48.68%ID^E:2e-102^RecName: Full=Protein CUP-SHAPED COTYLEDON 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^16-142^E:4.1e-28",".",".","ENOG410Y9VP^Protein CUP-SHAPED COTYLEDON","KEGG:ath:AT5G53950","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010160^biological_process^formation of organ boundary`GO:0048366^biological_process^leaf development`GO:0010072^biological_process^primary shoot apical meristem specification`GO:0048504^biological_process^regulation of timing of organ formation`GO:0010223^biological_process^secondary shoot formation`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47690_c1_g4","roots S.abrotanoides","roots S. yangii",3.02076143054181,{"v":5027626444.22231,"d":"5.03E+09"},"0.000122719411617031","TRINITY_DN47690_c1_g4_i2","DRL4_ARATH^DRL4_ARATH^Q:209-1045,H:2-295^34.56%ID^E:1e-39^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47690_c1_g4_i2.p1","203-1051[+]","DRL4_ARATH^DRL4_ARATH^Q:3-281,H:2-295^37.12%ID^E:1e-46^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^174-279^E:8.3e-22",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G50180","GO:0009506^cellular_component^plasmodesma`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45664_c0_g3","roots S.abrotanoides","roots S. yangii",3.00752623495702,{"v":5844004313.41941,"d":"5.84E+09"},"0.000141435534448897","TRINITY_DN45664_c0_g3_i2","Y5270_ARATH^Y5270_ARATH^Q:313-981,H:2-203^48.44%ID^E:2e-59^RecName: Full=B3 domain-containing protein At5g42700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45664_c0_g3_i2.p1","313-1029[+]","Y5270_ARATH^Y5270_ARATH^Q:1-223,H:2-203^50.89%ID^E:3e-67^RecName: Full=B3 domain-containing protein At5g42700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02362.18^B3^B3 DNA binding domain^129-213^E:7e-13",".",".","ENOG4111SA1^B3 domain-containing protein","KEGG:ath:AT5G42700","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN41221_c0_g2","roots S.abrotanoides","roots S. yangii",2.97651101076965,"0.000412544448979589","0.0008959894635786","TRINITY_DN41221_c0_g2_i1","CCA31_ARATH^CCA31_ARATH^Q:1366-278,H:1-346^57.81%ID^E:8e-146^RecName: Full=Putative cyclin-A3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41221_c0_g2_i1.p1","245-1366[-]","CCA32_ARATH^CCA32_ARATH^Q:1-366,H:1-366^56.72%ID^E:2e-151^RecName: Full=Cyclin-A3-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^105-233^E:1.4e-41`PF02984.16^Cyclin_C^Cyclin, C-terminal domain^236-358^E:7.1e-33",".",".","COG5024^g2 mitotic-specific","KEGG:ath:AT1G47210`KO:K06627","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division","GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN44883_c1_g1","roots S.abrotanoides","roots S. yangii",2.93917522722229,{"v":5822099321.76009,"d":"5.82E+09"},"0.000140929807804989","TRINITY_DN44883_c1_g1_i12","RL403_CHLRE^RL403_CHLRE^Q:377-51,H:20-128^92.66%ID^E:1e-68^RecName: Full=Ubiquitin-60S ribosomal protein L40;^Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas",".","TRINITY_DN44883_c1_g1_i12.p1","48-377[-]","RL403_CHLRE^RL403_CHLRE^Q:1-109,H:20-128^92.66%ID^E:5e-69^RecName: Full=Ubiquitin-60S ribosomal protein L40;^Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas","PF00240.20^ubiquitin^Ubiquitin family^1-55^E:1e-25`PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^2-52^E:1.4e-10`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^2-50^E:0.00051`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^20-53^E:0.06`PF01020.14^Ribosomal_L40e^Ribosomal L40e family^59-108^E:8.2e-31",".",".","COG1552^Ribosomal protein","KEGG:cre:CHLREDRAFT_195594`KO:K02927","GO:0005634^cellular_component^nucleus`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0005515^molecular_function^protein binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN91030_c0_g1","roots S.abrotanoides","roots S. yangii",2.88853581378329,"0.000105559006940142","0.000247144646632688","TRINITY_DN91030_c0_g1_i1","CRPM2_ARATH^CRPM2_ARATH^Q:648-43,H:1-203^70.44%ID^E:4e-88^RecName: Full=Cold-regulated 413 plasma membrane protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN91030_c0_g1_i1.p1","40-732[-]","CRPM2_ARATH^CRPM2_ARATH^Q:29-230,H:1-203^73.4%ID^E:2e-105^RecName: Full=Cold-regulated 413 plasma membrane protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05562.8^WCOR413^Cold acclimation protein WCOR413^37-217^E:1.8e-88",".",".","ENOG4111SCF^Cold acclimation protein","KEGG:ath:AT3G50830","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane","GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN37248_c0_g1","roots S.abrotanoides","roots S. yangii",2.78214010739677,"0.000109132979152651","0.000255063535801273","TRINITY_DN37248_c0_g1_i3","WEE1_ARATH^WEE1_ARATH^Q:174-998,H:7-290^44.1%ID^E:2e-66^RecName: Full=Wee1-like protein kinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37248_c0_g1_i3.p1","183-1043[+]","WEE1_ARATH^WEE1_ARATH^Q:25-272,H:30-290^48.09%ID^E:9e-71^RecName: Full=Wee1-like protein kinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XS1M^Protein kinase, membrane associated tyrosine threonine 1","KEGG:ath:AT1G02970`KO:K06632","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0004715^molecular_function^non-membrane spanning protein tyrosine kinase activity`GO:0004672^molecular_function^protein kinase activity`GO:0007050^biological_process^cell cycle arrest`GO:0051301^biological_process^cell division`GO:0000076^biological_process^DNA replication checkpoint`GO:0007067^biological_process^mitotic nuclear division",".",".","."]
["TRINITY_DN46509_c4_g1","roots S.abrotanoides","roots S. yangii",2.76204617189532,{"v":6370103769.91574,"d":"6.37E+09"},"0.000153384237707011","TRINITY_DN46509_c4_g1_i1","Y5614_ARATH^Y5614_ARATH^Q:1399-1761,H:603-720^37.1%ID^E:1e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56140;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46509_c4_g1_i1.p2","1435-1761[+]","Y5614_ARATH^Y5614_ARATH^Q:19-109,H:634-720^41.94%ID^E:3e-09^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56140;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XSG4^(E 0.0) leucine-rich repeat family protein protein kinase family protein","KEGG:ath:AT1G56140","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity",".",".","."]
["TRINITY_DN43187_c1_g5","roots S.abrotanoides","roots S. yangii",2.66360365891096,"0.00320991611893285","0.00609212513782792","TRINITY_DN43187_c1_g5_i1","RS15_ORYSJ^RS15_ORYSJ^Q:27-473,H:7-154^66.44%ID^E:8e-50^RecName: Full=40S ribosomal protein S15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43187_c1_g5_i1.p1","3-476[+]","RS15_ORYSJ^RS15_ORYSJ^Q:9-157,H:7-154^75.17%ID^E:6e-76^RecName: Full=40S ribosomal protein S15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00203.18^Ribosomal_S19^Ribosomal protein S19^59-140^E:2.5e-32",".",".","COG0185^Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity)",".","GO:0022627^cellular_component^cytosolic small ribosomal subunit`GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN28768_c0_g1","roots S.abrotanoides","roots S. yangii",2.65329074048578,"0.000133790935622943","0.000309278773247344","TRINITY_DN28768_c0_g1_i1","MAKR6_ARATH^MAKR6_ARATH^Q:1188-538,H:7-235^28.91%ID^E:1e-07^RecName: Full=Probable membrane-associated kinase regulator 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28768_c0_g1_i1.p1","535-1191[-]","MAKR6_ARATH^MAKR6_ARATH^Q:2-218,H:7-235^28.91%ID^E:6e-09^RecName: Full=Probable membrane-associated kinase regulator 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG41114QY^membrane-associated kinase regulator","KEGG:ath:AT5G52900","GO:0005886^cellular_component^plasma membrane`GO:0009738^biological_process^abscisic acid-activated signaling pathway",".",".","."]
["TRINITY_DN46872_c2_g5","roots S.abrotanoides","roots S. yangii",2.60738479687665,{"v":5584842321.48995,"d":"5.58E+09"},"0.00013563327188592","TRINITY_DN46872_c2_g5_i1","ML146_PAPSO^ML146_PAPSO^Q:52-411,H:14-137^37.3%ID^E:8e-20^RecName: Full=Major latex protein 146;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Ranunculales; Papaveraceae; Papaveroideae; Papaver",".","TRINITY_DN46872_c2_g5_i1.p1","31-477[+]","ML146_PAPSO^ML146_PAPSO^Q:8-127,H:14-137^37.3%ID^E:1e-20^RecName: Full=Major latex protein 146;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Ranunculales; Papaveraceae; Papaveroideae; Papaver","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^6-146^E:3.2e-25",".",".",".",".","GO:0016023^cellular_component^cytoplasmic, membrane-bounded vesicle`GO:0005773^cellular_component^vacuole`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN32735_c0_g2","roots S.abrotanoides","roots S. yangii",2.53166970734488,{"v":6052637054.58481,"d":"6.05E+09"},"0.000146168307642311","TRINITY_DN32735_c0_g2_i1","ERECT_ARATH^ERECT_ARATH^Q:1288-344,H:29-345^34.46%ID^E:5e-35^RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ERECT_ARATH^ERECT_ARATH^Q:1126-344,H:271-536^35.56%ID^E:1e-22^RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ERECT_ARATH^ERECT_ARATH^Q:1123-614,H:392-539^33.53%ID^E:1e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32735_c0_g2_i1.p1","191-1399[-]","ERECT_ARATH^ERECT_ARATH^Q:38-352,H:29-345^34.46%ID^E:4e-39^RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ERECT_ARATH^ERECT_ARATH^Q:92-352,H:271-536^35.56%ID^E:5e-26^RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ERECT_ARATH^ERECT_ARATH^Q:81-239,H:380-540^35.4%ID^E:2e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ERECT_ARATH^ERECT_ARATH^Q:92-262,H:343-539^31.82%ID^E:1e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^33-73^E:1.4e-07`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^84-97^E:5300`PF13516.3^LRR_6^Leucine Rich repeat^152-166^E:0.14`PF00560.30^LRR_1^Leucine Rich Repeat^153-171^E:0.93`PF13855.3^LRR_8^Leucine rich repeat^199-257^E:3.5e-08`PF13855.3^LRR_8^Leucine rich repeat^221-279^E:2.9e-07",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT2G26330","GO:0016021^cellular_component^integral component of membrane`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042277^molecular_function^peptide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0019199^molecular_function^transmembrane receptor protein kinase activity`GO:0070370^biological_process^cellular heat acclimation`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:0048281^biological_process^inflorescence morphogenesis`GO:0009965^biological_process^leaf morphogenesis`GO:0009664^biological_process^plant-type cell wall organization`GO:0009944^biological_process^polarity specification of adaxial/abaxial axis`GO:0030155^biological_process^regulation of cell adhesion`GO:0051302^biological_process^regulation of cell division`GO:0001558^biological_process^regulation of cell growth`GO:2000027^biological_process^regulation of organ morphogenesis`GO:0010103^biological_process^stomatal complex morphogenesis`GO:0010148^biological_process^transpiration`GO:0001944^biological_process^vasculature development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44864_c4_g1","roots S.abrotanoides","roots S. yangii",2.527221294119,"0.000961168616012892","0.00197427128574698","TRINITY_DN44864_c4_g1_i1","ACD6_ARATH^ACD6_ARATH^Q:529-2,H:98-286^32.28%ID^E:3e-11^RecName: Full=Protein ACCELERATED CELL DEATH 6 {ECO:0000303|PubMed:10488236};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44864_c4_g1_i1.p1","2-997[-]","ACD6_ARATH^ACD6_ARATH^Q:157-332,H:98-286^32.28%ID^E:2e-11^RecName: Full=Protein ACCELERATED CELL DEATH 6 {ECO:0000303|PubMed:10488236};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13857.3^Ank_5^Ankyrin repeats (many copies)^155-201^E:1.3e-06`PF13637.3^Ank_4^Ankyrin repeats (many copies)^161-214^E:7.6e-09`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^193-261^E:1.6e-08`PF13606.3^Ank_3^Ankyrin repeat^194-216^E:0.0012`PF00023.27^Ank^Ankyrin repeat^194-217^E:0.0022",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT4G14400","GO:0030176^cellular_component^integral component of endoplasmic reticulum membrane`GO:0005887^cellular_component^integral component of plasma membrane`GO:0016020^cellular_component^membrane`GO:0008219^biological_process^cell death`GO:0071446^biological_process^cellular response to salicylic acid stimulus`GO:0009816^biological_process^defense response to bacterium, incompatible interaction`GO:1900426^biological_process^positive regulation of defense response to bacterium`GO:1902290^biological_process^positive regulation of defense response to oomycetes`GO:0016567^biological_process^protein ubiquitination`GO:1900150^biological_process^regulation of defense response to fungus`GO:2000031^biological_process^regulation of salicylic acid mediated signaling pathway`GO:0009617^biological_process^response to bacterium`GO:0050826^biological_process^response to freezing`GO:0009416^biological_process^response to light stimulus`GO:0009751^biological_process^response to salicylic acid`GO:0009615^biological_process^response to virus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44411_c1_g1","roots S.abrotanoides","roots S. yangii",2.52266494611034,"0.000375082310644289","0.000818955602228028","TRINITY_DN44411_c1_g1_i1","AB11G_ARATH^AB11G_ARATH^Q:2413-347,H:1-696^82.93%ID^E:0^RecName: Full=ABC transporter G family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44411_c1_g1_i1.p1","323-2458[-]","AB11G_ARATH^AB11G_ARATH^Q:16-704,H:1-696^82.93%ID^E:0^RecName: Full=ABC transporter G family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^77-228^E:3.4e-23`PF13555.3^AAA_29^P-loop containing region of AAA domain^87-109^E:2.1e-06`PF01061.21^ABC2_membrane^ABC-2 type transporter^390-596^E:2.3e-31",".",".","COG1131^(ABC) transporter","KEGG:ath:AT1G17840","GO:0009897^cellular_component^external side of plasma membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0015245^molecular_function^fatty acid transporter activity`GO:0042803^molecular_function^protein homodimerization activity`GO:0010588^biological_process^cotyledon vascular tissue pattern formation`GO:0080051^biological_process^cutin transport`GO:0015908^biological_process^fatty acid transport`GO:0009737^biological_process^response to abscisic acid`GO:0009651^biological_process^response to salt stress`GO:0009611^biological_process^response to wounding`GO:0010222^biological_process^stem vascular tissue pattern formation`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47171_c1_g1","roots S.abrotanoides","roots S. yangii",2.51895702424139,"0.000233191625445546","0.000522418794625882","TRINITY_DN47171_c1_g1_i10","PHO19_ARATH^PHO19_ARATH^Q:1287-265,H:449-790^57.31%ID^E:3e-144^RecName: Full=Phosphate transporter PHO1 homolog 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHO19_ARATH^PHO19_ARATH^Q:1813-1379,H:297-441^54.48%ID^E:3e-144^RecName: Full=Phosphate transporter PHO1 homolog 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHO19_ARATH^PHO19_ARATH^Q:2263-1850,H:1-190^29.69%ID^E:1e-08^RecName: Full=Phosphate transporter PHO1 homolog 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47171_c1_g1_i10.p2","1196-2332[-]","PHO19_ARATH^PHO19_ARATH^Q:174-338,H:297-464^49.4%ID^E:3e-47^RecName: Full=Phosphate transporter PHO1 homolog 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHO19_ARATH^PHO19_ARATH^Q:24-161,H:1-190^28.65%ID^E:6e-16^RecName: Full=Phosphate transporter PHO1 homolog 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03105.16^SPX^SPX domain^24-94^E:9e-13`PF03105.16^SPX^SPX domain^72-160^E:5.7e-10`PF03105.16^SPX^SPX domain^173-224^E:9.6e-17",".",".","COG5409^Xenotropic and polytropic retrovirus receptor 1","KEGG:ath:AT3G29060","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0006817^biological_process^phosphate ion transport",".",".","."]
["TRINITY_DN89038_c0_g1","roots S.abrotanoides","roots S. yangii",2.48353666041874,"0.000261272869833799","0.00058234087875129","TRINITY_DN89038_c0_g1_i1","DTX54_ARATH^DTX54_ARATH^Q:9-731,H:261-500^75.1%ID^E:9e-114^RecName: Full=Protein DETOXIFICATION 54 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN89038_c0_g1_i1.p1","3-767[+]","DTX54_ARATH^DTX54_ARATH^Q:3-254,H:261-510^73.81%ID^E:2e-131^RecName: Full=Protein DETOXIFICATION 54 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^14-175^E:2.7e-33",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G71870`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0006855^biological_process^drug transmembrane transport","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44282_c1_g1","roots S.abrotanoides","roots S. yangii",2.47946348652103,{"v":5240701779.19479,"d":"5.24E+09"},"0.000127686125228882","TRINITY_DN44282_c1_g1_i1","IMK3_ARATH^IMK3_ARATH^Q:2362-266,H:46-770^66.58%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase IMK3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44282_c1_g1_i1.p1","233-2503[-]","IMK3_ARATH^IMK3_ARATH^Q:31-746,H:29-770^65.37%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase IMK3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^46-56^E:3000`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^61-100^E:9e-08`PF13855.3^LRR_8^Leucine rich repeat^249-307^E:1.2e-10`PF00560.30^LRR_1^Leucine Rich Repeat^273-293^E:1.2`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^470-732^E:1.1e-40`PF00069.22^Pkinase^Protein kinase domain^470-731^E:3.9e-38",".",".",".","KEGG:ath:AT3G56100","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44007_c0_g4","roots S.abrotanoides","roots S. yangii",2.46876558670686,{"v":9389446936.17468,"d":"9.39E+09"},"0.00022129948278672","TRINITY_DN44007_c0_g4_i1","QKY_ARATH^QKY_ARATH^Q:866-3154,H:303-1081^49.37%ID^E:0^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`QKY_ARATH^QKY_ARATH^Q:176-547,H:18-145^46.09%ID^E:5e-24^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44007_c0_g4_i1.p1","164-3157[+]","QKY_ARATH^QKY_ARATH^Q:235-997,H:303-1081^49.62%ID^E:0^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`QKY_ARATH^QKY_ARATH^Q:5-128,H:18-145^46.09%ID^E:4e-24^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^5-96^E:2e-16`PF00168.27^C2^C2 domain^265-356^E:8.6e-22`PF00168.27^C2^C2 domain^426-532^E:1.5e-13`PF00168.27^C2^C2 domain^589-697^E:2.1e-21`PF08372.7^PRT_C^Plant phosphoribosyltransferase C-terminal^842-997^E:1.9e-74",".",".","ENOG410Y912^Plant phosphoribosyltransferase C-terminal","KEGG:ath:AT1G74720","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005509^molecular_function^calcium ion binding`GO:0005544^molecular_function^calcium-dependent phospholipid binding`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0048513^biological_process^animal organ development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46545_c1_g6","roots S.abrotanoides","roots S. yangii",2.43375072600153,{"v":4716218082.43091,"d":"4.72E+09"},"0.000115674025141505","TRINITY_DN46545_c1_g6_i2","CDC6B_ARATH^CDC6B_ARATH^Q:1883-471,H:35-504^59.16%ID^E:0^RecName: Full=Cell division control protein 6 homolog B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46545_c1_g6_i2.p1","465-1955[-]","CDC6B_ARATH^CDC6B_ARATH^Q:25-495,H:35-504^59.16%ID^E:0^RecName: Full=Cell division control protein 6 homolog B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13401.3^AAA_22^AAA domain^137-255^E:5.3e-16`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^143-279^E:0.00018`PF09079.8^Cdc6_C^CDC6, C terminal winged helix domain^406-484^E:4.4e-19",".",".","COG1474^Involved in regulation of DNA replication (By similarity)","KEGG:ath:AT1G07270`KO:K02213","GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0006270^biological_process^DNA replication initiation","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN71605_c0_g1","roots S.abrotanoides","roots S. yangii",2.39033929390494,"0.000216869506584125","0.000487337211152246","TRINITY_DN71605_c0_g1_i1","NLTP6_AMBAR^NLTP6_AMBAR^Q:5-325,H:5-115^44.14%ID^E:4e-22^RecName: Full=Non-specific lipid-transfer protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Ambrosia",".","TRINITY_DN71605_c0_g1_i1.p1","2-331[+]","NLTP6_AMBAR^NLTP6_AMBAR^Q:2-108,H:5-115^44.14%ID^E:1e-22^RecName: Full=Non-specific lipid-transfer protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Ambrosia","PF14368.3^LTP_2^Probable lipid transfer^15-94^E:5.5e-05`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^23-97^E:4.6e-07","sigP:1^19^0.897^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN46590_c3_g1","roots S.abrotanoides","roots S. yangii",2.35143896572697,"0.00278118117114672","0.0053334923200419","TRINITY_DN46590_c3_g1_i4","SAHH_WHEAT^SAHH_WHEAT^Q:48-959,H:2-303^72.04%ID^E:3e-151^RecName: Full=Adenosylhomocysteinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".","TRINITY_DN46590_c3_g1_i4.p1","3-962[+]","SAHH_PETCR^SAHH_PETCR^Q:16-319,H:2-303^71.48%ID^E:5e-155^RecName: Full=Adenosylhomocysteinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; apioid superclade; Apieae; Petroselinum","PF05221.14^AdoHcyase^S-adenosyl-L-homocysteine hydrolase^27-264^E:3.9e-107`PF00670.18^AdoHcyase_NAD^S-adenosyl-L-homocysteine hydrolase, NAD binding domain^256-319^E:3.8e-34",".",".",".",".","GO:0004013^molecular_function^adenosylhomocysteinase activity`GO:0006730^biological_process^one-carbon metabolic process","GO:0004013^molecular_function^adenosylhomocysteinase activity`GO:0006730^biological_process^one-carbon metabolic process",".","."]
["TRINITY_DN47562_c0_g3","roots S.abrotanoides","roots S. yangii",2.34394387798893,"0.000274531131981804","0.000610333733187746","TRINITY_DN47562_c0_g3_i1","SD11_ARATH^SD11_ARATH^Q:2-463,H:281-434^39.1%ID^E:4e-32^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47562_c0_g3_i1.p1","2-637[+]","SD11_ARATH^SD11_ARATH^Q:1-154,H:281-434^39.1%ID^E:4e-32^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00954.17^S_locus_glycop^S-locus glycoprotein domain^1-43^E:3.5e-11`PF08276.8^PAN_2^PAN-like domain^65-131^E:4.4e-19",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen",".","."]
["TRINITY_DN46177_c0_g2","roots S.abrotanoides","roots S. yangii",2.34145123257298,"0.000495060597446387","0.00106289289636157","TRINITY_DN46177_c0_g2_i1","BH093_ARATH^BH093_ARATH^Q:965-357,H:143-351^64.93%ID^E:1e-75^RecName: Full=Transcription factor bHLH93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46177_c0_g2_i1.p1","354-1232[-]","BH093_ARATH^BH093_ARATH^Q:90-292,H:143-351^64.93%ID^E:4e-78^RecName: Full=Transcription factor bHLH93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^126-169^E:1.8e-09",".",".","ENOG410YB4F^Transcription factor","KEGG:ath:AT5G65640","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0007275^biological_process^multicellular organism development`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN47764_c6_g1","roots S.abrotanoides","roots S. yangii",2.31151438786466,"0.00316438548082033","0.00601224634296212","TRINITY_DN47764_c6_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:310-2,H:688-786^47.57%ID^E:2e-20^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47764_c6_g1_i1.p1","2-310[-]","R1A6_SOLDE^R1A6_SOLDE^Q:1-103,H:688-786^47.57%ID^E:1e-20^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-102^E:7e-24",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN39155_c1_g1","roots S.abrotanoides","roots S. yangii",2.29745416988299,"0.00579205559340367","0.0104990525512804","TRINITY_DN39155_c1_g1_i1","RS8_MAIZE^RS8_MAIZE^Q:347-6,H:1-115^70.43%ID^E:7e-51^RecName: Full=40S ribosomal protein S8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN39155_c1_g1_i1.p1","3-365[-]","RS8_MAIZE^RS8_MAIZE^Q:7-120,H:1-115^70.43%ID^E:6e-51^RecName: Full=40S ribosomal protein S8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF01201.19^Ribosomal_S8e^Ribosomal protein S8e^7-116^E:1.2e-42",".",".","COG2007^40S ribosomal protein S8","KEGG:zma:103654826`KEGG:zma:103654828`KEGG:zma:542341`KO:K02995","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN44097_c3_g2","roots S.abrotanoides","roots S. yangii",2.29542083771057,{"v":6738404851.55843,"d":"6.74E+09"},"0.000161750661475425","TRINITY_DN44097_c3_g2_i9","SAG39_ORYSJ^SAG39_ORYSJ^Q:4-582,H:147-337^53.61%ID^E:1e-63^RecName: Full=Senescence-specific cysteine protease SAG39 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44097_c3_g2_i9.p1","1-651[+]","SAG39_ORYSJ^SAG39_ORYSJ^Q:2-194,H:147-337^53.61%ID^E:4e-65^RecName: Full=Senescence-specific cysteine protease SAG39 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00112.20^Peptidase_C1^Papain family cysteine protease^1-194^E:6.5e-64",".",".",".",".","GO:0005615^cellular_component^extracellular space`GO:0005764^cellular_component^lysosome`GO:0010282^cellular_component^senescence-associated vacuole`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0007568^biological_process^aging`GO:0010623^biological_process^developmental programmed cell death`GO:0010150^biological_process^leaf senescence`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process`GO:0009737^biological_process^response to abscisic acid`GO:0009723^biological_process^response to ethylene`GO:0009739^biological_process^response to gibberellin","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN39716_c0_g1","roots S.abrotanoides","roots S. yangii",2.27703944190397,"0.000467428012756511","0.00100728105078125","TRINITY_DN39716_c0_g1_i6","ATK4_ARATH^ATK4_ARATH^Q:2890-2078,H:328-601^54.91%ID^E:5e-131^RecName: Full=Kinesin-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ATK4_ARATH^ATK4_ARATH^Q:2015-1587,H:599-742^69.44%ID^E:5e-131^RecName: Full=Kinesin-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39716_c0_g1_i6.p1","1976-3241[-]","KP1_ARATH^KP1_ARATH^Q:111-392,H:304-589^49.3%ID^E:1e-86^RecName: Full=Kinesin KP1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14295.3^PAN_4^PAN domain^94-117^E:0.002`PF16796.2^Microtub_bd^Microtubule binding^166-326^E:4.8e-45`PF00225.20^Kinesin^Kinesin motor domain^220-391^E:3.3e-49",".",".","COG5059^Kinesin family member","KEGG:ath:AT3G44730`KO:K10406","GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0003777^molecular_function^microtubule motor activity`GO:0009060^biological_process^aerobic respiration`GO:0007018^biological_process^microtubule-based movement`GO:0009845^biological_process^seed germination","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN46356_c1_g3","roots S.abrotanoides","roots S. yangii",2.26432728122947,0,0,"TRINITY_DN46356_c1_g3_i3","EXPA4_ARATH^EXPA4_ARATH^Q:1151-432,H:18-257^86.67%ID^E:1e-153^RecName: Full=Expansin-A4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46356_c1_g3_i3.p1","429-1211[-]","EXPA4_ARATH^EXPA4_ARATH^Q:16-260,H:13-257^85.71%ID^E:3e-158^RecName: Full=Expansin-A4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03330.15^DPBB_1^Lytic transglycolase^69-156^E:1.5e-21`PF01357.18^Pollen_allerg_1^Pollen allergen^167-244^E:8.3e-27","sigP:1^23^0.829^YES",".","ENOG410YEM2^expansin","KEGG:ath:AT2G39700","GO:0005829^cellular_component^cytosol`GO:0005576^cellular_component^extracellular region`GO:0016020^cellular_component^membrane`GO:0009505^cellular_component^plant-type cell wall`GO:0009506^cellular_component^plasmodesma`GO:0009664^biological_process^plant-type cell wall organization`GO:0006949^biological_process^syncytium formation",".",".","."]
["TRINITY_DN43818_c1_g1","roots S.abrotanoides","roots S. yangii",2.23449813943784,"0.000123472491854519","0.000286826146899493","TRINITY_DN43818_c1_g1_i1","Y232_RICCO^Y232_RICCO^Q:1448-282,H:175-575^41.44%ID^E:5e-91^RecName: Full=UPF0392 protein RCOM_0530710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN43818_c1_g1_i1.p1","279-1916[-]","Y8219_ORYSJ^Y8219_ORYSJ^Q:112-531,H:126-574^39.34%ID^E:7e-94^RecName: Full=UPF0392 protein Os08g0121900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF01697.24^Glyco_transf_92^Glycosyltransferase family 92^266-480^E:2e-28`PF13704.3^Glyco_tranf_2_4^Glycosyl transferase family 2^278-366^E:1.6e-11",".",".","COG0463^Glycosyl transferase, family 2","KEGG:osa:4344548","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN46606_c0_g6","roots S.abrotanoides","roots S. yangii",2.22928774337539,{"v":7573871212.44769,"d":"7.57E+09"},"0.000180780399407997","TRINITY_DN46606_c0_g6_i1","SBT14_ARATH^SBT14_ARATH^Q:563-6,H:109-314^50.72%ID^E:9e-57^RecName: Full=Subtilisin-like protease SBT1.4 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46606_c0_g6_i1.p1","3-569[-]","SBT14_ARATH^SBT14_ARATH^Q:3-188,H:109-314^50.72%ID^E:8e-57^RecName: Full=Subtilisin-like protease SBT1.4 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00082.19^Peptidase_S8^Subtilase family^27-175^E:5.7e-21",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT3G14067","GO:0048046^cellular_component^apoplast`GO:0009505^cellular_component^plant-type cell wall`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0010260^biological_process^organ senescence`GO:0010223^biological_process^secondary shoot formation","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46437_c1_g1","roots S.abrotanoides","roots S. yangii",2.21452518247225,"0.000369954009928216","0.000808263741606402","TRINITY_DN46437_c1_g1_i1","AB9B_ARATH^AB9B_ARATH^Q:4010-252,H:5-1236^68.26%ID^E:0^RecName: Full=ABC transporter B family member 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46437_c1_g1_i1.p1","249-4040[-]","AB9B_ARATH^AB9B_ARATH^Q:9-1263,H:4-1236^68.31%ID^E:0^RecName: Full=ABC transporter B family member 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00664.20^ABC_membrane^ABC transporter transmembrane region^37-307^E:8.2e-61`PF00005.24^ABC_tran^ABC transporter^377-524^E:4.8e-33`PF09818.6^ABC_ATPase^Predicted ATPase of the ABC class^464-525^E:0.00014`PF00664.20^ABC_membrane^ABC transporter transmembrane region^699-969^E:1.1e-60`PF00005.24^ABC_tran^ABC transporter^1040-1188^E:1.1e-32",".",".","COG1132^(ABC) transporter","KEGG:ath:AT4G18050`KO:K05658","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN47209_c2_g1","roots S.abrotanoides","roots S. yangii",2.20634172065977,"0.00113035903550078","0.0022991455056364","TRINITY_DN47209_c2_g1_i3","HSP83_IPONI^HSP83_IPONI^Q:968-3,H:3-340^71.89%ID^E:8e-159^RecName: Full=Heat shock protein 83;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN47209_c2_g1_i3.p1","3-962[-]","HSP83_IPONI^HSP83_IPONI^Q:3-320,H:7-340^72.46%ID^E:7e-166^RecName: Full=Heat shock protein 83;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF13589.3^HATPase_c_3^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^26-147^E:7e-12`PF02518.23^HATPase_c^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^28-182^E:2.6e-17`PF00183.15^HSP90^Hsp90 protein^185-320^E:8.3e-49",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN47089_c1_g6","roots S.abrotanoides","roots S. yangii",2.20412128370985,"0.000694223878361606","0.00145899280822126","TRINITY_DN47089_c1_g6_i1","R1B14_SOLDE^R1B14_SOLDE^Q:4-1380,H:782-1239^26.46%ID^E:2e-25^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47089_c1_g6_i1.p1","1-1440[+]","R1B14_SOLDE^R1B14_SOLDE^Q:2-460,H:782-1239^27.56%ID^E:2e-31^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^2-41^E:1e-06",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN122393_c0_g1","roots S.abrotanoides","roots S. yangii",2.1931798044391,"0.00439004415006223","0.00813949725261373","TRINITY_DN122393_c0_g1_i1","DIRL1_ARATH^DIRL1_ARATH^Q:393-181,H:23-95^39.73%ID^E:4e-12^RecName: Full=Putative lipid-transfer protein DIR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN122393_c0_g1_i1.p1","145-588[-]","DIRL1_ARATH^DIRL1_ARATH^Q:72-136,H:29-95^41.79%ID^E:1e-12^RecName: Full=Putative lipid-transfer protein DIR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14368.3^LTP_2^Probable lipid transfer^52-143^E:1.1e-10`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^73-143^E:9.7e-05",".",".","ENOG410YXDY^Lipid-transfer protein","KEGG:ath:AT5G48485","GO:0048046^cellular_component^apoplast`GO:0005783^cellular_component^endoplasmic reticulum`GO:0009506^cellular_component^plasmodesma`GO:0005504^molecular_function^fatty acid binding`GO:0043621^molecular_function^protein self-association`GO:0008270^molecular_function^zinc ion binding`GO:0006869^biological_process^lipid transport`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway",".",".","."]
["TRINITY_DN44441_c4_g1","roots S.abrotanoides","roots S. yangii",2.18372683324831,{"v":4737383703.49231,"d":"4.74E+09"},"0.000116121798455372","TRINITY_DN44441_c4_g1_i1","HSP11_MEDSA^HSP11_MEDSA^Q:313-657,H:32-143^68.1%ID^E:7e-25^RecName: Full=18.1 kDa class I heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN44441_c4_g1_i1.p1","274-663[+]","HSP12_MEDSA^HSP12_MEDSA^Q:14-126,H:47-156^70.18%ID^E:1e-44^RecName: Full=18.2 kDa class I heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF00011.18^HSP20^Hsp20/alpha crystallin family^24-126^E:1.9e-28",".",".",".",".","GO:0005737^cellular_component^cytoplasm",".",".","."]
["TRINITY_DN45198_c5_g3","roots S.abrotanoides","roots S. yangii",2.18023466879388,0,0,"TRINITY_DN45198_c5_g3_i2","PRU1_PRUAR^PRU1_PRUAR^Q:1163-1621,H:1-152^44.44%ID^E:1e-33^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN45198_c5_g3_i2.p1","1022-1648[+]","PRU1_PRUAR^PRU1_PRUAR^Q:48-208,H:1-160^45.34%ID^E:5e-41^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^61-185^E:5.1e-23",".",".",".",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN47187_c6_g2","roots S.abrotanoides","roots S. yangii",2.16212859933647,"0.0171693530253952","0.0284435487301415","TRINITY_DN47187_c6_g2_i1","HSP82_TOBAC^HSP82_TOBAC^Q:5-1183,H:1-394^75.13%ID^E:1e-176^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47187_c6_g2_i1.p1","2-1192[+]","HSP82_TOBAC^HSP82_TOBAC^Q:2-394,H:1-394^76.14%ID^E:0^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00183.15^HSP90^Hsp90 protein^1-397^E:1.6e-197",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN47442_c0_g1","roots S.abrotanoides","roots S. yangii",2.1614525882042,"0.000671441349647604","0.00141462394439027","TRINITY_DN47442_c0_g1_i3","NIP1_NICAL^NIP1_NICAL^Q:211-1011,H:1-267^72.39%ID^E:8e-132^RecName: Full=Probable aquaporin NIP-type;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47442_c0_g1_i3.p1","211-1050[+]","NIP1_NICAL^NIP1_NICAL^Q:1-267,H:1-267^72.39%ID^E:8e-135^RecName: Full=Probable aquaporin NIP-type;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00230.17^MIP^Major intrinsic protein^38-248^E:2e-56",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN40960_c0_g1","roots S.abrotanoides","roots S. yangii",2.15951924921483,{"v":5819106848.30031,"d":"5.82E+09"},"0.000140881781863235","TRINITY_DN40960_c0_g1_i4","GUX7_ARATH^GUX7_ARATH^Q:1691-354,H:48-494^69.57%ID^E:0^RecName: Full=Putative glucuronosyltransferase PGSIP7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40960_c0_g1_i4.p1","351-1736[-]","GUX7_ARATH^GUX7_ARATH^Q:16-461,H:48-494^69.57%ID^E:0^RecName: Full=Putative glucuronosyltransferase PGSIP7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^20^0.882^YES",".","COG5597^Glycosyl Transferase","KEGG:ath:AT4G16600","GO:0016021^cellular_component^integral component of membrane`GO:0046872^molecular_function^metal ion binding`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".",".","."]
["TRINITY_DN45637_c1_g4","roots S.abrotanoides","roots S. yangii",2.15925000933317,{"v":6754999433.37505,"d":"6.75E+09"},"0.000162121146854434","TRINITY_DN45637_c1_g4_i2","FDL48_ARATH^FDL48_ARATH^Q:119-1039,H:14-331^28.35%ID^E:2e-18^RecName: Full=Putative F-box/FBD/LRR-repeat protein At4g13965;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45637_c1_g4_i2.p1","116-895[+]","FBL42_ARATH^FBL42_ARATH^Q:2-207,H:37-255^31.74%ID^E:6e-20^RecName: Full=F-box/LRR-repeat protein At3g03360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^3-40^E:0.011",".",".","ENOG410ZQIV^F-box protein","KEGG:ath:AT3G03360",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44679_c4_g2","roots S.abrotanoides","roots S. yangii",2.15118598443573,"0.000145293834281874","0.000334348132405686","TRINITY_DN44679_c4_g2_i1","NUDT1_ARATH^NUDT1_ARATH^Q:554-147,H:6-141^66.91%ID^E:5e-63^RecName: Full=Nudix hydrolase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44679_c4_g2_i1.p1","132-686[-]","NUDT1_ARATH^NUDT1_ARATH^Q:45-180,H:6-141^66.91%ID^E:1e-63^RecName: Full=Nudix hydrolase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00293.25^NUDIX^NUDIX domain^48-162^E:2e-19",".",".","COG1051^NUDiX hydrolase","KEGG:ath:AT1G68760`KO:K03574","GO:0005829^cellular_component^cytosol`GO:0035539^molecular_function^8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity`GO:0008413^molecular_function^8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity`GO:0019177^molecular_function^dihydroneopterin triphosphate pyrophosphohydrolase activity`GO:0046872^molecular_function^metal ion binding`GO:0000210^molecular_function^NAD+ diphosphatase activity`GO:0006974^biological_process^cellular response to DNA damage stimulus`GO:0006203^biological_process^dGTP catabolic process","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN43724_c1_g1","roots S.abrotanoides","roots S. yangii",2.14670087425121,"0.00186236870799285","0.00366686238249794","TRINITY_DN43724_c1_g1_i9","PMA2_SOLLC^PMA2_SOLLC^Q:9-1205,H:199-601^55.42%ID^E:7e-148^RecName: Full=Plasma membrane ATPase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN43724_c1_g1_i9.p1","171-1463[+]","PMA2_SOLLC^PMA2_SOLLC^Q:1-345,H:253-601^56.82%ID^E:5e-138^RecName: Full=Plasma membrane ATPase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00702.23^Hydrolase^haloacid dehalogenase-like hydrolase^2-99^E:2.7e-10",".",".","COG0474^P-type atpase",".","GO:0005887^cellular_component^integral component of plasma membrane`GO:0043231^cellular_component^intracellular membrane-bounded organelle`GO:0005524^molecular_function^ATP binding`GO:0008553^molecular_function^hydrogen-exporting ATPase activity, phosphorylative mechanism`GO:0046872^molecular_function^metal ion binding`GO:0006754^biological_process^ATP biosynthetic process`GO:1902600^biological_process^hydrogen ion transmembrane transport`GO:0051453^biological_process^regulation of intracellular pH",".",".","."]
["TRINITY_DN47329_c0_g4","roots S.abrotanoides","roots S. yangii",2.13667726868163,"0.00168216757840845","0.00333343576654685","TRINITY_DN47329_c0_g4_i2","LHTL7_ARATH^LHTL7_ARATH^Q:188-1513,H:38-475^46.65%ID^E:2e-127^RecName: Full=Lysine histidine transporter-like 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47329_c0_g4_i2.p1","41-1525[+]","LHTL7_ARATH^LHTL7_ARATH^Q:50-494,H:38-478^46.56%ID^E:1e-135^RecName: Full=Lysine histidine transporter-like 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01490.15^Aa_trans^Transmembrane amino acid transporter protein^74-463^E:2.5e-50",".",".","COG0814^amino acid transport","KEGG:ath:AT4G35180","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015171^molecular_function^amino acid transmembrane transporter activity`GO:0003333^biological_process^amino acid transmembrane transport",".",".","."]
["TRINITY_DN45018_c0_g1","roots S.abrotanoides","roots S. yangii",2.12137962416848,"0.000917782024556886","0.00189252749432797","TRINITY_DN45018_c0_g1_i1","WEB1_ARATH^WEB1_ARATH^Q:2-1114,H:282-655^62.77%ID^E:6e-83^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45018_c0_g1_i1.p1","2-1114[+]","WEB1_ARATH^WEB1_ARATH^Q:1-371,H:282-655^62.77%ID^E:1e-137^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05701.8^WEMBL^Weak chloroplast movement under blue light^1-371^E:1.6e-131",".",".","ENOG410YG1U^Pfam:DUF827","KEGG:ath:AT2G26570","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0009904^biological_process^chloroplast accumulation movement`GO:0009903^biological_process^chloroplast avoidance movement",".",".","."]
["TRINITY_DN35271_c0_g1","roots S.abrotanoides","roots S. yangii",2.07460225590652,"0.000312160436845233","0.000688729845695882","TRINITY_DN35271_c0_g1_i3","CMT1_MAIZE^CMT1_MAIZE^Q:138-2330,H:168-886^55%ID^E:0^RecName: Full=DNA (cytosine-5)-methyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN35271_c0_g1_i3.p1","507-2375[+]","CMT1_MAIZE^CMT1_MAIZE^Q:2-608,H:298-886^59.18%ID^E:0^RecName: Full=DNA (cytosine-5)-methyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF00385.21^Chromo^Chromo (CHRromatin Organisation MOdifier) domain^163-217^E:1.9e-11`PF00145.14^DNA_methylase^C-5 cytosine-specific DNA methylase^228-585^E:1.1e-31",".",".","COG0270^Cytosine-specific methyltransferase","KEGG:zma:541827`KO:K00558","GO:0005634^cellular_component^nucleus`GO:0003682^molecular_function^chromatin binding`GO:0003886^molecular_function^DNA (cytosine-5-)-methyltransferase activity`GO:0003677^molecular_function^DNA binding`GO:0016568^biological_process^chromatin modification`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN28061_c0_g1","roots S.abrotanoides","roots S. yangii",2.07413457892542,"0.000262404521423307","0.000584676613483942","TRINITY_DN28061_c0_g1_i2","SEOC_ARATH^SEOC_ARATH^Q:839-2122,H:247-664^33.64%ID^E:1e-63^RecName: Full=Protein SIEVE ELEMENT OCCLUSION C {ECO:0000303|PubMed:20932300};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SEOC_ARATH^SEOC_ARATH^Q:49-678,H:12-221^29.38%ID^E:5e-19^RecName: Full=Protein SIEVE ELEMENT OCCLUSION C {ECO:0000303|PubMed:20932300};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28061_c0_g1_i2.p1","713-2134[+]","SEOC_ARATH^SEOC_ARATH^Q:11-470,H:220-664^33.54%ID^E:2e-82^RecName: Full=Protein SIEVE ELEMENT OCCLUSION C {ECO:0000303|PubMed:20932300};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14576.3^SEO_N^Sieve element occlusion N-terminus^40-86^E:1.7e-05`PF14577.3^SEO_C^Sieve element occlusion C-terminus^243-472^E:1.3e-67","sigP:1^24^0.697^YES",".","ENOG411157J^NA","KEGG:ath:AT1G67790",".",".",".","."]
["TRINITY_DN41323_c1_g1","roots S.abrotanoides","roots S. yangii",2.06704782989806,"0.00758920619248041","0.0134720463928904","TRINITY_DN41323_c1_g1_i3","HS17C_ARATH^HS17C_ARATH^Q:382-44,H:33-156^36.29%ID^E:3e-14^RecName: Full=17.6 kDa class I heat shock protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41323_c1_g1_i3.p1","41-469[-]","HS17C_ARATH^HS17C_ARATH^Q:29-142,H:39-156^38.14%ID^E:7e-17^RecName: Full=17.6 kDa class I heat shock protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00011.18^HSP20^Hsp20/alpha crystallin family^40-141^E:5.6e-22`PF04969.13^CS^CS domain^40-128^E:0.0022",".",".","COG0071^response to heat","KEGG:ath:AT1G53540`KO:K13993","GO:0005737^cellular_component^cytoplasm",".",".","."]
["TRINITY_DN47682_c4_g3","roots S.abrotanoides","roots S. yangii",2.04985057706972,"0.000242855349026808","0.000543066931345181","TRINITY_DN47682_c4_g3_i2","R1B16_SOLDE^R1B16_SOLDE^Q:10-696,H:962-1193^30.04%ID^E:1e-09^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47682_c4_g3_i2.p1","1-699[+]","R1B16_SOLDE^R1B16_SOLDE^Q:4-232,H:962-1193^30.04%ID^E:1e-09^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN44596_c0_g1","roots S.abrotanoides","roots S. yangii",2.04672814135017,"0.000698117935156455","0.00146662505460199","TRINITY_DN44596_c0_g1_i1","GUN4C_ARATH^GUN4C_ARATH^Q:662-123,H:82-265^60.54%ID^E:7e-69^RecName: Full=Tetrapyrrole-binding protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44596_c0_g1_i1.p1","120-878[-]","GUN4C_ARATH^GUN4C_ARATH^Q:72-252,H:81-265^60.22%ID^E:1e-73^RecName: Full=Tetrapyrrole-binding protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05419.9^GUN4^GUN4-like^69-215^E:3.3e-45",".",".","ENOG410XQHG^GUN4-like","KEGG:ath:AT3G59400","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0019899^molecular_function^enzyme binding`GO:0046906^molecular_function^tetrapyrrole binding`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0010019^biological_process^chloroplast-nucleus signaling pathway`GO:0043085^biological_process^positive regulation of catalytic activity",".",".","."]
["TRINITY_DN45249_c6_g1","roots S.abrotanoides","roots S. yangii",2.04594359972586,"0.00997499076120738","0.0172919231206661","TRINITY_DN45249_c6_g1_i1","MBR2_ARATH^MBR2_ARATH^Q:491-718,H:590-664^40.79%ID^E:2e-13^RecName: Full=E3 ubiquitin-protein ligase MBR2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45249_c6_g1_i1.p1","77-730[+]","MBR2_ARATH^MBR2_ARATH^Q:106-214,H:550-664^35.34%ID^E:6e-15^RecName: Full=E3 ubiquitin-protein ligase MBR2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^168-210^E:6e-14`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^168-209^E:1.5e-10`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^168-209^E:8.3e-09`PF17123.2^zf-RING_11^RING-like zinc finger^168-196^E:3.6e-08`PF14634.3^zf-RING_5^zinc-RING finger domain^168-210^E:7.5e-08`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^168-207^E:7.6e-07`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^177-210^E:2.5e-10",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT4G34040","GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009908^biological_process^flower development`GO:0043161^biological_process^proteasome-mediated ubiquitin-dependent protein catabolic process`GO:0016567^biological_process^protein ubiquitination`GO:0040008^biological_process^regulation of growth`GO:0010228^biological_process^vegetative to reproductive phase transition of meristem","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN46392_c0_g2","roots S.abrotanoides","roots S. yangii",2.02434485287316,"0.00035737135223355","0.000782670712710269","TRINITY_DN46392_c0_g2_i1","RLP12_ARATH^RLP12_ARATH^Q:781-17,H:494-753^39.39%ID^E:4e-45^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:790-35,H:205-484^28.93%ID^E:1e-14^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:790-35,H:109-368^30.19%ID^E:7e-13^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:790-26,H:374-584^30.27%ID^E:1e-12^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:289-32,H:115-200^43.02%ID^E:2e-10^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46392_c0_g2_i1.p1","2-793[-]","RLP12_ARATH^RLP12_ARATH^Q:5-259,H:494-753^39.39%ID^E:7e-49^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2-253,H:205-484^28.93%ID^E:4e-18^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2-253,H:109-368^30.19%ID^E:8e-15^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2-256,H:374-584^30.27%ID^E:1e-14^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:169-254,H:115-200^43.02%ID^E:2e-10^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^28-50^E:0.16`PF13855.3^LRR_8^Leucine rich repeat^169-224^E:3.1e-08`PF13516.3^LRR_6^Leucine Rich repeat^214-227^E:1.3",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G71400","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46291_c3_g1","roots S.abrotanoides","roots S. yangii",2.02343833297061,"0.000436875216275953","0.000945305538447022","TRINITY_DN46291_c3_g1_i3","R1A6_SOLDE^R1A6_SOLDE^Q:500-3,H:629-792^42.26%ID^E:4e-42^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:960-496,H:453-620^30.77%ID^E:4e-42^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46291_c3_g1_i3.p1","478-1254[-]","RPM1_ARATH^RPM1_ARATH^Q:162-255,H:170-265^32.29%ID^E:7e-11^RecName: Full=Disease resistance protein RPM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^176-237^E:1.3e-12",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G07040`KO:K13457","GO:0012505^cellular_component^endomembrane system`GO:0019897^cellular_component^extrinsic component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0000166^molecular_function^nucleotide binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN25959_c0_g1","roots S.abrotanoides","roots S. yangii",1.99939299461955,"0.00329688915236531","0.00624277445149357","TRINITY_DN25959_c0_g1_i1","PER43_ARATH^PER43_ARATH^Q:1042-146,H:22-326^63.61%ID^E:8e-126^RecName: Full=Peroxidase 43;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN25959_c0_g1_i1.p1","143-1108[-]","PER43_ARATH^PER43_ARATH^Q:18-321,H:17-326^62.9%ID^E:2e-139^RecName: Full=Peroxidase 43;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^43-284^E:1.6e-63","sigP:1^25^0.882^YES",".","ENOG410YB2Z^peroxidase","KEGG:ath:AT4G25980`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN42114_c0_g1","roots S.abrotanoides","roots S. yangii",1.99899571368052,"0.000117052867138242","0.000272479726794102","TRINITY_DN42114_c0_g1_i1","C3H62_ORYSJ^C3H62_ORYSJ^Q:1396-737,H:122-338^55.45%ID^E:3e-63^RecName: Full=Zinc finger CCCH domain-containing protein 62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42114_c0_g1_i1.p1","173-1630[-]","C3H62_ORYSJ^C3H62_ORYSJ^Q:2-298,H:46-338^46.62%ID^E:4e-74^RecName: Full=Zinc finger CCCH domain-containing protein 62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02037.24^SAP^SAP domain^91-122^E:3.1e-07`PF00642.21^zf-CCCH^Zinc finger C-x8-C-x5-C-x3-H type (and similar)^457-480^E:1.8e-05`PF14608.3^zf-CCCH_2^RNA-binding, Nab2-type zinc finger^461-480^E:0.025",".",".","ENOG410YC7U^zinc finger CCCH domain-containing protein","KEGG:osa:4348530","GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN44251_c0_g1","roots S.abrotanoides","roots S. yangii",1.98091701939866,"0.000152156175661193","0.000349018611292127","TRINITY_DN44251_c0_g1_i2","MSH7_ARATH^MSH7_ARATH^Q:72-548,H:944-1105^56.17%ID^E:1e-52^RecName: Full=DNA mismatch repair protein MSH7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44251_c0_g1_i2.p1","198-554[+]","MSH7_ARATH^MSH7_ARATH^Q:1-117,H:986-1105^54.17%ID^E:3e-38^RecName: Full=DNA mismatch repair protein MSH7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00488.18^MutS_V^MutS domain V^12-59^E:1.2e-09",".",".","COG0249^that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity)","KEGG:ath:AT3G24495`KO:K08737","GO:0032301^cellular_component^MutSalpha complex`GO:0005524^molecular_function^ATP binding`GO:0003684^molecular_function^damaged DNA binding`GO:0000400^molecular_function^four-way junction DNA binding`GO:0032137^molecular_function^guanine/thymine mispair binding`GO:0032138^molecular_function^single base insertion or deletion binding`GO:0043570^biological_process^maintenance of DNA repeat elements`GO:0006298^biological_process^mismatch repair`GO:0045910^biological_process^negative regulation of DNA recombination`GO:0009411^biological_process^response to UV","GO:0005524^molecular_function^ATP binding`GO:0030983^molecular_function^mismatched DNA binding`GO:0006298^biological_process^mismatch repair",".","."]
["TRINITY_DN46489_c0_g1","roots S.abrotanoides","roots S. yangii",1.95701270058804,"0.000935764467204051","0.00192704856855457","TRINITY_DN46489_c0_g1_i1","FAO4A_ARATH^FAO4A_ARATH^Q:1949-3,H:1-664^53.29%ID^E:0^RecName: Full=Long-chain-alcohol oxidase FAO4A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46489_c0_g1_i1.p1","3-1949[-]","FAO4A_ARATH^FAO4A_ARATH^Q:1-649,H:1-664^54.04%ID^E:0^RecName: Full=Long-chain-alcohol oxidase FAO4A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00732.16^GMC_oxred_N^GMC oxidoreductase^221-486^E:3.8e-63",".",".","COG2303^oxidoreductase","KEGG:ath:AT4G19380`KO:K17756","GO:0016021^cellular_component^integral component of membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0046577^molecular_function^long-chain-alcohol oxidase activity","GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45481_c0_g4","roots S.abrotanoides","roots S. yangii",1.93510617808466,{"v":7670217833.00909,"d":"7.67E+09"},"0.000182955059306904","TRINITY_DN45481_c0_g4_i1","NAC45_ARATH^NAC45_ARATH^Q:205-1761,H:1-446^39.59%ID^E:7e-104^RecName: Full=NAC domain-containing protein 45 {ECO:0000312|EMBL:AEE73912.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45481_c0_g4_i1.p1","205-1902[+]","NAC45_ARATH^NAC45_ARATH^Q:1-519,H:1-446^40.11%ID^E:7e-108^RecName: Full=NAC domain-containing protein 45 {ECO:0000312|EMBL:AEE73912.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^7-133^E:3.1e-30",".",".","ENOG4110834^No apical meristem (NAM) protein","KEGG:ath:AT3G03200","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0090603^biological_process^sieve element differentiation`GO:0090602^biological_process^sieve element enucleation`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN39819_c0_g1","roots S.abrotanoides","roots S. yangii",1.92889022600021,"0.00132354699330792","0.00266723595672677","TRINITY_DN39819_c0_g1_i4","TOP3A_ARATH^TOP3A_ARATH^Q:1481-432,H:563-918^57.54%ID^E:9e-117^RecName: Full=DNA topoisomerase 3-alpha;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39819_c0_g1_i4.p1","423-1448[-]","TOP3A_ARATH^TOP3A_ARATH^Q:1-339,H:574-918^57.14%ID^E:4e-117^RecName: Full=DNA topoisomerase 3-alpha;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01396.16^zf-C4_Topoisom^Topoisomerase DNA binding C4 zinc finger^66-104^E:7.6e-09`PF06839.9^zf-GRF^GRF zinc finger^232-271^E:1.3e-10",".",".","COG0550^Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity)","KEGG:ath:AT5G63920`KO:K03165","GO:0005694^cellular_component^chromosome`GO:0003677^molecular_function^DNA binding`GO:0003917^molecular_function^DNA topoisomerase type I activity`GO:0008270^molecular_function^zinc ion binding`GO:0007059^biological_process^chromosome segregation`GO:0006281^biological_process^DNA repair`GO:0006265^biological_process^DNA topological change`GO:0007126^biological_process^meiotic nuclear division`GO:0007067^biological_process^mitotic nuclear division`GO:0000712^biological_process^resolution of meiotic recombination intermediates","GO:0003677^molecular_function^DNA binding`GO:0003916^molecular_function^DNA topoisomerase activity`GO:0006265^biological_process^DNA topological change`GO:0005694^cellular_component^chromosome`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN9867_c0_g1","roots S.abrotanoides","roots S. yangii",1.92821981378973,"0.0103194043199936","0.0178457929135941","TRINITY_DN9867_c0_g1_i1","Y5986_ARATH^Y5986_ARATH^Q:802-83,H:141-388^33.72%ID^E:3e-26^RecName: Full=Uncharacterized protein At5g39865;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN9867_c0_g1_i1.p1","77-1042[-]","Y5986_ARATH^Y5986_ARATH^Q:60-320,H:125-388^34.91%ID^E:3e-38^RecName: Full=Uncharacterized protein At5g39865;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00462.21^Glutaredoxin^Glutaredoxin^165-235^E:3.6e-10`PF04908.12^SH3BGR^SH3-binding, glutamic acid-rich protein^167-255^E:0.00027",".",".","ENOG4111HAI^Glutaredoxin","KEGG:ath:AT5G39865","GO:0005886^cellular_component^plasma membrane`GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN38338_c0_g1","roots S.abrotanoides","roots S. yangii",1.92029166708909,"0.0040470290947834","0.00754708936376848","TRINITY_DN38338_c0_g1_i1","NAC40_ARATH^NAC40_ARATH^Q:1750-992,H:6-237^50.38%ID^E:3e-74^RecName: Full=NAC domain-containing protein 40 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38338_c0_g1_i1.p1","677-1831[-]","NAC40_ARATH^NAC40_ARATH^Q:28-280,H:6-237^50.59%ID^E:1e-77^RecName: Full=NAC domain-containing protein 40 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^39-162^E:1.3e-26",".",".","ENOG4111423^NAC domain-containing protein","KEGG:ath:AT2G27300","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071472^biological_process^cellular response to salt stress`GO:0009908^biological_process^flower development`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0033619^biological_process^membrane protein proteolysis`GO:0009938^biological_process^negative regulation of gibberellic acid mediated signaling pathway`GO:0048573^biological_process^photoperiodism, flowering`GO:0009739^biological_process^response to gibberellin`GO:0009651^biological_process^response to salt stress`GO:0009845^biological_process^seed germination`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44921_c1_g1","roots S.abrotanoides","roots S. yangii",1.90846645494853,"0.000460037232450575","0.000992732492423656","TRINITY_DN44921_c1_g1_i1","PER64_ARATH^PER64_ARATH^Q:110-979,H:27-316^71.72%ID^E:8e-150^RecName: Full=Peroxidase 64;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44921_c1_g1_i1.p1","26-985[+]","PER64_ARATH^PER64_ARATH^Q:8-318,H:5-316^68.27%ID^E:5e-160^RecName: Full=Peroxidase 64;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^44-286^E:1.8e-75","sigP:1^24^0.828^YES",".","ENOG410YE7F^peroxidase","KEGG:ath:AT5G42180`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0009505^cellular_component^plant-type cell wall`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0009664^biological_process^plant-type cell wall organization`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN28781_c0_g1","roots S.abrotanoides","roots S. yangii",1.90795650181086,"0.0011315234436274","0.00230129159850404","TRINITY_DN28781_c0_g1_i1","E2FE_ARATH^E2FE_ARATH^Q:1376-333,H:32-396^49.86%ID^E:4e-101^RecName: Full=E2F transcription factor-like E2FE;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28781_c0_g1_i1.p1","318-1436[-]","E2FE_ARATH^E2FE_ARATH^Q:21-368,H:32-396^52.72%ID^E:4e-116^RecName: Full=E2F transcription factor-like E2FE;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02319.17^E2F_TDP^E2F/DP family winged-helix DNA-binding domain^24-88^E:7.5e-20`PF02319.17^E2F_TDP^E2F/DP family winged-helix DNA-binding domain^152-232^E:1.3e-18",".",".","ENOG4111IGY^E2F transcription factor","KEGG:ath:AT3G48160","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0042023^biological_process^DNA endoreduplication`GO:0032876^biological_process^negative regulation of DNA endoreduplication`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0005667^cellular_component^transcription factor complex",".","."]
["TRINITY_DN130407_c0_g1","roots S.abrotanoides","roots S. yangii",1.90116490295565,"0.00257205903930104","0.00495729472422641","TRINITY_DN130407_c0_g1_i1","REMO_ARATH^REMO_ARATH^Q:319-672,H:73-190^65.25%ID^E:2e-21^RecName: Full=Remorin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN130407_c0_g1_i1.p1","253-681[+]","Y3126_ARATH^Y3126_ARATH^Q:3-140,H:75-212^57.25%ID^E:7e-44^RecName: Full=Uncharacterized protein At3g61260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03763.10^Remorin_C^Remorin, C-terminal region^33-135^E:3.1e-29",".",".","ENOG410YI71^Remorin family","KEGG:ath:AT3G61260","GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole",".",".","."]
["TRINITY_DN39536_c0_g1","roots S.abrotanoides","roots S. yangii",1.895241097425,"0.00122371201292809","0.00247802126056123","TRINITY_DN39536_c0_g1_i2","TCX2_ARATH^TCX2_ARATH^Q:2280-1354,H:246-500^42.12%ID^E:3e-60^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TCX2_ARATH^TCX2_ARATH^Q:732-538,H:612-672^54.55%ID^E:4e-06^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39536_c0_g1_i2.p1","469-3222[-]","TSO1_ARATH^TSO1_ARATH^Q:9-723,H:8-620^30.07%ID^E:1e-71^RecName: Full=CRC domain-containing protein TSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^495-530^E:2e-11`PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^583-618^E:2.4e-11",".",".","ENOG4110UR5^Tesmin TSO1-like CXC domain containing protein","KEGG:ath:AT3G22780","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0048444^biological_process^floral organ morphogenesis`GO:0051302^biological_process^regulation of cell division`GO:0009934^biological_process^regulation of meristem structural organization`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN39315_c0_g2","roots S.abrotanoides","roots S. yangii",1.89135578106747,"0.00200507286781063","0.00392983592869646","TRINITY_DN39315_c0_g2_i1","PYM_ARATH^PYM_ARATH^Q:791-351,H:113-259^60%ID^E:4e-37^RecName: Full=Protein POLYCHOME;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39315_c0_g2_i1.p1","348-1178[-]","PYM_ARATH^PYM_ARATH^Q:1-276,H:1-259^44.68%ID^E:2e-49^RecName: Full=Protein POLYCHOME;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Z500^NA","KEGG:ath:AT2G42260","GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0006952^biological_process^defense response`GO:0042023^biological_process^DNA endoreduplication`GO:0009960^biological_process^endosperm development`GO:0009561^biological_process^megagametogenesis`GO:0007067^biological_process^mitotic nuclear division`GO:0060564^biological_process^negative regulation of APC-Cdc20 complex activity`GO:1900426^biological_process^positive regulation of defense response to bacterium`GO:0010224^biological_process^response to UV-B`GO:0010091^biological_process^trichome branching",".",".","."]
["TRINITY_DN39315_c0_g1","roots S.abrotanoides","roots S. yangii",1.88869820532321,"0.000111923486646279","0.000261126765229099","TRINITY_DN39315_c0_g1_i1","PYM_ARATH^PYM_ARATH^Q:1097-309,H:1-259^45.22%ID^E:5e-46^RecName: Full=Protein POLYCHOME;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39315_c0_g1_i1.p1","306-1097[-]","PYM_ARATH^PYM_ARATH^Q:1-263,H:1-259^46.49%ID^E:1e-55^RecName: Full=Protein POLYCHOME;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Z500^NA","KEGG:ath:AT2G42260","GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0006952^biological_process^defense response`GO:0042023^biological_process^DNA endoreduplication`GO:0009960^biological_process^endosperm development`GO:0009561^biological_process^megagametogenesis`GO:0007067^biological_process^mitotic nuclear division`GO:0060564^biological_process^negative regulation of APC-Cdc20 complex activity`GO:1900426^biological_process^positive regulation of defense response to bacterium`GO:0010224^biological_process^response to UV-B`GO:0010091^biological_process^trichome branching",".",".","."]
["TRINITY_DN45414_c5_g3","roots S.abrotanoides","roots S. yangii",1.88464202551767,"0.000694164627111493","0.00145897802362887","TRINITY_DN45414_c5_g3_i4","CYPH_SOLLC^CYPH_SOLLC^Q:407-3,H:1-135^83.7%ID^E:1e-71^RecName: Full=Peptidyl-prolyl cis-trans isomerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45414_c5_g3_i4.p1","3-470[-]","CYPH_SOLLC^CYPH_SOLLC^Q:22-156,H:1-135^83.7%ID^E:2e-81^RecName: Full=Peptidyl-prolyl cis-trans isomerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^28-156^E:2.6e-37",".",".","COG0652^peptidyl-prolyl cis-trans isomerase activity","KEGG:sly:100736432`KO:K01802","GO:0005737^cellular_component^cytoplasm`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN46550_c0_g3","roots S.abrotanoides","roots S. yangii",1.87798522580506,"0.00138728401096939","0.00278603482717572","TRINITY_DN46550_c0_g3_i3","NLP7_ARATH^NLP7_ARATH^Q:302-1036,H:178-427^28.31%ID^E:4e-19^RecName: Full=Protein NLP7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46550_c0_g3_i3.p1","386-1036[+]","NLP7_ARATH^NLP7_ARATH^Q:1-217,H:206-427^28.69%ID^E:1e-16^RecName: Full=Protein NLP7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4110HDW^RWP-RK domain-containing protein","KEGG:ath:AT4G24020","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0042128^biological_process^nitrate assimilation`GO:0010167^biological_process^response to nitrate`GO:0009414^biological_process^response to water deprivation`GO:0010118^biological_process^stomatal movement`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN42017_c0_g1","roots S.abrotanoides","roots S. yangii",1.86969252899267,"0.000556717641359029","0.0011858845480836","TRINITY_DN42017_c0_g1_i1","KIRO_ACTDE^KIRO_ACTDE^Q:661-245,H:5-145^43.36%ID^E:3e-24^RecName: Full=Kirola {ECO:0000303|PubMed:21309790};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia",".","TRINITY_DN42017_c0_g1_i1.p1","218-664[-]","KIRO_ACTDE^KIRO_ACTDE^Q:2-140,H:5-145^43.36%ID^E:4e-34^RecName: Full=Kirola {ECO:0000303|PubMed:21309790};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^25-141^E:2.4e-29",".",".",".",".","GO:0009607^biological_process^response to biotic stimulus`GO:0016068^biological_process^type I hypersensitivity","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN44555_c0_g1","roots S.abrotanoides","roots S. yangii",1.86707465065201,"0.000615500408841776","0.00130404131964271","TRINITY_DN44555_c0_g1_i1","ATL1_ARATH^ATL1_ARATH^Q:1116-319,H:41-335^45.72%ID^E:2e-66^RecName: Full=RING-H2 finger protein ATL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44555_c0_g1_i1.p1","211-1182[-]","ATL1_ARATH^ATL1_ARATH^Q:22-311,H:40-364^44.31%ID^E:1e-69^RecName: Full=RING-H2 finger protein ATL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^115-158^E:7.4e-14`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^115-158^E:5.6e-10`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^115-157^E:6.1e-08`PF17123.2^zf-RING_11^RING-like zinc finger^116-144^E:1.2e-11`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^116-157^E:3.2e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^116-155^E:6.4e-05`PF12861.4^zf-ANAPC11^Anaphase-promoting complex subunit 11 RING-H2 finger^128-161^E:0.00014",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT1G04360","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0005680^cellular_component^anaphase-promoting complex",".","."]
["TRINITY_DN44432_c2_g1","roots S.abrotanoides","roots S. yangii",1.86517111637869,"0.00238932904660679","0.00462520735009286","TRINITY_DN44432_c2_g1_i1","ATL47_ARATH^ATL47_ARATH^Q:748-1515,H:96-340^51.74%ID^E:1e-59^RecName: Full=RING-H2 finger protein ATL47;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44432_c2_g1_i1.p1","607-1551[+]","ATL46_ARATH^ATL46_ARATH^Q:3-298,H:40-346^45.83%ID^E:5e-84^RecName: Full=RING-H2 finger protein ATL46;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^95-138^E:6.1e-13`PF17123.2^zf-RING_11^RING-like zinc finger^95-124^E:2.7e-08`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^96-137^E:2.1e-06`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^96-137^E:1.1e-05`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^111-138^E:1.8e-09`PF12861.4^zf-ANAPC11^Anaphase-promoting complex subunit 11 RING-H2 finger^111-140^E:3.9e-06",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT5G40250","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0005680^cellular_component^anaphase-promoting complex",".","."]
["TRINITY_DN47485_c7_g3","roots S.abrotanoides","roots S. yangii",1.8611124991219,"0.000893052692351254","0.00184493791327071","TRINITY_DN47485_c7_g3_i3","R1B17_SOLDE^R1B17_SOLDE^Q:3046-1808,H:424-850^36.63%ID^E:2e-65^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1B17_SOLDE^R1B17_SOLDE^Q:1421-714,H:974-1234^26.2%ID^E:1e-09^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47485_c7_g3_i3.p1","1793-3118[-]","R1B17_SOLDE^R1B17_SOLDE^Q:25-437,H:424-850^36.63%ID^E:1e-69^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^155-219^E:8.1e-14`PF00931.19^NB-ARC^NB-ARC domain^217-408^E:1.7e-50",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46819_c3_g1","roots S.abrotanoides","roots S. yangii",1.85800653066713,{"v":5253239894.27709,"d":"5.25E+09"},"0.000127946980374822","TRINITY_DN46819_c3_g1_i2","Y1839_ARATH^Y1839_ARATH^Q:823-110,H:9-257^29.8%ID^E:1e-32^RecName: Full=Probable serine/threonine-protein kinase At1g18390;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46819_c3_g1_i2.p1","95-844[-]","Y1839_ARATH^Y1839_ARATH^Q:8-245,H:9-257^29.8%ID^E:1e-33^RecName: Full=Probable serine/threonine-protein kinase At1g18390;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13947.3^GUB_WAK_bind^Wall-associated receptor kinase galacturonan-binding^33-103^E:9.3e-09`PF14380.3^WAK_assoc^Wall-associated receptor kinase C-terminal^162-231^E:2.7e-15","sigP:1^26^0.73^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G18390","GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0071215^biological_process^cellular response to abscisic acid stimulus`GO:0042631^biological_process^cellular response to water deprivation`GO:0048573^biological_process^photoperiodism, flowering","GO:0030247^molecular_function^polysaccharide binding",".","."]
["TRINITY_DN40002_c0_g1","roots S.abrotanoides","roots S. yangii",1.85377345203608,"0.00583885368691641","0.0105772439617564","TRINITY_DN40002_c0_g1_i4",".",".","TRINITY_DN40002_c0_g1_i4.p1","235-1167[+]","IQD31_ARATH^IQD31_ARATH^Q:13-298,H:240-575^28.12%ID^E:3e-08^RecName: Full=Protein IQ-DOMAIN 31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13178.3^DUF4005^Protein of unknown function (DUF4005)^195-286^E:2e-08",".",".","ENOG410YAVA^IQ-domain","KEGG:ath:AT1G74690","GO:0005829^cellular_component^cytosol`GO:0005875^cellular_component^microtubule associated complex`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN45814_c2_g1","roots S.abrotanoides","roots S. yangii",1.84946322668957,"0.00342710730351037","0.00647618051990958","TRINITY_DN45814_c2_g1_i9","PMTK_ARATH^PMTK_ARATH^Q:1897-128,H:8-603^73.2%ID^E:0^RecName: Full=Probable methyltransferase PMT20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45814_c2_g1_i9.p1","122-1921[-]","PMTK_ARATH^PMTK_ARATH^Q:9-598,H:8-603^73.2%ID^E:0^RecName: Full=Probable methyltransferase PMT20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03141.13^Methyltransf_29^Putative S-adenosyl-L-methionine-dependent methyltransferase^81-588^E:1.6e-212`PF08241.9^Methyltransf_11^Methyltransferase domain^200-293^E:9.8e-07",".",".","ENOG4111CGI^Methyltransferase","KEGG:ath:AT1G31850","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0008168^molecular_function^methyltransferase activity","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45824_c0_g7","roots S.abrotanoides","roots S. yangii",1.84822646008004,"0.00524803679626159","0.00958401281858464","TRINITY_DN45824_c0_g7_i2","COMT1_CATRO^COMT1_CATRO^Q:369-1067,H:8-244^62.03%ID^E:6e-93^RecName: Full=Caffeic acid 3-O-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus`COMT1_CATRO^COMT1_CATRO^Q:1213-1578,H:241-363^61.79%ID^E:2e-42^RecName: Full=Caffeic acid 3-O-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus",".","TRINITY_DN45824_c0_g7_i2.p1","354-1094[+]","COMT1_CATRO^COMT1_CATRO^Q:6-238,H:8-244^62.03%ID^E:5e-103^RecName: Full=Caffeic acid 3-O-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF08100.8^Dimerisation^Dimerisation domain^31-82^E:1e-15`PF00891.15^Methyltransf_2^O-methyltransferase^124-236^E:2.1e-37",".",".",".",".","GO:0047763^molecular_function^caffeate O-methyltransferase activity`GO:0009809^biological_process^lignin biosynthetic process","GO:0046983^molecular_function^protein dimerization activity`GO:0008171^molecular_function^O-methyltransferase activity",".","."]
["TRINITY_DN42542_c0_g2","roots S.abrotanoides","roots S. yangii",1.83880453924346,"0.000133591858583892","0.000308869683135502","TRINITY_DN42542_c0_g2_i2","TONS_ARATH^TONS_ARATH^Q:3985-2204,H:20-609^53.78%ID^E:0^RecName: Full=Protein TONSOKU;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TONS_ARATH^TONS_ARATH^Q:1844-153,H:766-1310^50.09%ID^E:8e-152^RecName: Full=Protein TONSOKU;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42542_c0_g2_i2.p1","1817-4063[-]","TONS_ARATH^TONS_ARATH^Q:27-620,H:20-609^53.78%ID^E:0^RecName: Full=Protein TONSOKU;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12862.4^ANAPC5^Anaphase-promoting complex subunit 5^46-109^E:0.9`PF12862.4^ANAPC5^Anaphase-promoting complex subunit 5^141-203^E:52`PF13181.3^TPR_8^Tetratricopeptide repeat^171-199^E:0.096`PF13424.3^TPR_12^Tetratricopeptide repeat^213-285^E:3.9e-11`PF13176.3^TPR_7^Tetratricopeptide repeat^216-240^E:0.019`PF13181.3^TPR_8^Tetratricopeptide repeat^253-284^E:0.00012`PF12862.4^ANAPC5^Anaphase-promoting complex subunit 5^257-293^E:10`PF13432.3^TPR_16^Tetratricopeptide repeat^258-285^E:0.014`PF13176.3^TPR_7^Tetratricopeptide repeat^260-288^E:0.016`PF12862.4^ANAPC5^Anaphase-promoting complex subunit 5^438-456^E:3200",".",".","COG0457^repeat-containing protein","KEGG:ath:AT3G18730","GO:0016020^cellular_component^membrane`GO:0005654^cellular_component^nucleoplasm`GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0016568^biological_process^chromatin modification`GO:0000086^biological_process^G2/M transition of mitotic cell cycle`GO:0009933^biological_process^meristem structural organization`GO:0009934^biological_process^regulation of meristem structural organization","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN42268_c0_g1","roots S.abrotanoides","roots S. yangii",1.81744099461965,{"v":8306720373.88366,"d":"8.31E+09"},"0.000197328748483832","TRINITY_DN42268_c0_g1_i1","FERON_ARATH^FERON_ARATH^Q:15-494,H:127-327^32.2%ID^E:5e-21^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42268_c0_g1_i1.p1","3-494[+]","FERON_ARATH^FERON_ARATH^Q:5-164,H:127-327^32.2%ID^E:5e-21^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G51550","GO:0043680^cellular_component^filiform apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005622^cellular_component^intracellular`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009742^biological_process^brassinosteroid mediated signaling pathway`GO:0050832^biological_process^defense response to fungus`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:0030308^biological_process^negative regulation of cell growth`GO:0010483^biological_process^pollen tube reception`GO:0009791^biological_process^post-embryonic development`GO:0046777^biological_process^protein autophosphorylation`GO:0009741^biological_process^response to brassinosteroid`GO:0009723^biological_process^response to ethylene`GO:0048364^biological_process^root development`GO:0007338^biological_process^single fertilization",".",".","."]
["TRINITY_DN45250_c0_g2","roots S.abrotanoides","roots S. yangii",1.8160120328949,"0.000469592349322801","0.00101155499440509","TRINITY_DN45250_c0_g2_i2","AB11B_ARATH^AB11B_ARATH^Q:3802-152,H:41-1277^64.86%ID^E:0^RecName: Full=ABC transporter B family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45250_c0_g2_i2.p1","146-3850[-]","AB11B_ARATH^AB11B_ARATH^Q:17-1233,H:41-1277^65.19%ID^E:0^RecName: Full=ABC transporter B family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00664.20^ABC_membrane^ABC transporter transmembrane region^34-308^E:1.2e-61`PF00005.24^ABC_tran^ABC transporter^377-524^E:2.2e-32`PF00664.20^ABC_membrane^ABC transporter transmembrane region^668-939^E:1.2e-50`PF00005.24^ABC_tran^ABC transporter^1010-1158^E:3e-34",".",".","COG1132^(ABC) transporter","KEGG:ath:AT1G02520`KO:K05658","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0010329^molecular_function^auxin efflux transmembrane transporter activity`GO:0010315^biological_process^auxin efflux`GO:0010540^biological_process^basipetal auxin transport","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN46713_c2_g1","roots S.abrotanoides","roots S. yangii",1.81144321580273,"0.00327299840576706","0.00620173935002966","TRINITY_DN46713_c2_g1_i1","C71DB_LOTJA^C71DB_LOTJA^Q:234-956,H:21-265^49.19%ID^E:1e-67^RecName: Full=Cytochrome P450 71D11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN46713_c2_g1_i1.p1","339-1001[+]","C71DB_LOTJA^C71DB_LOTJA^Q:1-206,H:55-265^46.92%ID^E:1e-54^RecName: Full=Cytochrome P450 71D11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus","PF00067.19^p450^Cytochrome P450^1-209^E:4.5e-15",".",".",".",".","GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47747_c0_g1","roots S.abrotanoides","roots S. yangii",1.80666165201458,{"v":6735929371.42609,"d":"6.74E+09"},"0.000161719026092985","TRINITY_DN47747_c0_g1_i2","Y1723_ARATH^Y1723_ARATH^Q:1-1206,H:271-671^30.51%ID^E:3e-32^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:1-1206,H:199-598^26.39%ID^E:2e-25^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:7-1191,H:153-545^29.88%ID^E:4e-25^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:1-951,H:391-686^31.19%ID^E:9e-23^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:403-1194,H:69-330^29.82%ID^E:4e-22^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47747_c0_g1_i2.p1","1-1209[+]","Y1723_ARATH^Y1723_ARATH^Q:1-402,H:271-671^30.75%ID^E:6e-36^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:3-397,H:153-545^29.88%ID^E:9e-29^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:1-402,H:199-598^28.43%ID^E:9e-28^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:3-317,H:393-686^31.79%ID^E:2e-25^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:69-402,H:93-430^29.14%ID^E:7e-21^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1723_ARATH^Y1723_ARATH^Q:184-401,H:72-285^25.68%ID^E:7e-10^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^180-200^E:0.5`PF13516.3^LRR_6^Leucine Rich repeat^299-313^E:1.5`PF00560.30^LRR_1^Leucine Rich Repeat^301-322^E:0.58",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G17230","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46076_c1_g1","roots S.abrotanoides","roots S. yangii",1.80243650083544,"0.00183578787279874","0.00361860662813896","TRINITY_DN46076_c1_g1_i4","Y3037_ARATH^Y3037_ARATH^Q:119-892,H:490-755^43.07%ID^E:1e-55^RecName: Full=Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46076_c1_g1_i4.p1","101-949[+]","Y3037_ARATH^Y3037_ARATH^Q:7-264,H:490-755^43.07%ID^E:6e-62^RecName: Full=Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^7-156^E:1.7e-12`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^8-156^E:2.2e-16",".",".","ENOG410XPGM^inactive leucine-rich repeat receptor-like protein kinase","KEGG:ath:AT3G03770","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46509_c4_g2","roots S.abrotanoides","roots S. yangii",1.79666730716828,"0.00397509443458008","0.00742384289797487","TRINITY_DN46509_c4_g2_i1","GPDL2_ARATH^GPDL2_ARATH^Q:185-391,H:789-858^47.14%ID^E:9e-15^RecName: Full=Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46509_c4_g2_i1.p1","2-391[+]","GPDL2_ARATH^GPDL2_ARATH^Q:62-130,H:789-858^47.14%ID^E:8e-15^RecName: Full=Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^79-129^E:2.1e-05",".",".","COG0584^glycerophosphoryl diester phosphodiesterase","KEGG:ath:AT1G66980","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0008889^molecular_function^glycerophosphodiester phosphodiesterase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006968^biological_process^cellular defense response`GO:0006071^biological_process^glycerol metabolic process`GO:0006629^biological_process^lipid metabolic process","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46788_c0_g2","roots S.abrotanoides","roots S. yangii",1.7898333453276,{"v":7419702566.15072,"d":"7.42E+09"},"0.000177206521412785","TRINITY_DN46788_c0_g2_i3","CAX3_ARATH^CAX3_ARATH^Q:205-1530,H:1-458^70.31%ID^E:7e-169^RecName: Full=Vacuolar cation/proton exchanger 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46788_c0_g2_i3.p1","184-1557[+]","CAX1_ARATH^CAX1_ARATH^Q:20-435,H:13-436^71.93%ID^E:0^RecName: Full=Vacuolar cation/proton exchanger 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^99-256^E:1e-23`PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^287-430^E:1.2e-17",".",".","COG0387^Calcium Proton","KEGG:ath:AT2G38170`KO:K07300","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0015369^molecular_function^calcium:proton antiporter activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0030026^biological_process^cellular manganese ion homeostasis`GO:0006882^biological_process^cellular zinc ion homeostasis`GO:0009631^biological_process^cold acclimation`GO:0055062^biological_process^phosphate ion homeostasis`GO:0009651^biological_process^response to salt stress","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45252_c1_g8","roots S.abrotanoides","roots S. yangii",1.78335537851539,"0.00160129922871359","0.00318697213116935","TRINITY_DN45252_c1_g8_i1","DTX24_ARATH^DTX24_ARATH^Q:168-1592,H:17-490^54.95%ID^E:0^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45252_c1_g8_i1.p1","150-1604[+]","DTX24_ARATH^DTX24_ARATH^Q:12-481,H:22-490^55.32%ID^E:0^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^39-197^E:3.2e-24`PF01554.15^MatE^MatE^259-419^E:2.7e-22",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT3G03620`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN58625_c0_g1","roots S.abrotanoides","roots S. yangii",1.77882960935686,"0.00461129756838976","0.0085124382504214","TRINITY_DN58625_c0_g1_i1","SHR_ARATH^SHR_ARATH^Q:1223-69,H:138-531^51.49%ID^E:2e-127^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN58625_c0_g1_i1.p1","63-1340[-]","SHR_ARATH^SHR_ARATH^Q:28-424,H:128-531^50.97%ID^E:5e-137^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03514.11^GRAS^GRAS domain family^47-422^E:1.3e-92",".",".","ENOG41116YR^Transcription factor","KEGG:ath:AT4G37650","GO:0005769^cellular_component^early endosome`GO:0005770^cellular_component^late endosome`GO:0005634^cellular_component^nucleus`GO:0055037^cellular_component^recycling endosome`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008356^biological_process^asymmetric cell division`GO:0055072^biological_process^iron ion homeostasis`GO:0048366^biological_process^leaf development`GO:0045930^biological_process^negative regulation of mitotic cell cycle`GO:0009956^biological_process^radial pattern formation`GO:0032350^biological_process^regulation of hormone metabolic process`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN42742_c0_g1","roots S.abrotanoides","roots S. yangii",1.77831553774839,"0.00017363285984332","0.000395071314078356","TRINITY_DN42742_c0_g1_i1","TCX2_ARATH^TCX2_ARATH^Q:2361-217,H:1-674^42.59%ID^E:8e-119^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42742_c0_g1_i1.p1","214-2409[-]","TCX2_ARATH^TCX2_ARATH^Q:17-731,H:1-674^42.46%ID^E:2e-143^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^451-486^E:6.4e-12`PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^536-572^E:7.1e-12",".",".","ENOG4110UR5^Tesmin TSO1-like CXC domain containing protein","KEGG:ath:AT4G14770","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0007275^biological_process^multicellular organism development",".",".","."]
["TRINITY_DN32038_c0_g1","roots S.abrotanoides","roots S. yangii",1.77115125399737,"0.000842104179966004","0.00174626932554773","TRINITY_DN32038_c0_g1_i2","SM3L3_ARATH^SM3L3_ARATH^Q:2559-70,H:369-1186^66.59%ID^E:0^RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32038_c0_g1_i2.p1","46-3609[-]","SM3L3_ARATH^SM3L3_ARATH^Q:351-1180,H:369-1186^66.59%ID^E:0^RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08797.8^HIRAN^HIRAN domain^382-486^E:5.1e-13`PF04851.12^ResIII^Type III restriction enzyme, res subunit^610-847^E:1.5e-06`PF00176.20^SNF2_N^SNF2 family N-terminal domain^615-982^E:3e-86`PF00270.26^DEAD^DEAD/DEAH box helicase^682-827^E:3.5e-06`PF13920.3^zf-C3HC4_3^Zinc finger, C3HC4 type (RING finger)^1031-1079^E:3.7e-10`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^1033-1073^E:1.1e-07`PF13639.3^zf-RING_2^Ring finger domain^1033-1074^E:4.3e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^1034-1073^E:1.6e-07`PF14447.3^Prok-RING_4^Prokaryotic RING finger family 4^1034-1081^E:1.4e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^1034-1086^E:1.2e-06`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^1107-1171^E:0.00024",".",".","ENOG410XPDU^Transcription termination factor, RNA polymerase II","KEGG:ath:AT5G43530`KO:K15505","GO:0009941^cellular_component^chloroplast envelope`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding`GO:0016568^biological_process^chromatin modification`GO:0006281^biological_process^DNA repair","GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding`GO:0016818^molecular_function^hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides`GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity`GO:0005515^molecular_function^protein binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47604_c2_g7","roots S.abrotanoides","roots S. yangii",1.76823527220395,"0.000548574379956434","0.00116978682365586","TRINITY_DN47604_c2_g7_i1","Y4374_ARATH^Y4374_ARATH^Q:587-1282,H:355-608^41.02%ID^E:5e-33^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47604_c2_g7_i1.p1","212-1318[+]","Y4374_ARATH^Y4374_ARATH^Q:82-357,H:323-608^40.2%ID^E:1e-50^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^99-256^E:1.5e-12`PF00069.22^Pkinase^Protein kinase domain^99-262^E:4.6e-09",".",".","ENOG410YDXU^Leucine rich repeat N-terminal domain","KEGG:ath:AT4G23740","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN38308_c0_g1","roots S.abrotanoides","roots S. yangii",1.76185646765948,"0.00271360489665668","0.00521212857754068","TRINITY_DN38308_c0_g1_i2","MYO2_ARATH^MYO2_ARATH^Q:1384-2292,H:864-1219^31.13%ID^E:2e-33^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MYO2_ARATH^MYO2_ARATH^Q:526-696,H:2-56^57.89%ID^E:4e-12^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38308_c0_g1_i2.p1","1573-2307[+]","MYO2_ARATH^MYO2_ARATH^Q:11-240,H:945-1219^33.33%ID^E:1e-31^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00612.24^IQ^IQ calmodulin-binding motif^11-27^E:0.00019",".",".","COG5022^myosin heavy chain","KEGG:ath:AT5G54280`KO:K10357","GO:0005768^cellular_component^endosome`GO:0016459^cellular_component^myosin complex`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0003774^molecular_function^motor activity`GO:0030048^biological_process^actin filament-based movement`GO:0006897^biological_process^endocytosis","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43441_c4_g4","roots S.abrotanoides","roots S. yangii",1.75246603945699,{"v":9840259145.43901,"d":"9.84E+09"},"0.000231378171154348","TRINITY_DN43441_c4_g4_i2","QKY_ARATH^QKY_ARATH^Q:1122-745,H:18-150^43.61%ID^E:2e-24^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`QKY_ARATH^QKY_ARATH^Q:282-1,H:329-433^40.57%ID^E:7e-12^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43441_c4_g4_i2.p1","1-1125[-]","QKY_ARATH^QKY_ARATH^Q:2-127,H:18-150^43.61%ID^E:9e-25^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`QKY_ARATH^QKY_ARATH^Q:282-375,H:329-433^40.57%ID^E:7e-12^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^2-102^E:4.9e-20`PF00168.27^C2^C2 domain^289-368^E:1.5e-12",".",".","ENOG410Y912^Plant phosphoribosyltransferase C-terminal","KEGG:ath:AT1G74720","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005509^molecular_function^calcium ion binding`GO:0005544^molecular_function^calcium-dependent phospholipid binding`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0048513^biological_process^animal organ development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN38854_c0_g1","roots S.abrotanoides","roots S. yangii",1.74614213582134,"0.0226008888247435","0.0365679213997428","TRINITY_DN38854_c0_g1_i2","RL354_ARATH^RL354_ARATH^Q:395-39,H:4-122^57.98%ID^E:3e-34^RecName: Full=60S ribosomal protein L35-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38854_c0_g1_i2.p1","33-407[-]","RL354_ARATH^RL354_ARATH^Q:5-123,H:4-122^57.98%ID^E:2e-34^RecName: Full=60S ribosomal protein L35-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00831.20^Ribosomal_L29^Ribosomal L29 protein^9-63^E:8.6e-16",".",".","COG0255^50s ribosomal protein l29",".","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44660_c0_g2","roots S.abrotanoides","roots S. yangii",1.74418856563902,"0.000388855289827874","0.000847239991662557","TRINITY_DN44660_c0_g2_i3","TLPH_ARATH^TLPH_ARATH^Q:67-699,H:27-239^56.48%ID^E:9e-70^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44660_c0_g2_i3.p1","1-933[+]","PR5_ARATH^PR5_ARATH^Q:5-233,H:9-239^56.78%ID^E:5e-82^RecName: Full=Pathogenesis-related protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00314.14^Thaumatin^Thaumatin family^23-233^E:2e-82","sigP:1^20^0.759^YES",".","ENOG4111KEV^thaumatin-like protein","KEGG:ath:AT1G75040","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005773^cellular_component^vacuole`GO:0031540^biological_process^regulation of anthocyanin biosynthetic process`GO:0046686^biological_process^response to cadmium ion`GO:0010224^biological_process^response to UV-B`GO:0009615^biological_process^response to virus`GO:0009627^biological_process^systemic acquired resistance",".",".","."]
["TRINITY_DN43603_c1_g1","roots S.abrotanoides","roots S. yangii",1.7425178051184,"0.000430688422495101","0.000932568599886517","TRINITY_DN43603_c1_g1_i1","P2B15_ARATH^P2B15_ARATH^Q:1101-1877,H:3-280^45.68%ID^E:5e-61^RecName: Full=F-box protein PP2-B15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43603_c1_g1_i1.p1","1092-1883[+]","P2B15_ARATH^P2B15_ARATH^Q:4-262,H:3-280^45.68%ID^E:3e-77^RecName: Full=F-box protein PP2-B15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14299.3^PP2^Phloem protein 2^94-261^E:4.4e-43",".",".","ENOG4111AE6^F-box protein","KEGG:ath:AT1G09155","GO:0030246^molecular_function^carbohydrate binding",".",".","."]
["TRINITY_DN45762_c4_g6","roots S.abrotanoides","roots S. yangii",1.73501184951602,"0.0015834623993395","0.00315394374821394","TRINITY_DN45762_c4_g6_i1","FERON_ARATH^FERON_ARATH^Q:710-237,H:38-192^38.99%ID^E:3e-22^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45762_c4_g6_i1.p1","3-812[-]","FERON_ARATH^FERON_ARATH^Q:35-192,H:38-192^38.99%ID^E:1e-22^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11721.5^Malectin^Di-glucose binding within endoplasmic reticulum^33-175^E:7.7e-06`PF12819.4^Malectin_like^Carbohydrate-binding protein of the ER^35-192^E:8e-07","sigP:1^24^0.911^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G51550","GO:0043680^cellular_component^filiform apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005622^cellular_component^intracellular`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009742^biological_process^brassinosteroid mediated signaling pathway`GO:0050832^biological_process^defense response to fungus`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:0030308^biological_process^negative regulation of cell growth`GO:0010483^biological_process^pollen tube reception`GO:0009791^biological_process^post-embryonic development`GO:0046777^biological_process^protein autophosphorylation`GO:0009741^biological_process^response to brassinosteroid`GO:0009723^biological_process^response to ethylene`GO:0048364^biological_process^root development`GO:0007338^biological_process^single fertilization",".",".","."]
["TRINITY_DN46803_c2_g3","roots S.abrotanoides","roots S. yangii",1.73178500877406,"0.00347938648441974","0.00656653412773874","TRINITY_DN46803_c2_g3_i6","IX10L_ARATH^IX10L_ARATH^Q:1476-322,H:31-415^87.01%ID^E:0^RecName: Full=Probable beta-1,4-xylosyltransferase IRX10L;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46803_c2_g3_i6.p1","319-1344[-]","IX10L_ARATH^IX10L_ARATH^Q:1-341,H:75-415^86.8%ID^E:0^RecName: Full=Probable beta-1,4-xylosyltransferase IRX10L;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03016.12^Exostosin^Exostosin family^2-269^E:7e-62",".",".","ENOG410XTFH^Exostosin","KEGG:ath:AT5G61840","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0047517^molecular_function^1,4-beta-D-xylan synthase activity`GO:0080116^molecular_function^glucuronoxylan glucuronosyltransferase activity`GO:0042546^biological_process^cell wall biogenesis`GO:0071555^biological_process^cell wall organization`GO:0010417^biological_process^glucuronoxylan biosynthetic process`GO:0009834^biological_process^plant-type secondary cell wall biogenesis`GO:0045492^biological_process^xylan biosynthetic process",".",".","."]
["TRINITY_DN19983_c0_g1","roots S.abrotanoides","roots S. yangii",1.718651316903,"0.00954319725680874","0.0166187400146651","TRINITY_DN19983_c0_g1_i1","B120_ARATH^B120_ARATH^Q:57-665,H:616-816^57.14%ID^E:1e-72^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase B120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN19983_c0_g1_i1.p1","3-503[+]","B120_ARATH^B120_ARATH^Q:19-163,H:616-759^64.83%ID^E:6e-59^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase B120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^25-133^E:5.8e-25`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^26-135^E:6.7e-24",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G21390","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006952^biological_process^defense response`GO:0006468^biological_process^protein phosphorylation`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN36765_c0_g1","roots S.abrotanoides","roots S. yangii",1.71043194847332,"0.00430295969439228","0.00799076145294528","TRINITY_DN36765_c0_g1_i4","GEML6_ARATH^GEML6_ARATH^Q:187-579,H:69-195^54.96%ID^E:5e-34^RecName: Full=GEM-like protein 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36765_c0_g1_i4.p1","46-549[+]","GEML6_ARATH^GEML6_ARATH^Q:48-167,H:69-186^57.5%ID^E:9e-39^RecName: Full=GEM-like protein 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02893.17^GRAM^GRAM domain^87-149^E:1.5e-08",".",".","ENOG410YH6H^GEM-like protein","KEGG:ath:AT5G23350",".",".",".","."]
["TRINITY_DN127391_c0_g1","roots S.abrotanoides","roots S. yangii",1.6862181616762,"0.0136711324882521","0.0231183872695184","TRINITY_DN127391_c0_g1_i1","CIPK5_ARATH^CIPK5_ARATH^Q:71-382,H:1-104^62.5%ID^E:2e-38^RecName: Full=CBL-interacting serine/threonine-protein kinase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN127391_c0_g1_i1.p1","71-382[+]","CIPK5_ARATH^CIPK5_ARATH^Q:1-104,H:1-104^62.5%ID^E:8e-39^RecName: Full=CBL-interacting serine/threonine-protein kinase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^12-103^E:1.9e-21`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^13-100^E:2.2e-14",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G10930","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0007165^biological_process^signal transduction","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN42563_c0_g1","roots S.abrotanoides","roots S. yangii",1.67471628948776,"0.000128736472454482","0.000298236114488904","TRINITY_DN42563_c0_g1_i1","FIMB2_ARATH^FIMB2_ARATH^Q:2144-258,H:1-626^76.51%ID^E:0^RecName: Full=Fimbrin-2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42563_c0_g1_i1.p1","117-2144[-]","FIMB2_ARATH^FIMB2_ARATH^Q:1-656,H:1-652^75.19%ID^E:0^RecName: Full=Fimbrin-2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00307.28^CH^Calponin homology (CH) domain^151-238^E:8.2e-17`PF00307.28^CH^Calponin homology (CH) domain^270-371^E:3.9e-21`PF00307.28^CH^Calponin homology (CH) domain^396-498^E:4.3e-20`PF00307.28^CH^Calponin homology (CH) domain^523-623^E:1.5e-18",".",".","COG5069^Microtubule associated monoxygenase, calponin and LIM domain containing","KEGG:ath:AT5G48460","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46386_c0_g4","roots S.abrotanoides","roots S. yangii",1.67091710375857,"0.00404945275699256","0.0075511051443626","TRINITY_DN46386_c0_g4_i1","Y3475_ARATH^Y3475_ARATH^Q:237-521,H:24-117^48.42%ID^E:4e-19^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46386_c0_g4_i1.p1","138-581[+]","Y3475_ARATH^Y3475_ARATH^Q:34-142,H:24-131^46.79%ID^E:1e-22^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:89-147,H:150-208^38.98%ID^E:1e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^33-73^E:7.3e-13`PF00560.30^LRR_1^Leucine Rich Repeat^127-144^E:0.11","sigP:1^28^0.835^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN15924_c0_g1","roots S.abrotanoides","roots S. yangii",1.64867290835577,"0.00743961394142063","0.0132224574223799","TRINITY_DN15924_c0_g1_i1","BAG3_ARATH^BAG3_ARATH^Q:131-508,H:15-140^39.06%ID^E:2e-16^RecName: Full=BAG family molecular chaperone regulator 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN15924_c0_g1_i1.p1","2-517[+]","BAG3_ARATH^BAG3_ARATH^Q:44-169,H:15-140^39.06%ID^E:3e-20^RecName: Full=BAG family molecular chaperone regulator 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14560.3^Ubiquitin_2^Ubiquitin-like domain^79-124^E:0.19`PF00240.20^ubiquitin^Ubiquitin family^85-141^E:5.1e-08",".",".","ENOG4111WNH^BCL-2-associated athanogene","KEGG:ath:AT5G07220",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44512_c2_g4","roots S.abrotanoides","roots S. yangii",1.64373924498893,"0.0047038427945573","0.00866952978382094","TRINITY_DN44512_c2_g4_i1","EXPA8_ARATH^EXPA8_ARATH^Q:1150-452,H:22-253^81.62%ID^E:5e-125^RecName: Full=Expansin-A8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44512_c2_g4_i1.p1","449-1219[-]","EXPA8_ARATH^EXPA8_ARATH^Q:13-256,H:11-253^78.78%ID^E:3e-140^RecName: Full=Expansin-A8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03330.15^DPBB_1^Lytic transglycolase^67-153^E:8.2e-23`PF01357.18^Pollen_allerg_1^Pollen allergen^165-242^E:1.5e-31","sigP:1^23^0.843^YES",".","ENOG410YCRV^loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found","KEGG:ath:AT2G40610","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0016020^cellular_component^membrane`GO:0009664^biological_process^plant-type cell wall organization`GO:0006949^biological_process^syncytium formation",".",".","."]
["TRINITY_DN19889_c0_g1","roots S.abrotanoides","roots S. yangii",1.64016272243087,"0.0227860090984385","0.0368375791366933","TRINITY_DN19889_c0_g1_i1","ERF62_ARATH^ERF62_ARATH^Q:687-496,H:247-312^66.67%ID^E:1e-09^RecName: Full=Ethylene-responsive transcription factor ERF062;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN19889_c0_g1_i1.p1","160-687[-]","ERF62_ARATH^ERF62_ARATH^Q:1-174,H:247-382^43.75%ID^E:6e-30^RecName: Full=Ethylene-responsive transcription factor ERF062;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YPFQ^Transcription factor","KEGG:ath:AT4G13620","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46303_c0_g1","roots S.abrotanoides","roots S. yangii",1.61203766758333,"0.00282789181990783","0.0054163782108613","TRINITY_DN46303_c0_g1_i2","Y1133_ARATH^Y1133_ARATH^Q:38-1186,H:183-550^33%ID^E:3e-57^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46303_c0_g1_i2.p1","2-1186[+]","Y1130_ARATH^Y1130_ARATH^Q:13-395,H:176-535^34.7%ID^E:2e-61^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00954.17^S_locus_glycop^S-locus glycoprotein domain^87-164^E:1.1e-21`PF08276.8^PAN_2^PAN-like domain^195-250^E:4.5e-12",".",".","COG0515^Serine Threonine protein kinase",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen",".","."]
["TRINITY_DN47550_c0_g6","roots S.abrotanoides","roots S. yangii",1.60622285650969,"0.000120925167455663","0.000281189256314803","TRINITY_DN47550_c0_g6_i1","DPOLA_ORYSJ^DPOLA_ORYSJ^Q:55-4722,H:32-1534^61.11%ID^E:0^RecName: Full=DNA polymerase alpha catalytic subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47550_c0_g6_i1.p1","115-4725[+]","DPOLA_ORYSJ^DPOLA_ORYSJ^Q:1-1536,H:50-1534^62.04%ID^E:0^RecName: Full=DNA polymerase alpha catalytic subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF12254.5^DNA_pol_alpha_N^DNA polymerase alpha subunit p180 N terminal^2-46^E:1.4e-14`PF03104.16^DNA_pol_B_exo1^DNA polymerase family B, exonuclease domain^435-764^E:3.1e-29`PF00136.18^DNA_pol_B^DNA polymerase family B^824-1289^E:2.2e-125`PF08996.7^zf-DNA_Pol^DNA Polymerase alpha zinc finger^1329-1531^E:2.8e-42",".",".","COG0417^DNA polymerase",".","GO:0005658^cellular_component^alpha DNA polymerase:primase complex`GO:0005634^cellular_component^nucleus`GO:0008408^molecular_function^3'-5' exonuclease activity`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0003677^molecular_function^DNA binding`GO:0003896^molecular_function^DNA primase activity`GO:0003887^molecular_function^DNA-directed DNA polymerase activity`GO:0046872^molecular_function^metal ion binding`GO:0001882^molecular_function^nucleoside binding`GO:0000166^molecular_function^nucleotide binding`GO:0071897^biological_process^DNA biosynthetic process`GO:0006270^biological_process^DNA replication initiation`GO:0006269^biological_process^DNA replication, synthesis of RNA primer`GO:0006303^biological_process^double-strand break repair via nonhomologous end joining`GO:0006273^biological_process^lagging strand elongation`GO:0006272^biological_process^leading strand elongation","GO:0008408^molecular_function^3'-5' exonuclease activity`GO:0000166^molecular_function^nucleotide binding`GO:0003677^molecular_function^DNA binding`GO:0001882^molecular_function^nucleoside binding`GO:0003887^molecular_function^DNA-directed DNA polymerase activity`GO:0006260^biological_process^DNA replication",".","."]
["TRINITY_DN46759_c3_g8","roots S.abrotanoides","roots S. yangii",1.60162182776732,"0.00282100652704399","0.00540504308935996","TRINITY_DN46759_c3_g8_i1","Y5142_ARATH^Y5142_ARATH^Q:160-447,H:13-111^31.31%ID^E:2e-09^RecName: Full=B3 domain-containing protein At5g60142;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46759_c3_g8_i1.p1","148-1332[+]","Y5142_ARATH^Y5142_ARATH^Q:5-100,H:13-111^31.31%ID^E:2e-09^RecName: Full=B3 domain-containing protein At5g60142;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02362.18^B3^B3 DNA binding domain^7-86^E:3.7e-10`PF02362.18^B3^B3 DNA binding domain^303-386^E:1.5e-08",".",".",".","KEGG:ath:AT5G60142","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN45531_c2_g2","roots S.abrotanoides","roots S. yangii",1.60125556342038,"0.00031762378807213","0.000700286140813019","TRINITY_DN45531_c2_g2_i2","SUT13_ARATH^SUT13_ARATH^Q:257-1666,H:23-494^76.06%ID^E:0^RecName: Full=Sulfate transporter 1.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SUT13_ARATH^SUT13_ARATH^Q:1743-2231,H:492-653^74.85%ID^E:0^RecName: Full=Sulfate transporter 1.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45531_c2_g2_i2.p1","200-1708[+]","SUT13_ARATH^SUT13_ARATH^Q:4-489,H:7-494^74.39%ID^E:0^RecName: Full=Sulfate transporter 1.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00916.17^Sulfate_transp^Sulfate permease family^88-468^E:3.8e-136",".",".","COG0659^sulfate transporter","KEGG:ath:AT1G22150`KO:K17470","GO:0005887^cellular_component^integral component of plasma membrane`GO:0008271^molecular_function^secondary active sulfate transmembrane transporter activity`GO:0015116^molecular_function^sulfate transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:1902358^biological_process^sulfate transmembrane transport","GO:0015116^molecular_function^sulfate transmembrane transporter activity`GO:0008272^biological_process^sulfate transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46705_c0_g6","roots S.abrotanoides","roots S. yangii",1.59296206427922,"0.00326898891624308","0.00619498231882447","TRINITY_DN46705_c0_g6_i2","CXE15_ARATH^CXE15_ARATH^Q:1146-211,H:8-325^51.1%ID^E:7e-99^RecName: Full=Probable carboxylesterase 15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46705_c0_g6_i2.p1","193-1197[-]","CXE15_ARATH^CXE15_ARATH^Q:18-329,H:8-325^51.1%ID^E:4e-102^RecName: Full=Probable carboxylesterase 15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00135.25^COesterase^Carboxylesterase family^67-126^E:7.3e-07`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^86-309^E:2.3e-58",".",".","COG0657^alpha beta hydrolase fold-3 domain protein","KEGG:ath:AT5G06570","GO:0052689^molecular_function^carboxylic ester hydrolase activity","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47715_c3_g4","roots S.abrotanoides","roots S. yangii",1.58997712763432,"0.000836519518705464","0.00173507474368268","TRINITY_DN47715_c3_g4_i1","Y5900_ARATH^Y5900_ARATH^Q:326-6,H:300-417^30.51%ID^E:7e-09^RecName: Full=Putative receptor-like protein kinase At5g39000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47715_c3_g4_i1.p1","3-344[-]","Y5900_ARATH^Y5900_ARATH^Q:7-113,H:300-417^30.51%ID^E:6e-09^RecName: Full=Putative receptor-like protein kinase At5g39000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G39000","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity",".",".","."]
["TRINITY_DN46134_c3_g1","roots S.abrotanoides","roots S. yangii",1.57195509095589,"0.000526037195235696","0.00112533537034535","TRINITY_DN46134_c3_g1_i1","PR1C_TOBAC^PR1C_TOBAC^Q:3-332,H:7-116^33.33%ID^E:2e-11^RecName: Full=Pathogenesis-related protein 1C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46134_c3_g1_i1.p1","3-368[+]","PR1C_TOBAC^PR1C_TOBAC^Q:1-110,H:7-116^33.33%ID^E:2e-11^RecName: Full=Pathogenesis-related protein 1C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00188.23^CAP^Cysteine-rich secretory protein family^31-105^E:1.4e-09","sigP:1^24^0.616^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0005773^cellular_component^vacuole`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN43262_c0_g1","roots S.abrotanoides","roots S. yangii",1.56893935178606,"0.00506778246216705","0.00928882903276106","TRINITY_DN43262_c0_g1_i6","HTR12_ARATH^HTR12_ARATH^Q:798-388,H:41-178^56.52%ID^E:5e-34^RecName: Full=Histone H3-like centromeric protein HTR12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43262_c0_g1_i6.p1","385-834[-]","HTR12_ARATH^HTR12_ARATH^Q:13-149,H:41-178^56.52%ID^E:6e-48^RecName: Full=Histone H3-like centromeric protein HTR12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^15-142^E:5.5e-38",".",".","COG2036^Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling","KEGG:ath:AT1G01370`KO:K11253","GO:0000785^cellular_component^chromatin`GO:0000775^cellular_component^chromosome, centromeric region`GO:0000777^cellular_component^condensed chromosome kinetochore`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0051301^biological_process^cell division`GO:0009567^biological_process^double fertilization forming a zygote and endosperm`GO:0051307^biological_process^meiotic chromosome separation`GO:0007126^biological_process^meiotic nuclear division","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN44280_c4_g4","roots S.abrotanoides","roots S. yangii",1.56354607655057,"0.00340938479074553","0.00644661436274081","TRINITY_DN44280_c4_g4_i1","WRK40_ARATH^WRK40_ARATH^Q:75-779,H:33-294^40.46%ID^E:6e-50^RecName: Full=Probable WRKY transcription factor 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44280_c4_g4_i1.p1","168-848[+]","WRK18_ARATH^WRK18_ARATH^Q:42-206,H:156-306^49.7%ID^E:7e-49^RecName: Full=WRKY transcription factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^62-120^E:6.2e-24",".",".","ENOG410YHES^WRKY transcription factor",".","GO:0005634^cellular_component^nucleus`GO:0042802^molecular_function^identical protein binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:0031347^biological_process^regulation of defense response`GO:0010200^biological_process^response to chitin`GO:0002237^biological_process^response to molecule of bacterial origin`GO:0009751^biological_process^response to salicylic acid`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46040_c3_g1","roots S.abrotanoides","roots S. yangii",1.56126676263152,"0.00437189628296609","0.00810800172855141","TRINITY_DN46040_c3_g1_i3","AUR3_ARATH^AUR3_ARATH^Q:293-1108,H:12-283^81.99%ID^E:1e-160^RecName: Full=Serine/threonine-protein kinase Aurora-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46040_c3_g1_i3.p1","2227-3111[-]","GRF12_ORYSJ^GRF12_ORYSJ^Q:53-158,H:79-183^51.85%ID^E:9e-30^RecName: Full=Growth-regulating factor 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08879.7^WRC^WRC^117-158^E:4.4e-17",".",".","ENOG410YJFR^growth regulating factor protein","KEGG:osa:4336731","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0032502^biological_process^developmental process`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45491_c1_g3","roots S.abrotanoides","roots S. yangii",1.56001060452508,"0.000471431974526842","0.00101528293512059","TRINITY_DN45491_c1_g3_i1","PDR1_TOBAC^PDR1_TOBAC^Q:1104-67,H:1058-1403^70.52%ID^E:5e-164^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:921-148,H:469-725^21.43%ID^E:6e-07^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45491_c1_g3_i1.p1","1-1113[-]","PDR1_TOBAC^PDR1_TOBAC^Q:4-358,H:1058-1412^69.58%ID^E:0^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:65-322,H:469-725^22.39%ID^E:3e-07^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01061.21^ABC2_membrane^ABC-2 type transporter^109-322^E:5e-57",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44344_c0_g2","roots S.abrotanoides","roots S. yangii",1.55948358211706,"0.00898821381991346","0.0157316263055752","TRINITY_DN44344_c0_g2_i1","ZAT4_ARATH^ZAT4_ARATH^Q:869-1216,H:193-305^47.86%ID^E:8e-25^RecName: Full=Zinc finger protein ZAT4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44344_c0_g2_i1.p1","191-1276[+]","ZAT9_ARATH^ZAT9_ARATH^Q:9-342,H:4-281^28.66%ID^E:7e-28^RecName: Full=Zinc finger protein ZAT9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13912.3^zf-C2H2_6^C2H2-type zinc finger^9-32^E:5.1e-05`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^72-94^E:9.6e-09`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^228-252^E:4.2e-11`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^281-304^E:1.8e-10",".",".","COG5048^Zinc finger protein","KEGG:ath:AT3G60580","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN46468_c0_g9","roots S.abrotanoides","roots S. yangii",1.5570953164938,"0.00201094496680631","0.00394079206884101","TRINITY_DN46468_c0_g9_i1","LHT1_ARATH^LHT1_ARATH^Q:1543-236,H:12-446^75.46%ID^E:0^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46468_c0_g9_i1.p1","233-1582[-]","LHT1_ARATH^LHT1_ARATH^Q:14-449,H:12-446^75.46%ID^E:0^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01490.15^Aa_trans^Transmembrane amino acid transporter protein^37-433^E:1e-105`PF03222.10^Trp_Tyr_perm^Tryptophan/tyrosine permease family^39-257^E:1.5e-05",".",".","COG0814^amino acid transport","KEGG:ath:AT5G40780","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015171^molecular_function^amino acid transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0043090^biological_process^amino acid import`GO:0003333^biological_process^amino acid transmembrane transport`GO:0080167^biological_process^response to karrikin","GO:0003333^biological_process^amino acid transmembrane transport",".","."]
["TRINITY_DN4701_c0_g1","roots S.abrotanoides","roots S. yangii",1.55149780038112,"0.00590180344213102","0.0106857367791979","TRINITY_DN4701_c0_g1_i1","Y4885_ARATH^Y4885_ARATH^Q:2121-355,H:70-695^37.58%ID^E:3e-73^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN4701_c0_g1_i1.p1","337-2280[-]","Y4885_ARATH^Y4885_ARATH^Q:54-642,H:70-695^37.58%ID^E:4e-93^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^33-73^E:5.6e-09`PF13855.3^LRR_8^Leucine rich repeat^112-172^E:4.9e-07`PF00560.30^LRR_1^Leucine Rich Repeat^161-180^E:0.28`PF13855.3^LRR_8^Leucine rich repeat^234-293^E:7.3e-07`PF00560.30^LRR_1^Leucine Rich Repeat^234-256^E:0.55`PF00560.30^LRR_1^Leucine Rich Repeat^258-280^E:0.042`PF00560.30^LRR_1^Leucine Rich Repeat^378-399^E:1.2`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^415-424^E:11000`PF13855.3^LRR_8^Leucine rich repeat^424-484^E:6.6e-07`PF00560.30^LRR_1^Leucine Rich Repeat^425-446^E:0.3","sigP:1^21^0.707^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G08850","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN41931_c0_g1","roots S.abrotanoides","roots S. yangii",1.55111272232237,{"v":8796364830.42705,"d":"8.80E+09"},"0.000207987839322131","TRINITY_DN41931_c0_g1_i5","CAP9_ARATH^CAP9_ARATH^Q:1775-330,H:32-499^51.45%ID^E:1e-144^RecName: Full=Putative clathrin assembly protein At1g14910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41931_c0_g1_i5.p1","120-1124[-]","CAP6_ARATH^CAP6_ARATH^Q:1-265,H:256-528^46.64%ID^E:2e-58^RecName: Full=Putative clathrin assembly protein At4g25940;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07651.13^ANTH^ANTH domain^1-60^E:3.8e-13",".",".","ENOG410XQ90^Clathrin assembly protein","KEGG:ath:AT4G25940","GO:0030136^cellular_component^clathrin-coated vesicle`GO:0005905^cellular_component^coated pit`GO:0005794^cellular_component^Golgi apparatus`GO:0005545^molecular_function^1-phosphatidylinositol binding`GO:0048268^biological_process^clathrin coat assembly`GO:0006897^biological_process^endocytosis","GO:0005543^molecular_function^phospholipid binding",".","."]
["TRINITY_DN103039_c0_g1","roots S.abrotanoides","roots S. yangii",1.54304179702043,"0.000675319910350221","0.00142225926095542","TRINITY_DN103039_c0_g1_i2","CDT1A_ARATH^CDT1A_ARATH^Q:63-1688,H:12-543^40.38%ID^E:6e-81^RecName: Full=CDT1-like protein a, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN103039_c0_g1_i2.p1","30-1751[+]","CDT1A_ARATH^CDT1A_ARATH^Q:12-553,H:12-543^40.38%ID^E:2e-93^RecName: Full=CDT1-like protein a, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08839.8^CDT1^DNA replication factor CDT1 like^105-224^E:1.8e-14`PF16679.2^CDT1_C^DNA replication factor Cdt1 C-terminal domain^451-542^E:2.6e-19",".",".","ENOG410XT37^Chromatin licensing and DNA replication factor 1","KEGG:ath:AT2G31270`KO:K10727","GO:0009507^cellular_component^chloroplast`GO:0005634^cellular_component^nucleus`GO:0004693^molecular_function^cyclin-dependent protein serine/threonine kinase activity`GO:0070182^molecular_function^DNA polymerase binding`GO:0019901^molecular_function^protein kinase binding`GO:0007049^biological_process^cell cycle`GO:0009658^biological_process^chloroplast organization`GO:0051276^biological_process^chromosome organization`GO:0006260^biological_process^DNA replication`GO:0048229^biological_process^gametophyte development`GO:0051726^biological_process^regulation of cell cycle",".",".","."]
["TRINITY_DN44144_c5_g2","roots S.abrotanoides","roots S. yangii",1.54106640472257,"0.00393480691622189","0.00735412703118384","TRINITY_DN44144_c5_g2_i1","ADT_PARKE^ADT_PARKE^Q:863-27,H:56-330^46.43%ID^E:2e-79^RecName: Full=ADP,ATP carrier protein;^Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellales incertae sedis; Parachlorella",".","TRINITY_DN44144_c5_g2_i1.p1","21-854[-]","ADT_PARKE^ADT_PARKE^Q:1-276,H:59-330^46.21%ID^E:1e-78^RecName: Full=ADP,ATP carrier protein;^Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellales incertae sedis; Parachlorella","PF00153.24^Mito_carr^Mitochondrial carrier protein^1-76^E:1.5e-12`PF00153.24^Mito_carr^Mitochondrial carrier protein^86-175^E:2.5e-21`PF00153.24^Mito_carr^Mitochondrial carrier protein^185-276^E:1.3e-15",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005215^molecular_function^transporter activity`GO:0055085^biological_process^transmembrane transport",".",".","."]
["TRINITY_DN35647_c0_g1","roots S.abrotanoides","roots S. yangii",1.53624775869893,"0.00240776910545966","0.00465961189746838","TRINITY_DN35647_c0_g1_i2","BRC2B_ARATH^BRC2B_ARATH^Q:818-351,H:996-1147^45.57%ID^E:4e-28^RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B {ECO:0000303|PubMed:16415210};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35647_c0_g1_i2.p1","327-758[-]","BRC2B_ARATH^BRC2B_ARATH^Q:1-136,H:1012-1147^44.93%ID^E:1e-26^RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B {ECO:0000303|PubMed:16415210};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Y06W^Breast cancer 2, early onset","KEGG:ath:AT5G01630`KO:K08775","GO:0005739^cellular_component^mitochondrion`GO:0005634^cellular_component^nucleus`GO:0003697^molecular_function^single-stranded DNA binding`GO:0000724^biological_process^double-strand break repair via homologous recombination`GO:0051321^biological_process^meiotic cell cycle`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN44091_c3_g2","roots S.abrotanoides","roots S. yangii",1.53319628886961,"0.00510764300979662","0.00935636617955337","TRINITY_DN44091_c3_g2_i1","GDL53_ARATH^GDL53_ARATH^Q:1409-267,H:1-380^60.99%ID^E:6e-175^RecName: Full=GDSL esterase/lipase At3g26430;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44091_c3_g2_i1.p1","258-1409[-]","GDL53_ARATH^GDL53_ARATH^Q:1-381,H:1-380^60.99%ID^E:8e-177^RecName: Full=GDSL esterase/lipase At3g26430;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^34-362^E:1.3e-21","sigP:1^25^0.801^YES",".","ENOG410Y9BR^GDSL esterase lipase","KEGG:ath:AT3G26430","GO:0005576^cellular_component^extracellular region`GO:0016298^molecular_function^lipase activity`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN47160_c0_g1","roots S.abrotanoides","roots S. yangii",1.52709972621405,{"v":9190191937.85957,"d":"9.19E+09"},"0.000216859347129241","TRINITY_DN47160_c0_g1_i1","Y5977_ARATH^Y5977_ARATH^Q:3086-444,H:24-911^49.38%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47160_c0_g1_i1.p1","291-3146[-]","Y5977_ARATH^Y5977_ARATH^Q:16-901,H:19-911^49.44%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^90-112^E:0.98`PF00560.30^LRR_1^Leucine Rich Repeat^266-282^E:1.2`PF00069.22^Pkinase^Protein kinase domain^627-892^E:6.5e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^629-892^E:3.5e-47","sigP:1^22^0.869^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G49770","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44548_c0_g3","roots S.abrotanoides","roots S. yangii",1.52494928542806,"0.016116275382116","0.026867831172536","TRINITY_DN44548_c0_g3_i2","FBL42_ARATH^FBL42_ARATH^Q:242-1126,H:50-340^26.86%ID^E:5e-11^RecName: Full=F-box/LRR-repeat protein At3g03360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44548_c0_g3_i2.p1","260-1192[+]","FBL42_ARATH^FBL42_ARATH^Q:2-289,H:57-340^27.48%ID^E:9e-14^RecName: Full=F-box/LRR-repeat protein At3g03360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZQIV^F-box protein","KEGG:ath:AT3G03360",".",".",".","."]
["TRINITY_DN44492_c2_g2","roots S.abrotanoides","roots S. yangii",1.51366716322296,"0.000402623398609825","0.000875940230519125","TRINITY_DN44492_c2_g2_i2","ZHD6_ARATH^ZHD6_ARATH^Q:844-272,H:81-262^55.45%ID^E:2e-51^RecName: Full=Zinc-finger homeodomain protein 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44492_c2_g2_i2.p1","269-1198[-]","ZHD6_ARATH^ZHD6_ARATH^Q:43-309,H:14-262^47.46%ID^E:2e-66^RecName: Full=Zinc-finger homeodomain protein 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04770.9^ZF-HD_dimer^ZF-HD protein dimerisation region^118-170^E:5.1e-30",".",".","ENOG410YKZ6^ZF-HD protein dimerisation region","KEGG:ath:AT2G18350","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45927_c1_g1","roots S.abrotanoides","roots S. yangii",1.51215198049597,"0.00124752465754611","0.00252349862133467","TRINITY_DN45927_c1_g1_i6","PUB33_ARATH^PUB33_ARATH^Q:811-383,H:48-193^26.97%ID^E:7e-09^RecName: Full=U-box domain-containing protein 33;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45927_c1_g1_i6.p1","224-946[-]","PUB33_ARATH^PUB33_ARATH^Q:45-188,H:47-193^25.5%ID^E:5e-10^RecName: Full=U-box domain-containing protein 33;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00582.23^Usp^Universal stress protein family^53-167^E:3.5e-05",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G45910","GO:0005524^molecular_function^ATP binding`GO:0016874^molecular_function^ligase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity","GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN87510_c0_g1","roots S.abrotanoides","roots S. yangii",1.50949540941537,"0.00863321199850415","0.0151682435043831","TRINITY_DN87510_c0_g1_i1","CIPK2_ORYSJ^CIPK2_ORYSJ^Q:401-1654,H:7-430^65.35%ID^E:0^RecName: Full=CBL-interacting protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN87510_c0_g1_i1.p1","389-1678[+]","CIPK2_ORYSJ^CIPK2_ORYSJ^Q:5-422,H:7-430^65.35%ID^E:0^RecName: Full=CBL-interacting protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00069.22^Pkinase^Protein kinase domain^11-265^E:1.6e-73`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^13-261^E:3.6e-39`PF14531.3^Kinase-like^Kinase-like^105-253^E:1.1e-07`PF03822.11^NAF^NAF domain^296-354^E:1.6e-19",".",".","COG0515^Serine Threonine protein kinase","KEGG:osa:4344287","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0007165^biological_process^signal transduction","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation`GO:0007165^biological_process^signal transduction",".","."]
["TRINITY_DN37038_c0_g1","roots S.abrotanoides","roots S. yangii",1.50686655424662,"0.000244164609155396","0.00054595097186387","TRINITY_DN37038_c0_g1_i1","SCRM2_ARATH^SCRM2_ARATH^Q:767-321,H:265-443^28.18%ID^E:3e-11^RecName: Full=Transcription factor SCREAM2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37038_c0_g1_i1.p1","291-854[-]","SCRM2_ARATH^SCRM2_ARATH^Q:30-178,H:265-443^28.18%ID^E:4e-12^RecName: Full=Transcription factor SCREAM2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111GT2^inducer of cbf expression","KEGG:ath:AT1G12860","GO:0005634^cellular_component^nucleus`GO:0016597^molecular_function^amino acid binding`GO:0003677^molecular_function^DNA binding`GO:0007275^biological_process^multicellular organism development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47528_c2_g5","roots S.abrotanoides","roots S. yangii",1.50589639291408,"0.00320555196073526","0.00608466897655597","TRINITY_DN47528_c2_g5_i1","R1A6_SOLDE^R1A6_SOLDE^Q:2350-149,H:523-1240^32.74%ID^E:2e-90^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47528_c2_g5_i1.p1","122-2788[-]","R1A6_SOLDE^R1A6_SOLDE^Q:111-880,H:484-1240^32.36%ID^E:3e-92^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^157-472^E:9.4e-68",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN43961_c1_g1","roots S.abrotanoides","roots S. yangii",1.50012369082311,"0.000402293892760592","0.00087535968052517","TRINITY_DN43961_c1_g1_i2","TBL29_ARATH^TBL29_ARATH^Q:1-609,H:285-487^77.83%ID^E:2e-117^RecName: Full=Protein ESKIMO 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43961_c1_g1_i2.p1","1-612[+]","TBL29_ARATH^TBL29_ARATH^Q:1-203,H:285-487^77.83%ID^E:1e-118^RecName: Full=Protein ESKIMO 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^4-197^E:6e-58",".",".","ENOG410YA1R^expressed protein","KEGG:ath:AT3G55990","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:1990538^molecular_function^xylan O-acetyltransferase activity`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0009409^biological_process^response to cold`GO:0050826^biological_process^response to freezing`GO:0045492^biological_process^xylan biosynthetic process",".",".","."]
["TRINITY_DN47706_c2_g2","roots S.abrotanoides","roots S. yangii",1.4952743346516,"0.00812405020675979","0.0143349596985838","TRINITY_DN47706_c2_g2_i2","Y1130_ARATH^Y1130_ARATH^Q:206-601,H:493-625^66.92%ID^E:1e-53^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47706_c2_g2_i2.p1","2-601[+]","Y1133_ARATH^Y1133_ARATH^Q:69-200,H:508-640^66.92%ID^E:9e-55^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^86-199^E:6.4e-19`PF00069.22^Pkinase^Protein kinase domain^86-199^E:6.1e-16",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G11330","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44132_c1_g4","roots S.abrotanoides","roots S. yangii",1.494850916156,"0.000175364655777957","0.000398784393838357","TRINITY_DN44132_c1_g4_i1","DTX54_ARATH^DTX54_ARATH^Q:685-5,H:1-229^78.17%ID^E:3e-118^RecName: Full=Protein DETOXIFICATION 54 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44132_c1_g4_i1.p1","2-760[-]","DTX54_ARATH^DTX54_ARATH^Q:26-252,H:1-229^78.17%ID^E:6e-119^RecName: Full=Protein DETOXIFICATION 54 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^57-217^E:3.7e-34",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G71870`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0006855^biological_process^drug transmembrane transport","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47440_c0_g1","roots S.abrotanoides","roots S. yangii",1.49093211123315,"0.00406032435859202","0.00756935701250465","TRINITY_DN47440_c0_g1_i1","R1C3_SOLDE^R1C3_SOLDE^Q:1574-3,H:691-1202^31.48%ID^E:3e-57^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47440_c0_g1_i1.p1","300-1577[-]","R1C3_SOLDE^R1C3_SOLDE^Q:2-424,H:691-1099^31.12%ID^E:2e-46^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-106^E:1.1e-23",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45696_c3_g1","roots S.abrotanoides","roots S. yangii",1.49092047220067,"0.00469599148442903","0.00865677232080434","TRINITY_DN45696_c3_g1_i1","USPAL_ARATH^USPAL_ARATH^Q:684-253,H:24-162^26.17%ID^E:2e-08^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45696_c3_g1_i1.p1","244-723[-]","USPAL_ARATH^USPAL_ARATH^Q:14-157,H:24-162^26.17%ID^E:2e-09^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00582.23^Usp^Universal stress protein family^5-157^E:2.7e-31",".",".","ENOG41119AN^Universal stress protein","KEGG:ath:AT3G01520","GO:0005886^cellular_component^plasma membrane`GO:0016208^molecular_function^AMP binding`GO:0006950^biological_process^response to stress","GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN45344_c2_g1","roots S.abrotanoides","roots S. yangii",1.48830310820555,{"v":5801763990.54666,"d":"5.80E+09"},"0.000140510607315476","TRINITY_DN45344_c2_g1_i1","SD11_ARATH^SD11_ARATH^Q:365-3,H:667-788^60.98%ID^E:1e-62^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SD11_ARATH^SD11_ARATH^Q:618-448,H:609-665^80.7%ID^E:1e-62^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45344_c2_g1_i1.p1","3-359[-]","SD11_ARATH^SD11_ARATH^Q:1-119,H:669-788^60.33%ID^E:2e-41^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^1-101^E:2.4e-09",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43490_c2_g1","roots S.abrotanoides","roots S. yangii",1.4880560383159,"0.00313628201397837","0.00596128270425643","TRINITY_DN43490_c2_g1_i1","PSBY_ARATH^PSBY_ARATH^Q:540-217,H:80-187^67.59%ID^E:5e-19^RecName: Full=Photosystem II core complex proteins psbY, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43490_c2_g1_i1.p1","211-774[-]","PSBY_SPIOL^PSBY_SPIOL^Q:11-187,H:11-199^56.41%ID^E:2e-57^RecName: Full=Photosystem II core complex proteins psbY, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF06298.8^PsbY^Photosystem II protein Y (PsbY)^80-112^E:1.7e-14`PF06298.8^PsbY^Photosystem II protein Y (PsbY)^152-184^E:6.4e-11",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0030145^molecular_function^manganese ion binding`GO:0015979^biological_process^photosynthesis","GO:0030145^molecular_function^manganese ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46699_c1_g2","roots S.abrotanoides","roots S. yangii",1.47848035984441,"0.00148777079231574","0.00297458344959528","TRINITY_DN46699_c1_g2_i12","EFR_ARATH^EFR_ARATH^Q:2-1084,H:446-833^37.02%ID^E:2e-59^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:2-496,H:126-316^31.41%ID^E:1e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:2-472,H:374-530^33.76%ID^E:8e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:80-478,H:80-212^36.84%ID^E:3e-17^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:2-478,H:349-508^33.12%ID^E:4e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:2-472,H:78-234^33.76%ID^E:6e-15^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:2-469,H:102-257^29.49%ID^E:2e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:2-472,H:174-361^29.26%ID^E:9e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:137-472,H:75-186^33.93%ID^E:7e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46699_c1_g2_i12.p1","2-1084[+]","EFR_ARATH^EFR_ARATH^Q:1-361,H:446-833^37.79%ID^E:3e-65^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:1-165,H:126-316^31.41%ID^E:9e-19^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:1-157,H:374-530^33.76%ID^E:8e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:27-159,H:80-212^36.84%ID^E:2e-17^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:1-159,H:349-508^33.12%ID^E:5e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:1-157,H:78-234^33.76%ID^E:6e-15^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:1-156,H:102-257^29.49%ID^E:1e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:6-163,H:276-465^27.89%ID^E:4e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:1-157,H:174-361^29.26%ID^E:7e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^21-80^E:2.7e-06`PF12799.4^LRR_4^Leucine Rich repeats (2 copies)^72-108^E:3.3e-06`PF13516.3^LRR_6^Leucine Rich repeat^91-106^E:0.1`PF13855.3^LRR_8^Leucine rich repeat^93-152^E:8.6e-08`PF00560.30^LRR_1^Leucine Rich Repeat^93-114^E:0.029`PF00560.30^LRR_1^Leucine Rich Repeat^118-137^E:1.2`PF00069.22^Pkinase^Protein kinase domain^255-341^E:6.2e-12`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^258-360^E:3e-16",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G20480`KO:K13428","GO:0012505^cellular_component^endomembrane system`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0019199^molecular_function^transmembrane receptor protein kinase activity`GO:0010204^biological_process^defense response signaling pathway, resistance gene-independent`GO:0016045^biological_process^detection of bacterium`GO:0002764^biological_process^immune response-regulating signaling pathway`GO:0009626^biological_process^plant-type hypersensitive response`GO:0010359^biological_process^regulation of anion channel activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN41127_c0_g1","roots S.abrotanoides","roots S. yangii",1.47119601796033,"0.000190085241422652","0.000430263426003753","TRINITY_DN41127_c0_g1_i1","STR17_ARATH^STR17_ARATH^Q:206-586,H:9-145^48.18%ID^E:3e-37^RecName: Full=Rhodanese-like domain-containing protein 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41127_c0_g1_i1.p1","176-610[+]","STR17_ARATH^STR17_ARATH^Q:11-137,H:9-145^48.18%ID^E:1e-38^RecName: Full=Rhodanese-like domain-containing protein 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00581.17^Rhodanese^Rhodanese-like domain^37-131^E:3.3e-12","sigP:1^23^0.825^YES",".","COG0607^Rhodanese domain protein","KEGG:ath:AT2G17850",".",".",".","."]
["TRINITY_DN44455_c0_g3","roots S.abrotanoides","roots S. yangii",1.46693732994922,"0.00805729596993792","0.0142333506161747","TRINITY_DN44455_c0_g3_i1","HSPC2_RICFE^HSPC2_RICFE^Q:374-679,H:50-152^38.83%ID^E:1e-15^RecName: Full=Small heat shock protein C2;^Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group",".","TRINITY_DN44455_c0_g3_i1.p1","2-691[+]","HS177_ORYSJ^HS177_ORYSJ^Q:115-220,H:42-148^42.99%ID^E:1e-18^RecName: Full=17.7 kDa class I heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00011.18^HSP20^Hsp20/alpha crystallin family^128-226^E:2.7e-26`PF04969.13^CS^CS domain^131-213^E:0.085",".",".","COG0071^response to heat","KEGG:osa:4332363`KO:K13993","GO:0005737^cellular_component^cytoplasm`GO:0046685^biological_process^response to arsenic-containing substance`GO:0046686^biological_process^response to cadmium ion`GO:0046688^biological_process^response to copper ion`GO:0045471^biological_process^response to ethanol`GO:0009408^biological_process^response to heat`GO:0042542^biological_process^response to hydrogen peroxide",".",".","."]
["TRINITY_DN38487_c0_g1","roots S.abrotanoides","roots S. yangii",1.44405182142931,"0.00132441724190115","0.0026687972130362","TRINITY_DN38487_c0_g1_i2","Y3210_ARATH^Y3210_ARATH^Q:1856-315,H:23-506^45.54%ID^E:2e-130^RecName: Full=BTB/POZ domain-containing protein At3g22104;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38487_c0_g1_i2.p1","312-1655[-]","Y3210_ARATH^Y3210_ARATH^Q:1-447,H:90-506^44.54%ID^E:8e-116^RecName: Full=BTB/POZ domain-containing protein At3g22104;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03000.11^NPH3^NPH3 family^97-323^E:1.4e-57",".",".","ENOG4111G11^BTB POZ domain-containing protein","KEGG:ath:AT3G22104","GO:0016567^biological_process^protein ubiquitination",".",".","."]
["TRINITY_DN46885_c3_g5","roots S.abrotanoides","roots S. yangii",1.43998127728985,"0.000178026912551385","0.000404575027539507","TRINITY_DN46885_c3_g5_i1","TMK1_ARATH^TMK1_ARATH^Q:377-3115,H:25-942^73.64%ID^E:0^RecName: Full=Receptor protein kinase TMK1 {ECO:0000303|PubMed:1332795};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46885_c3_g5_i1.p1","281-3118[+]","TMK1_ARATH^TMK1_ARATH^Q:33-945,H:25-942^73.75%ID^E:0^RecName: Full=Receptor protein kinase TMK1 {ECO:0000303|PubMed:1332795};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^34-68^E:2.3e-06`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^335-367^E:0.019`PF13855.3^LRR_8^Leucine rich repeat^388-429^E:3.6e-08`PF12799.4^LRR_4^Leucine Rich repeats (2 copies)^393-436^E:1.7e-06`PF00069.22^Pkinase^Protein kinase domain^593-866^E:2.9e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^595-821^E:4.4e-45","sigP:1^30^0.617^YES",".","ENOG41102Z7^receptor protein kinase","KEGG:ath:AT1G66150`KO:K00924","GO:0005576^cellular_component^extracellular region`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004675^molecular_function^transmembrane receptor protein serine/threonine kinase activity`GO:0007165^biological_process^signal transduction`GO:0007178^biological_process^transmembrane receptor protein serine/threonine kinase signaling pathway","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43666_c0_g3","roots S.abrotanoides","roots S. yangii",1.43877664491032,"0.000910310637061216","0.00187767529234663","TRINITY_DN43666_c0_g3_i1","PER72_ARATH^PER72_ARATH^Q:61-1047,H:5-333^65.65%ID^E:3e-159^RecName: Full=Peroxidase 72;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43666_c0_g3_i1.p1","40-1053[+]","PER72_ARATH^PER72_ARATH^Q:4-336,H:6-333^65.37%ID^E:6e-162^RecName: Full=Peroxidase 72;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^53-300^E:5.1e-75","sigP:1^20^0.812^YES",".","ENOG410YA1B^peroxidase","KEGG:ath:AT5G66390`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0009809^biological_process^lignin biosynthetic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46458_c2_g12","roots S.abrotanoides","roots S. yangii",1.43717602893151,"0.000392663652366421","0.000855337577825693","TRINITY_DN46458_c2_g12_i1","E1311_ARATH^E1311_ARATH^Q:1103-141,H:28-350^51.39%ID^E:4e-122^RecName: Full=Glucan endo-1,3-beta-glucosidase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46458_c2_g12_i1.p1","123-1262[-]","E1311_ARATH^E1311_ARATH^Q:54-374,H:28-350^51.39%ID^E:3e-123^RecName: Full=Glucan endo-1,3-beta-glucosidase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^56-371^E:3.3e-83",".",".","ENOG410YA4N^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT1G32860","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005886^cellular_component^plasma membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN46848_c0_g3","roots S.abrotanoides","roots S. yangii",1.43444333468304,"0.00460271250349817","0.00849715163926278","TRINITY_DN46848_c0_g3_i2","CB26_PETSP^CB26_PETSP^Q:960-166,H:1-265^95.09%ID^E:0^RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN46848_c0_g3_i2.p1","163-960[-]","CB26_PETSP^CB26_PETSP^Q:1-265,H:1-265^95.09%ID^E:0^RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^66-231^E:2.2e-50",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0009765^biological_process^photosynthesis, light harvesting`GO:0018298^biological_process^protein-chromophore linkage",".",".","."]
["TRINITY_DN45818_c0_g8","roots S.abrotanoides","roots S. yangii",1.43406719504256,"0.000109783572589978","0.000256455380130139","TRINITY_DN45818_c0_g8_i1","WAKLB_ARATH^WAKLB_ARATH^Q:188-2098,H:35-690^44.78%ID^E:3e-161^RecName: Full=Wall-associated receptor kinase-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45818_c0_g8_i1.p1","2-2257[+]","WAKLB_ARATH^WAKLB_ARATH^Q:63-699,H:35-690^45.06%ID^E:8e-170^RecName: Full=Wall-associated receptor kinase-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13947.3^GUB_WAK_bind^Wall-associated receptor kinase galacturonan-binding^61-161^E:4.4e-22`PF07645.12^EGF_CA^Calcium-binding EGF domain^315-345^E:0.00017`PF00069.22^Pkinase^Protein kinase domain^428-692^E:7.6e-42`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^432-695^E:2e-41",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G16130","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0046777^biological_process^protein autophosphorylation","GO:0030247^molecular_function^polysaccharide binding`GO:0005509^molecular_function^calcium ion binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN37001_c0_g1","roots S.abrotanoides","roots S. yangii",1.43405608230833,"0.00183766405314318","0.00362153839108997","TRINITY_DN37001_c0_g1_i2","MBD7_ARATH^MBD7_ARATH^Q:984-280,H:114-304^33.19%ID^E:1e-24^RecName: Full=Methyl-CpG-binding domain-containing protein 7 {ECO:0000303|PubMed:12954765};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MBD7_ARATH^MBD7_ARATH^Q:1083-409,H:1-206^30.25%ID^E:3e-14^RecName: Full=Methyl-CpG-binding domain-containing protein 7 {ECO:0000303|PubMed:12954765};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37001_c0_g1_i2.p1","247-1083[-]","MBD7_ARATH^MBD7_ARATH^Q:34-268,H:114-304^33.19%ID^E:2e-25^RecName: Full=Methyl-CpG-binding domain-containing protein 7 {ECO:0000303|PubMed:12954765};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MBD7_ARATH^MBD7_ARATH^Q:1-225,H:1-206^30.25%ID^E:4e-15^RecName: Full=Methyl-CpG-binding domain-containing protein 7 {ECO:0000303|PubMed:12954765};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01429.16^MBD^Methyl-CpG binding domain^29-80^E:6e-11`PF01429.16^MBD^Methyl-CpG binding domain^130-176^E:5.2e-08",".",".","ENOG4111HPQ^Methyl-CpG binding domain protein","KEGG:ath:AT5G59800","GO:0010369^cellular_component^chromocenter`GO:0005634^cellular_component^nucleus`GO:0019899^molecular_function^enzyme binding`GO:0008327^molecular_function^methyl-CpG binding`GO:0006346^biological_process^methylation-dependent chromatin silencing`GO:0000122^biological_process^negative regulation of transcription from RNA polymerase II promoter`GO:1901537^biological_process^positive regulation of DNA demethylation`GO:0080167^biological_process^response to karrikin`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN44439_c1_g4","roots S.abrotanoides","roots S. yangii",1.42715774908139,"0.00130227854654737","0.00262702800296585","TRINITY_DN44439_c1_g4_i1","FAS1_ARATH^FAS1_ARATH^Q:1513-2967,H:337-807^48.87%ID^E:9e-99^RecName: Full=Chromatin assembly factor 1 subunit FAS1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FAS1_ARATH^FAS1_ARATH^Q:541-1191,H:20-230^48.17%ID^E:2e-39^RecName: Full=Chromatin assembly factor 1 subunit FAS1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44439_c1_g4_i1.p1","466-3012[+]","FAS1_ARATH^FAS1_ARATH^Q:26-834,H:20-807^50.25%ID^E:0^RecName: Full=Chromatin assembly factor 1 subunit FAS1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12253.5^CAF1A^Chromatin assembly factor 1 subunit A^498-566^E:3.4e-21",".",".","ENOG4111QVP^Chromatin assembly",".","GO:0033186^cellular_component^CAF-1 complex`GO:0005634^cellular_component^nucleus`GO:0042393^molecular_function^histone binding`GO:0008283^biological_process^cell proliferation`GO:0006325^biological_process^chromatin organization`GO:0006310^biological_process^DNA recombination`GO:0006260^biological_process^DNA replication`GO:0000724^biological_process^double-strand break repair via homologous recombination`GO:0031507^biological_process^heterochromatin assembly`GO:0048366^biological_process^leaf development`GO:0006334^biological_process^nucleosome assembly`GO:0009555^biological_process^pollen development`GO:0045787^biological_process^positive regulation of cell cycle`GO:0009934^biological_process^regulation of meristem structural organization`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated`GO:0010026^biological_process^trichome differentiation",".",".","."]
["TRINITY_DN46502_c8_g2","roots S.abrotanoides","roots S. yangii",1.42677152688727,"0.000142372425771548","0.00032797658079667","TRINITY_DN46502_c8_g2_i1","NAC94_ARATH^NAC94_ARATH^Q:1437-916,H:5-203^50.25%ID^E:3e-57^RecName: Full=Putative NAC domain-containing protein 94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46502_c8_g2_i1.p1","355-1464[-]","NAC94_ARATH^NAC94_ARATH^Q:10-183,H:5-203^50.25%ID^E:1e-60^RecName: Full=Putative NAC domain-containing protein 94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^27-151^E:3.5e-25",".",".","ENOG410YHVU^NAC domain-containing protein","KEGG:ath:AT5G39820","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45057_c3_g2","roots S.abrotanoides","roots S. yangii",1.42151199250649,{"v":6397158113.25407,"d":"6.40E+09"},"0.000153969329694575","TRINITY_DN45057_c3_g2_i3","SBS_SOLHA^SBS_SOLHA^Q:357-593,H:265-343^56.96%ID^E:2e-21^RecName: Full=Santalene and bergamotene synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45057_c3_g2_i3.p1","156-596[+]","SBS_SOLHA^SBS_SOLHA^Q:68-147,H:265-344^56.25%ID^E:4e-22^RecName: Full=Santalene and bergamotene synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^47-144^E:2.7e-23",".",".",".","KEGG:ag:ACJ38409`KO:K15798","GO:0009507^cellular_component^chloroplast`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44247_c0_g5","roots S.abrotanoides","roots S. yangii",1.42142982757118,"0.00163018854452103","0.00323962291055919","TRINITY_DN44247_c0_g5_i1","ARFP_ARATH^ARFP_ARATH^Q:816-97,H:1-237^72.95%ID^E:8e-103^RecName: Full=Auxin response factor 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44247_c0_g5_i1.p1","1-816[-]","ARFP_ARATH^ARFP_ARATH^Q:1-240,H:1-237^74.29%ID^E:4e-115^RecName: Full=Auxin response factor 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02362.18^B3^B3 DNA binding domain^124-225^E:4.5e-23",".",".","ENOG410ZZ2C^auxin response factor","KEGG:ath:AT4G30080","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0035198^molecular_function^miRNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0051301^biological_process^cell division`GO:0007389^biological_process^pattern specification process`GO:0009733^biological_process^response to auxin`GO:0048829^biological_process^root cap development`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN27493_c0_g1","roots S.abrotanoides","roots S. yangii",1.4184311486748,"0.0096834096334366","0.0168334566395727","TRINITY_DN27493_c0_g1_i1","MENB_ARATH^MENB_ARATH^Q:1366-386,H:6-337^70.78%ID^E:1e-171^RecName: Full=1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN27493_c0_g1_i1.p1","383-1390[-]","MENB_ARATH^MENB_ARATH^Q:9-335,H:6-337^70.78%ID^E:4e-174^RecName: Full=1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00378.17^ECH_1^Enoyl-CoA hydratase/isomerase^81-329^E:1.9e-74`PF16113.2^ECH_2^Enoyl-CoA hydratase/isomerase^86-262^E:4.5e-20",".",".","COG0447^Naphthoate synthase","KEGG:ath:AT1G60550`KO:K01661","GO:0005777^cellular_component^peroxisome`GO:0008935^molecular_function^1,4-dihydroxy-2-naphthoyl-CoA synthase activity`GO:0016853^molecular_function^isomerase activity`GO:0009234^biological_process^menaquinone biosynthetic process`GO:0042372^biological_process^phylloquinone biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process`GO:0016836^molecular_function^hydro-lyase activity",".","."]
["TRINITY_DN42257_c0_g1","roots S.abrotanoides","roots S. yangii",1.41488625702827,"0.00251177397191537","0.00484779143118652","TRINITY_DN42257_c0_g1_i1","ORC1A_ARATH^ORC1A_ARATH^Q:2291-249,H:133-809^68.12%ID^E:0^RecName: Full=Origin of replication complex subunit 1A {ECO:0000303|PubMed:16179646};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42257_c0_g1_i1.p1","246-2711[-]","ORC1A_ARATH^ORC1A_ARATH^Q:10-821,H:16-809^61.04%ID^E:0^RecName: Full=Origin of replication complex subunit 1A {ECO:0000303|PubMed:16179646};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00628.26^PHD^PHD-finger^171-217^E:6.1e-10`PF01426.15^BAH^BAH domain^251-342^E:1.5e-11`PF13401.3^AAA_22^AAA domain^469-595^E:1e-08`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^471-616^E:3.9e-20",".",".","COG1474^Involved in regulation of DNA replication (By similarity)","KEGG:ath:AT4G14700`KO:K02603","GO:0005634^cellular_component^nucleus`GO:0000808^cellular_component^origin recognition complex`GO:0005524^molecular_function^ATP binding`GO:0003682^molecular_function^chromatin binding`GO:0010385^molecular_function^double-stranded methylated DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0006260^biological_process^DNA replication`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0005515^molecular_function^protein binding`GO:0003682^molecular_function^chromatin binding`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN47674_c1_g5","roots S.abrotanoides","roots S. yangii",1.41380657097028,"0.00458368095575067","0.00846481358788034","TRINITY_DN47674_c1_g5_i1","R1B17_SOLDE^R1B17_SOLDE^Q:862-2,H:563-848^34.83%ID^E:6e-41^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47674_c1_g5_i1.p1","2-844[-]","R1B17_SOLDE^R1B17_SOLDE^Q:1-281,H:569-848^34.51%ID^E:7e-39^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-254^E:5.5e-54",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46042_c0_g5","roots S.abrotanoides","roots S. yangii",1.41350994143713,"0.00616001279283705","0.0111165095552968","TRINITY_DN46042_c0_g5_i1","RAS_MELOI^RAS_MELOI^Q:279-686,H:1-135^67.65%ID^E:1e-57^RecName: Full=Rosmarinate synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Melissa",".","TRINITY_DN46042_c0_g5_i1.p1","279-761[+]","RAS_MELOI^RAS_MELOI^Q:1-136,H:1-135^67.65%ID^E:1e-60^RecName: Full=Rosmarinate synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Melissa","PF02458.12^Transferase^Transferase family^1-137^E:1.2e-27",".",".",".",".","GO:0050266^molecular_function^rosmarinate synthase activity`GO:0008152^biological_process^metabolic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN47330_c1_g1","roots S.abrotanoides","roots S. yangii",1.41110695303018,"0.000438566581329966","0.000948891811130602","TRINITY_DN47330_c1_g1_i1","PLA11_ARATH^PLA11_ARATH^Q:1343-270,H:83-447^65.76%ID^E:2e-169^RecName: Full=Phospholipase A(1) DAD1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47330_c1_g1_i1.p1","255-1526[-]","PLA11_ARATH^PLA11_ARATH^Q:62-419,H:83-447^65.76%ID^E:7e-172^RecName: Full=Phospholipase A(1) DAD1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01764.22^Lipase_3^Lipase (class 3)^190-333^E:4.8e-37",".",".","ENOG4111MQ0^Phospholipase A(1)","KEGG:ath:AT2G44810`KO:K16818","GO:0009507^cellular_component^chloroplast`GO:0052740^molecular_function^1-acyl-2-lysophosphatidylserine acylhydrolase activity`GO:0008970^molecular_function^phosphatidylcholine 1-acylhydrolase activity`GO:0052739^molecular_function^phosphatidylserine 1-acylhydrolase activity`GO:0016042^biological_process^lipid catabolic process","GO:0006629^biological_process^lipid metabolic process",".","."]
["TRINITY_DN43872_c3_g1","roots S.abrotanoides","roots S. yangii",1.40865098342646,"0.000155175146360625","0.000355564110584076","TRINITY_DN43872_c3_g1_i2","SCAM1_ORYSI^SCAM1_ORYSI^Q:172-1023,H:1-288^70.55%ID^E:2e-146^RecName: Full=Putative secretory carrier-associated membrane protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43872_c3_g1_i2.p1","172-1068[+]","SCAM1_ORYSI^SCAM1_ORYSI^Q:1-298,H:1-302^69.61%ID^E:4e-155^RecName: Full=Putative secretory carrier-associated membrane protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF04144.10^SCAMP^SCAMP family^111-283^E:2.1e-52",".",".","ENOG410XSJN^secretory carrier membrane protein",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0030658^cellular_component^transport vesicle membrane`GO:0015031^biological_process^protein transport","GO:0015031^biological_process^protein transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47715_c3_g5","roots S.abrotanoides","roots S. yangii",1.39743918547346,"0.00247974701261708","0.00479028009399431","TRINITY_DN47715_c3_g5_i1","FERON_ARATH^FERON_ARATH^Q:419-24,H:23-163^39.72%ID^E:3e-20^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47715_c3_g5_i1.p1","3-479[-]","FERON_ARATH^FERON_ARATH^Q:21-155,H:23-166^38.89%ID^E:7e-20^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11721.5^Malectin^Di-glucose binding within endoplasmic reticulum^30-132^E:1.9e-07","sigP:1^24^0.889^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G51550","GO:0043680^cellular_component^filiform apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005622^cellular_component^intracellular`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009742^biological_process^brassinosteroid mediated signaling pathway`GO:0050832^biological_process^defense response to fungus`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:0030308^biological_process^negative regulation of cell growth`GO:0010483^biological_process^pollen tube reception`GO:0009791^biological_process^post-embryonic development`GO:0046777^biological_process^protein autophosphorylation`GO:0009741^biological_process^response to brassinosteroid`GO:0009723^biological_process^response to ethylene`GO:0048364^biological_process^root development`GO:0007338^biological_process^single fertilization",".",".","."]
["TRINITY_DN12170_c0_g1","roots S.abrotanoides","roots S. yangii",1.39697674289469,"0.00028364879480598","0.000629702127417281","TRINITY_DN12170_c0_g1_i1","CM1_ARATH^CM1_ARATH^Q:248-1021,H:77-340^71.59%ID^E:2e-124^RecName: Full=Chorismate mutase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN12170_c0_g1_i1.p1","59-1024[+]","CM1_ARATH^CM1_ARATH^Q:64-321,H:77-340^71.59%ID^E:1e-140^RecName: Full=Chorismate mutase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1605^Chorismate mutase","KEGG:ath:AT3G29200`KO:K01850","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0004106^molecular_function^chorismate mutase activity`GO:0016688^molecular_function^L-ascorbate peroxidase activity`GO:0009073^biological_process^aromatic amino acid family biosynthetic process`GO:0098869^biological_process^cellular oxidant detoxification`GO:0046417^biological_process^chorismate metabolic process",".",".","."]
["TRINITY_DN47601_c0_g8","roots S.abrotanoides","roots S. yangii",1.38477315250342,"0.00839495549095362","0.014774719789162","TRINITY_DN47601_c0_g8_i1","R1A6_SOLDE^R1A6_SOLDE^Q:1204-374,H:959-1229^31.63%ID^E:1e-18^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47601_c0_g8_i1.p1","305-1207[-]","R1A6_SOLDE^R1A6_SOLDE^Q:2-278,H:959-1229^31.63%ID^E:4e-19^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN44798_c0_g1","roots S.abrotanoides","roots S. yangii",1.37861306050189,"0.00626194303956576","0.0112844211846828","TRINITY_DN44798_c0_g1_i2","ACAP1_ARATH^ACAP1_ARATH^Q:135-1439,H:1-449^64.44%ID^E:0^RecName: Full=Cyclase-associated protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44798_c0_g1_i2.p1","135-1523[+]","ACAP1_ARATH^ACAP1_ARATH^Q:1-435,H:1-449^64.44%ID^E:0^RecName: Full=Cyclase-associated protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01213.16^CAP_N^Adenylate cyclase associated (CAP) N terminal^4-284^E:1.5e-75`PF08603.8^CAP_C^Adenylate cyclase associated (CAP) C terminal^303-436^E:3.6e-48",".",".","ENOG410XPXJ^adenylyl cyclase-associated protein","KEGG:ath:AT4G34490`KO:K17261","GO:0005829^cellular_component^cytosol`GO:0030036^biological_process^actin cytoskeleton organization`GO:0009826^biological_process^unidimensional cell growth","GO:0003779^molecular_function^actin binding`GO:0007010^biological_process^cytoskeleton organization",".","."]
["TRINITY_DN91654_c0_g1","roots S.abrotanoides","roots S. yangii",1.37730699215005,"0.000245833707439144","0.00054946321250757","TRINITY_DN91654_c0_g1_i1","OFP8_ARATH^OFP8_ARATH^Q:268-77,H:157-220^70.31%ID^E:8e-23^RecName: Full=Transcription repressor OFP8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN91654_c0_g1_i1.p1","59-691[-]","OFP8_ARATH^OFP8_ARATH^Q:3-205,H:2-220^35.78%ID^E:5e-26^RecName: Full=Transcription repressor OFP8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04844.10^Ovate^Transcriptional repressor, ovate^147-203^E:2.6e-24",".",".","ENOG410YX1Q^Pfam:DUF623","KEGG:ath:AT5G19650","GO:0005634^cellular_component^nucleus`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN39493_c2_g1","roots S.abrotanoides","roots S. yangii",1.37449170818483,"0.00143011554393153","0.00286834099583597","TRINITY_DN39493_c2_g1_i1","PUB24_ARATH^PUB24_ARATH^Q:92-1258,H:6-441^36.96%ID^E:6e-73^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39493_c2_g1_i1.p1","89-1282[+]","PUB24_ARATH^PUB24_ARATH^Q:2-394,H:6-445^38.88%ID^E:9e-92^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^6-77^E:2.9e-19",".",".","ENOG410Y8GW^Ubiquitin-protein ligase","KEGG:ath:AT3G11840","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0006952^biological_process^defense response","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN43575_c1_g3","roots S.abrotanoides","roots S. yangii",1.35979253654261,"0.000661606821461917","0.00139550068225979","TRINITY_DN43575_c1_g3_i3","CBR1_MOUSE^CBR1_MOUSE^Q:247-804,H:88-272^36.08%ID^E:6e-29^RecName: Full=Carbonyl reductase [NADPH] 1;^Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus",".","TRINITY_DN43575_c1_g3_i3.p1","343-837[+]","SDR1_ARATH^SDR1_ARATH^Q:1-164,H:143-296^40%ID^E:8e-27^RecName: Full=(+)-neomenthol dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00106.22^adh_short^short chain dehydrogenase^80-126^E:8.2e-06",".",".","COG1028^Dehydrogenase reductase",".","GO:0047501^molecular_function^(+)-neomenthol dehydrogenase activity`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN36512_c0_g2","roots S.abrotanoides","roots S. yangii",1.35695433432555,"0.0008257635008276","0.00171403743976109","TRINITY_DN36512_c0_g2_i1","STY17_ARATH^STY17_ARATH^Q:239-1198,H:241-544^37.04%ID^E:2e-46^RecName: Full=Serine/threonine-protein kinase STY17 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36512_c0_g2_i1.p1","395-1225[+]","STY17_ARATH^STY17_ARATH^Q:6-268,H:299-544^40.91%ID^E:4e-50^RecName: Full=Serine/threonine-protein kinase STY17 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^7-262^E:1.2e-44`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^7-264^E:8.3e-43",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G35780","GO:0005829^cellular_component^cytosol`GO:0016597^molecular_function^amino acid binding`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0004712^molecular_function^protein serine/threonine/tyrosine kinase activity`GO:0004713^molecular_function^protein tyrosine kinase activity`GO:0009658^biological_process^chloroplast organization","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46360_c1_g9","roots S.abrotanoides","roots S. yangii",1.35430293270203,"0.00860537821142283","0.0151221932456205","TRINITY_DN46360_c1_g9_i1","CLPB1_ARATH^CLPB1_ARATH^Q:2419-1541,H:6-284^25.42%ID^E:1e-14^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46360_c1_g9_i1.p1","44-2452[-]","CLPB1_ARATH^CLPB1_ARATH^Q:20-304,H:14-284^26.12%ID^E:3e-19^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02861.17^Clp_N^Clp amino terminal domain, pathogenicity island component^23-54^E:0.00052`PF02861.17^Clp_N^Clp amino terminal domain, pathogenicity island component^132-166^E:0.94",".",".","COG0542^ATP-dependent CLP protease ATP-binding subunit","KEGG:ath:AT1G74310`KO:K03695","GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0045727^biological_process^positive regulation of translation`GO:0019538^biological_process^protein metabolic process`GO:0043335^biological_process^protein unfolding`GO:0009408^biological_process^response to heat`GO:0009644^biological_process^response to high light intensity`GO:0042542^biological_process^response to hydrogen peroxide","GO:0019538^biological_process^protein metabolic process",".","."]
["TRINITY_DN42948_c0_g1","roots S.abrotanoides","roots S. yangii",1.35017032217917,"0.00890098979971369","0.0155955700754876","TRINITY_DN42948_c0_g1_i5","POLX_TOBAC^POLX_TOBAC^Q:1-354,H:594-706^37.29%ID^E:3e-18^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN42948_c0_g1_i5.p1","1-468[+]","POLX_TOBAC^POLX_TOBAC^Q:1-118,H:594-706^37.29%ID^E:3e-18^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration",".",".","."]
["TRINITY_DN43820_c0_g1","roots S.abrotanoides","roots S. yangii",1.34960802049787,{"v":6505278637.92726,"d":"6.51E+09"},"0.000156423399674979","TRINITY_DN43820_c0_g1_i2","C7A12_PANGI^C7A12_PANGI^Q:1534-191,H:49-500^47.38%ID^E:4e-135^RecName: Full=Cytochrome P450 CYP736A12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN43820_c0_g1_i2.p1","182-1675[-]","C7A12_PANGI^C7A12_PANGI^Q:31-495,H:32-500^48.42%ID^E:5e-159^RecName: Full=Cytochrome P450 CYP736A12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^33-476^E:3.7e-101","sigP:1^19^0.726^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN40560_c0_g1","roots S.abrotanoides","roots S. yangii",1.34868542777153,"0.000200399648098473","0.00045225479101199","TRINITY_DN40560_c0_g1_i3","MND1_ARATH^MND1_ARATH^Q:972-319,H:1-217^74.31%ID^E:4e-89^RecName: Full=Meiotic nuclear division protein 1 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40560_c0_g1_i3.p1","292-972[-]","MND1_ARATH^MND1_ARATH^Q:1-218,H:1-217^74.31%ID^E:3e-114^RecName: Full=Meiotic nuclear division protein 1 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03962.12^Mnd1^Mnd1 family^16-204^E:8.6e-60",".",".","COG5124^meiotic nuclear divisions 1 homolog (S. cerevisiae)","KEGG:ath:AT4G29170","GO:0005730^cellular_component^nucleolus`GO:0006310^biological_process^DNA recombination`GO:0006302^biological_process^double-strand break repair`GO:0009553^biological_process^embryo sac development`GO:0051321^biological_process^meiotic cell cycle`GO:0009555^biological_process^pollen development`GO:0010212^biological_process^response to ionizing radiation",".",".","."]
["TRINITY_DN46358_c2_g1","roots S.abrotanoides","roots S. yangii",1.33976147161233,{"v":8495968346.09802,"d":"8.50E+09"},"0.000201396327783427","TRINITY_DN46358_c2_g1_i4","E13G_TOBAC^E13G_TOBAC^Q:1096-125,H:20-342^51.8%ID^E:5e-102^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46358_c2_g1_i4.p1","113-1147[-]","E13G_TOBAC^E13G_TOBAC^Q:18-341,H:20-342^54.79%ID^E:2e-118^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^26-341^E:2.2e-116","sigP:1^17^0.911^YES",".",".",".","GO:0005615^cellular_component^extracellular space`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45649_c7_g2","roots S.abrotanoides","roots S. yangii",1.3374918080017,"0.000440660664920654","0.000953053613944422","TRINITY_DN45649_c7_g2_i1","Y4729_ARATH^Y4729_ARATH^Q:293-1162,H:34-330^45.79%ID^E:8e-86^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45649_c7_g2_i1.p1","188-1162[+]","Y4729_ARATH^Y4729_ARATH^Q:11-325,H:9-330^43.48%ID^E:1e-89^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^73-178^E:9.3e-33`PF00954.17^S_locus_glycop^S-locus glycoprotein domain^209-315^E:2.2e-20","sigP:1^24^0.782^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27290","GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen",".","."]
["TRINITY_DN44579_c6_g4","roots S.abrotanoides","roots S. yangii",1.33430945661545,"0.000134141922127036","0.0003100644809854","TRINITY_DN44579_c6_g4_i2","PHT14_ARATH^PHT14_ARATH^Q:54-815,H:259-511^81.1%ID^E:2e-113^RecName: Full=Inorganic phosphate transporter 1-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44579_c6_g4_i2.p1","285-899[+]","PHT17_ARATH^PHT17_ARATH^Q:1-188,H:331-518^82.45%ID^E:2e-108^RecName: Full=Probable inorganic phosphate transporter 1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^26-181^E:8.6e-19",".",".","ENOG410ZVN7^phosphate transporter","KEGG:ath:AT3G54700`KO:K08176","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:1901683^molecular_function^arsenate ion transmembrane transporter activity`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:1901684^biological_process^arsenate ion transmembrane transport`GO:0006817^biological_process^phosphate ion transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47560_c8_g1","roots S.abrotanoides","roots S. yangii",1.33220992863069,"0.000499340119637997","0.0010715869648852","TRINITY_DN47560_c8_g1_i1","ACT10_SOLTU^ACT10_SOLTU^Q:1-414,H:32-169^94.93%ID^E:2e-95^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47560_c8_g1_i1.p1","1-414[+]","ACT10_SOLTU^ACT10_SOLTU^Q:1-138,H:32-169^94.93%ID^E:2e-95^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00022.16^Actin^Actin^3-138^E:2e-56",".",".","COG5277^Actin-related protein",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN44906_c3_g3","roots S.abrotanoides","roots S. yangii",1.32943575719694,"0.00138169692914422","0.00277561247373777","TRINITY_DN44906_c3_g3_i7","RD21A_ARATH^RD21A_ARATH^Q:315-1,H:243-350^56.48%ID^E:1e-36^RecName: Full=Cysteine proteinase RD21a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44906_c3_g3_i7.p1","1-324[-]","RD21A_ARATH^RD21A_ARATH^Q:4-108,H:243-350^56.48%ID^E:1e-36^RecName: Full=Cysteine proteinase RD21a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00112.20^Peptidase_C1^Papain family cysteine protease^3-107^E:3.1e-37",".",".","COG4870^cathepsin","KEGG:ath:AT1G47128","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0005615^cellular_component^extracellular space`GO:0005764^cellular_component^lysosome`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0008233^molecular_function^peptidase activity`GO:0050832^biological_process^defense response to fungus`GO:0006508^biological_process^proteolysis`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN31440_c0_g1","roots S.abrotanoides","roots S. yangii",1.32872439072715,"0.000939956541632052","0.00193468329500856","TRINITY_DN31440_c0_g1_i3","Y3623_ARATH^Y3623_ARATH^Q:129-749,H:74-280^51.21%ID^E:3e-53^RecName: Full=BTB/POZ domain-containing protein At3g56230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN31440_c0_g1_i3.p1","3-749[+]","Y3623_ARATH^Y3623_ARATH^Q:46-249,H:77-280^51.96%ID^E:2e-73^RecName: Full=BTB/POZ domain-containing protein At3g56230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00651.28^BTB^BTB/POZ domain^75-179^E:2.8e-18",".",".","ENOG410XQV8^meprin and TRAF homology domain-containing protein MATH domain-containing protein","KEGG:ath:AT3G56230`KO:K10523","GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46591_c0_g1","roots S.abrotanoides","roots S. yangii",1.32844354046102,"0.00624129006946617","0.0112501055306725","TRINITY_DN46591_c0_g1_i1","VQ11_ARATH^VQ11_ARATH^Q:137-565,H:13-162^46.91%ID^E:7e-27^RecName: Full=VQ motif-containing protein 11 {ECO:0000303|PubMed:22535423};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46591_c0_g1_i1.p1","65-577[+]","VQ11_ARATH^VQ11_ARATH^Q:25-167,H:13-162^46.91%ID^E:6e-28^RecName: Full=VQ motif-containing protein 11 {ECO:0000303|PubMed:22535423};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05678.11^VQ^VQ motif^24-49^E:1.6e-12",".",".","ENOG410YVV0^VQ motif-containing protein","KEGG:ath:AT1G80450","GO:0005634^cellular_component^nucleus",".",".","."]
["TRINITY_DN46705_c1_g1","roots S.abrotanoides","roots S. yangii",1.32636463555348,"0.00042643898966367","0.000923940121758111","TRINITY_DN46705_c1_g1_i1","CXE18_ARATH^CXE18_ARATH^Q:140-1105,H:8-326^48.3%ID^E:2e-100^RecName: Full=Probable carboxylesterase 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46705_c1_g1_i1.p1","128-1117[+]","CXE18_ARATH^CXE18_ARATH^Q:5-326,H:8-326^50.31%ID^E:2e-108^RecName: Full=Probable carboxylesterase 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00135.25^COesterase^Carboxylesterase family^54-129^E:8.6e-07`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^87-307^E:6.2e-61",".",".","COG0657^alpha beta hydrolase fold-3 domain protein","KEGG:ath:AT5G23530","GO:0052689^molecular_function^carboxylic ester hydrolase activity`GO:0009860^biological_process^pollen tube growth","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45844_c0_g1","roots S.abrotanoides","roots S. yangii",1.32414422749881,"0.00157528016632646","0.0031385412954455","TRINITY_DN45844_c0_g1_i3","ORTH2_ARATH^ORTH2_ARATH^Q:2131-782,H:6-467^60.48%ID^E:0^RecName: Full=E3 ubiquitin-protein ligase ORTHRUS 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ORTH2_ARATH^ORTH2_ARATH^Q:782-396,H:516-631^50.39%ID^E:2e-28^RecName: Full=E3 ubiquitin-protein ligase ORTHRUS 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45844_c0_g1_i3.p1","755-2149[-]","ORTH2_ARATH^ORTH2_ARATH^Q:7-456,H:6-467^60.48%ID^E:0^RecName: Full=E3 ubiquitin-protein ligase ORTHRUS 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13920.3^zf-C3HC4_3^Zinc finger, C3HC4 type (RING finger)^133-178^E:5e-09`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^135-173^E:2.9e-08`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^135-173^E:9e-06`PF02182.14^SAD_SRA^SAD/SRA domain^267-414^E:1e-47",".",".","COG3440^ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase","KEGG:ath:AT1G57820`KO:K10638","GO:0010369^cellular_component^chromocenter`GO:0005720^cellular_component^nuclear heterochromatin`GO:0005634^cellular_component^nucleus`GO:0003682^molecular_function^chromatin binding`GO:0010385^molecular_function^double-stranded methylated DNA binding`GO:0042393^molecular_function^histone binding`GO:0016874^molecular_function^ligase activity`GO:0008327^molecular_function^methyl-CpG binding`GO:0010428^molecular_function^methyl-CpNpG binding`GO:0010429^molecular_function^methyl-CpNpN binding`GO:0061630^molecular_function^ubiquitin protein ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0051301^biological_process^cell division`GO:0032776^biological_process^DNA methylation on cytosine`GO:0010424^biological_process^DNA methylation on cytosine within a CG sequence`GO:0010216^biological_process^maintenance of DNA methylation`GO:0031508^biological_process^pericentric heterochromatin assembly`GO:0090309^biological_process^positive regulation of methylation-dependent chromatin silencing`GO:0016567^biological_process^protein ubiquitination","GO:0046872^molecular_function^metal ion binding`GO:0042393^molecular_function^histone binding",".","."]
["TRINITY_DN45824_c0_g2","roots S.abrotanoides","roots S. yangii",1.32040654054203,"0.000306722482290971","0.000677587988432323","TRINITY_DN45824_c0_g2_i2","DMR6_ARATH^DMR6_ARATH^Q:175-735,H:149-338^65.79%ID^E:3e-88^RecName: Full=Protein DOWNY MILDEW RESISTANCE 6 {ECO:0000303|PubMed:15986928};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45824_c0_g2_i2.p1","199-747[+]","DMR6_ARATH^DMR6_ARATH^Q:2-179,H:158-338^65.75%ID^E:3e-87^RecName: Full=Protein DOWNY MILDEW RESISTANCE 6 {ECO:0000303|PubMed:15986928};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^34-132^E:4e-32",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT5G24530","GO:0046872^molecular_function^metal ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0009617^biological_process^response to bacterium`GO:0009620^biological_process^response to fungus","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46649_c0_g8","roots S.abrotanoides","roots S. yangii",1.31929547704652,"0.00117249507548363","0.00238034475798068","TRINITY_DN46649_c0_g8_i3","SD11_ARATH^SD11_ARATH^Q:32-505,H:481-609^55.06%ID^E:9e-46^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SD11_ARATH^SD11_ARATH^Q:502-555,H:609-626^94.44%ID^E:9e-46^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46649_c0_g8_i3.p1","2-421[+]","B120_ARATH^B120_ARATH^Q:13-118,H:512-617^67.92%ID^E:4e-41^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase B120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^32-116^E:2e-16`PF00069.22^Pkinase^Protein kinase domain^32-126^E:3.4e-15",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G21390","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006952^biological_process^defense response`GO:0006468^biological_process^protein phosphorylation`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46920_c3_g2","roots S.abrotanoides","roots S. yangii",1.31508878596701,{"v":5506609682.68769,"d":"5.51E+09"},"0.000133849657367531","TRINITY_DN46920_c3_g2_i2","RP8L4_ARATH^RP8L4_ARATH^Q:566-99,H:193-362^33.92%ID^E:4e-17^RecName: Full=Probable disease resistance RPP8-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46920_c3_g2_i2.p1","24-566[-]","DRL4_ARATH^DRL4_ARATH^Q:1-177,H:193-388^34.69%ID^E:4e-20^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^1-174^E:4.6e-37",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G50180","GO:0009506^cellular_component^plasmodesma`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN39365_c0_g1","roots S.abrotanoides","roots S. yangii",1.31332064270378,"0.00661236908424705","0.0118577886260796","TRINITY_DN39365_c0_g1_i2","NAT1_ARATH^NAT1_ARATH^Q:1051-110,H:24-330^81.53%ID^E:0^RecName: Full=Nucleobase-ascorbate transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NAT1_ARATH^NAT1_ARATH^Q:1073-999,H:1-25^88%ID^E:5e-07^RecName: Full=Nucleobase-ascorbate transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39365_c0_g1_i2.p1","38-967[-]","NAT1_ARATH^NAT1_ARATH^Q:2-296,H:46-340^86.1%ID^E:0^RecName: Full=Nucleobase-ascorbate transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00860.17^Xan_ur_permease^Permease family^4-296^E:1.1e-37",".",".","COG2233^permease","KEGG:ath:AT2G05760","GO:0016021^cellular_component^integral component of membrane`GO:0009506^cellular_component^plasmodesma`GO:0005215^molecular_function^transporter activity`GO:0055085^biological_process^transmembrane transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN15092_c0_g1","roots S.abrotanoides","roots S. yangii",1.30862038982075,{"v":6205823036.33754,"d":"6.21E+09"},"0.000149712399808589","TRINITY_DN15092_c0_g1_i1","PER1_ARAHY^PER1_ARAHY^Q:164-1033,H:27-316^70.34%ID^E:6e-141^RecName: Full=Cationic peroxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis",".","TRINITY_DN15092_c0_g1_i1.p1","2-1036[+]","PER1_ARAHY^PER1_ARAHY^Q:38-344,H:11-316^69.06%ID^E:1e-152^RecName: Full=Cationic peroxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis","PF00141.20^peroxidase^Peroxidase^69-308^E:1.9e-80",".",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47351_c0_g1","roots S.abrotanoides","roots S. yangii",1.30369432589028,"0.0026746094830959","0.00514323906174691","TRINITY_DN47351_c0_g1_i1","U74E2_ARATH^U74E2_ARATH^Q:1094-483,H:9-213^38.46%ID^E:6e-33^RecName: Full=UDP-glycosyltransferase 74E2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47351_c0_g1_i1.p1","399-1121[-]","U74E2_ARATH^U74E2_ARATH^Q:10-213,H:9-213^38.94%ID^E:3e-37^RecName: Full=UDP-glycosyltransferase 74E2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1819^Transferase","KEGG:ath:AT1G05680","GO:0043231^cellular_component^intracellular membrane-bounded organelle`GO:0052638^molecular_function^indole-3-butyrate beta-glucosyltransferase activity`GO:0080043^molecular_function^quercetin 3-O-glucosyltransferase activity`GO:0080044^molecular_function^quercetin 7-O-glucosyltransferase activity`GO:0035251^molecular_function^UDP-glucosyltransferase activity`GO:0071475^biological_process^cellular hyperosmotic salinity response`GO:0071215^biological_process^cellular response to abscisic acid stimulus`GO:0070301^biological_process^cellular response to hydrogen peroxide`GO:0042631^biological_process^cellular response to water deprivation`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0052696^biological_process^flavonoid glucuronidation`GO:0080024^biological_process^indolebutyric acid metabolic process`GO:0080167^biological_process^response to karrikin`GO:0010016^biological_process^shoot system morphogenesis",".",".","."]
["TRINITY_DN46991_c2_g4","roots S.abrotanoides","roots S. yangii",1.30245926348684,{"v":774724832.27549,"d":"7.75E+08"},"0.000184697837360149","TRINITY_DN46991_c2_g4_i1","C7A29_PANGI^C7A29_PANGI^Q:218-712,H:1-165^50.6%ID^E:2e-47^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax`C7A29_PANGI^C7A29_PANGI^Q:879-1085,H:161-229^59.42%ID^E:2e-19^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN46991_c2_g4_i1.p1","218-757[+]","C7A29_PANGI^C7A29_PANGI^Q:1-176,H:1-176^48.59%ID^E:7e-50^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^80-164^E:1.7e-09",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN80381_c0_g1","roots S.abrotanoides","roots S. yangii",1.29993263749238,"0.0118254405105026","0.0202385540428735","TRINITY_DN80381_c0_g1_i1","SRC2_ARATH^SRC2_ARATH^Q:19-321,H:1-104^35.58%ID^E:8e-13^RecName: Full=Protein SRC2 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN80381_c0_g1_i1.p1","1-483[+]","SRC2_ARATH^SRC2_ARATH^Q:7-107,H:1-104^35.58%ID^E:1e-13^RecName: Full=Protein SRC2 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^11-110^E:2e-10",".",".","ENOG410YJ7V^C2 domain","KEGG:ath:AT1G09070","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0000326^cellular_component^protein storage vacuole`GO:0032586^cellular_component^protein storage vacuole membrane`GO:0006623^biological_process^protein targeting to vacuole","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN39268_c0_g1","roots S.abrotanoides","roots S. yangii",1.29742368417932,"0.00881772470102524","0.0154604890651728","TRINITY_DN39268_c0_g1_i1","UBP20_ARATH^UBP20_ARATH^Q:505-1617,H:174-532^45.87%ID^E:2e-96^RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39268_c0_g1_i1.p1","223-2112[+]","UBP20_ARATH^UBP20_ARATH^Q:95-456,H:174-536^46.03%ID^E:2e-98^RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13423.3^UCH_1^Ubiquitin carboxyl-terminal hydrolase^97-388^E:2.3e-25`PF00443.26^UCH^Ubiquitin carboxyl-terminal hydrolase^98-406^E:1.7e-54",".",".","ENOG410XQ92^ubiquitin carboxyl-terminal hydrolase","KEGG:ath:AT4G17895`KO:K11855","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0036459^molecular_function^thiol-dependent ubiquitinyl hydrolase activity`GO:0016579^biological_process^protein deubiquitination`GO:0006511^biological_process^ubiquitin-dependent protein catabolic process","GO:0036459^molecular_function^thiol-dependent ubiquitinyl hydrolase activity`GO:0016579^biological_process^protein deubiquitination",".","."]
["TRINITY_DN24701_c0_g1","roots S.abrotanoides","roots S. yangii",1.2945699939333,"0.000363795816672586","0.000795618261869813","TRINITY_DN24701_c0_g1_i1","PUB21_ARATH^PUB21_ARATH^Q:1459-233,H:22-434^44.93%ID^E:7e-106^RecName: Full=U-box domain-containing protein 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN24701_c0_g1_i1.p1","227-1528[-]","PUB21_ARATH^PUB21_ARATH^Q:1-432,H:1-434^44.16%ID^E:7e-120^RecName: Full=U-box domain-containing protein 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^33-104^E:1.6e-21",".",".","ENOG410Y3P9^Ubox domain-containing protein","KEGG:ath:AT5G37490","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010200^biological_process^response to chitin","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN37969_c0_g1","roots S.abrotanoides","roots S. yangii",1.28875208152763,{"v":691024189.14015,"d":"6.91E+08"},"0.000165590967999699","TRINITY_DN37969_c0_g1_i1","FBK50_ARATH^FBK50_ARATH^Q:303-1331,H:36-420^30.5%ID^E:5e-37^RecName: Full=F-box/kelch-repeat protein At3g06240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37969_c0_g1_i1.p1","288-1358[+]","FBK50_ARATH^FBK50_ARATH^Q:6-348,H:36-420^30.5%ID^E:2e-38^RecName: Full=F-box/kelch-repeat protein At3g06240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^4-42^E:3.6e-08`PF12937.4^F-box-like^F-box-like^5-41^E:1e-06`PF07734.10^FBA_1^F-box associated^198-289^E:3.3e-07`PF08268.9^FBA_3^F-box associated domain^198-284^E:0.00016",".",".","ENOG410ZSG0^FBOX","KEGG:ath:AT3G06240",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45160_c5_g2","roots S.abrotanoides","roots S. yangii",1.27667203814879,"0.00295351985068866","0.00563883144161884","TRINITY_DN45160_c5_g2_i1","GATA7_ARATH^GATA7_ARATH^Q:1062-349,H:10-231^42.62%ID^E:8e-43^RecName: Full=GATA transcription factor 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45160_c5_g2_i1.p1","298-1140[-]","GATA5_ARATH^GATA5_ARATH^Q:77-279,H:94-332^49.59%ID^E:9e-58^RecName: Full=GATA transcription factor 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00320.24^GATA^GATA zinc finger^199-233^E:1.3e-17",".",".","COG5641^Transcription factor","KEGG:ath:AT5G66320","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003682^molecular_function^chromatin binding`GO:0000977^molecular_function^RNA polymerase II regulatory region sequence-specific DNA binding`GO:0001085^molecular_function^RNA polymerase II transcription factor binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0001228^molecular_function^transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding`GO:0008270^molecular_function^zinc ion binding`GO:0030154^biological_process^cell differentiation`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0006366^biological_process^transcription from RNA polymerase II promoter","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47590_c0_g3","roots S.abrotanoides","roots S. yangii",1.27666434154917,"0.00444944217410117","0.00824033033648578","TRINITY_DN47590_c0_g3_i1","Y4374_ARATH^Y4374_ARATH^Q:586-2343,H:29-634^62.42%ID^E:0^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47590_c0_g3_i1.p1","487-2355[+]","Y4374_ARATH^Y4374_ARATH^Q:34-619,H:29-634^63.3%ID^E:0^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^32-70^E:1.9e-07`PF00560.30^LRR_1^Leucine Rich Repeat^194-215^E:0.44`PF00069.22^Pkinase^Protein kinase domain^337-600^E:1.1e-33`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^338-602^E:1.8e-31","sigP:1^27^0.637^YES",".","ENOG410YDXU^Leucine rich repeat N-terminal domain","KEGG:ath:AT4G23740","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45001_c2_g10","roots S.abrotanoides","roots S. yangii",1.26947708445107,"0.00241383218937484","0.00467102189925358","TRINITY_DN45001_c2_g10_i1","SHR_ARATH^SHR_ARATH^Q:1623-187,H:1-531^56.82%ID^E:0^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45001_c2_g10_i1.p2","184-1623[-]","SHR_ARATH^SHR_ARATH^Q:1-479,H:1-531^56.45%ID^E:0^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03514.11^GRAS^GRAS domain family^96-477^E:4e-98",".",".","ENOG41116YR^Transcription factor","KEGG:ath:AT4G37650","GO:0005769^cellular_component^early endosome`GO:0005770^cellular_component^late endosome`GO:0005634^cellular_component^nucleus`GO:0055037^cellular_component^recycling endosome`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008356^biological_process^asymmetric cell division`GO:0055072^biological_process^iron ion homeostasis`GO:0048366^biological_process^leaf development`GO:0045930^biological_process^negative regulation of mitotic cell cycle`GO:0009956^biological_process^radial pattern formation`GO:0032350^biological_process^regulation of hormone metabolic process`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45727_c1_g1","roots S.abrotanoides","roots S. yangii",1.26824779500339,"0.0133918024906848","0.022694101976724","TRINITY_DN45727_c1_g1_i6","ACA9_ARATH^ACA9_ARATH^Q:3440-228,H:18-1086^71.46%ID^E:0^RecName: Full=Calcium-transporting ATPase 9, plasma membrane-type;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45727_c1_g1_i6.p1","219-3467[-]","ACA9_ARATH^ACA9_ARATH^Q:10-1080,H:18-1086^71.64%ID^E:0^RecName: Full=Calcium-transporting ATPase 9, plasma membrane-type;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12515.5^CaATP_NAI^Ca2+-ATPase N terminal autoinhibitory domain^35-78^E:4.7e-16`PF00690.23^Cation_ATPase_N^Cation transporter/ATPase, N-terminus^145-212^E:2.6e-12`PF00122.17^E1-E2_ATPase^E1-E2 ATPase^232-478^E:7.8e-43`PF00702.23^Hydrolase^haloacid dehalogenase-like hydrolase^484-808^E:2.3e-18`PF13246.3^Cation_ATPase^Cation transport ATPase (P-type)^543-621^E:4.5e-13`PF00689.18^Cation_ATPase_C^Cation transporting ATPase, C-terminus^879-1055^E:4.1e-44",".",".","ENOG410XNNC^ATPase, Ca transporting, plasma membrane","KEGG:ath:AT3G21180`KO:K01537","GO:0005887^cellular_component^integral component of plasma membrane`GO:0043231^cellular_component^intracellular membrane-bounded organelle`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005388^molecular_function^calcium-transporting ATPase activity`GO:0005516^molecular_function^calmodulin binding`GO:0046872^molecular_function^metal ion binding`GO:0009555^biological_process^pollen development`GO:0007338^biological_process^single fertilization","GO:0005516^molecular_function^calmodulin binding`GO:0000166^molecular_function^nucleotide binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN44024_c3_g4","roots S.abrotanoides","roots S. yangii",1.26543987283844,"0.00588416003484304","0.0106558633439335","TRINITY_DN44024_c3_g4_i2","R1B8_SOLDE^R1B8_SOLDE^Q:2051-219,H:561-1172^35.59%ID^E:1e-77^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44024_c3_g4_i2.p1","195-1892[-]","R1B8_SOLDE^R1B8_SOLDE^Q:1-558,H:614-1172^34.42%ID^E:1e-71^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^2-127^E:2e-28",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN42655_c0_g1","roots S.abrotanoides","roots S. yangii",1.25507745432964,"0.000469492599382132","0.00101141809709608","TRINITY_DN42655_c0_g1_i3","C90D1_ARATH^C90D1_ARATH^Q:3-986,H:161-490^64.65%ID^E:2e-140^RecName: Full=3-epi-6-deoxocathasterone 23-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42655_c0_g1_i3.p1","3-1001[+]","C90D1_ARATH^C90D1_ARATH^Q:1-328,H:161-490^64.65%ID^E:5e-158^RecName: Full=3-epi-6-deoxocathasterone 23-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^57-310^E:2.4e-43",".",".","COG2124^Cytochrome p450","KEGG:ath:AT3G13730`KO:K12638","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0010268^biological_process^brassinosteroid homeostasis`GO:0048366^biological_process^leaf development`GO:0048441^biological_process^petal development`GO:0048443^biological_process^stamen development`GO:0016125^biological_process^sterol metabolic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN37939_c0_g1","roots S.abrotanoides","roots S. yangii",1.25465607879978,"0.00132765676198658","0.00267474638306056","TRINITY_DN37939_c0_g1_i2","TMK2_ARATH^TMK2_ARATH^Q:2784-415,H:98-886^47.03%ID^E:0^RecName: Full=Receptor-like kinase TMK2 {ECO:0000303|PubMed:23613767};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37939_c0_g1_i2.p1","412-3081[-]","TMK4_ARATH^TMK4_ARATH^Q:21-889,H:22-928^58.38%ID^E:0^RecName: Full=Receptor-like kinase TMK4 {ECO:0000303|PubMed:23613767};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^23-58^E:0.00046`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^322-360^E:0.091`PF13855.3^LRR_8^Leucine rich repeat^381-424^E:8e-07`PF00069.22^Pkinase^Protein kinase domain^543-815^E:3.6e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^544-816^E:4.3e-48","sigP:1^23^0.818^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G23750","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45149_c0_g3","roots S.abrotanoides","roots S. yangii",1.25365341206801,"0.00440945773972862","0.00817278001364891","TRINITY_DN45149_c0_g3_i1","RCH1_ARATH^RCH1_ARATH^Q:3342-184,H:34-1100^63.12%ID^E:0^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45149_c0_g3_i1.p1","88-3426[-]","RCH1_ARATH^RCH1_ARATH^Q:12-1102,H:17-1103^61.83%ID^E:0^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^32-72^E:9.5e-06`PF13855.3^LRR_8^Leucine rich repeat^124-183^E:2.6e-07`PF13855.3^LRR_8^Leucine rich repeat^316-376^E:8.7e-07`PF13855.3^LRR_8^Leucine rich repeat^389-448^E:6.2e-08`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^782-1048^E:4.4e-43`PF00069.22^Pkinase^Protein kinase domain^782-1045^E:5.1e-40","sigP:1^31^0.626^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT5G48940","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44923_c1_g1","roots S.abrotanoides","roots S. yangii",1.25085364924963,"0.00320371178005867","0.00608158916003935","TRINITY_DN44923_c1_g1_i6","ELIP1_ARATH^ELIP1_ARATH^Q:206-739,H:1-195^46.94%ID^E:7e-39^RecName: Full=Early light-induced protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44923_c1_g1_i6.p1","206-748[+]","DS22_CRAPL^DS22_CRAPL^Q:1-180,H:1-199^47.24%ID^E:3e-50^RecName: Full=Desiccation stress protein DSP-22, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Linderniaceae; Craterostigma","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^70-170^E:1.9e-08",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN45130_c0_g1","roots S.abrotanoides","roots S. yangii",1.2505552858585,"0.0183156095828232","0.0301707609570607","TRINITY_DN45130_c0_g1_i1","POLX_TOBAC^POLX_TOBAC^Q:1849-2562,H:387-632^45.34%ID^E:5e-92^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:1014-1619,H:104-309^27.23%ID^E:5e-92^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:2562-2717,H:635-689^45.45%ID^E:5e-92^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:1604-1813,H:305-374^31.43%ID^E:5e-92^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:952-1014,H:83-103^52.38%ID^E:5e-92^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:3304-3810,H:1106-1270^51.76%ID^E:9e-42^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:2821-3117,H:921-1019^58.59%ID^E:4e-31^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:3113-3340,H:1019-1117^32.32%ID^E:4e-31^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45130_c0_g1_i1.p1","2176-2586[+]","POLX_TOBAC^POLX_TOBAC^Q:1-129,H:504-632^55.04%ID^E:3e-40^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00665.23^rve^Integrase core domain^3-92^E:2.2e-18",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration","GO:0015074^biological_process^DNA integration",".","."]
["TRINITY_DN41966_c0_g2","roots S.abrotanoides","roots S. yangii",1.24602691876354,"0.0304043730382263","0.0479824110172878","TRINITY_DN41966_c0_g2_i1","LIN1_LOTJA^LIN1_LOTJA^Q:1366-230,H:812-1181^32.11%ID^E:1e-21^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:1660-1439,H:512-584^52.7%ID^E:5e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:2602-2231,H:114-267^32.47%ID^E:1e-12^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN41966_c0_g2_i1.p1","212-3601[-]","LIN1_LOTJA^LIN1_LOTJA^Q:746-1124,H:812-1181^32.11%ID^E:2e-34^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:648-721,H:512-584^52.7%ID^E:3e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:286-457,H:75-267^31.68%ID^E:3e-14^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus","PF04564.12^U-box^U-box domain^647-719^E:6.5e-08",".",".",".",".","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0009877^biological_process^nodulation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN37275_c0_g1","roots S.abrotanoides","roots S. yangii",1.24540409269643,"0.000197046453806627","0.000445118842736758","TRINITY_DN37275_c0_g1_i4","Y1491_ARATH^Y1491_ARATH^Q:350-120,H:87-163^51.95%ID^E:2e-19^RecName: Full=Uncharacterized protein At1g04910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37275_c0_g1_i4.p1","3-455[-]","Y1491_ARATH^Y1491_ARATH^Q:36-112,H:87-163^51.95%ID^E:1e-20^RecName: Full=Uncharacterized protein At1g04910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10250.6^O-FucT^GDP-fucose protein O-fucosyltransferase^40-147^E:8.1e-26",".",".","ENOG410Z25U^DUF246 domain-containing protein","KEGG:ath:AT1G04910","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".",".","."]
["TRINITY_DN38604_c0_g1","roots S.abrotanoides","roots S. yangii",1.24402522231711,"0.000979136318297851","0.00200910977965486","TRINITY_DN38604_c0_g1_i3","HPR3_ARATH^HPR3_ARATH^Q:83-607,H:149-323^60.57%ID^E:1e-69^RecName: Full=Glyoxylate/hydroxypyruvate reductase HPR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38604_c0_g1_i3.p1","314-619[+]","HPR3_ARATH^HPR3_ARATH^Q:1-98,H:226-323^65.31%ID^E:4e-36^RecName: Full=Glyoxylate/hydroxypyruvate reductase HPR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02826.16^2-Hacid_dh_C^D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain^3-64^E:3e-20",".",".","COG1052^Dehydrogenase","KEGG:ath:AT1G12550`KO:K15919","GO:0030267^molecular_function^glyoxylate reductase (NADP) activity`GO:0016618^molecular_function^hydroxypyruvate reductase activity`GO:0051287^molecular_function^NAD binding`GO:0009854^biological_process^oxidative photosynthetic carbon pathway`GO:0009853^biological_process^photorespiration","GO:0051287^molecular_function^NAD binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN15571_c0_g1","roots S.abrotanoides","roots S. yangii",1.2429177337773,"0.000758400905933654","0.0015824419171602","TRINITY_DN15571_c0_g1_i1","CNX3_ARATH^CNX3_ARATH^Q:248-955,H:6-269^55.15%ID^E:5e-83^RecName: Full=Cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN15571_c0_g1_i1.p1","239-958[+]","CNX3_ARATH^CNX3_ARATH^Q:4-239,H:6-269^55.15%ID^E:9e-89^RecName: Full=Cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01967.18^MoaC^MoaC family^97-232^E:2.2e-51",".",".","COG0315^Together with MoaA, is involved in the conversion of 5'- GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (By similarity)","KEGG:ath:AT1G01290`KO:K03639","GO:0009507^cellular_component^chloroplast`GO:0005759^cellular_component^mitochondrial matrix`GO:0005739^cellular_component^mitochondrion`GO:0061597^molecular_function^cyclic pyranopterin monophosphate synthase activity`GO:0006777^biological_process^Mo-molybdopterin cofactor biosynthetic process","GO:0006777^biological_process^Mo-molybdopterin cofactor biosynthetic process",".","."]
["TRINITY_DN45247_c0_g6","roots S.abrotanoides","roots S. yangii",1.24136853286735,"0.00376752017763942","0.00706830600170705","TRINITY_DN45247_c0_g6_i1","SOT12_ARATH^SOT12_ARATH^Q:1403-438,H:7-322^53.56%ID^E:4e-108^RecName: Full=Cytosolic sulfotransferase 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45247_c0_g6_i1.p1","429-1427[-]","SOT12_ARATH^SOT12_ARATH^Q:9-330,H:7-322^53.56%ID^E:6e-112^RecName: Full=Cytosolic sulfotransferase 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00685.24^Sulfotransfer_1^Sulfotransferase domain^68-329^E:2e-72",".",".","ENOG4111H56^Sulfotransferase","KEGG:ath:AT2G03760","GO:0005794^cellular_component^Golgi apparatus`GO:0080118^molecular_function^brassinosteroid sulfotransferase activity`GO:1990135^molecular_function^flavonoid sulfotransferase activity`GO:0008146^molecular_function^sulfotransferase activity`GO:0016131^biological_process^brassinosteroid metabolic process`GO:0006952^biological_process^defense response`GO:0009751^biological_process^response to salicylic acid`GO:0009651^biological_process^response to salt stress","GO:0008146^molecular_function^sulfotransferase activity",".","."]
["TRINITY_DN43811_c1_g5","roots S.abrotanoides","roots S. yangii",1.23651308732085,"0.00367171758301034","0.00690619057468139","TRINITY_DN43811_c1_g5_i2","ZDHC9_ARATH^ZDHC9_ARATH^Q:662-1771,H:5-407^47.54%ID^E:9e-120^RecName: Full=Probable protein S-acyltransferase 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43811_c1_g5_i2.p1","653-1777[+]","ZDHC9_ARATH^ZDHC9_ARATH^Q:4-373,H:5-407^47.54%ID^E:4e-124^RecName: Full=Probable protein S-acyltransferase 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01529.17^zf-DHHC^DHHC palmitoyltransferase^151-276^E:1.8e-37",".",".","COG5273^Zinc finger, DHHC-type containing","KEGG:ath:AT3G26935","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0019706^molecular_function^protein-cysteine S-palmitoyltransferase activity`GO:0008270^molecular_function^zinc ion binding","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN42780_c0_g2","roots S.abrotanoides","roots S. yangii",1.23568352553648,"0.00168316301841082","0.00333517182451008","TRINITY_DN42780_c0_g2_i2","VSR2_ARATH^VSR2_ARATH^Q:236-2062,H:8-613^71.43%ID^E:0^RecName: Full=Vacuolar-sorting receptor 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42780_c0_g2_i2.p1","236-2104[+]","VSR2_ARATH^VSR2_ARATH^Q:1-609,H:8-613^71.43%ID^E:0^RecName: Full=Vacuolar-sorting receptor 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02225.19^PA^PA domain^78-158^E:9.5e-08`PF07645.12^EGF_CA^Calcium-binding EGF domain^511-541^E:0.00012","sigP:1^18^0.864^YES",".","ENOG411041H^PA domain",".","GO:0030665^cellular_component^clathrin-coated vesicle membrane`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0031902^cellular_component^late endosome membrane`GO:0005509^molecular_function^calcium ion binding`GO:0015031^biological_process^protein transport","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN46337_c1_g1","roots S.abrotanoides","roots S. yangii",1.23291087386815,"0.0302358828783522","0.0477542707311084","TRINITY_DN46337_c1_g1_i10","FRS5_ARATH^FRS5_ARATH^Q:2261-1068,H:72-467^35.71%ID^E:7e-90^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FRS5_ARATH^FRS5_ARATH^Q:1033-443,H:479-673^31.5%ID^E:7e-90^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46337_c1_g1_i10.p1","972-2315[-]","FRS5_ARATH^FRS5_ARATH^Q:19-429,H:72-480^36.04%ID^E:6e-76^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03101.12^FAR1^FAR1 DNA-binding domain^34-130^E:3.8e-21`PF10551.6^MULE^MULE transposase domain^251-343^E:6.1e-32",".",".","ENOG410ZJSX^protein FAR1-RELATED SEQUENCE 5-like","KEGG:ath:AT4G38180","GO:0005634^cellular_component^nucleus`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN57286_c0_g1","roots S.abrotanoides","roots S. yangii",1.23005220653565,"0.0209648375072861","0.0341641505185512","TRINITY_DN57286_c0_g1_i1","GAI1_VITVI^GAI1_VITVI^Q:1457-342,H:213-575^38.42%ID^E:4e-75^RecName: Full=DELLA protein GAI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN57286_c0_g1_i1.p1","336-1799[-]","GAI1_VITVI^GAI1_VITVI^Q:113-486,H:211-575^38.48%ID^E:4e-82^RecName: Full=DELLA protein GAI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF03514.11^GRAS^GRAS domain family^116-486^E:1.3e-115",".",".","ENOG410YBFY^DELLA protein","KEGG:vvi:100232937`KO:K14494","GO:0005634^cellular_component^nucleus`GO:0000989^molecular_function^transcription factor activity, transcription factor binding`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN35988_c1_g1","roots S.abrotanoides","roots S. yangii",1.2278515177927,{"v":5487907296.17483,"d":"5.49E+09"},"0.000133429879709729","TRINITY_DN35988_c1_g1_i2","PMTG_ARATH^PMTG_ARATH^Q:164-2044,H:2-619^64.35%ID^E:0^RecName: Full=Probable methyltransferase PMT16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35988_c1_g1_i2.p1","113-2062[+]","PMTF_ARATH^PMTF_ARATH^Q:28-644,H:18-626^65.92%ID^E:0^RecName: Full=Probable methyltransferase PMT15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03141.13^Methyltransf_29^Putative S-adenosyl-L-methionine-dependent methyltransferase^128-637^E:1e-227`PF08241.9^Methyltransf_11^Methyltransferase domain^246-339^E:5.6e-06",".",".","ENOG410YAWV^Methyltransferase","KEGG:ath:AT4G00750","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0008168^molecular_function^methyltransferase activity","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46630_c5_g10","roots S.abrotanoides","roots S. yangii",1.22745295521218,"0.000445023352587918","0.000961967932435326","TRINITY_DN46630_c5_g10_i1","MYB39_ARATH^MYB39_ARATH^Q:4-117,H:93-130^86.84%ID^E:9e-15^RecName: Full=Transcription factor MYB39;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46630_c5_g10_i1.p1","1-768[+]","MYB39_ARATH^MYB39_ARATH^Q:2-53,H:93-148^66.07%ID^E:4e-17^RecName: Full=Transcription factor MYB39;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT4G17785`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN45848_c2_g3","roots S.abrotanoides","roots S. yangii",1.21863318931345,{"v":4822094326.04601,"d":"4.82E+09"},"0.000118011857374136","TRINITY_DN45848_c2_g3_i6","Y1133_ARATH^Y1133_ARATH^Q:4151-2538,H:27-583^42.93%ID^E:0^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1133_ARATH^Y1133_ARATH^Q:2538-1849,H:615-842^57.39%ID^E:0^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45848_c2_g3_i6.p1","2526-4244[-]","Y1133_ARATH^Y1133_ARATH^Q:32-569,H:27-583^42.93%ID^E:3e-150^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^82-186^E:1.6e-31`PF00954.17^S_locus_glycop^S-locus glycoprotein domain^217-325^E:5.2e-29`PF08276.8^PAN_2^PAN-like domain^352-411^E:2.7e-14`PF00069.22^Pkinase^Protein kinase domain^512-571^E:7e-08`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^513-569^E:5.7e-07","sigP:1^32^0.657^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G11330","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN41707_c0_g1","roots S.abrotanoides","roots S. yangii",1.21854465460103,"0.00379232774673298","0.00711007378188728","TRINITY_DN41707_c0_g1_i4","E139_ARATH^E139_ARATH^Q:234-494,H:23-109^73.56%ID^E:7e-26^RecName: Full=Glucan endo-1,3-beta-glucosidase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41707_c0_g1_i4.p2","156-527[+]","E139_ARATH^E139_ARATH^Q:25-122,H:21-117^70.41%ID^E:3e-39^RecName: Full=Glucan endo-1,3-beta-glucosidase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^30-112^E:5e-14","sigP:1^29^0.869^YES",".","ENOG410YE41^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT5G58480","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005886^cellular_component^plasma membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN41433_c0_g1","roots S.abrotanoides","roots S. yangii",1.2105026637045,"0.00825064596347343","0.0145445614426127","TRINITY_DN41433_c0_g1_i3","TCX3_ARATH^TCX3_ARATH^Q:406-92,H:331-432^63.89%ID^E:1e-35^RecName: Full=Protein tesmin/TSO1-like CXC 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41433_c0_g1_i3.p1","2-1537[-]","TCX3_ARATH^TCX3_ARATH^Q:353-482,H:310-432^62.41%ID^E:4e-44^RecName: Full=Protein tesmin/TSO1-like CXC 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^375-410^E:5.5e-11`PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^463-482^E:4.1e-05",".",".","ENOG4110UR5^Tesmin TSO1-like CXC domain containing protein","KEGG:ath:AT3G22760","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0007275^biological_process^multicellular organism development`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN74769_c0_g1","roots S.abrotanoides","roots S. yangii",1.21031773553314,"0.0269061097076274","0.0429026771295336","TRINITY_DN74769_c0_g1_i1","CVIF2_ARATH^CVIF2_ARATH^Q:227-673,H:30-178^54.36%ID^E:1e-45^RecName: Full=Cell wall / vacuolar inhibitor of fructosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN74769_c0_g1_i1.p1","149-682[+]","CVIF2_ARATH^CVIF2_ARATH^Q:1-175,H:1-178^51.4%ID^E:5e-57^RecName: Full=Cell wall / vacuolar inhibitor of fructosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04043.12^PMEI^Plant invertase/pectin methylesterase inhibitor^26-170^E:7.9e-25","sigP:1^17^0.875^YES",".","ENOG410YWNR^cell wall vacuolar inhibitor of fructosidase","KEGG:ath:AT5G64620","GO:0005773^cellular_component^vacuole`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0043086^biological_process^negative regulation of catalytic activity`GO:0080167^biological_process^response to karrikin","GO:0004857^molecular_function^enzyme inhibitor activity",".","."]
["TRINITY_DN47044_c1_g3","roots S.abrotanoides","roots S. yangii",1.20570172165743,"0.0027683401027371","0.0053101921007509","TRINITY_DN47044_c1_g3_i2","R1B16_SOLDE^R1B16_SOLDE^Q:92-1228,H:849-1245^30.49%ID^E:4e-30^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47044_c1_g3_i2.p1","2-1246[+]","R1B16_SOLDE^R1B16_SOLDE^Q:8-409,H:825-1245^31.34%ID^E:2e-37^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN37893_c0_g2","roots S.abrotanoides","roots S. yangii",1.20453684295503,"0.000999997811883013","0.00204875633244048","TRINITY_DN37893_c0_g2_i4","BBR_ARATH^BBR_ARATH^Q:583-203,H:213-339^44.7%ID^E:6e-26^RecName: Full=E3 ubiquitin ligase BIG BROTHER-related;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37893_c0_g2_i4.p1","185-751[-]","BBR_ARATH^BBR_ARATH^Q:57-183,H:213-339^44.7%ID^E:5e-27^RecName: Full=E3 ubiquitin ligase BIG BROTHER-related;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12678.4^zf-rbx1^RING-H2 zinc finger domain^120-173^E:3.5e-09`PF13639.3^zf-RING_2^Ring finger domain^131-173^E:7e-12`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^131-172^E:5.2e-08`PF17123.2^zf-RING_11^RING-like zinc finger^132-159^E:6.2e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^132-172^E:4.1e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^132-162^E:0.0017",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT3G19910`KO:K19045","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0051865^biological_process^protein autoubiquitination`GO:0016567^biological_process^protein ubiquitination","GO:0008270^molecular_function^zinc ion binding`GO:0005515^molecular_function^protein binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN41229_c0_g1","roots S.abrotanoides","roots S. yangii",1.19555344567994,"0.000116241198233444","0.000270680500028391","TRINITY_DN41229_c0_g1_i2","PRXQ_POPJC^PRXQ_POPJC^Q:969-538,H:1-143^73.61%ID^E:4e-58^RecName: Full=Peroxiredoxin Q, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus",".","TRINITY_DN41229_c0_g1_i2.p1","517-969[-]","PRXQ_POPJC^PRXQ_POPJC^Q:1-144,H:1-143^73.61%ID^E:5e-61^RecName: Full=Peroxiredoxin Q, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus","PF08534.7^Redoxin^Redoxin^69-137^E:1.6e-16`PF00578.18^AhpC-TSA^AhpC/TSA family^70-142^E:1.3e-26",".",".",".",".","GO:0009534^cellular_component^chloroplast thylakoid`GO:0004601^molecular_function^peroxidase activity`GO:0051920^molecular_function^peroxiredoxin activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0016209^molecular_function^antioxidant activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN4896_c0_g1","roots S.abrotanoides","roots S. yangii",1.19337214271788,"0.0243329816897413","0.0391324877053678","TRINITY_DN4896_c0_g1_i1","PUB24_ARATH^PUB24_ARATH^Q:178-1395,H:6-445^40.44%ID^E:6e-101^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN4896_c0_g1_i1.p1","175-1407[+]","PUB24_ARATH^PUB24_ARATH^Q:2-407,H:6-445^40.67%ID^E:3e-105^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^6-82^E:4.3e-17",".",".","ENOG410Y8GW^Ubiquitin-protein ligase","KEGG:ath:AT3G11840","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0006952^biological_process^defense response","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN30344_c0_g1","roots S.abrotanoides","roots S. yangii",1.17866559678962,"0.0180764265307941","0.029824235825032","TRINITY_DN30344_c0_g1_i1","PUB23_ARATH^PUB23_ARATH^Q:1218-43,H:9-410^49.63%ID^E:6e-131^RecName: Full=E3 ubiquitin-protein ligase PUB23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN30344_c0_g1_i1.p1","34-1221[-]","PUB23_ARATH^PUB23_ARATH^Q:2-393,H:9-410^49.63%ID^E:4e-132^RecName: Full=E3 ubiquitin-protein ligase PUB23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^5-74^E:4.3e-20",".",".","ENOG410YC1Z^e3 ubiquitin-protein ligase","KEGG:ath:AT2G35930","GO:0005829^cellular_component^cytosol`GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0006952^biological_process^defense response`GO:0051865^biological_process^protein autoubiquitination`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin`GO:0009414^biological_process^response to water deprivation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN46304_c3_g2","roots S.abrotanoides","roots S. yangii",1.17773485376866,"0.00142032338158274","0.00284951932252482","TRINITY_DN46304_c3_g2_i7","WAKLB_ARATH^WAKLB_ARATH^Q:1167-268,H:391-690^64%ID^E:1e-128^RecName: Full=Wall-associated receptor kinase-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46304_c3_g2_i7.p1","151-1167[-]","WAKLB_ARATH^WAKLB_ARATH^Q:1-300,H:391-690^64%ID^E:4e-135^RecName: Full=Wall-associated receptor kinase-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^26-293^E:4.2e-52`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^32-296^E:1.8e-49",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G16130","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0046777^biological_process^protein autophosphorylation","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44569_c6_g2","roots S.abrotanoides","roots S. yangii",1.17736621708632,{"v":9364981805.57804,"d":"9.36E+09"},"0.000220797364466843","TRINITY_DN44569_c6_g2_i2","MYB4_ORYSJ^MYB4_ORYSJ^Q:94-441,H:1-116^77.59%ID^E:9e-64^RecName: Full=Myb-related protein Myb4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44569_c6_g2_i2.p1","1-453[+]","MYB39_ARATH^MYB39_ARATH^Q:32-151,H:1-121^76.03%ID^E:6e-64^RecName: Full=Transcription factor MYB39;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^45-92^E:2.5e-16`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^48-107^E:8.8e-13`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^98-142^E:1.1e-15`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^102-145^E:3.3e-06",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT4G17785`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN46281_c4_g2","roots S.abrotanoides","roots S. yangii",1.16577971033211,"0.00101309556574593","0.00207376580238147","TRINITY_DN46281_c4_g2_i1","PPR38_ARATH^PPR38_ARATH^Q:1915-197,H:2-595^35.07%ID^E:9e-121^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:1240-170,H:70-394^26.94%ID^E:2e-33^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46281_c4_g2_i1.p1","128-1936[-]","PPR38_ARATH^PPR38_ARATH^Q:8-580,H:2-595^35.07%ID^E:2e-121^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:233-589,H:70-394^26.94%ID^E:1e-33^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12854.4^PPR_1^PPR repeat^140-167^E:1.8e-07`PF01535.17^PPR^PPR repeat^146-170^E:0.11`PF13041.3^PPR_2^PPR repeat family^179-228^E:3.3e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^207-258^E:6.6e-06`PF12854.4^PPR_1^PPR repeat^211-242^E:3.4e-09`PF13041.3^PPR_2^PPR repeat family^214-262^E:1.2e-15`PF01535.17^PPR^PPR repeat^218-247^E:3.7e-06`PF12854.4^PPR_1^PPR repeat^245-276^E:2e-08`PF01535.17^PPR^PPR repeat^252-276^E:0.0056`PF13812.3^PPR_3^Pentatricopeptide repeat domain^273-330^E:8.5e-08`PF13041.3^PPR_2^PPR repeat family^286-332^E:8.5e-16`PF12854.4^PPR_1^PPR repeat^286-312^E:7.5e-08`PF01535.17^PPR^PPR repeat^287-316^E:5.3e-06`PF12854.4^PPR_1^PPR repeat^316-345^E:1.3e-08`PF01535.17^PPR^PPR repeat^323-351^E:2.2e-05`PF13041.3^PPR_2^PPR repeat family^327-368^E:8.2e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^343-398^E:1.6e-07`PF12854.4^PPR_1^PPR repeat^351-381^E:2e-11`PF01535.17^PPR^PPR repeat^357-387^E:1.7e-07`PF13041.3^PPR_2^PPR repeat family^358-401^E:3.7e-14`PF13812.3^PPR_3^Pentatricopeptide repeat domain^378-431^E:0.00034`PF12854.4^PPR_1^PPR repeat^385-418^E:6.3e-06`PF01535.17^PPR^PPR repeat^393-418^E:0.0037`PF13041.3^PPR_2^PPR repeat family^421-469^E:2.3e-12`PF01535.17^PPR^PPR repeat^424-454^E:0.054`PF13812.3^PPR_3^Pentatricopeptide repeat domain^446-500^E:0.00023`PF12854.4^PPR_1^PPR repeat^453-483^E:1.5e-08`PF13041.3^PPR_2^PPR repeat family^457-505^E:7.4e-09`PF01535.17^PPR^PPR repeat^459-489^E:0.00015`PF13812.3^PPR_3^Pentatricopeptide repeat domain^480-536^E:9.4e-07`PF12854.4^PPR_1^PPR repeat^487-520^E:5.8e-06`PF13041.3^PPR_2^PPR repeat family^495-538^E:1.2e-11`PF01535.17^PPR^PPR repeat^495-524^E:8.5e-07",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12700","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN46464_c1_g2","roots S.abrotanoides","roots S. yangii",1.16474975657295,"0.0263877731922305","0.0421362881908854","TRINITY_DN46464_c1_g2_i2","ALE2_ARATH^ALE2_ARATH^Q:2226-310,H:87-728^66.36%ID^E:0^RecName: Full=Receptor-like serine/threonine-protein kinase ALE2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46464_c1_g2_i2.p1","253-2490[-]","ALE2_ARATH^ALE2_ARATH^Q:89-727,H:87-728^66.36%ID^E:0^RecName: Full=Receptor-like serine/threonine-protein kinase ALE2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^357-567^E:2e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^358-627^E:4.2e-47",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G20300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0030154^biological_process^cell differentiation`GO:0042335^biological_process^cuticle development`GO:0048645^biological_process^organ formation`GO:0046777^biological_process^protein autophosphorylation`GO:0010068^biological_process^protoderm histogenesis","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46189_c5_g1","roots S.abrotanoides","roots S. yangii",1.16343600274985,"0.020483225619269","0.0334456408969142","TRINITY_DN46189_c5_g1_i4","Y5262_ARATH^Y5262_ARATH^Q:1792-458,H:17-411^23.55%ID^E:2e-13^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46189_c5_g1_i4.p1","116-2023[-]","Y5262_ARATH^Y5262_ARATH^Q:78-522,H:17-411^23.55%ID^E:2e-13^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^127-202^E:1.2e-06`PF13962.3^PGG^Domain of unknown function^464-575^E:1.9e-20",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT5G02620","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN45521_c1_g1","roots S.abrotanoides","roots S. yangii",1.15907359666042,"0.000189241854134458","0.000428493245248857","TRINITY_DN45521_c1_g1_i4","R1B17_SOLDE^R1B17_SOLDE^Q:651-1,H:565-788^37.72%ID^E:6e-31^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45521_c1_g1_i4.p1","1-933[-]","R1B17_SOLDE^R1B17_SOLDE^Q:65-311,H:535-788^36.43%ID^E:2e-34^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^76-311^E:7.1e-47",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN37299_c0_g1","roots S.abrotanoides","roots S. yangii",1.154278050477,{"v":7412924370.46758,"d":"7.41E+09"},"0.000177090047738744","TRINITY_DN37299_c0_g1_i1","NTF2_ARATH^NTF2_ARATH^Q:855-481,H:2-126^83.2%ID^E:4e-73^RecName: Full=Nuclear transport factor 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37299_c0_g1_i1.p1","478-921[-]","NTF2_ARATH^NTF2_ARATH^Q:23-147,H:2-126^83.2%ID^E:1e-75^RecName: Full=Nuclear transport factor 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02136.17^NTF2^Nuclear transport factor 2 (NTF2) domain^30-144^E:2.4e-36",".",".","ENOG4111QUX^nuclear transport factor",".","GO:0005737^cellular_component^cytoplasm`GO:0015031^biological_process^protein transport","GO:0006810^biological_process^transport`GO:0005622^cellular_component^intracellular",".","."]
["TRINITY_DN46542_c2_g5","roots S.abrotanoides","roots S. yangii",1.15121114521769,"0.00111853976086996","0.00227576781901023","TRINITY_DN46542_c2_g5_i1","PER66_ARATH^PER66_ARATH^Q:167-1030,H:12-300^68.51%ID^E:9e-137^RecName: Full=Peroxidase 66;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46542_c2_g5_i1.p1","137-1099[+]","PER66_ARATH^PER66_ARATH^Q:11-320,H:12-322^67.52%ID^E:1e-154^RecName: Full=Peroxidase 66;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^42-286^E:1.4e-72","sigP:1^24^0.751^YES",".","ENOG410YFBY^peroxidase","KEGG:ath:AT5G51890`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN40403_c0_g1","roots S.abrotanoides","roots S. yangii",1.1509461852251,"0.0254156934874214","0.0407283718589149","TRINITY_DN40403_c0_g1_i1","KIC_ARATH^KIC_ARATH^Q:323-33,H:22-118^51.55%ID^E:2e-28^RecName: Full=Calcium-binding protein KIC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40403_c0_g1_i1.p1","15-356[-]","KIC_ARATH^KIC_ARATH^Q:12-108,H:22-118^51.55%ID^E:8e-29^RecName: Full=Calcium-binding protein KIC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13833.3^EF-hand_8^EF-hand domain pair^44-95^E:1.8e-13",".",".","COG5126^Calcium-binding protein","KEGG:ath:AT2G46600","GO:0005509^molecular_function^calcium ion binding`GO:0010091^biological_process^trichome branching","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN42953_c0_g1","roots S.abrotanoides","roots S. yangii",1.14404961595157,"0.00133572718033032","0.00268964781966053","TRINITY_DN42953_c0_g1_i4","BGL12_ORYSI^BGL12_ORYSI^Q:657-1163,H:96-264^60.95%ID^E:2e-131^RecName: Full=Beta-glucosidase 12 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`BGL12_ORYSI^BGL12_ORYSI^Q:1241-1735,H:262-423^49.7%ID^E:2e-131^RecName: Full=Beta-glucosidase 12 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`BGL12_ORYSI^BGL12_ORYSI^Q:1803-2168,H:419-504^37.7%ID^E:2e-131^RecName: Full=Beta-glucosidase 12 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`BGL12_ORYSI^BGL12_ORYSI^Q:346-558,H:26-96^57.75%ID^E:2e-131^RecName: Full=Beta-glucosidase 12 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42953_c0_g1_i4.p1","2412-3872[-]","MS5_ARATH^MS5_ARATH^Q:1-88,H:192-282^51.65%ID^E:3e-22^RecName: Full=Protein POLLENLESS 3 {ECO:0000303|Ref.2};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00515.25^TPR_1^Tetratricopeptide repeat^2-32^E:5.9e-08`PF13181.3^TPR_8^Tetratricopeptide repeat^2-32^E:6e-06`PF07719.14^TPR_2^Tetratricopeptide repeat^3-32^E:1e-06`PF13374.3^TPR_10^Tetratricopeptide repeat^3-28^E:0.00051`PF13176.3^TPR_7^Tetratricopeptide repeat^3-34^E:0.00028`PF14559.3^TPR_19^Tetratricopeptide repeat^11-70^E:5.3e-08",".",".","ENOG4110VSD^male sterility MS5","KEGG:ath:AT4G20900","GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0007140^biological_process^male meiosis`GO:0051321^biological_process^meiotic cell cycle`GO:0009556^biological_process^microsporogenesis","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45894_c1_g1","roots S.abrotanoides","roots S. yangii",1.13989205597545,"0.000846454135976586","0.00175398806091084","TRINITY_DN45894_c1_g1_i4","UBC36_ARATH^UBC36_ARATH^Q:583-260,H:1-108^98.15%ID^E:3e-69^RecName: Full=Ubiquitin-conjugating enzyme E2 36;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45894_c1_g1_i4.p1","212-583[-]","UBC36_ARATH^UBC36_ARATH^Q:1-108,H:1-108^98.15%ID^E:4e-72^RecName: Full=Ubiquitin-conjugating enzyme E2 36;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00179.23^UQ_con^Ubiquitin-conjugating enzyme^9-108^E:1.1e-35",".",".","COG5078^ubiquitin-conjugating enzyme",".","GO:0005524^molecular_function^ATP binding`GO:0016740^molecular_function^transferase activity`GO:0016567^biological_process^protein ubiquitination",".",".","."]
["TRINITY_DN57610_c0_g1","roots S.abrotanoides","roots S. yangii",1.13705045892216,"0.0197398316214626","0.0323316233685186","TRINITY_DN57610_c0_g1_i1","SCP28_ARATH^SCP28_ARATH^Q:1331-18,H:24-462^61.76%ID^E:0^RecName: Full=Serine carboxypeptidase-like 28;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN57610_c0_g1_i1.p1","15-1421[-]","SCP28_ARATH^SCP28_ARATH^Q:23-468,H:14-462^60.67%ID^E:0^RecName: Full=Serine carboxypeptidase-like 28;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^51-459^E:1.4e-136","sigP:1^31^0.511^YES",".","COG2939^carboxy-peptidase","KEGG:ath:AT2G35770`KO:K16297","GO:0005576^cellular_component^extracellular region`GO:0005773^cellular_component^vacuole`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN23669_c0_g1","roots S.abrotanoides","roots S. yangii",1.13209641506737,"0.00646488122062559","0.0116171616300405","TRINITY_DN23669_c0_g1_i1","MDHC_MEDSA^MDHC_MEDSA^Q:146-1051,H:1-302^82.12%ID^E:1e-175^RecName: Full=Malate dehydrogenase, cytoplasmic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN23669_c0_g1_i1.p1","50-1054[+]","MDHC_MEDSA^MDHC_MEDSA^Q:33-334,H:1-302^82.12%ID^E:8e-178^RecName: Full=Malate dehydrogenase, cytoplasmic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF00056.20^Ldh_1_N^lactate/malate dehydrogenase, NAD binding domain^40-185^E:6.8e-31`PF02866.15^Ldh_1_C^lactate/malate dehydrogenase, alpha/beta C-terminal domain^189-333^E:3.2e-28",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0030060^molecular_function^L-malate dehydrogenase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006108^biological_process^malate metabolic process`GO:0006099^biological_process^tricarboxylic acid cycle","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",".","."]
["TRINITY_DN44991_c1_g3","roots S.abrotanoides","roots S. yangii",1.13196918013828,"0.0248731492856792","0.0399230620514224","TRINITY_DN44991_c1_g3_i11","IQD1_ARATH^IQD1_ARATH^Q:391-1062,H:106-287^35.09%ID^E:3e-12^RecName: Full=Protein IQ-DOMAIN 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44991_c1_g3_i11.p2","844-1500[+]","IQD1_ARATH^IQD1_ARATH^Q:4-73,H:220-287^37.14%ID^E:4e-06^RecName: Full=Protein IQ-DOMAIN 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13178.3^DUF4005^Protein of unknown function (DUF4005)^121-180^E:3.4e-05",".",".","ENOG411040N^NA",".","GO:0005634^cellular_component^nucleus",".",".","."]
["TRINITY_DN43594_c5_g3","roots S.abrotanoides","roots S. yangii",1.12609200819826,{"v":4802666225.54642,"d":"4.80E+09"},"0.000117567283168033","TRINITY_DN43594_c5_g3_i2","MAX1_ARATH^MAX1_ARATH^Q:520-98,H:381-521^74.47%ID^E:9e-73^RecName: Full=Cytochrome P450 711A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43594_c5_g3_i2.p1","92-547[-]","MAX1_ARATH^MAX1_ARATH^Q:10-150,H:381-521^74.47%ID^E:8e-74^RecName: Full=Cytochrome P450 711A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^10-132^E:3.8e-40",".",".","COG2124^Cytochrome p450","KEGG:ath:AT2G26170","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0009926^biological_process^auxin polar transport`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0009963^biological_process^positive regulation of flavonoid biosynthetic process`GO:0009934^biological_process^regulation of meristem structural organization`GO:0010223^biological_process^secondary shoot formation","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47094_c1_g2","roots S.abrotanoides","roots S. yangii",1.12519301680075,"0.00879896856050199","0.0154303634311797","TRINITY_DN47094_c1_g2_i1","ZAT11_ARATH^ZAT11_ARATH^Q:557-96,H:1-163^45.18%ID^E:1e-30^RecName: Full=Zinc finger protein ZAT11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47094_c1_g2_i1.p1","78-563[-]","ZAT11_ARATH^ZAT11_ARATH^Q:3-156,H:1-163^46.11%ID^E:4e-36^RecName: Full=Zinc finger protein ZAT11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13912.3^zf-C2H2_6^C2H2-type zinc finger^44-68^E:3.7e-12`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^84-108^E:2e-10",".",".","COG5048^Zinc finger protein","KEGG:ath:AT2G37430","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071289^biological_process^cellular response to nickel ion`GO:2000280^biological_process^regulation of root development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0010200^biological_process^response to chitin`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN40907_c0_g2","roots S.abrotanoides","roots S. yangii",1.12285937477522,"0.000149357764519656","0.000343021970938986","TRINITY_DN40907_c0_g2_i1","ZDHC3_ARATH^ZDHC3_ARATH^Q:369-2159,H:1-513^54.5%ID^E:0^RecName: Full=Protein S-acyltransferase 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40907_c0_g2_i1.p1","369-2303[+]","ZDHC3_ARATH^ZDHC3_ARATH^Q:1-644,H:1-565^53.75%ID^E:0^RecName: Full=Protein S-acyltransferase 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01529.17^zf-DHHC^DHHC palmitoyltransferase^151-288^E:9.1e-34",".",".","COG5273^Zinc finger, DHHC-type containing","KEGG:ath:AT2G33640`KO:K18932","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0019706^molecular_function^protein-cysteine S-palmitoyltransferase activity`GO:0008270^molecular_function^zinc ion binding","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN47329_c0_g1","roots S.abrotanoides","roots S. yangii",1.1227533434489,{"v":8210855363.43871,"d":"8.21E+09"},"0.000195217418064875","TRINITY_DN47329_c0_g1_i7",".",".","TRINITY_DN47329_c0_g1_i7.p1","409-945[-]","R1A6_SOLDE^R1A6_SOLDE^Q:6-154,H:1085-1228^33.55%ID^E:2e-10^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN32637_c0_g1","roots S.abrotanoides","roots S. yangii",1.12154909427534,"0.00769651522630669","0.0136512621048839","TRINITY_DN32637_c0_g1_i2","RGAP2_ARATH^RGAP2_ARATH^Q:1533-766,H:39-298^74.71%ID^E:2e-135^RecName: Full=Rho GTPase-activating protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32637_c0_g1_i2.p1","355-1608[-]","RGAP2_ARATH^RGAP2_ARATH^Q:26-399,H:39-430^56.27%ID^E:1e-142^RecName: Full=Rho GTPase-activating protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00786.25^PBD^P21-Rho-binding domain^62-89^E:0.00011`PF00620.24^RhoGAP^RhoGAP domain^125-260^E:6.5e-18",".",".","ENOG410XRR2^rho GTPase activating protein","KEGG:ath:AT4G03100","GO:0005096^molecular_function^GTPase activator activity`GO:0007165^biological_process^signal transduction","GO:0007165^biological_process^signal transduction",".","."]
["TRINITY_DN45685_c0_g1","roots S.abrotanoides","roots S. yangii",1.12143152755822,"0.00435533729349032","0.00808104650490823","TRINITY_DN45685_c0_g1_i1","U86A1_ARATH^U86A1_ARATH^Q:2384-960,H:1-477^61.95%ID^E:0^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U86A1_ARATH^U86A1_ARATH^Q:5-625,H:272-477^54.11%ID^E:3e-70^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45685_c0_g1_i1.p1","846-2480[-]","U86A1_ARATH^U86A1_ARATH^Q:33-507,H:1-477^61.95%ID^E:0^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^314-464^E:2.4e-21",".",".","COG1819^Transferase","KEGG:ath:AT2G36970","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46077_c1_g2","roots S.abrotanoides","roots S. yangii",1.11949628036443,"0.00660149918667901","0.0118398156990178","TRINITY_DN46077_c1_g2_i1","CSE_ARATH^CSE_ARATH^Q:1136-267,H:35-324^31.62%ID^E:9e-45^RecName: Full=Caffeoylshikimate esterase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46077_c1_g2_i1.p1","180-1154[-]","CSE_ARATH^CSE_ARATH^Q:7-296,H:35-324^31.62%ID^E:4e-46^RecName: Full=Caffeoylshikimate esterase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^35-272^E:1.4e-62`PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^40-158^E:7.9e-09`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^40-271^E:2.8e-09",".",".","COG2267^alpha beta hydrolase fold","KEGG:ath:AT1G52760`KO:K18368","GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0003846^molecular_function^2-acylglycerol O-acyltransferase activity`GO:0090430^molecular_function^caffeoyl-CoA: alcohol caffeoyl transferase activity`GO:0016787^molecular_function^hydrolase activity`GO:0004622^molecular_function^lysophospholipase activity`GO:0009809^biological_process^lignin biosynthetic process`GO:0006629^biological_process^lipid metabolic process`GO:0046686^biological_process^response to cadmium ion`GO:0042542^biological_process^response to hydrogen peroxide`GO:0006979^biological_process^response to oxidative stress`GO:0010043^biological_process^response to zinc ion",".",".","."]
["TRINITY_DN41948_c0_g2","roots S.abrotanoides","roots S. yangii",1.11886778807113,"0.00047365659552849","0.00101975951114667","TRINITY_DN41948_c0_g2_i1","PLP2_ARATH^PLP2_ARATH^Q:1226-63,H:7-394^58.42%ID^E:1e-157^RecName: Full=Patatin-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41948_c0_g2_i1.p1","3-1250[-]","PLP2_ARATH^PLP2_ARATH^Q:9-396,H:7-394^58.42%ID^E:3e-158^RecName: Full=Patatin-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01734.19^Patatin^Patatin-like phospholipase^23-228^E:1.2e-24",".",".","COG3621^Patatin group","KEGG:ath:AT2G26560","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0047372^molecular_function^acylglycerol lipase activity`GO:0016298^molecular_function^lipase activity`GO:0004620^molecular_function^phospholipase activity`GO:0071456^biological_process^cellular response to hypoxia`GO:0051607^biological_process^defense response to virus`GO:0016042^biological_process^lipid catabolic process`GO:0006629^biological_process^lipid metabolic process`GO:0031408^biological_process^oxylipin biosynthetic process`GO:0009626^biological_process^plant-type hypersensitive response`GO:0046686^biological_process^response to cadmium ion","GO:0006629^biological_process^lipid metabolic process",".","."]
["TRINITY_DN40913_c0_g1","roots S.abrotanoides","roots S. yangii",1.11211107449581,"0.00893067713196313","0.0156429712296412","TRINITY_DN40913_c0_g1_i2","POK1_ARATH^POK1_ARATH^Q:202-3477,H:14-1048^52.19%ID^E:0^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`POK1_ARATH^POK1_ARATH^Q:3685-6279,H:1214-2066^40.77%ID^E:9e-157^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40913_c0_g1_i2.p1","163-6303[+]","POK1_ARATH^POK1_ARATH^Q:14-1105,H:14-1048^52.64%ID^E:0^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`POK1_ARATH^POK1_ARATH^Q:1175-2039,H:1214-2066^40.77%ID^E:2e-166^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16796.2^Microtub_bd^Microtubule binding^162-314^E:5.4e-22`PF00225.20^Kinesin^Kinesin motor domain^168-499^E:9.6e-109`PF06548.8^Kinesin-related^Kinesin-related^572-752^E:6.5e-18`PF12711.4^Kinesin-relat_1^Kinesin motor^633-718^E:2.6e-29",".",".","COG5059^Kinesin family member","KEGG:ath:AT3G17360`KO:K10400","GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0009524^cellular_component^phragmoplast`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0003777^molecular_function^microtubule motor activity`GO:0000911^biological_process^cytokinesis by cell plate formation`GO:0007018^biological_process^microtubule-based movement`GO:0000281^biological_process^mitotic cytokinesis","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN45142_c6_g1","roots S.abrotanoides","roots S. yangii",1.10896473295301,"0.000304968273487255","0.000673925856493784","TRINITY_DN45142_c6_g1_i11",".",".","TRINITY_DN45142_c6_g1_i11.p1","1-822[+]","GRP3_DAUCA^GRP3_DAUCA^Q:31-84,H:27-86^63.33%ID^E:5e-11^RecName: Full=Glycine-rich protein A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus`GRP3_DAUCA^GRP3_DAUCA^Q:16-67,H:27-86^60%ID^E:1e-07^RecName: Full=Glycine-rich protein A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus`GRP3_DAUCA^GRP3_DAUCA^Q:51-95,H:27-79^66.04%ID^E:4e-07^RecName: Full=Glycine-rich protein A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus`GRP3_DAUCA^GRP3_DAUCA^Q:1-52,H:27-86^58.33%ID^E:6e-07^RecName: Full=Glycine-rich protein A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF03803.12^Scramblase^Scramblase^97-262^E:3.3e-17",".",".",".",".",".",".",".","."]
["TRINITY_DN117452_c0_g1","roots S.abrotanoides","roots S. yangii",1.10483029576488,"0.00456859938073695","0.00844076765040568","TRINITY_DN117452_c0_g1_i1","ZAT4_ARATH^ZAT4_ARATH^Q:1173-1544,H:194-314^48.85%ID^E:5e-25^RecName: Full=Zinc finger protein ZAT4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN117452_c0_g1_i1.p1","387-1598[+]","ZAT9_ARATH^ZAT9_ARATH^Q:76-381,H:1-282^26.73%ID^E:9e-24^RecName: Full=Zinc finger protein ZAT9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13912.3^zf-C2H2_6^C2H2-type zinc finger^5-28^E:1.4e-06`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^80-102^E:9.9e-09`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^263-287^E:5.7e-11`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^322-345^E:8.3e-12",".",".","COG5048^Zinc finger protein","KEGG:ath:AT3G60580","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN39954_c0_g1","roots S.abrotanoides","roots S. yangii",1.10090513076298,"0.0191451872145374","0.0314353690992178","TRINITY_DN39954_c0_g1_i4","Y1341_ORYSJ^Y1341_ORYSJ^Q:599-1714,H:135-495^38.46%ID^E:3e-80^RecName: Full=B3 domain-containing protein Os01g0234100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN39954_c0_g1_i4.p1","599-1717[+]","Y1341_ORYSJ^Y1341_ORYSJ^Q:1-372,H:135-495^38.2%ID^E:1e-83^RecName: Full=B3 domain-containing protein Os01g0234100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02362.18^B3^B3 DNA binding domain^19-107^E:6.9e-12",".",".","ENOG410YD7W^B3 domain-containing protein","KEGG:osa:4324291","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN44602_c0_g2","roots S.abrotanoides","roots S. yangii",1.10067936691304,{"v":4635039632.89228,"d":"4.64E+09"},"0.000113802849193887","TRINITY_DN44602_c0_g2_i6","POT6_ARATH^POT6_ARATH^Q:509-2836,H:1-782^74.81%ID^E:0^RecName: Full=Potassium transporter 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44602_c0_g2_i6.p1","509-2839[+]","POT6_ARATH^POT6_ARATH^Q:1-776,H:1-782^74.81%ID^E:0^RecName: Full=Potassium transporter 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02705.13^K_trans^K+ potassium transporter^25-602^E:1.1e-193",".",".","COG3158^Transport of potassium into the cell (By similarity)","KEGG:ath:AT1G70300`KO:K03549","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015079^molecular_function^potassium ion transmembrane transporter activity","GO:0015079^molecular_function^potassium ion transmembrane transporter activity`GO:0071805^biological_process^potassium ion transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46626_c0_g5","roots S.abrotanoides","roots S. yangii",1.09857111184164,"0.00784760866664679","0.0138893777087565","TRINITY_DN46626_c0_g5_i3","Y5262_ARATH^Y5262_ARATH^Q:153-719,H:60-248^30.69%ID^E:2e-21^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46626_c0_g5_i3.p1","3-764[+]","Y5262_ARATH^Y5262_ARATH^Q:51-239,H:60-248^30.69%ID^E:5e-23^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5262_ARATH^Y5262_ARATH^Q:118-239,H:19-146^27.34%ID^E:4e-06^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^52-136^E:1.2e-06`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^86-174^E:1e-10`PF13637.3^Ank_4^Ankyrin repeats (many copies)^118-167^E:7.3e-05`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^149-206^E:1.5e-07`PF13606.3^Ank_3^Ankyrin repeat^149-174^E:0.0029`PF13637.3^Ank_4^Ankyrin repeats (many copies)^151-204^E:3.4e-06`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^155-240^E:2.9e-15`PF13637.3^Ank_4^Ankyrin repeats (many copies)^186-238^E:8e-07`PF13606.3^Ank_3^Ankyrin repeat^217-240^E:4.9e-05`PF00023.27^Ank^Ankyrin repeat^217-238^E:0.0021",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT5G02620","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN22634_c0_g1","roots S.abrotanoides","roots S. yangii",1.0915125639831,"0.000455085864466561","0.000982578945913003","TRINITY_DN22634_c0_g1_i1","LBD1_ARATH^LBD1_ARATH^Q:794-315,H:29-189^68.9%ID^E:1e-62^RecName: Full=LOB domain-containing protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22634_c0_g1_i1.p1","312-923[-]","LBD1_ARATH^LBD1_ARATH^Q:44-203,H:29-189^68.9%ID^E:3e-73^RecName: Full=LOB domain-containing protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03195.11^DUF260^Protein of unknown function DUF260^48-145^E:5.7e-43",".",".","ENOG410YHTF^lob domain-containing protein","KEGG:ath:AT1G07900","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN44314_c5_g2","roots S.abrotanoides","roots S. yangii",1.08853363026128,"0.000141652983711241","0.000326561552630015","TRINITY_DN44314_c5_g2_i1","Y2559_ARATH^Y2559_ARATH^Q:2354-528,H:52-657^49.54%ID^E:1e-156^RecName: Full=Receptor-like serine/threonine-protein kinase At2g45590;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44314_c5_g2_i1.p1","447-2444[-]","Y2559_ARATH^Y2559_ARATH^Q:1-665,H:10-683^50.9%ID^E:0^RecName: Full=Receptor-like serine/threonine-protein kinase At2g45590;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^69-246^E:4e-28`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^70-243^E:6e-22`PF00069.22^Pkinase^Protein kinase domain^520-633^E:6.2e-09`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^521-635^E:5.7e-06",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G45590","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47305_c1_g11","roots S.abrotanoides","roots S. yangii",1.08784992810577,"0.0176491606236378","0.029164066295172","TRINITY_DN47305_c1_g11_i1","IRKI_ARATH^IRKI_ARATH^Q:1151-618,H:386-554^25.82%ID^E:1e-05^RecName: Full=IRK-interacting protein {ECO:0000303|PubMed:15618632};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47305_c1_g11_i1.p1","579-1922[-]","IRKI_ARATH^IRKI_ARATH^Q:151-435,H:272-554^22.97%ID^E:6e-09^RecName: Full=IRK-interacting protein {ECO:0000303|PubMed:15618632};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04859.9^DUF641^Plant protein of unknown function (DUF641)^60-185^E:6.4e-43",".",".","ENOG410Y9VT^expressed protein","KEGG:ath:AT5G12900",".",".",".","."]
["TRINITY_DN32666_c0_g1","roots S.abrotanoides","roots S. yangii",1.08783507952402,"0.00917787131636041","0.0160351004349757","TRINITY_DN32666_c0_g1_i1","BH036_ARATH^BH036_ARATH^Q:344-793,H:2-109^30.97%ID^E:4e-14^RecName: Full=Transcription factor bHLH36;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32666_c0_g1_i1.p1","581-1012[+]","BH126_ARATH^BH126_ARATH^Q:2-135,H:78-215^30%ID^E:2e-11^RecName: Full=Transcription factor bHLH126;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG41114KF^Transcription factor","KEGG:ath:AT4G25410","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46743_c2_g3","roots S.abrotanoides","roots S. yangii",1.0859405365692,"0.00276755744221976","0.00530918795009011","TRINITY_DN46743_c2_g3_i1","E13B_PRUPE^E13B_PRUPE^Q:1184-177,H:40-349^45.99%ID^E:4e-92^RecName: Full=Glucan endo-1,3-beta-glucosidase, basic isoform;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN46743_c2_g3_i1.p1","171-1271[-]","BGNEM_ARATH^BGNEM_ARATH^Q:12-365,H:5-334^45.96%ID^E:2e-94^RecName: Full=Probable glucan endo-1,3-beta-glucosidase At4g16260 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^30-365^E:9e-91","sigP:1^28^0.752^YES",".","ENOG410YAHP^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT4G16260","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005615^cellular_component^extracellular space`GO:0005774^cellular_component^vacuolar membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0009817^biological_process^defense response to fungus, incompatible interaction`GO:0002215^biological_process^defense response to nematode`GO:0009651^biological_process^response to salt stress","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47299_c0_g3","roots S.abrotanoides","roots S. yangii",1.08045322067323,"0.00692094237295958","0.0123619542826097","TRINITY_DN47299_c0_g3_i4","Y4230_ARATH^Y4230_ARATH^Q:305-3,H:633-733^82.18%ID^E:8e-52^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47299_c0_g3_i4.p1","3-308[-]","Y4230_ARATH^Y4230_ARATH^Q:2-102,H:633-733^82.18%ID^E:7e-52^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^2-100^E:1.5e-26`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^2-99^E:1.2e-25",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G03230","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43952_c0_g1","roots S.abrotanoides","roots S. yangii",1.07693732061745,"0.000111823074171229","0.000260979662163239","TRINITY_DN43952_c0_g1_i2","DUR3_ARATH^DUR3_ARATH^Q:2515-356,H:3-703^73.66%ID^E:0^RecName: Full=Urea-proton symporter DUR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43952_c0_g1_i2.p1","329-1588[-]","DUR3_ARATH^DUR3_ARATH^Q:1-411,H:289-703^72.84%ID^E:0^RecName: Full=Urea-proton symporter DUR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00474.14^SSF^Sodium:solute symporter family^38-208^E:6.2e-11",".",".","COG0591^symporter","KEGG:ath:AT5G45380","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015293^molecular_function^symporter activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0071918^biological_process^urea transmembrane transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN103512_c0_g1","roots S.abrotanoides","roots S. yangii",1.07518318402797,"0.00397700042099691","0.00742690607960666","TRINITY_DN103512_c0_g1_i1","MIZ1_ARATH^MIZ1_ARATH^Q:631-146,H:127-297^47.13%ID^E:2e-43^RecName: Full=Protein MIZU-KUSSEI 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN103512_c0_g1_i1.p1","143-850[-]","MIZ1_ARATH^MIZ1_ARATH^Q:74-235,H:127-297^47.13%ID^E:5e-44^RecName: Full=Protein MIZU-KUSSEI 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04759.10^DUF617^Protein of unknown function, DUF617^76-234^E:5.1e-55",".",".","ENOG4111IZ9^DUF617 domain containing protein","KEGG:ath:AT2G41660","GO:0032541^cellular_component^cortical endoplasmic reticulum`GO:0005737^cellular_component^cytoplasm`GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016020^cellular_component^membrane`GO:0009658^biological_process^chloroplast organization`GO:0010274^biological_process^hydrotropism",".",".","."]
["TRINITY_DN44540_c2_g2","roots S.abrotanoides","roots S. yangii",1.07357750070355,"0.0213552200610453","0.0347375096772235","TRINITY_DN44540_c2_g2_i1",".",".","TRINITY_DN44540_c2_g2_i1.p1","279-854[-]","LHWL1_ARATH^LHWL1_ARATH^Q:50-170,H:3-97^29.84%ID^E:4e-06^RecName: Full=Transcription factor EMB1444;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14215.3^bHLH-MYC_N^bHLH-MYC and R2R3-MYB transcription factors N-terminal^52-175^E:6e-20",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0048364^biological_process^root development`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44114_c2_g2","roots S.abrotanoides","roots S. yangii",1.0719528558577,"0.0138008694247609","0.0233278942890045","TRINITY_DN44114_c2_g2_i2","PGP1B_ARATH^PGP1B_ARATH^Q:801-448,H:210-328^68.8%ID^E:1e-42^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PGP1B_ARATH^PGP1B_ARATH^Q:383-273,H:326-362^75.68%ID^E:1e-42^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44114_c2_g2_i2.p1","340-642[-]","PGP1B_ARATH^PGP1B_ARATH^Q:1-65,H:264-328^90.77%ID^E:1e-33^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13242.3^Hydrolase_like^HAD-hyrolase-like^16-66^E:8.4e-18`PF13419.3^HAD_2^Haloacid dehalogenase-like hydrolase^17-62^E:2e-05`PF09419.7^PGP_phosphatase^Mitochondrial PGP phosphatase^23-59^E:0.00026",".",".","COG0647^Hydrolase","KEGG:ath:AT5G36700`KEGG:ath:AT5G36790`KO:K19269","GO:0009507^cellular_component^chloroplast`GO:0008967^molecular_function^phosphoglycolate phosphatase activity`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN46930_c0_g1","roots S.abrotanoides","roots S. yangii",1.07094046827629,"0.000424117132245316","0.000919408549310759","TRINITY_DN46930_c0_g1_i9",".",".","TRINITY_DN46930_c0_g1_i9.p1","2-385[-]","DRL45_ARATH^DRL45_ARATH^Q:19-128,H:87-207^27.56%ID^E:2e-06^RecName: Full=Probable disease resistance protein RDL6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^90-127^E:3.6e-08",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G58848`KEGG:ath:AT1G59218","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44781_c3_g4","roots S.abrotanoides","roots S. yangii",1.06994392570826,"0.0285075993332615","0.0452394407321327","TRINITY_DN44781_c3_g4_i3","CESA7_ORYSJ^CESA7_ORYSJ^Q:133-978,H:769-1063^82.37%ID^E:4e-155^RecName: Full=Cellulose synthase A catalytic subunit 7 [UDP-forming];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44781_c3_g4_i3.p1","451-978[+]","CESA4_ARATH^CESA4_ARATH^Q:1-176,H:861-1049^83.07%ID^E:8e-102^RecName: Full=Cellulose synthase A catalytic subunit 4 [UDP-forming];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03552.11^Cellulose_synt^Cellulose synthase^1-169^E:2.8e-79","sigP:1^17^0.551^YES",".","COG1215^Glycosyl transferase, family 2","KEGG:ath:AT5G44030`KO:K10999","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0046872^molecular_function^metal ion binding`GO:0071555^biological_process^cell wall organization`GO:0030244^biological_process^cellulose biosynthetic process`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:0009834^biological_process^plant-type secondary cell wall biogenesis","GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0030244^biological_process^cellulose biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44390_c1_g2","roots S.abrotanoides","roots S. yangii",1.06916800572343,"0.00343392725833249","0.00648771103507747","TRINITY_DN44390_c1_g2_i1","DR206_PEA^DR206_PEA^Q:108-587,H:26-184^65%ID^E:7e-74^RecName: Full=Disease resistance response protein 206;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44390_c1_g2_i1.p1","39-590[+]","DR206_PEA^DR206_PEA^Q:1-183,H:1-184^60.54%ID^E:5e-78^RecName: Full=Disease resistance response protein 206;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF03018.11^Dirigent^Dirigent-like protein^30-177^E:2.7e-37","sigP:1^20^0.827^YES",".",".",".","GO:0048046^cellular_component^apoplast`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN45912_c2_g1","roots S.abrotanoides","roots S. yangii",1.0563339198378,"0.000141145078578745","0.000325417496540038","TRINITY_DN45912_c2_g1_i1","Y5977_ARATH^Y5977_ARATH^Q:278-3034,H:31-942^54.59%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45912_c2_g1_i1.p1","194-3058[+]","Y5977_ARATH^Y5977_ARATH^Q:17-947,H:19-942^54.32%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^633-899^E:5.6e-47`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^636-900^E:1.4e-47","sigP:1^22^0.848^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G49770","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47399_c4_g2","roots S.abrotanoides","roots S. yangii",1.05511296637525,"0.00103362666029672","0.00211269659951358","TRINITY_DN47399_c4_g2_i3","Y5262_ARATH^Y5262_ARATH^Q:781-170,H:192-413^23.79%ID^E:5e-06^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47399_c4_g2_i3.p1","2-895[-]","Y3236_ARATH^Y3236_ARATH^Q:39-293,H:265-520^22.63%ID^E:1e-07^RecName: Full=Ankyrin repeat-containing protein At3g12360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13962.3^PGG^Domain of unknown function^182-292^E:1.9e-16",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT3G12360","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0034613^biological_process^cellular protein localization`GO:0009651^biological_process^response to salt stress",".",".","."]
["TRINITY_DN44253_c0_g1","roots S.abrotanoides","roots S. yangii",1.05193185322098,"0.000568618301349544","0.00120985104767039","TRINITY_DN44253_c0_g1_i6","KNAT6_ARATH^KNAT6_ARATH^Q:905-114,H:7-275^53.6%ID^E:9e-66^RecName: Full=Homeobox protein knotted-1-like 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`KNAT6_ARATH^KNAT6_ARATH^Q:99-1,H:276-308^81.82%ID^E:9e-66^RecName: Full=Homeobox protein knotted-1-like 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44253_c0_g1_i6.p1","93-860[-]","KNAT6_ARATH^KNAT6_ARATH^Q:1-249,H:21-275^59.32%ID^E:2e-88^RecName: Full=Homeobox protein knotted-1-like 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03790.10^KNOX1^KNOX1 domain^70-110^E:1.4e-20`PF03791.10^KNOX2^KNOX2 domain^123-168^E:1.7e-24`PF03789.10^ELK^ELK domain^198-219^E:8.3e-05",".",".","ENOG410XPMQ^homeobox","KEGG:ath:AT1G23380","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010073^biological_process^meristem maintenance`GO:0006355^biological_process^regulation of transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN43866_c3_g1","roots S.abrotanoides","roots S. yangii",1.04999196635339,"0.00035644463647497","0.000780702327173092","TRINITY_DN43866_c3_g1_i10","CAX5_ARATH^CAX5_ARATH^Q:2109-1249,H:125-404^54.86%ID^E:2e-70^RecName: Full=Vacuolar cation/proton exchanger 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CAX5_ARATH^CAX5_ARATH^Q:735-523,H:369-439^77.46%ID^E:2e-26^RecName: Full=Vacuolar cation/proton exchanger 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CAX5_ARATH^CAX5_ARATH^Q:3595-3212,H:8-129^42.97%ID^E:7e-18^RecName: Full=Vacuolar cation/proton exchanger 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43866_c3_g1_i10.p1","1390-2052[-]","CAX5_ARATH^CAX5_ARATH^Q:1-206,H:144-350^71.01%ID^E:2e-96^RecName: Full=Vacuolar cation/proton exchanger 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^3-110^E:8.7e-09`PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^145-207^E:8.7e-06",".",".","COG0387^Calcium Proton","KEGG:ath:AT1G55730`KO:K07300","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015369^molecular_function^calcium:proton antiporter activity","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN8456_c0_g1","roots S.abrotanoides","roots S. yangii",1.04731551430827,"0.00010327183355808","0.000242114306212982","TRINITY_DN8456_c0_g1_i1","ARFR_ORYSJ^ARFR_ORYSJ^Q:71-1222,H:299-699^54.09%ID^E:2e-124^RecName: Full=Auxin response factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN8456_c0_g1_i1.p1","2-1228[+]","ARFR_ORYSJ^ARFR_ORYSJ^Q:4-406,H:279-698^54.5%ID^E:1e-140^RecName: Full=Auxin response factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF06507.10^Auxin_resp^Auxin response factor^17-100^E:6.1e-32",".",".","ENOG410ZZ2C^auxin response factor","KEGG:osa:4341882","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009725^biological_process^response to hormone`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN43713_c2_g2","roots S.abrotanoides","roots S. yangii",1.04650986067367,"0.00792826478166141","0.0140222589102672","TRINITY_DN43713_c2_g2_i1","MAVI_CUCPE^MAVI_CUCPE^Q:579-262,H:3-108^49.06%ID^E:1e-31^RecName: Full=Mavicyanin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita",".","TRINITY_DN43713_c2_g2_i1.p1","118-636[-]","MAVI_CUCPE^MAVI_CUCPE^Q:20-125,H:3-108^49.06%ID^E:3e-33^RecName: Full=Mavicyanin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita","PF02298.14^Cu_bind_like^Plastocyanin-like domain^29-112^E:4.6e-30","sigP:1^18^0.754^YES",".",".",".","GO:0009055^molecular_function^electron carrier activity`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process","GO:0009055^molecular_function^electron carrier activity",".","."]
["TRINITY_DN46093_c3_g1","roots S.abrotanoides","roots S. yangii",1.04085968361513,"0.00554363364282426","0.0100836317696864","TRINITY_DN46093_c3_g1_i8","R1B19_SOLDE^R1B19_SOLDE^Q:543-307,H:819-898^40%ID^E:6e-10^RecName: Full=Putative late blight resistance protein homolog R1B-19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46093_c3_g1_i8.p1","1-543[-]","R1B12_SOLDE^R1B12_SOLDE^Q:1-174,H:844-1031^29.53%ID^E:1e-11^RecName: Full=Putative late blight resistance protein homolog R1B-12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46173_c2_g1","roots S.abrotanoides","roots S. yangii",1.04066414594531,"0.0313664757641756","0.0493780325272878","TRINITY_DN46173_c2_g1_i3","CDC2_MAIZE^CDC2_MAIZE^Q:2050-1175,H:2-290^42.42%ID^E:1e-66^RecName: Full=Cell division control protein 2 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea`CDC2_MAIZE^CDC2_MAIZE^Q:1153-275,H:2-290^41.55%ID^E:9e-64^RecName: Full=Cell division control protein 2 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN46173_c2_g1_i3.p1","266-2089[-]","CDC2_MAIZE^CDC2_MAIZE^Q:313-605,H:2-290^41.55%ID^E:2e-68^RecName: Full=Cell division control protein 2 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea`CDC2_MAIZE^CDC2_MAIZE^Q:14-305,H:2-290^42.42%ID^E:1e-67^RecName: Full=Cell division control protein 2 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF00069.22^Pkinase^Protein kinase domain^21-302^E:1.7e-61`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^22-235^E:1e-28`PF00069.22^Pkinase^Protein kinase domain^318-602^E:4e-61`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^318-540^E:5.7e-28",".",".","ENOG410XPP3^Cyclin-Dependent Kinase","KEGG:zma:542270`KO:K02206","GO:0005524^molecular_function^ATP binding`GO:0004693^molecular_function^cyclin-dependent protein serine/threonine kinase activity`GO:0008353^molecular_function^RNA polymerase II carboxy-terminal domain kinase activity`GO:0051301^biological_process^cell division`GO:0007067^biological_process^mitotic nuclear division","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43441_c4_g6","roots S.abrotanoides","roots S. yangii",1.03912355296773,"0.00118216761502139","0.00239945847241848","TRINITY_DN43441_c4_g6_i1","QKY_ARATH^QKY_ARATH^Q:1199-3511,H:289-1081^76.1%ID^E:0^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`QKY_ARATH^QKY_ARATH^Q:509-907,H:17-149^75.94%ID^E:4e-58^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43441_c4_g6_i1.p1","452-3514[+]","QKY_ARATH^QKY_ARATH^Q:8-1020,H:5-1081^68.14%ID^E:0^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^21-116^E:6.4e-20`PF00168.27^C2^C2 domain^293-395^E:1.4e-06`PF00168.27^C2^C2 domain^453-562^E:4.8e-07`PF00168.27^C2^C2 domain^608-719^E:8.7e-23`PF08372.7^PRT_C^Plant phosphoribosyltransferase C-terminal^865-1020^E:2.2e-69",".",".","ENOG410Y912^Plant phosphoribosyltransferase C-terminal","KEGG:ath:AT1G74720","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005509^molecular_function^calcium ion binding`GO:0005544^molecular_function^calcium-dependent phospholipid binding`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0048513^biological_process^animal organ development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN42655_c0_g2","roots S.abrotanoides","roots S. yangii",1.03716105965368,"0.00469592164726133","0.00865677232080434","TRINITY_DN42655_c0_g2_i1","C90D2_ORYSJ^C90D2_ORYSJ^Q:380-3,H:41-166^64.57%ID^E:4e-50^RecName: Full=Cytochrome P450 90D2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42655_c0_g2_i1.p1","3-614[-]","C90D2_ORYSJ^C90D2_ORYSJ^Q:79-204,H:41-166^64.57%ID^E:3e-50^RecName: Full=Cytochrome P450 90D2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".",".",".","COG2124^Cytochrome p450","KEGG:osa:4327329`KO:K09589","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0010268^biological_process^brassinosteroid homeostasis`GO:0007275^biological_process^multicellular organism development`GO:0016125^biological_process^sterol metabolic process",".",".","."]
["TRINITY_DN45253_c4_g9","roots S.abrotanoides","roots S. yangii",1.03462248198151,{"v":4375343987.48219,"d":"4.38E+09"},"0.00010773903794328","TRINITY_DN45253_c4_g9_i1","G3P_ATRNU^G3P_ATRNU^Q:197-1195,H:1-333^90.99%ID^E:0^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Atripliceae; Atriplex",".","TRINITY_DN45253_c4_g9_i1.p1","197-1210[+]","G3PC_PETCR^G3PC_PETCR^Q:3-337,H:2-336^91.94%ID^E:0^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; apioid superclade; Apieae; Petroselinum","PF00044.21^Gp_dh_N^Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain^4-154^E:4.1e-54`PF02800.17^Gp_dh_C^Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain^159-316^E:1.5e-71",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0004365^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity`GO:0051287^molecular_function^NAD binding`GO:0050661^molecular_function^NADP binding`GO:0006006^biological_process^glucose metabolic process`GO:0006096^biological_process^glycolytic process","GO:0016620^molecular_function^oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN42626_c1_g1","roots S.abrotanoides","roots S. yangii",1.02639682796539,"0.0205085404865798","0.0334811060318742","TRINITY_DN42626_c1_g1_i1","E1311_ARATH^E1311_ARATH^Q:1709-762,H:32-349^51.57%ID^E:1e-111^RecName: Full=Glucan endo-1,3-beta-glucosidase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42626_c1_g1_i1.p1","579-1805[-]","E1311_ARATH^E1311_ARATH^Q:29-349,H:28-350^51.39%ID^E:1e-122^RecName: Full=Glucan endo-1,3-beta-glucosidase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^30-346^E:1.3e-88",".",".","ENOG410YA4N^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT1G32860","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005886^cellular_component^plasma membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN26591_c0_g1","roots S.abrotanoides","roots S. yangii",1.02440974890454,"0.00564668652173728","0.0102537250993606","TRINITY_DN26591_c0_g1_i2","BGNEM_ARATH^BGNEM_ARATH^Q:942-16,H:19-322^43.87%ID^E:5e-72^RecName: Full=Probable glucan endo-1,3-beta-glucosidase At4g16260 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN26591_c0_g1_i2.p1","1-1002[-]","BGNEM_ARATH^BGNEM_ARATH^Q:3-329,H:1-322^43.29%ID^E:4e-82^RecName: Full=Probable glucan endo-1,3-beta-glucosidase At4g16260 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^26-332^E:2.4e-86","sigP:1^23^0.852^YES",".","ENOG410YAHP^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT4G16260","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005615^cellular_component^extracellular space`GO:0005774^cellular_component^vacuolar membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0009817^biological_process^defense response to fungus, incompatible interaction`GO:0002215^biological_process^defense response to nematode`GO:0009651^biological_process^response to salt stress","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47101_c0_g4","roots S.abrotanoides","roots S. yangii",1.02317269811294,"0.00128754170770889","0.00259936436814263","TRINITY_DN47101_c0_g4_i1","LAC14_ARATH^LAC14_ARATH^Q:184-1251,H:218-569^51.94%ID^E:5e-118^RecName: Full=Laccase-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47101_c0_g4_i1.p1","247-1254[+]","LAC14_ARATH^LAC14_ARATH^Q:1-335,H:239-569^51.33%ID^E:2e-114^RecName: Full=Laccase-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00394.19^Cu-oxidase^Multicopper oxidase^3-80^E:6.1e-17`PF07731.11^Cu-oxidase_2^Multicopper oxidase^208-318^E:4.3e-41",".",".","COG2132^Multicopper oxidase","KEGG:ath:AT5G09360`KO:K05909","GO:0048046^cellular_component^apoplast`GO:0005507^molecular_function^copper ion binding`GO:0052716^molecular_function^hydroquinone:oxygen oxidoreductase activity`GO:0016722^molecular_function^oxidoreductase activity, oxidizing metal ions`GO:0009809^biological_process^lignin biosynthetic process`GO:0046274^biological_process^lignin catabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0005507^molecular_function^copper ion binding",".","."]
["TRINITY_DN47216_c1_g1","roots S.abrotanoides","roots S. yangii",1.01879222999452,"0.00448169726948029","0.00829676693874967","TRINITY_DN47216_c1_g1_i6","NUD17_ARATH^NUD17_ARATH^Q:759-331,H:28-171^60.27%ID^E:1e-53^RecName: Full=Nudix hydrolase 17, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47216_c1_g1_i6.p1","280-717[-]","NUD17_ARATH^NUD17_ARATH^Q:5-129,H:45-171^65.62%ID^E:2e-54^RecName: Full=Nudix hydrolase 17, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00293.25^NUDIX^NUDIX domain^7-116^E:8.2e-13",".",".","COG0494^Nudix hydrolase","KEGG:ath:AT2G01670","GO:0005739^cellular_component^mitochondrion`GO:0016787^molecular_function^hydrolase activity`GO:0046872^molecular_function^metal ion binding","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN30566_c0_g1","roots S.abrotanoides","roots S. yangii",1.01821333265732,"0.00229708439885307","0.00445913599311262","TRINITY_DN30566_c0_g1_i1","PSF2_ARATH^PSF2_ARATH^Q:1180-548,H:1-210^64.62%ID^E:1e-76^RecName: Full=DNA replication complex GINS protein PSF2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN30566_c0_g1_i1.p1","545-1180[-]","PSF2_ARATH^PSF2_ARATH^Q:1-211,H:1-210^64.62%ID^E:6e-92^RecName: Full=DNA replication complex GINS protein PSF2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05916.8^Sld5^GINS complex protein^54-162^E:4.3e-21",".",".","COG5093^DNA replication complex GINS protein psf2","KEGG:ath:AT3G12530`KO:K10733","GO:0000811^cellular_component^GINS complex`GO:0031298^cellular_component^replication fork protection complex`GO:0032508^biological_process^DNA duplex unwinding`GO:0000727^biological_process^double-strand break repair via break-induced replication`GO:1902975^biological_process^mitotic DNA replication initiation",".",".","."]
["TRINITY_DN44817_c4_g1","roots S.abrotanoides","roots S. yangii",1.0128063839882,"0.0224918630330219","0.0364126047282963","TRINITY_DN44817_c4_g1_i4","LCYE_ARATH^LCYE_ARATH^Q:1877-273,H:1-524^76.07%ID^E:0^RecName: Full=Lycopene epsilon cyclase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44817_c4_g1_i4.p1","270-2117[-]","LCYE_ARATH^LCYE_ARATH^Q:81-615,H:1-524^76.07%ID^E:0^RecName: Full=Lycopene epsilon cyclase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05834.9^Lycopene_cycl^Lycopene cyclase protein^195-592^E:1.1e-154",".",".","ENOG410XPIY^lycopene","KEGG:ath:AT5G57030`KO:K06444","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0045435^molecular_function^lycopene epsilon cyclase activity`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0044550^biological_process^secondary metabolite biosynthetic process`GO:0016123^biological_process^xanthophyll biosynthetic process","GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0016117^biological_process^carotenoid biosynthetic process",".","."]
["TRINITY_DN43860_c5_g6","roots S.abrotanoides","roots S. yangii",1.01136197381841,"0.00482543499803193","0.00887431575594091","TRINITY_DN43860_c5_g6_i1","DOF15_ARATH^DOF15_ARATH^Q:87-575,H:6-175^60.34%ID^E:3e-56^RecName: Full=Dof zinc finger protein DOF1.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43860_c5_g6_i1.p1","60-578[+]","DOF15_ARATH^DOF15_ARATH^Q:10-172,H:6-175^60.92%ID^E:4e-59^RecName: Full=Dof zinc finger protein DOF1.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02701.12^zf-Dof^Dof domain, zinc finger^54-109^E:4.6e-32",".",".","ENOG4111564^Dof-type zinc finger domain-containing protein","KEGG:ath:AT1G29160","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46705_c0_g7","roots S.abrotanoides","roots S. yangii",1.00947732172152,"0.000461339107262487","0.000995311249789294","TRINITY_DN46705_c0_g7_i2","CXE17_ARATH^CXE17_ARATH^Q:941-345,H:97-308^42.06%ID^E:2e-39^RecName: Full=Probable carboxylesterase 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46705_c0_g7_i2.p1","234-1130[-]","CXE17_ARATH^CXE17_ARATH^Q:3-296,H:28-342^36.68%ID^E:9e-56^RecName: Full=Probable carboxylesterase 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10340.6^DUF2424^Protein of unknown function (DUF2424)^55-184^E:4.8e-08`PF00135.25^COesterase^Carboxylesterase family^55-154^E:5.6e-06`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^62-275^E:1.8e-52",".",".","COG0657^alpha beta hydrolase fold-3 domain protein","KEGG:ath:AT5G16080","GO:0052689^molecular_function^carboxylic ester hydrolase activity","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46496_c4_g2","roots S.abrotanoides","roots S. yangii",1.00912538076284,{"v":428255416.43733,"d":"4.28E+08"},"0.000105537877850374","TRINITY_DN46496_c4_g2_i1","PSYR1_ARATH^PSYR1_ARATH^Q:486-3548,H:40-1077^54.97%ID^E:0^RecName: Full=Tyrosine-sulfated glycopeptide receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46496_c4_g2_i1.p1","426-3602[+]","PSYR1_ARATH^PSYR1_ARATH^Q:12-1041,H:30-1077^54.83%ID^E:0^RecName: Full=Tyrosine-sulfated glycopeptide receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^33-67^E:3.1e-05`PF13516.3^LRR_6^Leucine Rich repeat^192-208^E:1.5`PF00560.30^LRR_1^Leucine Rich Repeat^194-214^E:0.79`PF13855.3^LRR_8^Leucine rich repeat^244-303^E:1.1e-07`PF00560.30^LRR_1^Leucine Rich Repeat^268-288^E:0.84`PF13855.3^LRR_8^Leucine rich repeat^446-505^E:1.3e-09`PF00560.30^LRR_1^Leucine Rich Repeat^603-625^E:0.025`PF00069.22^Pkinase^Protein kinase domain^771-1036^E:9.2e-44`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^772-1036^E:4.4e-43","sigP:1^27^0.753^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT1G72300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0001653^molecular_function^peptide receptor activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0004888^molecular_function^transmembrane signaling receptor activity`GO:0045851^biological_process^pH reduction`GO:0007165^biological_process^signal transduction`GO:0009826^biological_process^unidimensional cell growth","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46223_c5_g3","roots S.abrotanoides","roots S. yangii",1.00568565417418,{"v":6065941708.06327,"d":"6.07E+09"},"0.000146476948634514","TRINITY_DN46223_c5_g3_i3","PPH_ARATH^PPH_ARATH^Q:342-1769,H:1-476^56.82%ID^E:0^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46223_c5_g3_i3.p1","342-1781[+]","PPH_ARATH^PPH_ARATH^Q:1-476,H:1-476^56.82%ID^E:0^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^125-400^E:3.7e-13`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^127-406^E:9.3e-19`PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^127-373^E:2.9e-07",".",".","COG0596^Alpha beta hydrolase","KEGG:ath:AT5G13800","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0080124^molecular_function^pheophytinase activity`GO:0015996^biological_process^chlorophyll catabolic process",".",".","."]
["TRINITY_DN36690_c0_g1","roots S.abrotanoides","roots S. yangii",1.00477442626205,"0.00339334052111188","0.00641758003928435","TRINITY_DN36690_c0_g1_i2","LAT52_SOLLC^LAT52_SOLLC^Q:98-568,H:1-161^52.8%ID^E:2e-50^RecName: Full=Anther-specific protein LAT52;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN36690_c0_g1_i2.p1","98-574[+]","LAT52_SOLLC^LAT52_SOLLC^Q:1-157,H:1-161^52.8%ID^E:2e-52^RecName: Full=Anther-specific protein LAT52;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF01190.14^Pollen_Ole_e_I^Pollen proteins Ole e I like^25-106^E:6.3e-17","sigP:1^19^0.898^YES",".","ENOG410ZND9^pollen Ole e 1 allergen and extensin family protein","KEGG:sly:101261755","GO:0005615^cellular_component^extracellular space",".",".","."]
["TRINITY_DN14514_c0_g1","roots S.abrotanoides","roots S. yangii",1.00199384490267,"0.000347916587903062","0.000763400139987394","TRINITY_DN14514_c0_g1_i2","NPC3_ARATH^NPC3_ARATH^Q:1789-611,H:15-407^69.44%ID^E:0^RecName: Full=Non-specific phospholipase C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NPC3_ARATH^NPC3_ARATH^Q:564-205,H:398-521^38.71%ID^E:4e-14^RecName: Full=Non-specific phospholipase C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN14514_c0_g1_i2.p1","539-1813[-]","NPC3_ARATH^NPC3_ARATH^Q:9-401,H:15-407^69.44%ID^E:0^RecName: Full=Non-specific phospholipase C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04185.11^Phosphoesterase^Phosphoesterase family^10-375^E:4.1e-103",".",".","COG3511^phospholipase C","KEGG:ath:AT3G03520`KO:K01114","GO:0016020^cellular_component^membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0052642^molecular_function^lysophosphatidic acid phosphatase activity`GO:0016036^biological_process^cellular response to phosphate starvation`GO:0016311^biological_process^dephosphorylation`GO:0006796^biological_process^phosphate-containing compound metabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN36307_c0_g1","roots S.abrotanoides","roots S. yangii",-1.00454842390235,"0.0226278356168811","0.0366030426081906","TRINITY_DN36307_c0_g1_i1","RL6_MESCR^RL6_MESCR^Q:795-340,H:13-152^55.26%ID^E:2e-42^RecName: Full=60S ribosomal protein L6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum`RL6_MESCR^RL6_MESCR^Q:177-28,H:182-234^54.72%ID^E:2e-06^RecName: Full=60S ribosomal protein L6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum",".","TRINITY_DN36307_c0_g1_i1.p1","25-831[-]","RL6_MESCR^RL6_MESCR^Q:13-268,H:13-234^48.65%ID^E:8e-61^RecName: Full=60S ribosomal protein L6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum","PF01159.16^Ribosomal_L6e^Ribosomal protein L6e^139-268^E:1.1e-32",".",".",".",".","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46942_c0_g6","roots S.abrotanoides","roots S. yangii",-1.00510416094969,"0.00686256029115603","0.0122678692959175","TRINITY_DN46942_c0_g6_i2","R1A6_SOLDE^R1A6_SOLDE^Q:5-343,H:623-736^42.98%ID^E:1e-20^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46942_c0_g6_i2.p1","38-346[+]","R1A6_SOLDE^R1A6_SOLDE^Q:1-102,H:634-736^43.69%ID^E:9e-20^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-100^E:1.1e-27",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44136_c0_g1","roots S.abrotanoides","roots S. yangii",-1.01606955004553,"0.00210920254695524","0.00411774932675212","TRINITY_DN44136_c0_g1_i2","PRPX_HORVU^PRPX_HORVU^Q:865-155,H:1-234^51.46%ID^E:3e-78^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN44136_c0_g1_i2.p1","149-865[-]","PRPX_HORVU^PRPX_HORVU^Q:1-237,H:1-234^51.46%ID^E:4e-80^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".",".",".","ENOG410YA3P^NA",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN44868_c5_g4","roots S.abrotanoides","roots S. yangii",-1.02263855725352,"0.0153318204726204","0.0256610995462732","TRINITY_DN44868_c5_g4_i1","PIN8_ARATH^PIN8_ARATH^Q:65-1168,H:1-351^54.89%ID^E:1e-124^RecName: Full=Putative auxin efflux carrier component 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44868_c5_g4_i1.p1","104-1171[+]","PIN8_ARATH^PIN8_ARATH^Q:1-355,H:14-351^54.65%ID^E:7e-138^RecName: Full=Putative auxin efflux carrier component 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03547.15^Mem_trans^Membrane transport protein^1-348^E:9e-89",".",".","ENOG410YAQ9^auxin efflux carrier component","KEGG:ath:AT5G16530`KO:K13947","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0010329^molecular_function^auxin efflux transmembrane transporter activity`GO:0080161^molecular_function^auxin transmembrane transporter activity`GO:0010315^biological_process^auxin efflux`GO:0010252^biological_process^auxin homeostasis`GO:0009926^biological_process^auxin polar transport`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0080162^biological_process^intracellular auxin transport`GO:0009555^biological_process^pollen development","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45894_c3_g4","roots S.abrotanoides","roots S. yangii",-1.0242504539094,"0.0197696621434121","0.0323694186902477","TRINITY_DN45894_c3_g4_i1","PP256_ARATH^PP256_ARATH^Q:2071-71,H:32-700^55.37%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g26540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45894_c3_g4_i1.p1","35-2170[-]","PP256_ARATH^PP256_ARATH^Q:34-700,H:32-700^55.37%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g26540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^104-127^E:0.0075`PF01535.17^PPR^PPR repeat^131-160^E:9.2e-08`PF13041.3^PPR_2^PPR repeat family^131-174^E:2e-07`PF01535.17^PPR^PPR repeat^231-261^E:0.00061`PF01535.17^PPR^PPR repeat^303-324^E:0.049`PF12854.4^PPR_1^PPR repeat^327-357^E:8.2e-07`PF01535.17^PPR^PPR repeat^332-360^E:7.9e-08`PF01535.17^PPR^PPR repeat^363-391^E:0.00024`PF01535.17^PPR^PPR repeat^436-459^E:0.17`PF13041.3^PPR_2^PPR repeat family^463-510^E:8.3e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^463-510^E:0.003`PF01535.17^PPR^PPR repeat^465-491^E:1.7e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^564-611^E:0.0031`PF01535.17^PPR^PPR repeat^568-594^E:0.056`PF01535.17^PPR^PPR repeat^602-630^E:0.18",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G26540",".",".",".","."]
["TRINITY_DN47081_c2_g1","roots S.abrotanoides","roots S. yangii",-1.02431829478766,{"v":8904525001.45843,"d":"8.90E+09"},"0.000210402818660254","TRINITY_DN47081_c2_g1_i2","PP307_ARATH^PP307_ARATH^Q:434-3412,H:66-1064^54.08%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47081_c2_g1_i2.p1","398-3415[+]","PP307_ARATH^PP307_ARATH^Q:13-1005,H:66-1064^54.08%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^166-192^E:0.013`PF01535.17^PPR^PPR repeat^195-225^E:0.0012`PF01535.17^PPR^PPR repeat^266-293^E:0.00047`PF12854.4^PPR_1^PPR repeat^293-322^E:2.5e-05`PF13041.3^PPR_2^PPR repeat family^294-340^E:5.9e-09`PF01535.17^PPR^PPR repeat^296-323^E:5.2e-05`PF13041.3^PPR_2^PPR repeat family^395-441^E:1e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^395-441^E:0.00025`PF01535.17^PPR^PPR repeat^397-427^E:0.0002`PF13812.3^PPR_3^Pentatricopeptide repeat domain^459-497^E:0.00029`PF12854.4^PPR_1^PPR repeat^461-491^E:2.5e-05`PF01535.17^PPR^PPR repeat^468-496^E:0.0006`PF13041.3^PPR_2^PPR repeat family^496-533^E:1.9e-10`PF12854.4^PPR_1^PPR repeat^496-524^E:1.8e-05`PF01535.17^PPR^PPR repeat^498-528^E:3.4e-10`PF01535.17^PPR^PPR repeat^571-596^E:0.053`PF12854.4^PPR_1^PPR repeat^593-625^E:9.8e-06`PF13041.3^PPR_2^PPR repeat family^597-642^E:2.2e-09`PF01535.17^PPR^PPR repeat^599-628^E:2e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^599-642^E:0.0046`PF01535.17^PPR^PPR repeat^670-698^E:0.0023`PF13041.3^PPR_2^PPR repeat family^697-745^E:6.4e-11`PF01535.17^PPR^PPR repeat^700-725^E:2.6e-07`PF01535.17^PPR^PPR repeat^735-762^E:0.32`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^872-995^E:1e-33",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G13650",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN44372_c0_g2","roots S.abrotanoides","roots S. yangii",-1.0258808602635,"0.0035282499091439","0.0066529106972189","TRINITY_DN44372_c0_g2_i7","AHL1_ARATH^AHL1_ARATH^Q:639-331,H:182-286^53.33%ID^E:6e-24^RecName: Full=AT-hook motif nuclear-localized protein 1 {ECO:0000303|PubMed:15604740};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44372_c0_g2_i7.p1","660-1184[-]","AHL11_ARATH^AHL11_ARATH^Q:1-174,H:1-182^32.84%ID^E:2e-12^RecName: Full=AT-hook motif nuclear-localized protein 11 {ECO:0000312|EMBL:FAA00282.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02178.16^AT_hook^AT hook motif^94-103^E:1.2",".",".","ENOG410YDXW^AT hook motif domain containing protein, expressed","KEGG:ath:AT3G61310","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN46392_c0_g3","roots S.abrotanoides","roots S. yangii",-1.0268875222979,"0.000661405764033972","0.00139534524580801","TRINITY_DN46392_c0_g3_i1","RLP12_ARATH^RLP12_ARATH^Q:991-320,H:592-810^36.61%ID^E:2e-29^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:778-515,H:136-223^42.05%ID^E:3e-07^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:754-434,H:168-275^38.89%ID^E:5e-07^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46392_c0_g3_i1.p1","167-916[-]","RLP12_ARATH^RLP12_ARATH^Q:22-199,H:637-810^38.2%ID^E:2e-26^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:50-146,H:115-215^41.58%ID^E:6e-11^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:47-134,H:136-223^42.05%ID^E:2e-10^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:55-161,H:168-275^38.89%ID^E:9e-10^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:50-134,H:211-295^38.82%ID^E:3e-09^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:55-134,H:240-319^33.75%ID^E:2e-07^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:50-152,H:380-500^32.52%ID^E:1e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:50-134,H:472-557^38.37%ID^E:7e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^51-105^E:1.2e-07`PF13855.3^LRR_8^Leucine rich repeat^87-129^E:2.3e-06`PF13516.3^LRR_6^Leucine Rich repeat^95-107^E:0.34`PF00560.30^LRR_1^Leucine Rich Repeat^95-111^E:0.31",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G71400","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44987_c3_g10","roots S.abrotanoides","roots S. yangii",-1.02782370256518,"0.000110450825490912","0.000257949391093411","TRINITY_DN44987_c3_g10_i1","R1A6_SOLDE^R1A6_SOLDE^Q:2-1363,H:776-1230^27.5%ID^E:4e-17^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44987_c3_g10_i1.p1","122-1438[+]","R1A6_SOLDE^R1A6_SOLDE^Q:4-414,H:819-1230^27.23%ID^E:3e-17^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN28649_c0_g1","roots S.abrotanoides","roots S. yangii",-1.02924087911237,"0.0110710206720932","0.0190465727848628","TRINITY_DN28649_c0_g1_i1","ISE2_ARATH^ISE2_ARATH^Q:3980-795,H:121-1171^69.67%ID^E:0^RecName: Full=DExH-box ATP-dependent RNA helicase DExH15 chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28649_c0_g1_i1.p1","2499-4433[-]","ISE2_ARATH^ISE2_ARATH^Q:152-641,H:121-621^75.25%ID^E:0^RecName: Full=DExH-box ATP-dependent RNA helicase DExH15 chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00270.26^DEAD^DEAD/DEAH box helicase^189-341^E:4.1e-22`PF04851.12^ResIII^Type III restriction enzyme, res subunit^195-340^E:6.6e-09`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^533-594^E:3e-05",".",".","COG4581^helicase","KEGG:ath:AT1G70070","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0010494^cellular_component^cytoplasmic stress granule`GO:0005524^molecular_function^ATP binding`GO:0003723^molecular_function^RNA binding`GO:0003724^molecular_function^RNA helicase activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0031047^biological_process^gene silencing by RNA`GO:0000373^biological_process^Group II intron splicing`GO:0006397^biological_process^mRNA processing`GO:0010497^biological_process^plasmodesmata-mediated intercellular transport`GO:0016441^biological_process^posttranscriptional gene silencing","GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN35824_c0_g1","roots S.abrotanoides","roots S. yangii",-1.03236356142748,"0.0196208018394998","0.032159607215197","TRINITY_DN35824_c0_g1_i1","BIP5_TOBAC^BIP5_TOBAC^Q:12-1964,H:12-668^66.41%ID^E:0^RecName: Full=Luminal-binding protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN35824_c0_g1_i1.p1","3-1967[+]","BIP5_TOBAC^BIP5_TOBAC^Q:4-654,H:12-668^66.57%ID^E:0^RecName: Full=Luminal-binding protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00012.17^HSP70^Hsp70 protein^27-629^E:4.2e-254`PF06723.10^MreB_Mbl^MreB/Mbl protein^158-392^E:1.7e-16","sigP:1^18^0.841^YES",".",".",".","GO:0005788^cellular_component^endoplasmic reticulum lumen`GO:0005524^molecular_function^ATP binding","GO:0000902^biological_process^cell morphogenesis",".","."]
["TRINITY_DN71486_c0_g1","roots S.abrotanoides","roots S. yangii",-1.03545796135488,"0.0248772964237308","0.0399274248592948","TRINITY_DN71486_c0_g1_i1","ACP1_CASGL^ACP1_CASGL^Q:292-56,H:51-130^61.25%ID^E:3e-23^RecName: Full=Acyl carrier protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Casuarinaceae; Casuarina",".","TRINITY_DN71486_c0_g1_i1.p1","38-475[-]","ACP1_CASGL^ACP1_CASGL^Q:62-140,H:51-130^61.25%ID^E:1e-24^RecName: Full=Acyl carrier protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Casuarinaceae; Casuarina","PF00550.22^PP-binding^Phosphopantetheine attachment site^72-136^E:5.5e-12",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0006633^biological_process^fatty acid biosynthetic process",".",".","."]
["TRINITY_DN46443_c2_g3","roots S.abrotanoides","roots S. yangii",-1.03557861978878,"0.0234540114806237","0.0378365204838399","TRINITY_DN46443_c2_g3_i1","5MAT2_SALSN^5MAT2_SALSN^Q:1526-288,H:2-412^42.31%ID^E:2e-99^RecName: Full=Pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN46443_c2_g3_i1.p1","267-1565[-]","5MAT2_SALSN^5MAT2_SALSN^Q:14-426,H:2-412^42.31%ID^E:6e-105^RecName: Full=Pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF02458.12^Transferase^Transferase family^15-425^E:1.3e-64",".",".",".","KEGG:ag:AAR26385`KO:K12935","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0009718^biological_process^anthocyanin-containing compound biosynthetic process`GO:0043473^biological_process^pigmentation","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN37119_c0_g1","roots S.abrotanoides","roots S. yangii",-1.03651190053168,"0.0306613089425935","0.0483469318941876","TRINITY_DN37119_c0_g1_i1","ADPRM_ORYSJ^ADPRM_ORYSJ^Q:1182-232,H:2-319^64.15%ID^E:2e-154^RecName: Full=Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN37119_c0_g1_i1.p1","223-1182[-]","ADPRM_ORYSJ^ADPRM_ORYSJ^Q:1-317,H:2-319^64.15%ID^E:5e-157^RecName: Full=Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00149.25^Metallophos^Calcineurin-like phosphoesterase^53-264^E:4.7e-12",".",".","COG1409^Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes (By similarity)","KEGG:osa:4344352`KO:K01517","GO:0047631^molecular_function^ADP-ribose diphosphatase activity`GO:0047734^molecular_function^CDP-glycerol diphosphatase activity`GO:0046872^molecular_function^metal ion binding","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN42727_c0_g1","roots S.abrotanoides","roots S. yangii",-1.0394374888399,"0.000307096199015911","0.000678209423310681","TRINITY_DN42727_c0_g1_i2","RGA1_SOLBU^RGA1_SOLBU^Q:297-10,H:412-497^47.92%ID^E:5e-16^RecName: Full=Putative disease resistance protein RGA1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN42727_c0_g1_i2.p1","1-297[-]","RGA1_SOLBU^RGA1_SOLBU^Q:1-96,H:412-497^47.92%ID^E:2e-20^RecName: Full=Putative disease resistance protein RGA1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN44699_c3_g3","roots S.abrotanoides","roots S. yangii",-1.04118864095768,"0.0119219990839299","0.0203925666607949","TRINITY_DN44699_c3_g3_i1","TSS_ARATH^TSS_ARATH^Q:513-2768,H:1-750^65.45%ID^E:0^RecName: Full=Protein TSS {ECO:0000303|PubMed:21185286};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44699_c3_g3_i1.p1","513-2798[+]","TSS_ARATH^TSS_ARATH^Q:1-752,H:1-750^66.14%ID^E:0^RecName: Full=Protein TSS {ECO:0000303|PubMed:21185286};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF15044.3^CLU_N^Mitochondrial function, CLU-N-term^48-118^E:5.3e-13",".",".","ENOG410XQUQ^Involved in proper cytoplasmic distribution of mitochondria (By similarity)","KEGG:ath:AT4G28080`KO:K03255","GO:0007049^biological_process^cell cycle`GO:0007275^biological_process^multicellular organism development",".",".","."]
["TRINITY_DN44512_c1_g1","roots S.abrotanoides","roots S. yangii",-1.0532084816764,"0.0315748996872473","0.0496753531622397","TRINITY_DN44512_c1_g1_i2","DTX10_ARATH^DTX10_ARATH^Q:211-1005,H:5-267^50.19%ID^E:4e-137^RecName: Full=Protein DETOXIFICATION 10 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX10_ARATH^DTX10_ARATH^Q:1086-1697,H:269-472^64.22%ID^E:4e-137^RecName: Full=Protein DETOXIFICATION 10 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44512_c1_g1_i2.p1","220-1011[+]","DTX14_ARATH^DTX14_ARATH^Q:2-262,H:5-262^60.92%ID^E:2e-108^RecName: Full=Protein DETOXIFICATION 14 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^34-193^E:2.1e-29",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G71140`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44470_c2_g1","roots S.abrotanoides","roots S. yangii",-1.0624440192370601,"0.0237943764715435","0.0383397134081368","TRINITY_DN44470_c2_g1_i1","PAM68_ARATH^PAM68_ARATH^Q:189-641,H:56-207^78.95%ID^E:4e-41^RecName: Full=Protein PAM68, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44470_c2_g1_i1.p1","3-671[+]","PAM68_ARATH^PAM68_ARATH^Q:63-213,H:56-207^76.32%ID^E:2e-65^RecName: Full=Protein PAM68, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11947.5^DUF3464^Protein of unknown function (DUF3464)^82-212^E:5.2e-53",".",".","ENOG411261T^Protein of unknown function (DUF3464)","KEGG:ath:AT4G19100","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN44144_c5_g5","roots S.abrotanoides","roots S. yangii",-1.06288932289869,"0.0311505306160572","0.0490601981817967","TRINITY_DN44144_c5_g5_i1","ADT_PARKE^ADT_PARKE^Q:936-49,H:33-324^46.64%ID^E:2e-86^RecName: Full=ADP,ATP carrier protein;^Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellales incertae sedis; Parachlorella",".","TRINITY_DN44144_c5_g5_i1.p1","25-858[-]","ADT_PARKE^ADT_PARKE^Q:1-272,H:59-326^47.08%ID^E:4e-80^RecName: Full=ADP,ATP carrier protein;^Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellales incertae sedis; Parachlorella","PF00153.24^Mito_carr^Mitochondrial carrier protein^1-77^E:2.4e-13`PF00153.24^Mito_carr^Mitochondrial carrier protein^86-175^E:3e-21`PF00153.24^Mito_carr^Mitochondrial carrier protein^187-275^E:4.3e-13",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005215^molecular_function^transporter activity`GO:0055085^biological_process^transmembrane transport",".",".","."]
["TRINITY_DN87658_c0_g1","roots S.abrotanoides","roots S. yangii",-1.06515302957045,"0.0036826982648706","0.00692497962303987","TRINITY_DN87658_c0_g1_i1","PER1_ARAHY^PER1_ARAHY^Q:1082-132,H:1-316^58.18%ID^E:2e-124^RecName: Full=Cationic peroxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis",".","TRINITY_DN87658_c0_g1_i1.p1","129-1091[-]","PER1_ARAHY^PER1_ARAHY^Q:4-320,H:1-316^58.18%ID^E:4e-125^RecName: Full=Cationic peroxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis","PF00141.20^peroxidase^Peroxidase^45-283^E:2.5e-72","sigP:1^25^0.912^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45789_c1_g5","roots S.abrotanoides","roots S. yangii",-1.07091471224803,"0.00127254996226444","0.00257095578421047","TRINITY_DN45789_c1_g5_i1","C94A2_VICSA^C94A2_VICSA^Q:1638-718,H:29-339^45.08%ID^E:3e-103^RecName: Full=Cytochrome P450 94A2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Vicia`C94A2_VICSA^C94A2_VICSA^Q:661-452,H:352-421^57.14%ID^E:3e-103^RecName: Full=Cytochrome P450 94A2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Vicia`C94A2_VICSA^C94A2_VICSA^Q:473-201,H:415-510^41.67%ID^E:3e-103^RecName: Full=Cytochrome P450 94A2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Vicia",".","TRINITY_DN45789_c1_g5_i1.p2","335-1162[-]","C94A2_VICSA^C94A2_VICSA^Q:168-237,H:352-421^57.14%ID^E:5e-24^RecName: Full=Cytochrome P450 94A2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Vicia","PF00067.19^p450^Cytochrome P450^165-230^E:5.5e-10",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45943_c1_g1","roots S.abrotanoides","roots S. yangii",-1.07637760180553,{"v":469411135.50081,"d":"4.69E+08"},"0.000115202604629145","TRINITY_DN45943_c1_g1_i1","HSP22_IPONI^HSP22_IPONI^Q:250-717,H:1-167^65.87%ID^E:4e-52^RecName: Full=18.8 kDa class II heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN45943_c1_g1_i1.p1","250-723[+]","HSP22_IPONI^HSP22_IPONI^Q:1-156,H:1-167^67.66%ID^E:9e-59^RecName: Full=18.8 kDa class II heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF00011.18^HSP20^Hsp20/alpha crystallin family^51-153^E:1.1e-27",".",".",".",".","GO:0005737^cellular_component^cytoplasm",".",".","."]
["TRINITY_DN46034_c7_g1","roots S.abrotanoides","roots S. yangii",-1.07746635710466,"0.000528688398866854","0.00113066073882424","TRINITY_DN46034_c7_g1_i3","UBIQP_HORVU^UBIQP_HORVU^Q:336-1,H:42-153^97.32%ID^E:1e-72^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:231-1,H:1-77^97.4%ID^E:4e-46^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:336-178,H:118-170^98.11%ID^E:3e-29^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN46034_c7_g1_i3.p2","1-336[-]","UBIQP_HORVU^UBIQP_HORVU^Q:1-112,H:42-153^97.32%ID^E:9e-73^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:36-112,H:1-77^97.4%ID^E:4e-46^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:1-53,H:118-170^98.11%ID^E:3e-29^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum","PF00240.20^ubiquitin^Ubiquitin family^1-51^E:4.3e-23`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^1-46^E:0.057`PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^3-48^E:1.6e-09`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^17-48^E:0.13`PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^54-112^E:3.3e-13`PF00240.20^ubiquitin^Ubiquitin family^56-112^E:7.3e-27`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^62-111^E:0.087`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^64-99^E:0.00049",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47228_c0_g4","roots S.abrotanoides","roots S. yangii",-1.07777191391592,"0.0259505594510252","0.0415211923278415","TRINITY_DN47228_c0_g4_i1","WAKLA_ARATH^WAKLA_ARATH^Q:457-194,H:641-726^45.45%ID^E:1e-09^RecName: Full=Wall-associated receptor kinase-like 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47228_c0_g4_i1.p1","107-457[-]","WAKLA_ARATH^WAKLA_ARATH^Q:1-88,H:641-726^45.45%ID^E:2e-10^RecName: Full=Wall-associated receptor kinase-like 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G16120","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity",".",".","."]
["TRINITY_DN15500_c0_g1","roots S.abrotanoides","roots S. yangii",-1.0876584032014,"0.0139123004125419","0.0235048727673742","TRINITY_DN15500_c0_g1_i1","U89B2_STERE^U89B2_STERE^Q:164-1555,H:7-467^57.42%ID^E:2e-180^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia",".","TRINITY_DN15500_c0_g1_i1.p1","143-1564[+]","U89B2_STERE^U89B2_STERE^Q:8-471,H:7-467^57.42%ID^E:0^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^270-402^E:7.3e-20",".",".",".",".","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47384_c3_g6","roots S.abrotanoides","roots S. yangii",-1.09129335620991,"0.0306219138135698","0.048295715390887","TRINITY_DN47384_c3_g6_i2","MYB4_ORYSJ^MYB4_ORYSJ^Q:342-1,H:1-114^77.19%ID^E:1e-60^RecName: Full=Myb-related protein Myb4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47384_c3_g6_i2.p1","1-342[-]","MYB4_ORYSJ^MYB4_ORYSJ^Q:1-114,H:1-114^77.19%ID^E:7e-61^RecName: Full=Myb-related protein Myb4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^14-61^E:4.6e-16`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^17-75^E:1.4e-12`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^67-111^E:2.9e-16`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^71-113^E:2.7e-07",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:osa:4336407`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44952_c1_g1","roots S.abrotanoides","roots S. yangii",-1.09185450162682,"0.000389568842067724","0.000848662327788421","TRINITY_DN44952_c1_g1_i1","PPOX2_ARATH^PPOX2_ARATH^Q:168-764,H:1-198^63.82%ID^E:5e-90^RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44952_c1_g1_i1.p1","168-767[+]","PPOX2_ARATH^PPOX2_ARATH^Q:1-199,H:1-198^63.82%ID^E:8e-92^RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12766.4^Pyridox_oxase_2^Pyridoxamine 5'-phosphate oxidase^6-98^E:1.1e-28`PF01243.17^Pyridox_oxidase^Pyridoxamine 5'-phosphate oxidase^20-99^E:1.6e-09",".",".","COG5135^pyridoxamine 5'-phosphate","KEGG:ath:AT2G46580","GO:0010181^molecular_function^FMN binding`GO:0004733^molecular_function^pyridoxamine-phosphate oxidase activity`GO:0009443^biological_process^pyridoxal 5'-phosphate salvage`GO:0008615^biological_process^pyridoxine biosynthetic process","GO:0010181^molecular_function^FMN binding`GO:0004733^molecular_function^pyridoxamine-phosphate oxidase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44506_c1_g1","roots S.abrotanoides","roots S. yangii",-1.09356870911062,"0.00073626785937258","0.00154074747294257","TRINITY_DN44506_c1_g1_i2","PPR28_ARATH^PPR28_ARATH^Q:376-1839,H:108-595^80.74%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g09900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR28_ARATH^PPR28_ARATH^Q:541-1794,H:63-475^34.45%ID^E:1e-81^RecName: Full=Pentatricopeptide repeat-containing protein At1g09900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR28_ARATH^PPR28_ARATH^Q:982-1845,H:103-387^32.99%ID^E:1e-46^RecName: Full=Pentatricopeptide repeat-containing protein At1g09900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR28_ARATH^PPR28_ARATH^Q:1114-1848,H:112-353^32.65%ID^E:3e-39^RecName: Full=Pentatricopeptide repeat-containing protein At1g09900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44506_c1_g1_i2.p1","130-1851[+]","PPR28_ARATH^PPR28_ARATH^Q:66-570,H:91-595^79.21%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g09900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR28_ARATH^PPR28_ARATH^Q:329-573,H:112-353^32.65%ID^E:8e-40^RecName: Full=Pentatricopeptide repeat-containing protein At1g09900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^90-204^E:2.5e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^100-157^E:1.5e-09`PF13041.3^PPR_2^PPR repeat family^110-159^E:3.6e-12`PF01535.17^PPR^PPR repeat^115-142^E:0.0017`PF12854.4^PPR_1^PPR repeat^142-174^E:2.1e-13`PF13041.3^PPR_2^PPR repeat family^145-173^E:1.8e-08`PF01535.17^PPR^PPR repeat^148-173^E:1.1e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^170-224^E:1.2e-08`PF12854.4^PPR_1^PPR repeat^175-204^E:3.9e-10`PF13041.3^PPR_2^PPR repeat family^177-226^E:1.7e-15`PF01535.17^PPR^PPR repeat^180-203^E:0.001`PF12854.4^PPR_1^PPR repeat^208-241^E:1.5e-09`PF13041.3^PPR_2^PPR repeat family^214-261^E:2.1e-16`PF01535.17^PPR^PPR repeat^215-245^E:0.00014`PF13812.3^PPR_3^Pentatricopeptide repeat domain^235-292^E:8.8e-12`PF12854.4^PPR_1^PPR repeat^243-275^E:2.2e-15`PF13041.3^PPR_2^PPR repeat family^247-296^E:3.1e-18`PF01535.17^PPR^PPR repeat^250-280^E:2e-07`PF12854.4^PPR_1^PPR repeat^279-310^E:1.7e-09`PF01535.17^PPR^PPR repeat^285-315^E:2.2e-05`PF13041.3^PPR_2^PPR repeat family^288-331^E:1.3e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^298-328^E:0.00014`PF13812.3^PPR_3^Pentatricopeptide repeat domain^305-363^E:1.8e-08`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^307-417^E:6.5e-10`PF12854.4^PPR_1^PPR repeat^313-345^E:9.9e-13`PF13041.3^PPR_2^PPR repeat family^317-366^E:7.9e-15`PF01535.17^PPR^PPR repeat^320-350^E:3.6e-06`PF12854.4^PPR_1^PPR repeat^349-380^E:6.8e-07`PF13041.3^PPR_2^PPR repeat family^352-401^E:3.1e-16`PF01535.17^PPR^PPR repeat^356-385^E:9e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^379-432^E:1.8e-11`PF12854.4^PPR_1^PPR repeat^383-414^E:3.3e-12`PF13041.3^PPR_2^PPR repeat family^387-422^E:1.2e-09`PF01535.17^PPR^PPR repeat^390-420^E:9.1e-07`PF12854.4^PPR_1^PPR repeat^418-451^E:1.3e-10`PF13041.3^PPR_2^PPR repeat family^424-470^E:4.1e-15`PF01535.17^PPR^PPR repeat^425-455^E:4.3e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^425-467^E:5.9e-08`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^439-567^E:9.9e-10`PF12854.4^PPR_1^PPR repeat^453-485^E:1.3e-08`PF01535.17^PPR^PPR repeat^460-490^E:2.2e-06`PF13041.3^PPR_2^PPR repeat family^465-506^E:1.1e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^482-537^E:6.1e-07`PF12854.4^PPR_1^PPR repeat^489-520^E:1.6e-07`PF13041.3^PPR_2^PPR repeat family^492-539^E:2.2e-14`PF01535.17^PPR^PPR repeat^495-525^E:3e-05`PF01535.17^PPR^PPR repeat^530-559^E:0.0091",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G09900","GO:0016020^cellular_component^membrane",".",".","."]
["TRINITY_DN46031_c2_g2","roots S.abrotanoides","roots S. yangii",-1.09871563140935,"0.00207264033136972","0.00405316653826997","TRINITY_DN46031_c2_g2_i1","RGA4_SOLBU^RGA4_SOLBU^Q:886-2,H:2-273^32.54%ID^E:8e-37^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46031_c2_g2_i1.p1","2-901[-]","RGA4_SOLBU^RGA4_SOLBU^Q:6-300,H:2-273^32.23%ID^E:6e-37^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^179-296^E:4.9e-26`PF13401.3^AAA_22^AAA domain^194-292^E:9.3e-07",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45247_c1_g1","roots S.abrotanoides","roots S. yangii",-1.11223589105736,"0.00416733858511477","0.00775540211846888","TRINITY_DN45247_c1_g1_i1","SOT5_ARATH^SOT5_ARATH^Q:1107-181,H:8-316^50%ID^E:1e-108^RecName: Full=Cytosolic sulfotransferase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45247_c1_g1_i1.p1","154-1314[-]","SOT5_ARATH^SOT5_ARATH^Q:70-385,H:8-323^49.53%ID^E:2e-110^RecName: Full=Cytosolic sulfotransferase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00685.24^Sulfotransfer_1^Sulfotransferase domain^121-382^E:3e-65",".",".","ENOG4111H56^Sulfotransferase","KEGG:ath:AT3G45070","GO:0005737^cellular_component^cytoplasm`GO:1990135^molecular_function^flavonoid sulfotransferase activity`GO:0008146^molecular_function^sulfotransferase activity`GO:0009812^biological_process^flavonoid metabolic process","GO:0008146^molecular_function^sulfotransferase activity",".","."]
["TRINITY_DN44697_c1_g1","roots S.abrotanoides","roots S. yangii",-1.11279734528375,"0.00579040305351479","0.0104969604696202","TRINITY_DN44697_c1_g1_i1","PPR53_ARATH^PPR53_ARATH^Q:180-2207,H:51-760^36.15%ID^E:2e-162^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR53_ARATH^PPR53_ARATH^Q:432-1619,H:33-461^24.13%ID^E:1e-34^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44697_c1_g1_i1.p1","147-2210[+]","PPR53_ARATH^PPR53_ARATH^Q:12-687,H:51-760^36.15%ID^E:1e-165^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR53_ARATH^PPR53_ARATH^Q:96-491,H:33-461^24.13%ID^E:4e-35^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^44-72^E:0.00023`PF01535.17^PPR^PPR repeat^145-175^E:0.034`PF13041.3^PPR_2^PPR repeat family^243-281^E:4.3e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^243-292^E:0.00089`PF01535.17^PPR^PPR repeat^247-276^E:7.9e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^268-325^E:3.1e-07`PF12854.4^PPR_1^PPR repeat^274-307^E:1.2e-05`PF13041.3^PPR_2^PPR repeat family^279-325^E:6.3e-12`PF01535.17^PPR^PPR repeat^281-311^E:5.3e-08`PF13041.3^PPR_2^PPR repeat family^380-427^E:1.1e-12`PF01535.17^PPR^PPR repeat^382-412^E:1.5e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^402-460^E:0.0027`PF01535.17^PPR^PPR repeat^417-444^E:0.0092`PF01535.17^PPR^PPR repeat^454-479^E:0.27`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^553-677^E:3.1e-36",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G20230",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN22012_c0_g2","roots S.abrotanoides","roots S. yangii",-1.11373444628033,"0.0249461001928026","0.0400263572692717","TRINITY_DN22012_c0_g2_i1","CHIT3_VITVI^CHIT3_VITVI^Q:621-94,H:113-290^65.73%ID^E:5e-69^RecName: Full=Acidic endochitinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN22012_c0_g2_i1.p1","58-621[-]","CHIA_TOBAC^CHIA_TOBAC^Q:1-187,H:110-291^63.64%ID^E:2e-78^RecName: Full=Acidic endochitinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00704.25^Glyco_hydro_18^Glycosyl hydrolases family 18^4-174^E:3.8e-13",".",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0000272^biological_process^polysaccharide catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45356_c2_g2","roots S.abrotanoides","roots S. yangii",-1.11878896844796,"0.0111936170360363","0.0192432691567028","TRINITY_DN45356_c2_g2_i2","LOV1B_ARATH^LOV1B_ARATH^Q:185-613,H:58-206^29.7%ID^E:9e-08^RecName: Full=Disease susceptibility protein LOV1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45356_c2_g2_i2.p1","59-613[+]","LOV1C_ARATH^LOV1C_ARATH^Q:43-185,H:58-206^29.7%ID^E:7e-08^RecName: Full=Inactive disease susceptibility protein LOV1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^149-184^E:1.7e-06",".",".","COG4886^leucine Rich Repeat",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44569_c4_g1","roots S.abrotanoides","roots S. yangii",-1.12266340805701,{"v":8207756260.18445,"d":"8.21E+09"},"0.000195160341814155","TRINITY_DN44569_c4_g1_i3","DIT21_ARATH^DIT21_ARATH^Q:373-1227,H:92-376^76.84%ID^E:2e-173^RecName: Full=Dicarboxylate transporter 2.1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DIT21_ARATH^DIT21_ARATH^Q:1296-1856,H:377-563^76.47%ID^E:2e-173^RecName: Full=Dicarboxylate transporter 2.1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44569_c4_g1_i3.p1","97-1230[+]","DIT2_SPIOL^DIT2_SPIOL^Q:92-377,H:92-377^76.92%ID^E:2e-151^RecName: Full=Dicarboxylate transporter 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00939.16^Na_sulph_symp^Sodium:sulfate symporter transmembrane region^100-377^E:2.9e-71",".",".",".",".","GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005313^molecular_function^L-glutamate transmembrane transporter activity`GO:0015140^molecular_function^malate transmembrane transporter activity`GO:0089711^biological_process^L-glutamate transmembrane transport`GO:0015813^biological_process^L-glutamate transport`GO:0071423^biological_process^malate transmembrane transport`GO:0006814^biological_process^sodium ion transport","GO:0005215^molecular_function^transporter activity`GO:0006814^biological_process^sodium ion transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN41083_c0_g1","roots S.abrotanoides","roots S. yangii",-1.12517374087196,"0.00545354927263331","0.00993011536178868","TRINITY_DN41083_c0_g1_i1","TC159_ARATH^TC159_ARATH^Q:2007-3893,H:779-1498^45.57%ID^E:0^RecName: Full=Translocase of chloroplast 159, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41083_c0_g1_i1.p1","192-3896[+]","TC159_ARATH^TC159_ARATH^Q:606-1234,H:779-1498^45.57%ID^E:0^RecName: Full=Translocase of chloroplast 159, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04548.13^AIG1^AIG1 family^684-839^E:5e-21`PF01926.20^MMR_HSR1^50S ribosome-binding GTPase^685-758^E:5.5e-09`PF11886.5^TOC159_MAD^Translocase of chloroplast 159/132, membrane anchor domain^1000-1089^E:1.6e-32`PF11886.5^TOC159_MAD^Translocase of chloroplast 159/132, membrane anchor domain^1086-1225^E:7.8e-38",".",".","ENOG410Y1GS^NA","KEGG:ath:AT4G02510","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009707^cellular_component^chloroplast outer membrane`GO:0005829^cellular_component^cytosol`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009536^cellular_component^plastid`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0046872^molecular_function^metal ion binding`GO:0004888^molecular_function^transmembrane signaling receptor activity`GO:0045036^biological_process^protein targeting to chloroplast`GO:0007165^biological_process^signal transduction","GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN118986_c0_g1","roots S.abrotanoides","roots S. yangii",-1.13289760601625,"0.000669173684440712","0.00141037805815478","TRINITY_DN118986_c0_g1_i1","ELF4_ARATH^ELF4_ARATH^Q:552-313,H:17-92^66.25%ID^E:8e-29^RecName: Full=Protein EARLY FLOWERING 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN118986_c0_g1_i1.p1","253-591[-]","ELF4_ARATH^ELF4_ARATH^Q:14-93,H:17-92^66.25%ID^E:4e-30^RecName: Full=Protein EARLY FLOWERING 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07011.8^DUF1313^Protein of unknown function (DUF1313)^22-100^E:3.5e-38",".",".","ENOG410Y56Z^early flowering","KEGG:ath:AT2G40080","GO:0005634^cellular_component^nucleus`GO:0042803^molecular_function^protein homodimerization activity`GO:0009649^biological_process^entrainment of circadian clock`GO:0009908^biological_process^flower development`GO:0009648^biological_process^photoperiodism`GO:0048573^biological_process^photoperiodism, flowering`GO:0042753^biological_process^positive regulation of circadian rhythm`GO:0010017^biological_process^red or far-red light signaling pathway`GO:0009585^biological_process^red, far-red light phototransduction`GO:0009909^biological_process^regulation of flower development`GO:0080167^biological_process^response to karrikin`GO:0010114^biological_process^response to red light`GO:0048511^biological_process^rhythmic process",".",".","."]
["TRINITY_DN46526_c0_g1","roots S.abrotanoides","roots S. yangii",-1.13902717968881,"0.00214780126786679","0.0041890070658569","TRINITY_DN46526_c0_g1_i1","R1C3_SOLDE^R1C3_SOLDE^Q:7-372,H:775-906^32.84%ID^E:3e-13^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46526_c0_g1_i1.p1","1-381[+]","R1C3_SOLDE^R1C3_SOLDE^Q:3-124,H:775-906^32.84%ID^E:3e-13^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN47690_c0_g2","roots S.abrotanoides","roots S. yangii",-1.14113015397019,"0.00935145928260536","0.0163162934816583","TRINITY_DN47690_c0_g2_i2","YSL2_ARATH^YSL2_ARATH^Q:1762-380,H:200-664^64.73%ID^E:0^RecName: Full=Metal-nicotianamine transporter YSL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`YSL2_ARATH^YSL2_ARATH^Q:2357-1821,H:26-204^61.67%ID^E:0^RecName: Full=Metal-nicotianamine transporter YSL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47690_c0_g2_i2.p1","365-1855[-]","YSL1_ARATH^YSL1_ARATH^Q:36-490,H:219-672^64.84%ID^E:0^RecName: Full=Metal-nicotianamine transporter YSL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03169.12^OPT^OPT oligopeptide transporter protein^36-475^E:1.1e-93",".",".","COG1297^oligo-peptide transporter","KEGG:ath:AT4G24120","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0003006^biological_process^developmental process involved in reproduction`GO:0006811^biological_process^ion transport`GO:0055072^biological_process^iron ion homeostasis`GO:0010039^biological_process^response to iron ion`GO:0048316^biological_process^seed development`GO:0055085^biological_process^transmembrane transport","GO:0055085^biological_process^transmembrane transport",".","."]
["TRINITY_DN44067_c3_g4","roots S.abrotanoides","roots S. yangii",-1.14565585756084,"0.00161973049198914","0.00322044329870266","TRINITY_DN44067_c3_g4_i1","NRT25_ARATH^NRT25_ARATH^Q:1637-210,H:17-493^72.75%ID^E:0^RecName: Full=High affinity nitrate transporter 2.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44067_c3_g4_i1.p1","165-1658[-]","NRT25_ARATH^NRT25_ARATH^Q:8-483,H:17-493^72.75%ID^E:0^RecName: Full=High affinity nitrate transporter 2.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^42-398^E:5.5e-20",".",".","COG2223^Transporter","KEGG:ath:AT1G12940`KO:K02575","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0042128^biological_process^nitrate assimilation`GO:0055085^biological_process^transmembrane transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44721_c1_g1","roots S.abrotanoides","roots S. yangii",-1.14984060331402,"0.000144050815847366","0.000331624276640954","TRINITY_DN44721_c1_g1_i1","PP166_ARATH^PP166_ARATH^Q:1810-530,H:28-458^38.11%ID^E:1e-86^RecName: Full=Pentatricopeptide repeat-containing protein At2g20710, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44721_c1_g1_i1.p1","521-2071[-]","PP166_ARATH^PP166_ARATH^Q:88-514,H:28-458^38.11%ID^E:1e-97^RecName: Full=Pentatricopeptide repeat-containing protein At2g20710, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^197-224^E:0.014`PF01535.17^PPR^PPR repeat^232-260^E:0.00014`PF13812.3^PPR_3^Pentatricopeptide repeat domain^252-291^E:0.0034`PF01535.17^PPR^PPR repeat^265-291^E:0.15`PF01535.17^PPR^PPR repeat^410-434^E:0.0077`PF01535.17^PPR^PPR repeat^443-464^E:0.047",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G20710","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN46749_c2_g1","roots S.abrotanoides","roots S. yangii",-1.15659952956387,"0.0302936117866817","0.0478319285110575","TRINITY_DN46749_c2_g1_i3","PSBS_SOLSG^PSBS_SOLSG^Q:211-543,H:1-120^60%ID^E:7e-09^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46749_c2_g1_i3.p1","211-558[+]","PSBS_SOLSG^PSBS_SOLSG^Q:1-111,H:1-120^57.26%ID^E:2e-24^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN43992_c8_g2","roots S.abrotanoides","roots S. yangii",-1.15800477152394,"0.00222209716845787","0.00432455366607796","TRINITY_DN43992_c8_g2_i4","UBQ11_ARATH^UBQ11_ARATH^Q:3-494,H:48-196^85.98%ID^E:9e-89^RecName: Full=Polyubiquitin 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UBQ11_ARATH^UBQ11_ARATH^Q:129-494,H:1-120^91.8%ID^E:8e-70^RecName: Full=Polyubiquitin 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UBQ11_ARATH^UBQ11_ARATH^Q:3-356,H:124-228^85.59%ID^E:9e-61^RecName: Full=Polyubiquitin 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43992_c8_g2_i4.p1","3-494[+]","UBQ11_ARATH^UBQ11_ARATH^Q:1-164,H:48-196^85.98%ID^E:8e-89^RecName: Full=Polyubiquitin 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UBQ11_ARATH^UBQ11_ARATH^Q:43-164,H:1-120^91.8%ID^E:7e-70^RecName: Full=Polyubiquitin 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UBQ11_ARATH^UBQ11_ARATH^Q:1-118,H:124-228^85.59%ID^E:8e-61^RecName: Full=Polyubiquitin 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00240.20^ubiquitin^Ubiquitin family^1-27^E:1.9e-07`PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^43-113^E:2.1e-16`PF00240.20^ubiquitin^Ubiquitin family^45-116^E:5.4e-34`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^52-113^E:0.027`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^56-111^E:8.9e-05`PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^121-164^E:6e-06`PF00240.20^ubiquitin^Ubiquitin family^123-164^E:3.3e-16`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^134-163^E:0.013",".",".","COG5272^ubiquitin","KEGG:ath:AT4G05050`KO:K08770","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0006511^biological_process^ubiquitin-dependent protein catabolic process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47718_c2_g7","roots S.abrotanoides","roots S. yangii",-1.16334393514266,"0.000766065169967605","0.00159759866502947","TRINITY_DN47718_c2_g7_i1","R1C3_SOLDE^R1C3_SOLDE^Q:1-297,H:672-766^42.42%ID^E:2e-18^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47718_c2_g7_i1.p1","1-300[+]","R1C3_SOLDE^R1C3_SOLDE^Q:1-99,H:672-766^42.42%ID^E:2e-18^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-99^E:9e-22",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46706_c2_g1","roots S.abrotanoides","roots S. yangii",-1.17641192397602,"0.000647194592408675","0.00136663120514592","TRINITY_DN46706_c2_g1_i1","R1B14_SOLDE^R1B14_SOLDE^Q:28-540,H:537-712^40.34%ID^E:4e-29^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46706_c2_g1_i1.p1","70-540[+]","R1B14_SOLDE^R1B14_SOLDE^Q:13-157,H:563-712^44.67%ID^E:3e-30^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^3-157^E:1.3e-39`PF13401.3^AAA_22^AAA domain^9-109^E:3.7e-08`PF13173.3^AAA_14^AAA domain^11-123^E:6.5e-09",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46791_c0_g1","roots S.abrotanoides","roots S. yangii",-1.18483629547825,"0.00840342329795786","0.014788691211705","TRINITY_DN46791_c0_g1_i1","WRK14_ARATH^WRK14_ARATH^Q:250-1467,H:1-413^44.27%ID^E:3e-87^RecName: Full=Probable WRKY transcription factor 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46791_c0_g1_i1.p1","250-1539[+]","WRK14_ARATH^WRK14_ARATH^Q:1-408,H:1-415^44.29%ID^E:6e-92^RecName: Full=Probable WRKY transcription factor 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^221-278^E:8.9e-26",".",".","ENOG410YD4A^WRKY transcription factor","KEGG:ath:AT1G30650","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN30706_c0_g1","roots S.abrotanoides","roots S. yangii",-1.20098822459804,"0.000601548122933723","0.00127622293871611","TRINITY_DN30706_c0_g1_i1","CHLP_TOBAC^CHLP_TOBAC^Q:198-1580,H:1-464^89.22%ID^E:0^RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN30706_c0_g1_i1.p1","198-1583[+]","CHLP_TOBAC^CHLP_TOBAC^Q:1-461,H:1-464^89.22%ID^E:0^RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01494.16^FAD_binding_3^FAD binding domain^51-83^E:3.3e-05`PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^51-220^E:4.2e-06`PF01134.19^GIDA^Glucose inhibited division protein A^52-86^E:4.8e-05",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0071949^molecular_function^FAD binding`GO:0045550^molecular_function^geranylgeranyl reductase activity`GO:0016628^molecular_function^oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0033385^biological_process^geranylgeranyl diphosphate metabolic process`GO:0015979^biological_process^photosynthesis`GO:0033521^biological_process^phytyl diphosphate biosynthetic process`GO:0010189^biological_process^vitamin E biosynthetic process","GO:0071949^molecular_function^FAD binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0008033^biological_process^tRNA processing",".","."]
["TRINITY_DN46823_c2_g2","roots S.abrotanoides","roots S. yangii",-1.21665812861794,"0.00114024167385001","0.00231789687952297","TRINITY_DN46823_c2_g2_i5","ASPL2_ARATH^ASPL2_ARATH^Q:632-1378,H:73-321^46.46%ID^E:5e-98^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ASPL2_ARATH^ASPL2_ARATH^Q:1368-1712,H:342-455^51.3%ID^E:5e-98^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46823_c2_g2_i5.p1","986-1387[+]","ASPL2_ARATH^ASPL2_ARATH^Q:5-131,H:193-321^47.73%ID^E:3e-34^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^4-62^E:3.4e-12`PF14541.3^TAXi_C^Xylanase inhibitor C-terminal^81-131^E:2.7e-05",".",".","ENOG410XNV7^aspartic","KEGG:ath:AT1G65240","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0004190^molecular_function^aspartic-type endopeptidase activity",".",".","."]
["TRINITY_DN47485_c7_g7","roots S.abrotanoides","roots S. yangii",-1.22560745592799,{"v":4663396340.59128,"d":"4.66E+09"},"0.000114489023066919","TRINITY_DN47485_c7_g7_i1","R1A3_SOLDE^R1A3_SOLDE^Q:678-25,H:259-483^31.78%ID^E:6e-25^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47485_c7_g7_i1.p1","1-684[-]","R1A3_SOLDE^R1A3_SOLDE^Q:3-220,H:259-483^31.78%ID^E:5e-25^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN44049_c1_g1","roots S.abrotanoides","roots S. yangii",-1.22713637317797,{"v":4850672027.24999,"d":"4.85E+09"},"0.000118669667378856","TRINITY_DN44049_c1_g1_i5","TSS_ARATH^TSS_ARATH^Q:3-1526,H:919-1383^54.67%ID^E:9e-141^RecName: Full=Protein TSS {ECO:0000303|PubMed:21185286};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44049_c1_g1_i5.p1","327-2930[+]","TSS_ARATH^TSS_ARATH^Q:1-138,H:1027-1164^82.61%ID^E:1e-63^RecName: Full=Protein TSS {ECO:0000303|PubMed:21185286};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13424.3^TPR_12^Tetratricopeptide repeat^5-65^E:8.2e-10`PF13374.3^TPR_10^Tetratricopeptide repeat^5-30^E:0.0016",".",".","ENOG410XQUQ^Involved in proper cytoplasmic distribution of mitochondria (By similarity)","KEGG:ath:AT4G28080`KO:K03255","GO:0007049^biological_process^cell cycle`GO:0007275^biological_process^multicellular organism development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43686_c2_g10","roots S.abrotanoides","roots S. yangii",-1.22753365084138,"0.000528576199626373","0.00113050731734235","TRINITY_DN43686_c2_g10_i1","CCU11_ARATH^CCU11_ARATH^Q:853-332,H:16-189^68.39%ID^E:6e-72^RecName: Full=Cyclin-U1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43686_c2_g10_i1.p1","236-904[-]","CCU11_ARATH^CCU11_ARATH^Q:18-191,H:16-189^68.39%ID^E:4e-74^RecName: Full=Cyclin-U1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08613.8^Cyclin^Cyclin^58-164^E:5.6e-34`PF00134.20^Cyclin_N^Cyclin, N-terminal domain^74-164^E:6e-10",".",".","ENOG4111TTK^Cyclin-dependent protein kinase","KEGG:ath:AT3G21870","GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0000079^biological_process^regulation of cyclin-dependent protein serine/threonine kinase activity","GO:0019901^molecular_function^protein kinase binding`GO:0000079^biological_process^regulation of cyclin-dependent protein serine/threonine kinase activity",".","."]
["TRINITY_DN43767_c5_g2","roots S.abrotanoides","roots S. yangii",-1.23088796443222,"0.0198306074509011","0.0324596955351862","TRINITY_DN43767_c5_g2_i1","PXL2_ARATH^PXL2_ARATH^Q:374-2803,H:28-832^62.79%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43767_c5_g2_i1.p1","308-2803[+]","PXL2_ARATH^PXL2_ARATH^Q:3-832,H:1-832^61.37%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^24-69^E:2.7e-07`PF13516.3^LRR_6^Leucine Rich repeat^193-207^E:2`PF13516.3^LRR_6^Leucine Rich repeat^288-304^E:1.7`PF13855.3^LRR_8^Leucine rich repeat^481-541^E:5.9e-07`PF13855.3^LRR_8^Leucine rich repeat^530-589^E:1.2e-10`PF00560.30^LRR_1^Leucine Rich Repeat^555-575^E:0.46`PF00069.22^Pkinase^Protein kinase domain^700-832^E:1.8e-19`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^700-832^E:1.5e-18","sigP:1^19^0.828^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT4G28650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0030154^biological_process^cell differentiation`GO:0010067^biological_process^procambium histogenesis`GO:0001944^biological_process^vasculature development","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44124_c0_g3","roots S.abrotanoides","roots S. yangii",-1.23245608510447,"0.00135209175307863","0.00271887698256711","TRINITY_DN44124_c0_g3_i1","GH31_ARATH^GH31_ARATH^Q:237-497,H:19-105^75.86%ID^E:5e-37^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44124_c0_g3_i1.p1","117-509[+]","GH31_ARATH^GH31_ARATH^Q:25-127,H:8-105^67.96%ID^E:1e-37^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03321.10^GH3^GH3 auxin-responsive promoter^48-127^E:1.6e-25",".",".","ENOG410XQH0^Indole-3-acetic acid-amido synthetase","KEGG:ath:AT2G14960`KO:K14487","GO:0016874^molecular_function^ligase activity`GO:0009733^biological_process^response to auxin",".",".","."]
["TRINITY_DN42481_c0_g1","roots S.abrotanoides","roots S. yangii",-1.24264200038759,{"v":4871876908.11513,"d":"4.87E+09"},"0.000119157136458022","TRINITY_DN42481_c0_g1_i15","CBP1_ORYSJ^CBP1_ORYSJ^Q:2682-1876,H:127-397^58.61%ID^E:1e-161^RecName: Full=Serine carboxypeptidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`CBP1_ORYSJ^CBP1_ORYSJ^Q:1819-1460,H:390-510^62.81%ID^E:1e-161^RecName: Full=Serine carboxypeptidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`CBP1_ORYSJ^CBP1_ORYSJ^Q:2959-2657,H:2-109^55.56%ID^E:1e-161^RecName: Full=Serine carboxypeptidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42481_c0_g1_i15.p2","1867-2706[-]","CBP1_ORYSJ^CBP1_ORYSJ^Q:9-277,H:127-397^58.61%ID^E:5e-107^RecName: Full=Serine carboxypeptidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00450.19^Peptidase_S10^Serine carboxypeptidase^15-276^E:4e-60",".",".","COG2939^carboxy-peptidase","KEGG:osa:4351908`KO:K16296","GO:0005777^cellular_component^peroxisome`GO:0005773^cellular_component^vacuole`GO:0004180^molecular_function^carboxypeptidase activity`GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0019748^biological_process^secondary metabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN43817_c6_g4","roots S.abrotanoides","roots S. yangii",-1.25454175083871,"0.00450231450248129","0.00833217442799243","TRINITY_DN43817_c6_g4_i1","ZHD4_ARATH^ZHD4_ARATH^Q:352-951,H:88-280^45.5%ID^E:6e-39^RecName: Full=Zinc-finger homeodomain protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43817_c6_g4_i1.p1","205-972[+]","ZHD8_ARATH^ZHD8_ARATH^Q:1-248,H:1-240^44.7%ID^E:2e-60^RecName: Full=Zinc-finger homeodomain protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04770.9^ZF-HD_dimer^ZF-HD protein dimerisation region^50-103^E:9.9e-28",".",".","ENOG410YKTX^homeobox protein","KEGG:ath:AT5G15210","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN36502_c0_g1","roots S.abrotanoides","roots S. yangii",-1.25474049700702,"0.00686311185212184","0.0122679018796099","TRINITY_DN36502_c0_g1_i2","WTR24_ARATH^WTR24_ARATH^Q:1057-434,H:125-336^45.07%ID^E:2e-56^RecName: Full=WAT1-related protein At3g30340;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36502_c0_g1_i2.p2","392-961[-]","WTR24_ARATH^WTR24_ARATH^Q:5-176,H:166-336^46.51%ID^E:3e-56^RecName: Full=WAT1-related protein At3g30340;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00892.17^EamA^EamA-like transporter family^25-163^E:3.9e-13",".",".","ENOG410YEU9^Auxin-induced protein","KEGG:ath:AT3G30340","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47684_c1_g1","roots S.abrotanoides","roots S. yangii",-1.27440642677845,"0.00164569166154427","0.00326688495167382","TRINITY_DN47684_c1_g1_i5","PSBB_EUCGG^PSBB_EUCGG^Q:124-603,H:293-452^99.38%ID^E:1e-107^RecName: Full=Photosystem II CP47 reaction center protein {ECO:0000255|HAMAP-Rule:MF_01495};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus",".","TRINITY_DN47684_c1_g1_i5.p1","235-603[+]","PSBB_TOBAC^PSBB_TOBAC^Q:1-123,H:330-452^100%ID^E:5e-80^RecName: Full=Photosystem II CP47 reaction center protein {ECO:0000255|HAMAP-Rule:MF_01495};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00421.16^PSII^Photosystem II protein^1-123^E:3.1e-56",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0045156^molecular_function^electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity`GO:0009772^biological_process^photosynthetic electron transport in photosystem II`GO:0018298^biological_process^protein-chromophore linkage","GO:0016168^molecular_function^chlorophyll binding`GO:0009767^biological_process^photosynthetic electron transport chain`GO:0019684^biological_process^photosynthesis, light reaction`GO:0009521^cellular_component^photosystem`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46746_c5_g2","roots S.abrotanoides","roots S. yangii",-1.28995378377826,"0.00917824563389164","0.0160351004349757","TRINITY_DN46746_c5_g2_i2","RTOR1_ARATH^RTOR1_ARATH^Q:1353-469,H:1051-1344^72.54%ID^E:2e-147^RecName: Full=Regulatory-associated protein of TOR 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46746_c5_g2_i2.p1","466-1242[-]","RTOR1_ARATH^RTOR1_ARATH^Q:1-258,H:1088-1344^71.71%ID^E:3e-125^RecName: Full=Regulatory-associated protein of TOR 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00400.29^WD40^WD domain, G-beta repeat^170-203^E:0.063`PF00400.29^WD40^WD domain, G-beta repeat^224-250^E:0.24",".",".","ENOG410XQKJ^regulatory associated protein of MTOR","KEGG:ath:AT3G08850`KO:K07204","GO:0080008^cellular_component^Cul4-RING E3 ubiquitin ligase complex`GO:0031931^cellular_component^TORC1 complex`GO:0016049^biological_process^cell growth`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0040008^biological_process^regulation of growth`GO:0031929^biological_process^TOR signaling","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45584_c3_g1","roots S.abrotanoides","roots S. yangii",-1.30086892810259,"0.0196124821735619","0.0321478566473949","TRINITY_DN45584_c3_g1_i2","PP320_ARATH^PP320_ARATH^Q:1528-836,H:498-726^39.32%ID^E:2e-82^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2613-1567,H:141-483^29.55%ID^E:2e-82^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1540-911,H:291-498^30.33%ID^E:2e-37^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2268-1567,H:52-281^27.12%ID^E:2e-37^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2592-1546,H:249-592^28.05%ID^E:4e-32^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1540-1295,H:595-677^26.51%ID^E:4e-32^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2511-1828,H:380-599^25.88%ID^E:6e-16^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1540-911,H:190-396^25.59%ID^E:3e-11^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1531-896,H:92-300^24.42%ID^E:3e-06^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45584_c3_g1_i2.p1","1528-2781[-]","PPR21_ARATH^PPR21_ARATH^Q:30-405,H:52-455^31.48%ID^E:3e-50^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR21_ARATH^PPR21_ARATH^Q:104-411,H:23-358^27.54%ID^E:1e-32^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR21_ARATH^PPR21_ARATH^Q:61-341,H:216-492^30.93%ID^E:2e-25^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR21_ARATH^PPR21_ARATH^Q:238-415,H:50-230^30.39%ID^E:4e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^180-206^E:0.11`PF01535.17^PPR^PPR repeat^255-283^E:0.023`PF13041.3^PPR_2^PPR repeat family^283-330^E:9.1e-09`PF01535.17^PPR^PPR repeat^285-315^E:3e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^343-395^E:0.0058`PF01535.17^PPR^PPR repeat^358-382^E:0.004`PF01535.17^PPR^PPR repeat^388-412^E:0.037",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G08070","GO:0009507^cellular_component^chloroplast`GO:0031425^biological_process^chloroplast RNA processing`GO:0006397^biological_process^mRNA processing",".",".","."]
["TRINITY_DN46023_c3_g6","roots S.abrotanoides","roots S. yangii",-1.30571155556292,"0.00189090127977889","0.00371884793822073","TRINITY_DN46023_c3_g6_i1","WAKLH_ARATH^WAKLH_ARATH^Q:588-175,H:628-764^40.28%ID^E:1e-27^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46023_c3_g6_i1.p1","118-588[-]","WAKLH_ARATH^WAKLH_ARATH^Q:1-138,H:628-764^42.55%ID^E:2e-27^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^2-91^E:1.8e-08`PF00069.22^Pkinase^Protein kinase domain^2-87^E:7.8e-08",".",".",".","KEGG:ath:AT1G69730","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN41932_c0_g1","roots S.abrotanoides","roots S. yangii",-1.30710771521501,"0.000514449065229215","0.00110223305970167","TRINITY_DN41932_c0_g1_i4","JAR1_ARATH^JAR1_ARATH^Q:766-2154,H:119-575^51.83%ID^E:2e-166^RecName: Full=Jasmonic acid-amido synthetase JAR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`JAR1_ARATH^JAR1_ARATH^Q:365-676,H:28-126^43.27%ID^E:1e-12^RecName: Full=Jasmonic acid-amido synthetase JAR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41932_c0_g1_i4.p1","940-2163[+]","GH35_ORYSJ^GH35_ORYSJ^Q:4-406,H:173-580^52.44%ID^E:2e-158^RecName: Full=Jasmonic acid-amido synthetase JAR1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF03321.10^GH3^GH3 auxin-responsive promoter^5-385^E:7e-136",".",".","ENOG410XQH0^Indole-3-acetic acid-amido synthetase","KEGG:osa:4339756`KO:K14506","GO:0080123^molecular_function^jasmonate-amino synthetase activity`GO:0009864^biological_process^induced systemic resistance, jasmonic acid mediated signaling pathway`GO:0009694^biological_process^jasmonic acid metabolic process`GO:0007275^biological_process^multicellular organism development`GO:0040008^biological_process^regulation of growth`GO:2000030^biological_process^regulation of response to red or far red light`GO:0009733^biological_process^response to auxin`GO:0009416^biological_process^response to light stimulus`GO:0010046^biological_process^response to mycotoxin`GO:0010224^biological_process^response to UV-B`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN40603_c0_g2","roots S.abrotanoides","roots S. yangii",-1.31194153840143,"0.00720786511508245","0.0128397448367189","TRINITY_DN40603_c0_g2_i1","HEXO2_ARATH^HEXO2_ARATH^Q:1880-231,H:26-574^64.56%ID^E:0^RecName: Full=Beta-hexosaminidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40603_c0_g2_i1.p1","228-1958[-]","HEXO2_ARATH^HEXO2_ARATH^Q:9-576,H:11-574^63.4%ID^E:0^RecName: Full=Beta-hexosaminidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02838.12^Glyco_hydro_20b^Glycosyl hydrolase family 20, domain 2^32-157^E:4.2e-06`PF14845.3^Glycohydro_20b2^beta-acetyl hexosaminidase like^34-150^E:2.7e-18`PF00728.19^Glyco_hydro_20^Glycosyl hydrolase family 20, catalytic domain^170-526^E:3.4e-100","sigP:1^27^0.741^YES",".","COG3525^ec 3.2.1.52","KEGG:ath:AT1G05590`KO:K12373","GO:0005886^cellular_component^plasma membrane`GO:0004563^molecular_function^beta-N-acetylhexosaminidase activity`GO:0015929^molecular_function^hexosaminidase activity`GO:0035251^molecular_function^UDP-glucosyltransferase activity`GO:0005975^biological_process^carbohydrate metabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44758_c5_g1","roots S.abrotanoides","roots S. yangii",-1.31438858684473,"0.00032355319801131","0.000712676641305864","TRINITY_DN44758_c5_g1_i1","RNG1L_ARATH^RNG1L_ARATH^Q:302-117,H:196-262^41.79%ID^E:6e-11^RecName: Full=E3 ubiquitin-protein ligase RING1-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44758_c5_g1_i1.p1","93-446[-]","RNG1L_ARATH^RNG1L_ARATH^Q:29-110,H:176-262^35.63%ID^E:1e-13^RecName: Full=E3 ubiquitin-protein ligase RING1-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^63-105^E:8.4e-12`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^63-104^E:3e-10`PF17123.2^zf-RING_11^RING-like zinc finger^63-91^E:2.8e-08`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^64-102^E:2.8e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^64-104^E:1.8e-06",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT3G19950`KO:K11982","GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47633_c1_g1","roots S.abrotanoides","roots S. yangii",-1.31448648682188,"0.00121847657362727","0.00246813498214583","TRINITY_DN47633_c1_g1_i2","MPCP2_ARATH^MPCP2_ARATH^Q:519-878,H:233-352^82.5%ID^E:1e-95^RecName: Full=Mitochondrial phosphate carrier protein 2, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MPCP2_ARATH^MPCP2_ARATH^Q:5-421,H:94-231^54.68%ID^E:1e-95^RecName: Full=Mitochondrial phosphate carrier protein 2, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47633_c1_g1_i2.p2","471-899[+]","MPCP2_ARATH^MPCP2_ARATH^Q:17-136,H:233-352^82.5%ID^E:2e-65^RecName: Full=Mitochondrial phosphate carrier protein 2, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XPST^Phosphate carrier protein","KEGG:ath:AT3G48850`KO:K15102","GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009651^biological_process^response to salt stress`GO:0006412^biological_process^translation`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN44209_c2_g5","roots S.abrotanoides","roots S. yangii",-1.31540003076131,"0.00024685766688636","0.000551619487401775","TRINITY_DN44209_c2_g5_i1","PYL4_ARATH^PYL4_ARATH^Q:333-803,H:40-196^79.11%ID^E:4e-71^RecName: Full=Abscisic acid receptor PYL4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44209_c2_g5_i1.p1","3-830[+]","PYL4_ARATH^PYL4_ARATH^Q:111-267,H:40-196^79.11%ID^E:6e-78^RecName: Full=Abscisic acid receptor PYL4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10604.6^Polyketide_cyc2^Polyketide cyclase / dehydrase and lipid transport^125-263^E:1.8e-20`PF03364.17^Polyketide_cyc^Polyketide cyclase / dehydrase and lipid transport^131-239^E:3.1e-05`PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^148-231^E:3.9e-06",".",".","ENOG4111MYF^abscisic acid receptor","KEGG:ath:AT2G38310`KO:K14496","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0010427^molecular_function^abscisic acid binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0004864^molecular_function^protein phosphatase inhibitor activity`GO:0004872^molecular_function^receptor activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0043086^biological_process^negative regulation of catalytic activity`GO:0080163^biological_process^regulation of protein serine/threonine phosphatase activity","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN63000_c0_g1","roots S.abrotanoides","roots S. yangii",-1.31638330026432,"0.014902780478357","0.0250147463656883","TRINITY_DN63000_c0_g1_i1","GH31_ARATH^GH31_ARATH^Q:781-5,H:1-264^78.41%ID^E:9e-144^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN63000_c0_g1_i1.p1","2-781[-]","GH31_ARATH^GH31_ARATH^Q:1-259,H:1-264^78.41%ID^E:3e-144^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03321.10^GH3^GH3 auxin-responsive promoter^21-259^E:3.1e-76",".",".","ENOG410XQH0^Indole-3-acetic acid-amido synthetase","KEGG:ath:AT2G14960`KO:K14487","GO:0016874^molecular_function^ligase activity`GO:0009733^biological_process^response to auxin",".",".","."]
["TRINITY_DN19959_c0_g1","roots S.abrotanoides","roots S. yangii",-1.32292994744978,"0.0212564429122798","0.0345929449246904","TRINITY_DN19959_c0_g1_i1","USPAL_ARATH^USPAL_ARATH^Q:181-438,H:79-162^27.91%ID^E:2e-09^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN19959_c0_g1_i1.p1","1-441[+]","USPAL_ARATH^USPAL_ARATH^Q:61-146,H:79-162^27.91%ID^E:1e-09^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00582.23^Usp^Universal stress protein family^25-146^E:1.2e-16",".",".","ENOG41119AN^Universal stress protein","KEGG:ath:AT3G01520","GO:0005886^cellular_component^plasma membrane`GO:0016208^molecular_function^AMP binding`GO:0006950^biological_process^response to stress","GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN37262_c0_g2","roots S.abrotanoides","roots S. yangii",-1.33367870610448,"0.00940434802575601","0.0163995705863773","TRINITY_DN37262_c0_g2_i1","BHLHW_PEA^BHLHW_PEA^Q:459-1,H:275-425^34.78%ID^E:7e-08^RecName: Full=Basic helix-loop-helix protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN37262_c0_g2_i1.p1","1-570[-]","BHLHW_PEA^BHLHW_PEA^Q:46-190,H:283-425^38.46%ID^E:4e-18^RecName: Full=Basic helix-loop-helix protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".",".",".",".",".","GO:0005634^cellular_component^nucleus`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN9651_c0_g1","roots S.abrotanoides","roots S. yangii",-1.33861094518657,"0.0262557155632016","0.0419589881349471","TRINITY_DN9651_c0_g1_i1","CR26L_ARATH^CR26L_ARATH^Q:972-535,H:39-179^29.8%ID^E:2e-11^RecName: Full=Protein ECERIFERUM 26-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN9651_c0_g1_i1.p1","13-1134[-]","CR26L_ARATH^CR26L_ARATH^Q:55-200,H:39-179^29.8%ID^E:7e-13^RecName: Full=Protein ECERIFERUM 26-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02458.12^Transferase^Transferase family^27-211^E:9.7e-23",".",".","ENOG410YCVD^Transferase family","KEGG:ath:AT3G23840","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0071555^biological_process^cell wall organization`GO:0009555^biological_process^pollen development`GO:0042761^biological_process^very long-chain fatty acid biosynthetic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN45590_c3_g5","roots S.abrotanoides","roots S. yangii",-1.35295639925759,"0.0185938886437107","0.030584084452459","TRINITY_DN45590_c3_g5_i1","RNZN_ARATH^RNZN_ARATH^Q:925-500,H:139-280^63.38%ID^E:1e-58^RecName: Full=Nuclear ribonuclease Z;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45590_c3_g5_i1.p1","524-925[-]","RNZN_ARATH^RNZN_ARATH^Q:1-133,H:139-271^63.16%ID^E:1e-57^RecName: Full=Nuclear ribonuclease Z;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZMQJ^nuclear ribonuclease","KEGG:ath:AT1G74700`KO:K00784","GO:0005634^cellular_component^nucleus`GO:0042781^molecular_function^3'-tRNA processing endoribonuclease activity`GO:0046872^molecular_function^metal ion binding`GO:0042780^biological_process^tRNA 3'-end processing`GO:0034414^biological_process^tRNA 3'-trailer cleavage, endonucleolytic`GO:0008033^biological_process^tRNA processing",".",".","."]
["TRINITY_DN46385_c1_g3","roots S.abrotanoides","roots S. yangii",-1.35650099866467,{"v":5243077716.29282,"d":"5.24E+09"},"0.000127732875116346","TRINITY_DN46385_c1_g3_i2","EF110_ARATH^EF110_ARATH^Q:868-1251,H:72-192^60.31%ID^E:1e-27^RecName: Full=Ethylene-responsive transcription factor ERF110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46385_c1_g3_i2.p1","292-1524[+]","EF110_ARATH^EF110_ARATH^Q:80-320,H:1-192^44.49%ID^E:1e-33^RecName: Full=Ethylene-responsive transcription factor ERF110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^197-246^E:9e-14",".",".","ENOG410YY7D^Transcription factor","KEGG:ath:AT5G50080","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0048510^biological_process^regulation of timing of transition from vegetative to reproductive phase`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46181_c2_g1","roots S.abrotanoides","roots S. yangii",-1.36927813013394,"0.00437086148819597","0.00810662069974666","TRINITY_DN46181_c2_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:1502-126,H:782-1238^27.01%ID^E:3e-14^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46181_c2_g1_i1.p1","120-1502[-]","R1A6_SOLDE^R1A6_SOLDE^Q:1-459,H:782-1238^28.4%ID^E:5e-24^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN32273_c0_g2","roots S.abrotanoides","roots S. yangii",-1.38842570287187,"0.00204743302966364","0.00400779923510101","TRINITY_DN32273_c0_g2_i1","GDL28_ARATH^GDL28_ARATH^Q:28-750,H:135-374^68.05%ID^E:1e-116^RecName: Full=GDSL esterase/lipase At1g71250;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32273_c0_g2_i1.p1","94-759[+]","GDL28_ARATH^GDL28_ARATH^Q:1-219,H:157-374^68.04%ID^E:3e-105^RecName: Full=GDSL esterase/lipase At1g71250;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^15-198^E:6.4e-09",".",".","ENOG4110AT7^GDSL esterase lipase","KEGG:ath:AT1G71250","GO:0005576^cellular_component^extracellular region`GO:0016298^molecular_function^lipase activity`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN38626_c0_g1","roots S.abrotanoides","roots S. yangii",-1.39160693724617,"0.00215801970125273","0.00420834927922267","TRINITY_DN38626_c0_g1_i2",".",".","TRINITY_DN38626_c0_g1_i2.p1","53-412[+]","LEAD8_DAUCA^LEAD8_DAUCA^Q:11-119,H:469-555^39.45%ID^E:8e-10^RecName: Full=Embryonic protein DC-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".",".",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005737^cellular_component^cytoplasm`GO:0005576^cellular_component^extracellular region",".",".","."]
["TRINITY_DN89660_c0_g1","roots S.abrotanoides","roots S. yangii",-1.40158893271741,"0.000793191969161905","0.00165108968266057","TRINITY_DN89660_c0_g1_i1","GUN16_ARATH^GUN16_ARATH^Q:220-663,H:326-484^64.15%ID^E:1e-63^RecName: Full=Endoglucanase 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN89660_c0_g1_i1.p1","97-684[+]","GUN16_ARATH^GUN16_ARATH^Q:42-189,H:326-484^64.15%ID^E:1e-64^RecName: Full=Endoglucanase 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00759.16^Glyco_hydro_9^Glycosyl hydrolase family 9^42-185^E:1.5e-31",".",".","ENOG410ZZU6^glycosyl hydrolase","KEGG:ath:AT3G43860`KO:K01179","GO:0005576^cellular_component^extracellular region`GO:0008810^molecular_function^cellulase activity`GO:0071555^biological_process^cell wall organization`GO:0030245^biological_process^cellulose catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44413_c0_g2","roots S.abrotanoides","roots S. yangii",-1.40762670468017,"0.0134536886828473","0.0227879192220802","TRINITY_DN44413_c0_g2_i1","PMTA_ARATH^PMTA_ARATH^Q:1593-220,H:187-653^59.83%ID^E:0^RecName: Full=Probable methyltransferase PMT10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44413_c0_g2_i1.p1","211-1641[-]","PMTA_ARATH^PMTA_ARATH^Q:17-474,H:187-653^59.83%ID^E:0^RecName: Full=Probable methyltransferase PMT10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03141.13^Methyltransf_29^Putative S-adenosyl-L-methionine-dependent methyltransferase^16-474^E:2.6e-172`PF08241.9^Methyltransf_11^Methyltransferase domain^96-186^E:0.00032",".",".","ENOG410ZKVC^Methyltransferase","KEGG:ath:AT1G77260","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0008168^molecular_function^methyltransferase activity","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44388_c4_g6","roots S.abrotanoides","roots S. yangii",-1.41282648804281,"0.00367851643825523","0.00691804723707946","TRINITY_DN44388_c4_g6_i1","HSP82_ORYSJ^HSP82_ORYSJ^Q:2167-56,H:1-699^68.27%ID^E:0^RecName: Full=Heat shock protein 81-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44388_c4_g6_i1.p1","53-2173[-]","HSP83_ORYSJ^HSP83_ORYSJ^Q:3-706,H:1-699^68.27%ID^E:0^RecName: Full=Heat shock protein 81-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF13589.3^HATPase_c_3^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^28-149^E:7.4e-10`PF02518.23^HATPase_c^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^30-184^E:2.5e-16`PF00183.15^HSP90^Hsp90 protein^187-692^E:9.3e-225",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:osa:4347405`KEGG:osa:9267802`KO:K04079","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN46654_c0_g4","roots S.abrotanoides","roots S. yangii",-1.43273102245505,"0.00685866313681859","0.0122624716346204","TRINITY_DN46654_c0_g4_i3","Y4230_ARATH^Y4230_ARATH^Q:2476-161,H:28-819^41.05%ID^E:1e-170^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46654_c0_g4_i3.p1","56-2563[-]","Y1661_ARATH^Y1661_ARATH^Q:4-835,H:7-842^40.21%ID^E:0^RecName: Full=Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^81-183^E:3.9e-26`PF08276.8^PAN_2^PAN-like domain^354-411^E:7.1e-14`PF14295.3^PAN_4^PAN domain^378-400^E:0.14`PF00069.22^Pkinase^Protein kinase domain^520-719^E:5.5e-44`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^522-786^E:4.6e-46","sigP:1^21^0.808^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G61610","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN33582_c0_g1","roots S.abrotanoides","roots S. yangii",-1.44278275255875,"0.00585900132817974","0.0106116779743742","TRINITY_DN33582_c0_g1_i1","PHYLL_TOBAC^PHYLL_TOBAC^Q:225-566,H:38-149^36.13%ID^E:6e-09^RecName: Full=Phylloplanin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN33582_c0_g1_i1.p1","150-569[+]","PHYLL_TOBAC^PHYLL_TOBAC^Q:26-139,H:38-149^36.13%ID^E:1e-09^RecName: Full=Phylloplanin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".",".",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN60405_c0_g1","roots S.abrotanoides","roots S. yangii",-1.45593659761297,"0.0283121069286908","0.0449547411317014","TRINITY_DN60405_c0_g1_i1","ENO_RICCO^ENO_RICCO^Q:1-438,H:287-429^71.23%ID^E:1e-65^RecName: Full=Enolase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN60405_c0_g1_i1.p1","1-462[+]","ENO_RICCO^ENO_RICCO^Q:1-146,H:287-429^71.23%ID^E:7e-66^RecName: Full=Enolase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus","PF00113.19^Enolase_C^Enolase, C-terminal TIM barrel domain^1-146^E:5.8e-71`PF13378.3^MR_MLE_C^Enolase C-terminal domain-like^7-114^E:1.2e-06`PF07476.8^MAAL_C^Methylaspartate ammonia-lyase C-terminus^12-118^E:3.2e-05",".",".",".",".","GO:0000015^cellular_component^phosphopyruvate hydratase complex`GO:0000287^molecular_function^magnesium ion binding`GO:0004634^molecular_function^phosphopyruvate hydratase activity`GO:0006096^biological_process^glycolytic process","GO:0000287^molecular_function^magnesium ion binding`GO:0004634^molecular_function^phosphopyruvate hydratase activity`GO:0006096^biological_process^glycolytic process`GO:0000015^cellular_component^phosphopyruvate hydratase complex",".","."]
["TRINITY_DN35282_c0_g1","roots S.abrotanoides","roots S. yangii",-1.46746303471843,"0.000527443654863967","0.00112825778292406","TRINITY_DN35282_c0_g1_i5","CAR7_ARATH^CAR7_ARATH^Q:703-257,H:17-165^61.74%ID^E:2e-59^RecName: Full=Protein C2-DOMAIN ABA-RELATED 7 {ECO:0000303|PubMed:25465408};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35282_c0_g1_i5.p1","248-925[-]","CAR7_ARATH^CAR7_ARATH^Q:61-223,H:3-165^61.96%ID^E:1e-71^RecName: Full=Protein C2-DOMAIN ABA-RELATED 7 {ECO:0000303|PubMed:25465408};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^65-151^E:1.7e-20",".",".","COG5038^Domain-Containing protein","KEGG:ath:AT1G70810","GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005096^molecular_function^GTPase activator activity`GO:0046872^molecular_function^metal ion binding`GO:0005543^molecular_function^phospholipid binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009789^biological_process^positive regulation of abscisic acid-activated signaling pathway`GO:0043547^biological_process^positive regulation of GTPase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45426_c6_g3","roots S.abrotanoides","roots S. yangii",-1.4844749005064,"0.00288017325748346","0.00550933942543612","TRINITY_DN45426_c6_g3_i1","C71A6_NEPRA^C71A6_NEPRA^Q:705-301,H:375-509^76.3%ID^E:2e-69^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta",".","TRINITY_DN45426_c6_g3_i1.p1","298-705[-]","C71A6_NEPRA^C71A6_NEPRA^Q:1-135,H:375-509^76.3%ID^E:4e-71^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta","PF00067.19^p450^Cytochrome P450^1-120^E:1.7e-32",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45385_c4_g2","roots S.abrotanoides","roots S. yangii",-1.50067445022724,{"v":7684526777.81074,"d":"7.68E+09"},"0.000183249434751907","TRINITY_DN45385_c4_g2_i2","LAC2_ORYSJ^LAC2_ORYSJ^Q:32-652,H:360-562^53.14%ID^E:4e-73^RecName: Full=Laccase-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45385_c4_g2_i2.p1","125-655[+]","LAC2_ORYSJ^LAC2_ORYSJ^Q:2-176,H:390-562^54.86%ID^E:2e-64^RecName: Full=Laccase-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF07731.11^Cu-oxidase_2^Multicopper oxidase^26-159^E:6.6e-39",".",".","COG2132^Multicopper oxidase",".","GO:0048046^cellular_component^apoplast`GO:0005507^molecular_function^copper ion binding`GO:0052716^molecular_function^hydroquinone:oxygen oxidoreductase activity`GO:0016722^molecular_function^oxidoreductase activity, oxidizing metal ions`GO:0010413^biological_process^glucuronoxylan metabolic process`GO:0009809^biological_process^lignin biosynthetic process`GO:0046274^biological_process^lignin catabolic process`GO:0045492^biological_process^xylan biosynthetic process","GO:0005507^molecular_function^copper ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44355_c0_g1","roots S.abrotanoides","roots S. yangii",-1.50084384803292,"0.00773469646043055","0.0137102806446038","TRINITY_DN44355_c0_g1_i1","SLAH3_ARATH^SLAH3_ARATH^Q:3-1187,H:223-624^69.4%ID^E:1e-170^RecName: Full=S-type anion channel SLAH3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44355_c0_g1_i1.p1","3-1226[+]","SLAH3_ARATH^SLAH3_ARATH^Q:1-396,H:223-625^69.73%ID^E:0^RecName: Full=S-type anion channel SLAH3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03595.14^SLAC1^Voltage-dependent anion channel^36-339^E:3e-53",".",".","ENOG4111I0D^C4-dicarboxylate transporter malic acid transport protein","KEGG:ath:AT5G24030","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0008308^molecular_function^voltage-gated anion channel activity`GO:0006873^biological_process^cellular ion homeostasis","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45977_c0_g1","roots S.abrotanoides","roots S. yangii",-1.50434880814529,"0.0183477833840521","0.0302184152981905","TRINITY_DN45977_c0_g1_i2","NLTP2_SOLPN^NLTP2_SOLPN^Q:838-497,H:1-114^57.02%ID^E:2e-37^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45977_c0_g1_i2.p2","494-850[-]","NLTP2_SOLPN^NLTP2_SOLPN^Q:5-118,H:1-114^57.02%ID^E:3e-40^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF14368.3^LTP_2^Probable lipid transfer^11-106^E:5.4e-06`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^31-114^E:2e-08","sigP:1^27^0.864^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN46213_c3_g1","roots S.abrotanoides","roots S. yangii",-1.51431014466542,"0.00222017828603163","0.00432172227184129","TRINITY_DN46213_c3_g1_i1","R1C3_SOLDE^R1C3_SOLDE^Q:157-546,H:1055-1207^34.42%ID^E:9e-10^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46213_c3_g1_i1.p1","82-552[+]","R1B23_SOLDE^R1B23_SOLDE^Q:32-155,H:1051-1177^40.62%ID^E:2e-10^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46932_c4_g5","roots S.abrotanoides","roots S. yangii",-1.52653734752685,{"v":57268117.56832,"d":"5.73E+07"},"0.000138812513746055","TRINITY_DN46932_c4_g5_i1","ZOG_PHALU^ZOG_PHALU^Q:1625-267,H:14-459^54.37%ID^E:3e-152^RecName: Full=Zeatin O-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus",".","TRINITY_DN46932_c4_g5_i1.p1","264-1799[-]","ZOG_PHALU^ZOG_PHALU^Q:59-511,H:14-459^54.37%ID^E:1e-168^RecName: Full=Zeatin O-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^295-436^E:3e-20",".",".",".","KEGG:ag:AAD04166`KO:K13492","GO:0050403^molecular_function^trans-zeatin O-beta-D-glucosyltransferase activity","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44538_c3_g1","roots S.abrotanoides","roots S. yangii",-1.5546500328322,"0.00475100707676236","0.00874722514047293","TRINITY_DN44538_c3_g1_i1","UBIQP_HORVU^UBIQP_HORVU^Q:485-249,H:16-94^97.47%ID^E:9e-48^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:485-249,H:92-170^97.47%ID^E:9e-48^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN44538_c3_g1_i1.p1","36-485[-]","UBIQP_HORVU^UBIQP_HORVU^Q:1-79,H:16-94^97.47%ID^E:2e-48^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:1-79,H:92-170^97.47%ID^E:2e-48^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum","PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^4-74^E:4e-16`PF00240.20^ubiquitin^Ubiquitin family^6-77^E:2.4e-34`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^13-76^E:0.0085`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^15-72^E:3.9e-05`PF01428.13^zf-AN1^AN1-like Zinc finger^86-125^E:3.6e-12",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN37145_c0_g1","roots S.abrotanoides","roots S. yangii",-1.55772912163617,"0.000126195025789516","0.000292834084842194","TRINITY_DN37145_c0_g1_i3","Y1491_ARATH^Y1491_ARATH^Q:620-1432,H:51-317^32.97%ID^E:2e-37^RecName: Full=Uncharacterized protein At1g04910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1491_ARATH^Y1491_ARATH^Q:1483-1983,H:308-475^29.31%ID^E:6e-15^RecName: Full=Uncharacterized protein At1g04910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37145_c0_g1_i3.p1","290-1444[+]","Y1491_ARATH^Y1491_ARATH^Q:111-381,H:51-317^32.97%ID^E:7e-39^RecName: Full=Uncharacterized protein At1g04910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10250.6^O-FucT^GDP-fucose protein O-fucosyltransferase^157-362^E:7.1e-37",".",".","ENOG410Z25U^DUF246 domain-containing protein","KEGG:ath:AT1G04910","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".",".","."]
["TRINITY_DN47453_c0_g5","roots S.abrotanoides","roots S. yangii",-1.57118102603418,"0.00264763137735835","0.00509451610183663","TRINITY_DN47453_c0_g5_i1","FRO5_ARATH^FRO5_ARATH^Q:39-608,H:512-707^58.88%ID^E:6e-65^RecName: Full=Ferric reduction oxidase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47453_c0_g5_i1.p1","144-611[+]","FRO5_ARATH^FRO5_ARATH^Q:1-155,H:547-707^59.26%ID^E:9e-61^RecName: Full=Ferric reduction oxidase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08030.9^NAD_binding_6^Ferric reductase NAD binding domain^61-139^E:1.5e-10",".",".",".","KEGG:ath:AT5G23990","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0000293^molecular_function^ferric-chelate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0006811^biological_process^ion transport`GO:0055114^biological_process^oxidation-reduction process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN119665_c0_g1","roots S.abrotanoides","roots S. yangii",-1.57448414378706,"0.000668726919267446","0.00140954276186268","TRINITY_DN119665_c0_g1_i1","Y1670_ARATH^Y1670_ARATH^Q:6-644,H:623-843^52.44%ID^E:1e-69^RecName: Full=Probable receptor-like protein kinase At1g67000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN119665_c0_g1_i1.p1","78-758[+]","Y1670_ARATH^Y1670_ARATH^Q:7-200,H:649-854^52.91%ID^E:1e-66^RecName: Full=Probable receptor-like protein kinase At1g67000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^6-181^E:3.8e-26`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^8-181^E:2.9e-22",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G67000","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44242_c6_g2","roots S.abrotanoides","roots S. yangii",-1.58220564209165,"0.000512126483227294","0.00109742511449144","TRINITY_DN44242_c6_g2_i2","TBL42_ARATH^TBL42_ARATH^Q:1048-548,H:38-208^57.8%ID^E:4e-70^RecName: Full=Protein trichome birefringence-like 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TBL42_ARATH^TBL42_ARATH^Q:465-313,H:209-259^58.82%ID^E:4e-70^RecName: Full=Protein trichome birefringence-like 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44242_c6_g2_i2.p1","545-1198[-]","TBL38_ARATH^TBL38_ARATH^Q:45-214,H:55-229^54.29%ID^E:2e-65^RecName: Full=Protein trichome birefringence-like 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14416.3^PMR5N^PMR5 N terminal Domain^50-102^E:1.9e-23`PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^103-213^E:5.2e-32","sigP:1^40^0.519^YES",".","ENOG410YAJT^function domain containing protein, expressed","KEGG:ath:AT1G29050","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:0071554^biological_process^cell wall organization or biogenesis",".",".","."]
["TRINITY_DN43372_c5_g3","roots S.abrotanoides","roots S. yangii",-1.61310749204469,"0.00126441647603923","0.00255581717116488","TRINITY_DN43372_c5_g3_i2","FEZ_ARATH^FEZ_ARATH^Q:423-4,H:3-142^82.86%ID^E:8e-83^RecName: Full=Protein FEZ;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43372_c5_g3_i2.p1","1-426[-]","FEZ_ARATH^FEZ_ARATH^Q:2-141,H:3-142^82.86%ID^E:2e-83^RecName: Full=Protein FEZ;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^17-142^E:1.1e-26",".",".","ENOG410YHVU^NAC domain-containing protein","KEGG:ath:AT1G26870","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN72300_c0_g1","roots S.abrotanoides","roots S. yangii",-1.61672098098686,"0.00226578482819837","0.00440313631135697","TRINITY_DN72300_c0_g1_i1","GAI1_VITVI^GAI1_VITVI^Q:567-1700,H:204-576^28.53%ID^E:3e-47^RecName: Full=DELLA protein GAI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN72300_c0_g1_i1.p1","120-1721[+]","GAI1_VITVI^GAI1_VITVI^Q:150-527,H:204-576^28.53%ID^E:2e-47^RecName: Full=DELLA protein GAI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF03514.11^GRAS^GRAS domain family^160-526^E:5.1e-76",".",".","ENOG410YBFY^DELLA protein","KEGG:vvi:100232937`KO:K14494","GO:0005634^cellular_component^nucleus`GO:0000989^molecular_function^transcription factor activity, transcription factor binding`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN9525_c0_g1","roots S.abrotanoides","roots S. yangii",-1.61813979270779,"0.00166278403844767","0.0032985338174133","TRINITY_DN9525_c0_g1_i1","CYSP_TRYBB^CYSP_TRYBB^Q:342-10,H:44-154^36.04%ID^E:3e-11^RecName: Full=Cysteine proteinase;^Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma",".","TRINITY_DN9525_c0_g1_i1.p1","1-342[-]","CYSP_PEA^CYSP_PEA^Q:1-113,H:51-162^37.72%ID^E:5e-14^RecName: Full=Cysteine proteinase 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^1-54^E:3.1e-07`PF00112.20^Peptidase_C1^Papain family cysteine protease^82-114^E:1.5e-07",".",".",".",".","GO:0008234^molecular_function^cysteine-type peptidase activity","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN44443_c0_g1","roots S.abrotanoides","roots S. yangii",-1.63795534043096,"0.000233682254210096","0.000523475977301715","TRINITY_DN44443_c0_g1_i1","ACCH3_ARATH^ACCH3_ARATH^Q:691-143,H:186-369^58.7%ID^E:1e-110^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ACCH3_ARATH^ACCH3_ARATH^Q:1191-682,H:12-188^54.8%ID^E:1e-110^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44443_c0_g1_i1.p1","679-1215[-]","ACCH3_SOLLC^ACCH3_SOLLC^Q:9-178,H:12-183^52.33%ID^E:3e-61^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^56-156^E:1.8e-16",".",".","COG3491^2OGFe(II) oxygenase","KEGG:sly:101268031","GO:0031418^molecular_function^L-ascorbic acid binding`GO:0046872^molecular_function^metal ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0009693^biological_process^ethylene biosynthetic process`GO:0009835^biological_process^fruit ripening",".",".","."]
["TRINITY_DN36994_c0_g1","roots S.abrotanoides","roots S. yangii",-1.66364344531797,"0.000107470216205819","0.000251303482384032","TRINITY_DN36994_c0_g1_i1","MIEL1_ARATH^MIEL1_ARATH^Q:205-999,H:3-267^81.89%ID^E:7e-163^RecName: Full=E3 ubiquitin-protein ligase MIEL1 {ECO:0000303|PubMed:23403577};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36994_c0_g1_i1.p1","193-1002[+]","MIEL1_ARATH^MIEL1_ARATH^Q:3-269,H:1-267^82.02%ID^E:4e-167^RecName: Full=E3 ubiquitin-protein ligase MIEL1 {ECO:0000303|PubMed:23403577};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05495.9^zf-CHY^CHY zinc finger^20-100^E:2.2e-20`PF13639.3^zf-RING_2^Ring finger domain^154-197^E:1.6e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^155-195^E:2.5e-06`PF14599.3^zinc_ribbon_6^Zinc-ribbon^202-260^E:1.3e-27",".",".","ENOG410XXHF^ring finger and CHY zinc finger","KEGG:ath:AT5G18650`KO:K10144","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0016874^molecular_function^ligase activity`GO:0008134^molecular_function^transcription factor binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0006952^biological_process^defense response`GO:1900425^biological_process^negative regulation of defense response to bacterium`GO:1901485^biological_process^positive regulation of transcription factor catabolic process`GO:0016567^biological_process^protein ubiquitination","GO:0008270^molecular_function^zinc ion binding`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN39079_c0_g1","roots S.abrotanoides","roots S. yangii",-1.66972702615106,"0.00218460613608699","0.00425633359238593","TRINITY_DN39079_c0_g1_i1","GL21_ORYSJ^GL21_ORYSJ^Q:119-487,H:27-149^72.36%ID^E:5e-60^RecName: Full=Putative germin-like protein 2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN39079_c0_g1_i1.p1","44-487[+]","GL21_ORYSJ^GL21_ORYSJ^Q:1-148,H:1-149^67.79%ID^E:6e-66^RecName: Full=Putative germin-like protein 2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00190.19^Cupin_1^Cupin^60-148^E:1.4e-27","sigP:1^20^0.877^YES",".","ENOG410YERY^nutrient reservoir activity","KEGG:osa:4329389","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0030145^molecular_function^manganese ion binding`GO:0045735^molecular_function^nutrient reservoir activity`GO:0046564^molecular_function^oxalate decarboxylase activity`GO:0033609^biological_process^oxalate metabolic process","GO:0045735^molecular_function^nutrient reservoir activity",".","."]
["TRINITY_DN24646_c0_g1","roots S.abrotanoides","roots S. yangii",-1.69665672281364,"0.00133637564733411","0.00269056578485101","TRINITY_DN24646_c0_g1_i1","E70B1_ARATH^E70B1_ARATH^Q:1517-12,H:96-592^35.54%ID^E:4e-101^RecName: Full=Exocyst complex component EXO70B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN24646_c0_g1_i1.p1","3-1844[-]","E70B1_ARATH^E70B1_ARATH^Q:110-611,H:96-592^35.54%ID^E:4e-101^RecName: Full=Exocyst complex component EXO70B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03081.12^Exo70^Exo70 exocyst complex subunit^263-612^E:1.3e-102",".",".","ENOG410YIGI^exocyst complex","KEGG:ath:AT5G58430","GO:0005829^cellular_component^cytosol`GO:0000145^cellular_component^exocyst`GO:0070062^cellular_component^extracellular exosome`GO:0045335^cellular_component^phagocytic vesicle`GO:0005886^cellular_component^plasma membrane`GO:0006887^biological_process^exocytosis","GO:0006887^biological_process^exocytosis`GO:0000145^cellular_component^exocyst",".","."]
["TRINITY_DN44524_c0_g2","roots S.abrotanoides","roots S. yangii",-1.71703233115842,"0.000558855976952352","0.00119007658349407","TRINITY_DN44524_c0_g2_i1","COL12_ARATH^COL12_ARATH^Q:132-1364,H:2-357^37.56%ID^E:2e-68^RecName: Full=Zinc finger protein CONSTANS-LIKE 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44524_c0_g2_i1.p1","126-1391[+]","COL12_ARATH^COL12_ARATH^Q:3-413,H:2-357^37.38%ID^E:1e-70^RecName: Full=Zinc finger protein CONSTANS-LIKE 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06203.11^CCT^CCT motif^363-405^E:1e-16",".",".","ENOG410YKC1^zinc finger","KEGG:ath:AT3G21880","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43299_c0_g1","roots S.abrotanoides","roots S. yangii",-1.72574840680399,"0.0298012085300544","0.0471290223872679","TRINITY_DN43299_c0_g1_i1","5MAT1_SALSN^5MAT1_SALSN^Q:359-3,H:9-125^58.82%ID^E:1e-39^RecName: Full=Malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase {ECO:0000303|PubMed:11598135};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN43299_c0_g1_i1.p1","3-380[-]","5MAT1_SALSN^5MAT1_SALSN^Q:8-126,H:9-125^58.82%ID^E:1e-39^RecName: Full=Malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase {ECO:0000303|PubMed:11598135};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF02458.12^Transferase^Transferase family^12-80^E:0.00012",".",".",".","KEGG:ag:AAL50566`KO:K12934","GO:0033810^molecular_function^anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity`GO:0009718^biological_process^anthocyanin-containing compound biosynthetic process`GO:0009698^biological_process^phenylpropanoid metabolic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN45298_c0_g5","roots S.abrotanoides","roots S. yangii",-1.72746794783191,"0.000397029869095668","0.000864447599162692","TRINITY_DN45298_c0_g5_i1","R1B13_SOLDE^R1B13_SOLDE^Q:15-317,H:994-1098^35.24%ID^E:5e-07^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45298_c0_g5_i1.p1","3-317[+]","R1B13_SOLDE^R1B13_SOLDE^Q:5-105,H:994-1098^35.24%ID^E:4e-07^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN44865_c3_g4","roots S.abrotanoides","roots S. yangii",-1.73500262669543,"0.00650896768104776","0.0116873636640419","TRINITY_DN44865_c3_g4_i1","PPR38_ARATH^PPR38_ARATH^Q:205-651,H:70-217^40.27%ID^E:6e-30^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:184-651,H:273-427^26.28%ID^E:2e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:199-651,H:313-462^26.32%ID^E:5e-09^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:184-651,H:378-532^25%ID^E:7e-07^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44865_c3_g4_i1.p1","52-651[+]","PPR38_ARATH^PPR38_ARATH^Q:52-200,H:70-217^40.27%ID^E:3e-30^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:45-198,H:343-495^25.97%ID^E:6e-12^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:45-200,H:273-427^26.28%ID^E:2e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:50-200,H:313-462^26.32%ID^E:3e-09^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:45-200,H:378-532^25%ID^E:5e-07^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^45-64^E:0.49`PF13812.3^PPR_3^Pentatricopeptide repeat domain^57-98^E:0.00063`PF13041.3^PPR_2^PPR repeat family^68-116^E:5.8e-09`PF01535.17^PPR^PPR repeat^75-100^E:0.34`PF13041.3^PPR_2^PPR repeat family^138-188^E:5.2e-08`PF01535.17^PPR^PPR repeat^142-167^E:0.0093`PF01535.17^PPR^PPR repeat^181-199^E:0.2",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12700","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN42310_c0_g2","roots S.abrotanoides","roots S. yangii",-1.74150380812903,{"v":5975775726.46143,"d":"5.98E+09"},"0.000144457292048481","TRINITY_DN42310_c0_g2_i1","STY46_ARATH^STY46_ARATH^Q:448-1281,H:274-542^40.07%ID^E:4e-50^RecName: Full=Serine/threonine-protein kinase STY46 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42310_c0_g2_i1.p1","43-1332[+]","STY8_ARATH^STY8_ARATH^Q:98-413,H:241-538^35.85%ID^E:2e-52^RecName: Full=Serine/threonine-protein kinase STY8 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^27-91^E:3.1e-09`PF13857.3^Ank_5^Ankyrin repeats (many copies)^46-98^E:1.1e-07`PF13606.3^Ank_3^Ankyrin repeat^60-89^E:1e-05`PF00023.27^Ank^Ankyrin repeat^60-91^E:7e-05`PF13637.3^Ank_4^Ankyrin repeats (many copies)^61-98^E:4.4e-07`PF00069.22^Pkinase^Protein kinase domain^154-408^E:3.1e-56`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^156-410^E:3.7e-63",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G17700","GO:0005829^cellular_component^cytosol`GO:0016597^molecular_function^amino acid binding`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0004712^molecular_function^protein serine/threonine/tyrosine kinase activity`GO:0009658^biological_process^chloroplast organization","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN36473_c2_g1","roots S.abrotanoides","roots S. yangii",-1.75760916761377,"0.0147680787730002","0.0248037322070449","TRINITY_DN36473_c2_g1_i1","HSP83_IPONI^HSP83_IPONI^Q:390-1,H:7-136^83.08%ID^E:7e-70^RecName: Full=Heat shock protein 83;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN36473_c2_g1_i1.p1","1-417[-]","HSP83_IPONI^HSP83_IPONI^Q:10-139,H:7-136^83.08%ID^E:6e-70^RecName: Full=Heat shock protein 83;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF13589.3^HATPase_c_3^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^33-138^E:1.6e-07`PF02518.23^HATPase_c^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^35-135^E:2e-13",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".",".","."]
["TRINITY_DN47706_c1_g1","roots S.abrotanoides","roots S. yangii",-1.78047386043609,"0.00297791344010431","0.0056815212994165","TRINITY_DN47706_c1_g1_i5","GLR27_ARATH^GLR27_ARATH^Q:3278-744,H:27-882^52.66%ID^E:0^RecName: Full=Glutamate receptor 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47706_c1_g1_i5.p1","432-3335[-]","GLR27_ARATH^GLR27_ARATH^Q:20-947,H:27-952^49.43%ID^E:0^RecName: Full=Glutamate receptor 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13458.3^Peripla_BP_6^Periplasmic binding protein^33-289^E:1.7e-18`PF01094.25^ANF_receptor^Receptor family ligand binding region^52-381^E:7.8e-66`PF10613.6^Lig_chan-Glu_bd^Ligated ion channel L-glutamate- and glycine-binding site^456-544^E:1.1e-09`PF00497.17^SBP_bac_3^Bacterial extracellular solute-binding proteins, family 3^475-783^E:2.4e-21`PF00060.23^Lig_chan^Ligand-gated ion channel^561-814^E:3.7e-35","sigP:1^25^0.77^YES",".","ENOG410XQQV^glutamate receptor","KEGG:ath:AT2G29120","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0005262^molecular_function^calcium channel activity`GO:0008066^molecular_function^glutamate receptor activity`GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0019722^biological_process^calcium-mediated signaling`GO:0071230^biological_process^cellular response to amino acid stimulus","GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0005234^molecular_function^extracellular-glutamate-gated ion channel activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN8166_c0_g2","roots S.abrotanoides","roots S. yangii",-1.78138444740122,"0.0071851954715035","0.0128061202187459","TRINITY_DN8166_c0_g2_i1","BZP43_ARATH^BZP43_ARATH^Q:5-286,H:68-163^66.67%ID^E:3e-36^RecName: Full=Basic leucine zipper 43 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN8166_c0_g2_i1.p1","2-310[+]","BZP43_ARATH^BZP43_ARATH^Q:2-95,H:68-163^66.67%ID^E:2e-37^RecName: Full=Basic leucine zipper 43 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07716.12^bZIP_2^Basic region leucine zipper^4-50^E:1.5e-09`PF00170.18^bZIP_1^bZIP transcription factor^6-64^E:1.6e-14`PF03131.14^bZIP_Maf^bZIP Maf transcription factor^6-67^E:0.00017",".",".","ENOG410YWTI^Transcription factor","KEGG:ath:AT5G38800","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0003677^molecular_function^DNA binding`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN45116_c1_g1","roots S.abrotanoides","roots S. yangii",-1.80254034995463,0,0,"TRINITY_DN45116_c1_g1_i1","DNJH_CUCSA^DNJH_CUCSA^Q:1644-391,H:1-413^85.65%ID^E:0^RecName: Full=DnaJ protein homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN45116_c1_g1_i1.p1","388-1644[-]","DNJH_ATRNU^DNJH_ATRNU^Q:1-418,H:1-417^84.25%ID^E:0^RecName: Full=DnaJ protein homolog ANJ1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Atripliceae; Atriplex","PF00226.28^DnaJ^DnaJ domain^13-71^E:7.6e-22`PF01556.15^DnaJ_C^DnaJ C terminal domain^122-343^E:3.5e-38`PF00684.16^DnaJ_CXXCXGXG^DnaJ central domain^148-214^E:4.4e-15",".",".",".",".","GO:0016020^cellular_component^membrane`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0006457^biological_process^protein folding`GO:0009408^biological_process^response to heat","GO:0031072^molecular_function^heat shock protein binding`GO:0051082^molecular_function^unfolded protein binding",".","."]
["TRINITY_DN44388_c1_g1","roots S.abrotanoides","roots S. yangii",-1.80838448403824,"0.000149624307295976","0.000343605882317487","TRINITY_DN44388_c1_g1_i1","HSP83_ORYSJ^HSP83_ORYSJ^Q:2-409,H:289-424^86.03%ID^E:5e-79^RecName: Full=Heat shock protein 81-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44388_c1_g1_i1.p1","2-409[+]","HSP83_ORYSJ^HSP83_ORYSJ^Q:1-136,H:289-424^86.03%ID^E:4e-79^RecName: Full=Heat shock protein 81-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00183.15^HSP90^Hsp90 protein^1-136^E:1.1e-70",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:osa:4347405`KEGG:osa:9267802`KO:K04079","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN20786_c0_g1","roots S.abrotanoides","roots S. yangii",-1.81223791298631,"0.0022839537080779","0.00443628436269757","TRINITY_DN20786_c0_g1_i1","BEE1_ARATH^BEE1_ARATH^Q:373-669,H:142-240^82.83%ID^E:1e-51^RecName: Full=Transcription factor BEE 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN20786_c0_g1_i1.p1","40-750[+]","BEE3_ARATH^BEE3_ARATH^Q:8-210,H:20-242^47.56%ID^E:3e-55^RecName: Full=Transcription factor BEE 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^125-172^E:1.4e-06",".",".","ENOG410YIJY^Transcription factor",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN43900_c1_g1","roots S.abrotanoides","roots S. yangii",-1.82852997448925,"0.00018473528952523","0.000418764296983974","TRINITY_DN43900_c1_g1_i2","LAHY_LARTR^LAHY_LARTR^Q:1915-290,H:5-563^46.23%ID^E:3e-154^RecName: Full=(+)-larreatricin hydroxylase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Zygophyllales; Zygophyllaceae; Larreoideae; Larrea",".","TRINITY_DN43900_c1_g1_i2.p1","218-1984[-]","LAHY_LARTR^LAHY_LARTR^Q:24-578,H:5-576^46.23%ID^E:5e-160^RecName: Full=(+)-larreatricin hydroxylase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Zygophyllales; Zygophyllaceae; Larreoideae; Larrea","PF00264.17^Tyrosinase^Common central domain of tyrosinase^172-377^E:4.6e-33`PF12142.5^PPO1_DWL^Polyphenol oxidase middle domain^389-438^E:1.9e-21`PF12143.5^PPO1_KFDV^Protein of unknown function (DUF_B2219)^461-578^E:2.3e-32",".",".",".",".","GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0004097^molecular_function^catechol oxidase activity`GO:0046872^molecular_function^metal ion binding`GO:1901708^biological_process^(+)-3'-hydroxylarreatricin biosynthetic process`GO:1901709^biological_process^(+)-larreatricin metabolic process`GO:0046148^biological_process^pigment biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process`GO:0004097^molecular_function^catechol oxidase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN37174_c0_g2","roots S.abrotanoides","roots S. yangii",-1.84304625866397,"0.00523039551082688","0.00955694872920409","TRINITY_DN37174_c0_g2_i1","RS51_ARATH^RS51_ARATH^Q:21-470,H:51-200^82.67%ID^E:7e-91^RecName: Full=40S ribosomal protein S5-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37174_c0_g2_i1.p1","3-470[+]","RS51_ARATH^RS51_ARATH^Q:7-156,H:51-200^82.67%ID^E:7e-91^RecName: Full=40S ribosomal protein S5-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00177.18^Ribosomal_S7^Ribosomal protein S7p/S5e^19-155^E:1.3e-33",".",".","COG0049^One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity)","KEGG:ath:AT2G37270`KO:K02989","GO:0005618^cellular_component^cell wall`GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0022626^cellular_component^cytosolic ribosome`GO:0022627^cellular_component^cytosolic small ribosomal subunit`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005774^cellular_component^vacuolar membrane`GO:0003729^molecular_function^mRNA binding`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009735^biological_process^response to cytokinin`GO:0000028^biological_process^ribosomal small subunit assembly`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN46088_c3_g3","roots S.abrotanoides","roots S. yangii",-1.85847976346488,"0.000251133773380586","0.000560591895983619","TRINITY_DN46088_c3_g3_i2","ODO1_PETHY^ODO1_PETHY^Q:1-111,H:92-128^83.78%ID^E:1e-14^RecName: Full=Protein ODORANT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN46088_c3_g3_i2.p1","1-669[+]","MYB39_ARATH^MYB39_ARATH^Q:1-50,H:93-146^66.67%ID^E:6e-16^RecName: Full=Transcription factor MYB39;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT4G17785`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN22956_c0_g1","roots S.abrotanoides","roots S. yangii",-1.87781084145892,{"v":669313669.82503,"d":"6.69E+08"},"0.000160733074762193","TRINITY_DN22956_c0_g1_i1","DRL28_ARATH^DRL28_ARATH^Q:1782-496,H:495-892^24.83%ID^E:6e-14^RecName: Full=Probable disease resistance protein At4g27220;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22956_c0_g1_i1.p1","409-1968[-]","DRL28_ARATH^DRL28_ARATH^Q:63-491,H:495-892^24.83%ID^E:2e-14^RecName: Full=Probable disease resistance protein At4g27220;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^66-119^E:8.7e-10",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G27220","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44014_c4_g3","roots S.abrotanoides","roots S. yangii",-1.87949203547928,"0.00812355013282031","0.0143349596985838","TRINITY_DN44014_c4_g3_i1","RL131_ARATH^RL131_ARATH^Q:19-315,H:1-99^69.7%ID^E:1e-31^RecName: Full=60S ribosomal protein L13-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44014_c4_g3_i1.p1","1-315[+]","RL131_ARATH^RL131_ARATH^Q:7-105,H:1-99^69.7%ID^E:2e-41^RecName: Full=60S ribosomal protein L13-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01294.15^Ribosomal_L13e^Ribosomal protein L13e^12-105^E:1.5e-45",".",".","COG4352^cytoplasmic translation","KEGG:ath:AT3G49010`KO:K02873","GO:0005618^cellular_component^cell wall`GO:0005829^cellular_component^cytosol`GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0005730^cellular_component^nucleolus`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005774^cellular_component^vacuolar membrane`GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009735^biological_process^response to cytokinin`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45356_c2_g3","roots S.abrotanoides","roots S. yangii",-1.89540846491447,{"v":8373656698.43081,"d":"8.37E+09"},"0.000198766750327802","TRINITY_DN45356_c2_g3_i1","R1A6_SOLDE^R1A6_SOLDE^Q:42-1406,H:507-976^34.8%ID^E:4e-71^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45356_c2_g3_i1.p1","78-1406[+]","R1A6_SOLDE^R1A6_SOLDE^Q:2-443,H:524-976^35%ID^E:7e-74^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^14-288^E:5.8e-73",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN11938_c0_g1","roots S.abrotanoides","roots S. yangii",-1.89868465256921,"0.000300488811161653","0.00066460523016447","TRINITY_DN11938_c0_g1_i1","PRU1_PRUAV^PRU1_PRUAV^Q:1-360,H:7-126^50.41%ID^E:3e-33^RecName: Full=Major allergen Pru av 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN11938_c0_g1_i1.p1","1-378[+]","PRU1_PRUAV^PRU1_PRUAV^Q:1-120,H:7-126^50.41%ID^E:3e-33^RecName: Full=Major allergen Pru av 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^6-122^E:6.7e-19",".",".",".",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN28799_c0_g1","roots S.abrotanoides","roots S. yangii",-1.91297303200271,{"v":8314049074.51712,"d":"8.31E+09"},"0.000197482129251246","TRINITY_DN28799_c0_g1_i1","MOB1A_MEDSF^MOB1A_MEDSF^Q:62-703,H:1-214^84.58%ID^E:3e-135^RecName: Full=MOB kinase activator-like 1A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN28799_c0_g1_i1.p1","2-709[+]","MOB1A_MEDSF^MOB1A_MEDSF^Q:21-234,H:1-214^84.58%ID^E:4e-136^RecName: Full=MOB kinase activator-like 1A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF03637.14^Mob1_phocein^Mob1/phocein family^55-224^E:1.8e-74",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0009524^cellular_component^phragmoplast`GO:0046872^molecular_function^metal ion binding",".",".","."]
["TRINITY_DN45033_c6_g2","roots S.abrotanoides","roots S. yangii",-1.9171528309065,"0.000126158078473762","0.000292772663674035","TRINITY_DN45033_c6_g2_i15","VESTR_MEDSA^VESTR_MEDSA^Q:2141-1311,H:3-278^53.07%ID^E:6e-95^RecName: Full=Vestitone reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN45033_c6_g2_i15.p1","1302-2189[-]","VESTR_MEDSA^VESTR_MEDSA^Q:17-293,H:3-278^53.07%ID^E:1e-100^RecName: Full=Vestitone reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^22-262^E:2.8e-20`PF05368.10^NmrA^NmrA-like family^22-112^E:4e-05`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^24-253^E:6.2e-12`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^24-280^E:1.4e-10`PF07993.9^NAD_binding_4^Male sterility protein^24-221^E:9.9e-10`PF13460.3^NAD_binding_10^NAD(P)H-binding^26-208^E:9e-10",".",".",".","KEGG:ag:AAB41550`KO:K13265","GO:0050662^molecular_function^coenzyme binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0006952^biological_process^defense response`GO:0009813^biological_process^flavonoid biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN62058_c0_g1","roots S.abrotanoides","roots S. yangii",-1.94167378353595,"0.0144579013149905","0.0243339690766911","TRINITY_DN62058_c0_g1_i1","Y3471_ARATH^Y3471_ARATH^Q:3-299,H:772-883^50%ID^E:4e-30^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN62058_c0_g1_i1.p1","3-299[+]","Y3471_ARATH^Y3471_ARATH^Q:1-99,H:772-883^50%ID^E:4e-30^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^1-98^E:2.1e-19`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^1-97^E:1.4e-18",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47110","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN57748_c0_g1","roots S.abrotanoides","roots S. yangii",-1.96214878890263,"0.000203757881622595","0.000459425352680513","TRINITY_DN57748_c0_g1_i1","GLPT4_ARATH^GLPT4_ARATH^Q:1691-138,H:3-543^66.18%ID^E:0^RecName: Full=Putative glycerol-3-phosphate transporter 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN57748_c0_g1_i1.p1","129-1808[-]","GLPT4_ARATH^GLPT4_ARATH^Q:40-558,H:3-544^66.24%ID^E:0^RecName: Full=Putative glycerol-3-phosphate transporter 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^142-459^E:2e-33`PF07690.13^MFS_1^Major Facilitator Superfamily^373-526^E:1.3e-11",".",".","COG2271^transporter","KEGG:ath:AT4G17550`KO:K13783","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0022857^molecular_function^transmembrane transporter activity`GO:0006820^biological_process^anion transport`GO:0008643^biological_process^carbohydrate transport`GO:0055062^biological_process^phosphate ion homeostasis`GO:0055085^biological_process^transmembrane transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN97099_c0_g1","roots S.abrotanoides","roots S. yangii",-1.99912230537556,"0.0033533778827461","0.00634457823820482","TRINITY_DN97099_c0_g1_i1","AB23G_ARATH^AB23G_ARATH^Q:383-9,H:465-584^30.71%ID^E:3e-07^RecName: Full=ABC transporter G family member 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN97099_c0_g1_i1.p1","3-386[-]","AB23G_ARATH^AB23G_ARATH^Q:2-126,H:465-584^30.71%ID^E:2e-10^RecName: Full=ABC transporter G family member 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01061.21^ABC2_membrane^ABC-2 type transporter^4-94^E:1.3e-17",".",".","COG1131^(ABC) transporter","KEGG:ath:AT5G19410","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0055085^biological_process^transmembrane transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46064_c3_g2","roots S.abrotanoides","roots S. yangii",-2.0325319260482,"0.000812770292306187","0.00168882388170798","TRINITY_DN46064_c3_g2_i1","POLX_TOBAC^POLX_TOBAC^Q:1766-990,H:452-708^36.26%ID^E:7e-40^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:569-75,H:804-971^44.64%ID^E:3e-37^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46064_c3_g2_i1.p1","3-686[-]","POLX_TOBAC^POLX_TOBAC^Q:35-227,H:799-994^40.31%ID^E:1e-41^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF07727.11^RVT_2^Reverse transcriptase (RNA-dependent DNA polymerase)^74-227^E:3.7e-62",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration",".",".","."]
["TRINITY_DN78004_c0_g1","roots S.abrotanoides","roots S. yangii",-2.05439111230506,"0.0107275671572915","0.018500663462343","TRINITY_DN78004_c0_g1_i1","RL31_ARATH^RL31_ARATH^Q:346-2,H:151-266^72.41%ID^E:7e-47^RecName: Full=60S ribosomal protein L3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN78004_c0_g1_i1.p2","2-346[-]","RL31_ARATH^RL31_ARATH^Q:1-115,H:151-266^72.41%ID^E:2e-55^RecName: Full=60S ribosomal protein L3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00297.19^Ribosomal_L3^Ribosomal protein L3^2-115^E:8.5e-52",".",".","COG0087^One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity)","KEGG:ath:AT1G43170`KO:K02925","GO:0005618^cellular_component^cell wall`GO:0005829^cellular_component^cytosol`GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0005730^cellular_component^nucleolus`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN16438_c0_g1","roots S.abrotanoides","roots S. yangii",-2.06569823618624,"0.00192622670086894","0.00378485937053298","TRINITY_DN16438_c0_g1_i1","MSSP2_ARATH^MSSP2_ARATH^Q:340-2436,H:17-728^65.89%ID^E:0^RecName: Full=Monosaccharide-sensing protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN16438_c0_g1_i1.p1","292-2439[+]","MSSP2_ARATH^MSSP2_ARATH^Q:1-715,H:1-728^66.08%ID^E:0^RecName: Full=Monosaccharide-sensing protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^7-228^E:1e-54`PF07690.13^MFS_1^Major Facilitator Superfamily^12-198^E:1.3e-24`PF00083.21^Sugar_tr^Sugar (and other) transporter^472-702^E:1.7e-42",".",".","ENOG410XNQK^Transporter","KEGG:ath:AT4G35300","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005887^cellular_component^integral component of plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0005355^molecular_function^glucose transmembrane transporter activity`GO:0022891^molecular_function^substrate-specific transmembrane transporter activity`GO:0005351^molecular_function^sugar:proton symporter activity`GO:0008643^biological_process^carbohydrate transport`GO:0046323^biological_process^glucose import`GO:1904659^biological_process^glucose transmembrane transport`GO:0035428^biological_process^hexose transmembrane transport`GO:0015992^biological_process^proton transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN43497_c3_g1","roots S.abrotanoides","roots S. yangii",-2.0687187522156,{"v":8026125979.94694,"d":"8.03E+09"},"0.000191036703301557","TRINITY_DN43497_c3_g1_i7","PCLL_ARATH^PCLL_ARATH^Q:385-212,H:143-199^55.17%ID^E:7e-13^RecName: Full=Transcription factor BOA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43497_c3_g1_i7.p1","62-1102[-]","ARR18_ARATH^ARR18_ARATH^Q:236-302,H:192-257^53.73%ID^E:3e-14^RecName: Full=Two-component response regulator ARR18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^240-291^E:5e-08",".",".","COG5641^Transcription factor","KEGG:ath:AT5G58080`KO:K14491","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009736^biological_process^cytokinin-activated signaling pathway`GO:0000160^biological_process^phosphorelay signal transduction system`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47163_c5_g1","roots S.abrotanoides","roots S. yangii",-2.07757961366586,"0.00334562246698938","0.00633119115138167","TRINITY_DN47163_c5_g1_i1","HAC5_ARATH^HAC5_ARATH^Q:886-5,H:1226-1525^51.67%ID^E:6e-102^RecName: Full=Histone acetyltransferase HAC5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47163_c5_g1_i1.p1","2-886[-]","HAC5_ARATH^HAC5_ARATH^Q:1-294,H:1226-1525^51.67%ID^E:6e-102^RecName: Full=Histone acetyltransferase HAC5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08214.8^HAT_KAT11^Histone acetylation protein^3-101^E:2.1e-07",".",".","ENOG4111K0H^histone acetyltransferase activity","KEGG:ath:AT3G12980`KO:K04498","GO:0005634^cellular_component^nucleus`GO:0004402^molecular_function^histone acetyltransferase activity`GO:0003712^molecular_function^transcription cofactor activity`GO:0008270^molecular_function^zinc ion binding`GO:0009908^biological_process^flower development`GO:0006473^biological_process^protein acetylation`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0004402^molecular_function^histone acetyltransferase activity`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0016573^biological_process^histone acetylation",".","."]
["TRINITY_DN31547_c0_g1","roots S.abrotanoides","roots S. yangii",-2.13160299242579,"0.000176262749933348","0.000400761452997614","TRINITY_DN31547_c0_g1_i1","GH31_ARATH^GH31_ARATH^Q:41-676,H:376-588^75.12%ID^E:5e-114^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN31547_c0_g1_i1.p2","2-682[+]","GH31_ARATH^GH31_ARATH^Q:14-225,H:376-588^75.12%ID^E:5e-114^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03321.10^GH3^GH3 auxin-responsive promoter^8-196^E:1.3e-71",".",".","ENOG410XQH0^Indole-3-acetic acid-amido synthetase","KEGG:ath:AT2G14960`KO:K14487","GO:0016874^molecular_function^ligase activity`GO:0009733^biological_process^response to auxin",".",".","."]
["TRINITY_DN45590_c0_g1","roots S.abrotanoides","roots S. yangii",-2.13201098083319,"0.000451478202590236","0.000974991800172246","TRINITY_DN45590_c0_g1_i1","RNZN_WHEAT^RNZN_WHEAT^Q:135-1,H:7-51^68.89%ID^E:9e-17^RecName: Full=Nuclear ribonuclease Z;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".","TRINITY_DN45590_c0_g1_i1.p1","1-480[-]","RNZN_WHEAT^RNZN_WHEAT^Q:116-160,H:7-51^68.89%ID^E:5e-17^RecName: Full=Nuclear ribonuclease Z;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".",".",".",".",".","GO:0005634^cellular_component^nucleus`GO:0004519^molecular_function^endonuclease activity`GO:0046872^molecular_function^metal ion binding`GO:0008033^biological_process^tRNA processing",".",".","."]
["TRINITY_DN46578_c2_g1","roots S.abrotanoides","roots S. yangii",-2.13760752337688,"0.000178315057486713","0.000405196895025719","TRINITY_DN46578_c2_g1_i16","ACT_PINCO^ACT_PINCO^Q:7-363,H:19-137^83.19%ID^E:4e-68^RecName: Full=Actin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Pinales; Pinaceae; Pinus; Pinus",".","TRINITY_DN46578_c2_g1_i16.p1","1-363[+]","ACT_PINCO^ACT_PINCO^Q:3-121,H:19-137^83.19%ID^E:4e-68^RecName: Full=Actin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Pinales; Pinaceae; Pinus; Pinus","PF00022.16^Actin^Actin^3-121^E:1.5e-45",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN65670_c0_g1","roots S.abrotanoides","roots S. yangii",-2.15152533685997,"0.000164872126307236","0.000376456000747772","TRINITY_DN65670_c0_g1_i1","FBK67_ARATH^FBK67_ARATH^Q:53-745,H:17-287^25%ID^E:1e-07^RecName: Full=F-box/kelch-repeat protein At3g23880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN65670_c0_g1_i1.p1","35-934[+]","FBK67_ARATH^FBK67_ARATH^Q:7-237,H:17-287^25%ID^E:4e-10^RecName: Full=F-box/kelch-repeat protein At3g23880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^3-41^E:1.5e-08",".",".","ENOG410Z2HM^F-box Kelch-repeat protein","KEGG:ath:AT3G23880","GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN102920_c0_g1","roots S.abrotanoides","roots S. yangii",-2.15834826143868,"0.00133779491102443","0.00269303513032664","TRINITY_DN102920_c0_g1_i1","RA211_ARATH^RA211_ARATH^Q:685-587,H:59-91^69.7%ID^E:3e-06^RecName: Full=Ethylene-responsive transcription factor RAP2-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN102920_c0_g1_i1.p1","206-685[-]","RA211_ARATH^RA211_ARATH^Q:1-159,H:59-251^35.57%ID^E:3e-21^RecName: Full=Ethylene-responsive transcription factor RAP2-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YYMH^Transcription factor","KEGG:ath:AT5G19790`KO:K09286","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0035865^biological_process^cellular response to potassium ion`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0048528^biological_process^post-embryonic root development`GO:0009723^biological_process^response to ethylene`GO:0000302^biological_process^response to reactive oxygen species`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46972_c4_g8","roots S.abrotanoides","roots S. yangii",-2.20251876986007,"0.00595964429068878","0.0107820785499958","TRINITY_DN46972_c4_g8_i1","MY108_ARATH^MY108_ARATH^Q:3-164,H:99-152^64.81%ID^E:2e-17^RecName: Full=Transcription factor MYB108;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46972_c4_g8_i1.p1","3-533[+]","MY108_ARATH^MY108_ARATH^Q:1-54,H:99-152^64.81%ID^E:4e-18^RecName: Full=Transcription factor MYB108;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT3G06490`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006952^biological_process^defense response`GO:0009737^biological_process^response to abscisic acid`GO:0009723^biological_process^response to ethylene`GO:0009620^biological_process^response to fungus`GO:0009753^biological_process^response to jasmonic acid`GO:0009651^biological_process^response to salt stress`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44497_c0_g1","roots S.abrotanoides","roots S. yangii",-2.20586478833051,"0.00131791688883896","0.00265646485291078","TRINITY_DN44497_c0_g1_i2","COL2_ARATH^COL2_ARATH^Q:22-1041,H:1-347^46.83%ID^E:6e-72^RecName: Full=Zinc finger protein CONSTANS-LIKE 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44497_c0_g1_i2.p1","1-1044[+]","COL2_ARATH^COL2_ARATH^Q:8-347,H:1-347^48.19%ID^E:3e-99^RecName: Full=Zinc finger protein CONSTANS-LIKE 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00643.21^zf-B_box^B-box zinc finger^58-102^E:4.2e-07`PF06203.11^CCT^CCT motif^276-318^E:4.6e-17",".",".","COG5641^Transcription factor","KEGG:ath:AT3G02380","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0009658^biological_process^chloroplast organization`GO:0009909^biological_process^regulation of flower development`GO:0009416^biological_process^response to light stimulus`GO:0006351^biological_process^transcription, DNA-templated","GO:0008270^molecular_function^zinc ion binding`GO:0005622^cellular_component^intracellular`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47329_c0_g3","roots S.abrotanoides","roots S. yangii",-2.3005306879552,{"v":4718284422.90571,"d":"4.72E+09"},"0.000115704392715823","TRINITY_DN47329_c0_g3_i2","SAPK1_ORYSJ^SAPK1_ORYSJ^Q:3-443,H:163-307^70.75%ID^E:1e-67^RecName: Full=Serine/threonine-protein kinase SAPK1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47329_c0_g3_i2.p1","3-545[+]","SAPK2_ORYSI^SAPK2_ORYSI^Q:1-180,H:163-339^64.64%ID^E:5e-71^RecName: Full=Serine/threonine-protein kinase SAPK2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00069.22^Pkinase^Protein kinase domain^2-98^E:1.8e-21`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^3-94^E:4.4e-07",".",".","COG0515^Serine Threonine protein kinase",".","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46152_c1_g2","roots S.abrotanoides","roots S. yangii",-2.3188021047467,"0.00436377441543316","0.00809469045669771","TRINITY_DN46152_c1_g2_i1","CRK2_ARATH^CRK2_ARATH^Q:224-787,H:17-204^51.06%ID^E:2e-63^RecName: Full=Cysteine-rich receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46152_c1_g2_i1.p1","32-787[+]","CRK2_ARATH^CRK2_ARATH^Q:65-252,H:17-204^51.06%ID^E:1e-63^RecName: Full=Cysteine-rich receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01657.14^Stress-antifung^Salt stress response/antifungal^94-180^E:1.1e-13",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G70520","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006952^biological_process^defense response`GO:0046777^biological_process^protein autophosphorylation`GO:0010193^biological_process^response to ozone",".",".","."]
["TRINITY_DN15193_c1_g1","roots S.abrotanoides","roots S. yangii",-2.35884607451178,"0.000171689220274756","0.000390999144485856","TRINITY_DN15193_c1_g1_i1","RL73_ARATH^RL73_ARATH^Q:2-490,H:80-242^70.55%ID^E:1e-78^RecName: Full=60S ribosomal protein L7-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN15193_c1_g1_i1.p1","2-493[+]","RL73_ARATH^RL73_ARATH^Q:1-163,H:80-242^70.55%ID^E:1e-87^RecName: Full=60S ribosomal protein L7-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00327.17^Ribosomal_L30^Ribosomal protein L30p/L7e^5-55^E:5.3e-24",".",".","COG1841^ribosomal large subunit biogenesis","KEGG:ath:AT2G44120`KO:K02937","GO:0005840^cellular_component^ribosome",".",".","."]
["TRINITY_DN46549_c0_g1","roots S.abrotanoides","roots S. yangii",-2.39043371064571,{"v":668507405.72445,"d":"6.69E+08"},"0.000160580858178704","TRINITY_DN46549_c0_g1_i1","PUB42_ARATH^PUB42_ARATH^Q:2123-282,H:366-1032^26.38%ID^E:5e-23^RecName: Full=Putative U-box domain-containing protein 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46549_c0_g1_i1.p1","279-2540[-]","PUB44_ARATH^PUB44_ARATH^Q:126-729,H:137-773^25.37%ID^E:3e-37^RecName: Full=U-box domain-containing protein 44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05804.9^KAP^Kinesin-associated protein (KAP)^244-572^E:7.3e-06",".",".","ENOG410XRTN^U-box domain-containing protein","KEGG:ath:AT1G20780","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0016874^molecular_function^ligase activity`GO:0070696^molecular_function^transmembrane receptor protein serine/threonine kinase binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010150^biological_process^leaf senescence`GO:0090359^biological_process^negative regulation of abscisic acid biosynthetic process`GO:0010115^biological_process^regulation of abscisic acid biosynthetic process`GO:0010380^biological_process^regulation of chlorophyll biosynthetic process`GO:0010271^biological_process^regulation of chlorophyll catabolic process",".",".","."]
["TRINITY_DN43908_c1_g3","roots S.abrotanoides","roots S. yangii",-2.430548100148,"0.00094284530328833","0.00193991462586003","TRINITY_DN43908_c1_g3_i3","DXS_CAPAN^DXS_CAPAN^Q:88-2235,H:1-719^80.06%ID^E:0^RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum",".","TRINITY_DN43908_c1_g3_i3.p1","88-2253[+]","DXS_CAPAN^DXS_CAPAN^Q:1-716,H:1-719^80.06%ID^E:0^RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum","PF13292.3^DXP_synthase_N^1-deoxy-D-xylulose-5-phosphate synthase^71-356^E:4.1e-112`PF00676.17^E1_dh^Dehydrogenase E1 component^182-242^E:2.5e-05`PF02779.21^Transket_pyr^Transketolase, pyrimidine binding domain^395-554^E:1.1e-43`PF02780.17^Transketolase_C^Transketolase, C-terminal domain^572-693^E:9e-28",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0008661^molecular_function^1-deoxy-D-xylulose-5-phosphate synthase activity`GO:0046872^molecular_function^metal ion binding`GO:0052865^biological_process^1-deoxy-D-xylulose 5-phosphate biosynthetic process`GO:0016114^biological_process^terpenoid biosynthetic process`GO:0009228^biological_process^thiamine biosynthetic process","GO:0008661^molecular_function^1-deoxy-D-xylulose-5-phosphate synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process`GO:0016624^molecular_function^oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN101314_c0_g1","roots S.abrotanoides","roots S. yangii",-2.52648359976421,"0.00560193450227268","0.010179076017949","TRINITY_DN101314_c0_g1_i1","RS15_ELAOL^RS15_ELAOL^Q:405-1,H:13-147^72.59%ID^E:2e-67^RecName: Full=40S ribosomal protein S15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis",".","TRINITY_DN101314_c0_g1_i1.p1","1-405[-]","RS15_ELAOL^RS15_ELAOL^Q:1-135,H:13-147^72.59%ID^E:1e-67^RecName: Full=40S ribosomal protein S15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis","PF00203.18^Ribosomal_S19^Ribosomal protein S19^44-124^E:3.7e-32",".",".",".",".","GO:0015935^cellular_component^small ribosomal subunit`GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46802_c4_g1","roots S.abrotanoides","roots S. yangii",-2.63993555693308,"0.00457768795360719","0.0084548637699457","TRINITY_DN46802_c4_g1_i1","CAP13_ARATH^CAP13_ARATH^Q:192-437,H:1-80^53.66%ID^E:4e-22^RecName: Full=Putative clathrin assembly protein At1g25240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46802_c4_g1_i1.p1","3-437[+]","CAP13_ARATH^CAP13_ARATH^Q:64-145,H:1-80^53.66%ID^E:2e-22^RecName: Full=Putative clathrin assembly protein At1g25240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XQ90^Clathrin assembly protein","KEGG:ath:AT1G25240","GO:0030136^cellular_component^clathrin-coated vesicle`GO:0005905^cellular_component^coated pit`GO:0005794^cellular_component^Golgi apparatus`GO:0005545^molecular_function^1-phosphatidylinositol binding`GO:0048268^biological_process^clathrin coat assembly`GO:0006897^biological_process^endocytosis",".",".","."]
["TRINITY_DN55778_c0_g1","roots S.abrotanoides","roots S. yangii",-2.67191270836358,"0.000332538472565557","0.000731425018349592","TRINITY_DN55778_c0_g1_i1","PHL1_ARATH^PHL1_ARATH^Q:333-181,H:301-351^49.02%ID^E:4e-08^RecName: Full=Protein PHR1-LIKE 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN55778_c0_g1_i1.p1","22-360[-]","PHL1_ARATH^PHL1_ARATH^Q:10-88,H:301-379^45.57%ID^E:3e-15^RecName: Full=Protein PHR1-LIKE 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14379.3^Myb_CC_LHEQLE^MYB-CC type transfactor, LHEQLE motif^28-75^E:1.8e-20",".",".","ENOG41113XD^MYB family transcription factor","KEGG:ath:AT5G29000","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45253_c4_g2","roots S.abrotanoides","roots S. yangii",-2.70785744899726,0,0,"TRINITY_DN45253_c4_g2_i3","G3PC_PETHY^G3PC_PETHY^Q:340-1218,H:1-293^93.86%ID^E:0^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN45253_c4_g2_i3.p1","340-1221[+]","G3PC_PETHY^G3PC_PETHY^Q:1-293,H:1-293^93.86%ID^E:0^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF00044.21^Gp_dh_N^Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain^4-154^E:8.3e-55`PF02800.17^Gp_dh_C^Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain^159-292^E:2.4e-62",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0004365^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity`GO:0051287^molecular_function^NAD binding`GO:0050661^molecular_function^NADP binding`GO:0006006^biological_process^glucose metabolic process`GO:0006096^biological_process^glycolytic process","GO:0016620^molecular_function^oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN64765_c0_g1","roots S.abrotanoides","roots S. yangii",-2.71880856152482,"0.000209705270235165","0.000472149472654371","TRINITY_DN64765_c0_g1_i1","SBT19_ARATH^SBT19_ARATH^Q:11-322,H:446-547^49.52%ID^E:2e-24^RecName: Full=Subtilisin-like protease SBT1.9 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN64765_c0_g1_i1.p1","2-325[+]","SBT19_ARATH^SBT19_ARATH^Q:4-107,H:446-547^49.52%ID^E:2e-24^RecName: Full=Subtilisin-like protease SBT1.9 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00082.19^Peptidase_S8^Subtilase family^26-107^E:2e-15",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT5G67090","GO:0004252^molecular_function^serine-type endopeptidase activity","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46294_c1_g2","roots S.abrotanoides","roots S. yangii",-2.78042946067453,"0.000149219126706372","0.000342731740181072","TRINITY_DN46294_c1_g2_i1","CYPH1_SALMI^CYPH1_SALMI^Q:332-3,H:366-475^67.57%ID^E:7e-47^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN46294_c1_g2_i1.p1","3-332[-]","CYPH1_SALMI^CYPH1_SALMI^Q:1-110,H:366-475^67.57%ID^E:6e-47^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF00067.19^p450^Cytochrome P450^2-106^E:7e-31",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46654_c0_g5","roots S.abrotanoides","roots S. yangii",-2.8373008260296,{"v":6384865122.31763,"d":"6.38E+09"},"0.000153713179719694","TRINITY_DN46654_c0_g5_i1","Y2913_ARATH^Y2913_ARATH^Q:1305-64,H:5-428^39.68%ID^E:7e-83^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46654_c0_g5_i1.p1","1-1308[-]","Y2913_ARATH^Y2913_ARATH^Q:2-415,H:5-428^39.68%ID^E:3e-83^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^72-178^E:1.8e-30`PF00954.17^S_locus_glycop^S-locus glycoprotein domain^210-311^E:1.3e-15`PF08276.8^PAN_2^PAN-like domain^335-394^E:7.5e-15`PF14295.3^PAN_4^PAN domain^348-384^E:0.0061","sigP:1^22^0.517^YES",".","ENOG410YEQP^serine threonine-protein kinase","KEGG:ath:AT2G19130","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen",".","."]
["TRINITY_DN45509_c0_g1","roots S.abrotanoides","roots S. yangii",-2.91616339560507,0,0,"TRINITY_DN45509_c0_g1_i20","NPP_HORVU^NPP_HORVU^Q:1654-617,H:23-368^76.01%ID^E:0^RecName: Full=Nucleotide pyrophosphatase/phosphodiesterase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN45509_c0_g1_i20.p1","614-1570[-]","NPP_HORVU^NPP_HORVU^Q:1-318,H:51-368^78.3%ID^E:0^RecName: Full=Nucleotide pyrophosphatase/phosphodiesterase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum","PF00149.25^Metallophos^Calcineurin-like phosphoesterase^15-209^E:2e-17`PF14008.3^Metallophos_C^Iron/zinc purple acid phosphatase-like protein C^234-293^E:4.9e-16",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0016787^molecular_function^hydrolase activity","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN41049_c0_g1","roots S.abrotanoides","roots S. yangii",-2.95899542663301,"0.000185888037533956","0.000421309024719036","TRINITY_DN41049_c0_g1_i5","ABAH4_ARATH^ABAH4_ARATH^Q:66-1259,H:7-398^62.06%ID^E:0^RecName: Full=Abscisic acid 8'-hydroxylase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41049_c0_g1_i5.p1","174-1280[+]","ABAH4_ARATH^ABAH4_ARATH^Q:1-362,H:39-398^66.02%ID^E:0^RecName: Full=Abscisic acid 8'-hydroxylase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^3-363^E:8.7e-57",".",".","COG2124^Cytochrome p450","KEGG:ath:AT3G19270`KO:K09843","GO:0016021^cellular_component^integral component of membrane`GO:0010295^molecular_function^(+)-abscisic acid 8'-hydroxylase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0046345^biological_process^abscisic acid catabolic process`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0010268^biological_process^brassinosteroid homeostasis`GO:0007275^biological_process^multicellular organism development`GO:0016125^biological_process^sterol metabolic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45135_c0_g1","roots S.abrotanoides","roots S. yangii",-2.9711358013309,"0.00134148275326967","0.00269968089953241","TRINITY_DN45135_c0_g1_i1","DIR11_ARATH^DIR11_ARATH^Q:273-1,H:48-137^41.76%ID^E:2e-13^RecName: Full=Dirigent protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45135_c0_g1_i1.p1","1-471[-]","DIR11_ARATH^DIR11_ARATH^Q:67-157,H:48-137^41.76%ID^E:9e-14^RecName: Full=Dirigent protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^70-155^E:8.3e-15",".",".","ENOG410YZUA^Disease resistance response protein","KEGG:ath:AT1G22900","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN45861_c2_g4","roots S.abrotanoides","roots S. yangii",-3.00175614630516,"0.000127868977877581","0.000296398466142152","TRINITY_DN45861_c2_g4_i2","4CL1_TOBAC^4CL1_TOBAC^Q:1700-99,H:8-541^62.43%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45861_c2_g4_i2.p1","96-1703[-]","4CL1_TOBAC^4CL1_TOBAC^Q:2-535,H:8-541^62.43%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00501.25^AMP-binding^AMP-binding enzyme^35-441^E:1.3e-106`PF13193.3^AMP-binding_C^AMP-binding enzyme C-terminal domain^450-525^E:3.3e-16",".",".",".",".","GO:0016207^molecular_function^4-coumarate-CoA ligase activity`GO:0005524^molecular_function^ATP binding`GO:0009698^biological_process^phenylpropanoid metabolic process","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47018_c0_g1","roots S.abrotanoides","roots S. yangii",-3.05010694870316,0,0,"TRINITY_DN47018_c0_g1_i24","SABP2_TOBAC^SABP2_TOBAC^Q:107-880,H:2-259^68.22%ID^E:2e-125^RecName: Full=Salicylic acid-binding protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47018_c0_g1_i24.p1","95-886[+]","SABP2_TOBAC^SABP2_TOBAC^Q:5-262,H:2-259^68.22%ID^E:1e-126^RecName: Full=Salicylic acid-binding protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^9-130^E:2.5e-15`PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^9-111^E:2.2e-08`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^10-251^E:5.5e-21",".",".",".",".","GO:0016298^molecular_function^lipase activity`GO:0080031^molecular_function^methyl salicylate esterase activity`GO:0008152^biological_process^metabolic process`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway",".",".","."]
["TRINITY_DN46596_c0_g12","roots S.abrotanoides","roots S. yangii",-3.06314828121269,{"v":4717332779.50826,"d":"4.72E+09"},"0.00011569120968335","TRINITY_DN46596_c0_g12_i3","PP317_ARATH^PP317_ARATH^Q:849-2690,H:60-673^44.12%ID^E:7e-154^RecName: Full=Pentatricopeptide repeat-containing protein At4g17616;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46596_c0_g12_i3.p1","636-2696[+]","PP317_ARATH^PP317_ARATH^Q:72-685,H:60-673^44.12%ID^E:3e-174^RecName: Full=Pentatricopeptide repeat-containing protein At4g17616;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^460-489^E:0.066",".",".","ENOG410ZJZY^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G17616",".",".",".","."]
["TRINITY_DN47218_c1_g1","roots S.abrotanoides","roots S. yangii",-3.16539627684827,{"v":8116895308.38894,"d":"8.12E+09"},"0.000193114928313773","TRINITY_DN47218_c1_g1_i1","U76F1_ARATH^U76F1_ARATH^Q:137-1480,H:2-457^48.58%ID^E:4e-152^RecName: Full=UDP-glycosyltransferase 76F1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47218_c1_g1_i1.p1","122-1483[+]","U76F1_ARATH^U76F1_ARATH^Q:6-453,H:2-457^48.58%ID^E:1e-153^RecName: Full=UDP-glycosyltransferase 76F1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^100-409^E:1.1e-31",".",".","COG1819^Transferase","KEGG:ath:AT3G55700","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44333_c2_g12","roots S.abrotanoides","roots S. yangii",-3.1824156247652,0,0,"TRINITY_DN44333_c2_g12_i1","SCGT_TOBAC^SCGT_TOBAC^Q:215-1585,H:1-471^57.93%ID^E:0^RecName: Full=Scopoletin glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44333_c2_g12_i1.p1","215-1612[+]","SCGT_TOBAC^SCGT_TOBAC^Q:1-457,H:1-471^59.2%ID^E:0^RecName: Full=Scopoletin glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^254-381^E:1.6e-26",".",".",".",".","GO:0042802^molecular_function^identical protein binding`GO:0050275^molecular_function^scopoletin glucosyltransferase activity","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN32354_c0_g1","roots S.abrotanoides","roots S. yangii",-4.26100926044088,0,0,"TRINITY_DN32354_c0_g1_i2","PERN_ARMRU^PERN_ARMRU^Q:78-1055,H:2-324^61.35%ID^E:1e-143^RecName: Full=Peroxidase N;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Cardamineae; Armoracia",".","TRINITY_DN32354_c0_g1_i2.p1","3-1070[+]","PERN_ARMRU^PERN_ARMRU^Q:26-354,H:2-327^61.4%ID^E:2e-146^RecName: Full=Peroxidase N;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Cardamineae; Armoracia","PF00141.20^peroxidase^Peroxidase^70-317^E:5.1e-76",".",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]

{"sheet":"(B) leaves SA_roots SA_DEGs","index":1,"n_rows":838,"n_cols":21,"rows_kept":838}
["Table S3 (B). Differently expressed genes in the comparison between leaves and roots of S. abrotanoides "]
[]
["Row.names","sampleA","sampleB","log2FoldChange","pvalue","padj","transcript_id","sprot_Top_BLASTX_hit","RNAMMER","prot_id","prot_coords","sprot_Top_BLASTP_hit","Pfam","SignalP","TmHMM","eggnog","Kegg","gene_ontology_blast","gene_ontology_pfam","transcript","peptide"]
["TRINITY_DN45980_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",14.8718064945457,0,0,"TRINITY_DN45980_c4_g3_i11","BCA1_ARATH^BCA1_ARATH^Q:821-261,H:162-347^80.21%ID^E:1e-101^RecName: Full=Beta carbonic anhydrase 1, chloroplastic {ECO:0000303|PubMed:17407539};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BCA1_ARATH^BCA1_ARATH^Q:1156-800,H:60-178^57.14%ID^E:1e-30^RecName: Full=Beta carbonic anhydrase 1, chloroplastic {ECO:0000303|PubMed:17407539};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45980_c4_g3_i11.p2","255-818[-]","BCA1_ARATH^BCA1_ARATH^Q:1-186,H:163-347^80.11%ID^E:5e-106^RecName: Full=Beta carbonic anhydrase 1, chloroplastic {ECO:0000303|PubMed:17407539};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00484.16^Pro_CA^Carbonic anhydrase^1-159^E:2.6e-41",".",".","COG0288^carbonic anhydrase","KEGG:ath:AT3G01500`KO:K01673","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0010319^cellular_component^stromule`GO:0009579^cellular_component^thylakoid`GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015976^biological_process^carbon utilization`GO:0042742^biological_process^defense response to bacterium`GO:0009817^biological_process^defense response to fungus, incompatible interaction`GO:2000122^biological_process^negative regulation of stomatal complex development`GO:0015979^biological_process^photosynthesis`GO:0010119^biological_process^regulation of stomatal movement`GO:0010037^biological_process^response to carbon dioxide`GO:0009409^biological_process^response to cold","GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN43873_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",13.8846380699876,0,0,"TRINITY_DN43873_c3_g2_i1","CB4A_ARATH^CB4A_ARATH^Q:250-1068,H:14-287^85.4%ID^E:3e-162^RecName: Full=Chlorophyll a-b binding protein CP29.1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43873_c3_g2_i1.p1","232-1083[+]","CB4B_ARATH^CB4B_ARATH^Q:12-279,H:19-284^85.82%ID^E:4e-169^RecName: Full=Chlorophyll a-b binding protein CP29.2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^56-252^E:2.5e-49",".",".","ENOG410YYUX^Chlorophyll A-B binding protein","KEGG:ath:AT3G08940`KO:K08915","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0031409^molecular_function^pigment binding`GO:0009768^biological_process^photosynthesis, light harvesting in photosystem I`GO:0018298^biological_process^protein-chromophore linkage`GO:0009637^biological_process^response to blue light`GO:0009735^biological_process^response to cytokinin`GO:0010218^biological_process^response to far red light`GO:0010114^biological_process^response to red light",".",".","."]
["TRINITY_DN44264_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",13.7866908003203,0,0,"TRINITY_DN44264_c1_g3_i3","CB13_SOLLC^CB13_SOLLC^Q:1749-928,H:1-273^90.88%ID^E:1e-155^RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44264_c1_g3_i3.p1","925-1749[-]","CB13_SOLLC^CB13_SOLLC^Q:1-274,H:1-273^90.88%ID^E:6e-174^RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^65-244^E:2.6e-50",".",".","ENOG410ZM8E^Chlorophyll a-b binding protein",".","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0010287^cellular_component^plastoglobule`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0031409^molecular_function^pigment binding`GO:0009768^biological_process^photosynthesis, light harvesting in photosystem I`GO:0018298^biological_process^protein-chromophore linkage`GO:0009416^biological_process^response to light stimulus",".",".","."]
["TRINITY_DN46421_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",13.322635879194,0,0,"TRINITY_DN46421_c3_g1_i14","RCA2_LARTR^RCA2_LARTR^Q:204-554,H:1-120^67.77%ID^E:2e-43^RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Zygophyllales; Zygophyllaceae; Larreoideae; Larrea`RCA2_LARTR^RCA2_LARTR^Q:729-884,H:102-157^58.93%ID^E:2e-13^RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Zygophyllales; Zygophyllaceae; Larreoideae; Larrea`RCA2_LARTR^RCA2_LARTR^Q:1006-1104,H:155-187^84.85%ID^E:8e-10^RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Zygophyllales; Zygophyllaceae; Larreoideae; Larrea",".","TRINITY_DN46421_c3_g1_i14.p1","204-560[+]","RCA2_LARTR^RCA2_LARTR^Q:1-117,H:1-120^67.77%ID^E:8e-48^RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Zygophyllales; Zygophyllaceae; Larreoideae; Larrea",".",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN46333_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",13.3058313160711,0,0,"TRINITY_DN46333_c4_g2_i6","LOX21_SOLTU^LOX21_SOLTU^Q:281-1348,H:28-389^57.77%ID^E:6e-179^RecName: Full=Linoleate 13S-lipoxygenase 2-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`LOX21_SOLTU^LOX21_SOLTU^Q:1452-2042,H:392-566^61.11%ID^E:6e-179^RecName: Full=Linoleate 13S-lipoxygenase 2-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46333_c4_g2_i6.p1","185-1360[+]","LOX21_SOLTU^LOX21_SOLTU^Q:33-388,H:28-389^57.77%ID^E:2e-141^RecName: Full=Linoleate 13S-lipoxygenase 2-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01477.20^PLAT^PLAT/LH2 domain^135-200^E:1.8e-09`PF00305.16^Lipoxygenase^Lipoxygenase^213-389^E:3.7e-58",".",".","ENOG410YN4N^Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)","KEGG:sot:102596122`KO:K00454","GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0016165^molecular_function^linoleate 13S-lipoxygenase activity`GO:0046872^molecular_function^metal ion binding`GO:0031408^biological_process^oxylipin biosynthetic process","GO:0005515^molecular_function^protein binding`GO:0016702^molecular_function^oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45167_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",13.0368354457879,0,0,"TRINITY_DN45167_c1_g1_i1","KPPR_WHEAT^KPPR_WHEAT^Q:721-230,H:240-403^92.07%ID^E:5e-106^RecName: Full=Phosphoribulokinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum`KPPR_WHEAT^KPPR_WHEAT^Q:918-817,H:206-239^85.29%ID^E:3e-09^RecName: Full=Phosphoribulokinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".","TRINITY_DN45167_c1_g1_i1.p1","224-757[-]","KPPR_WHEAT^KPPR_WHEAT^Q:13-176,H:240-403^92.07%ID^E:3e-109^RecName: Full=Phosphoribulokinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0008974^molecular_function^phosphoribulokinase activity`GO:0019253^biological_process^reductive pentose-phosphate cycle",".",".","."]
["TRINITY_DN45033_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",12.949715974325,0,0,"TRINITY_DN45033_c4_g1_i1","FER_CAPAN^FER_CAPAN^Q:911-510,H:14-142^70.15%ID^E:5e-41^RecName: Full=Ferredoxin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum",".","TRINITY_DN45033_c4_g1_i1.p1","504-950[-]","FER_CAPAN^FER_CAPAN^Q:1-147,H:1-142^68.03%ID^E:5e-68^RecName: Full=Ferredoxin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum","PF00111.24^Fer2^2Fe-2S iron-sulfur cluster binding domain^62-134^E:7.3e-19",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0046872^molecular_function^metal ion binding`GO:0022900^biological_process^electron transport chain","GO:0009055^molecular_function^electron carrier activity`GO:0051536^molecular_function^iron-sulfur cluster binding",".","."]
["TRINITY_DN36933_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",12.2253137372148,0,0,"TRINITY_DN36933_c0_g1_i3","PSBQ2_ARATH^PSBQ2_ARATH^Q:180-839,H:10-230^71.17%ID^E:4e-93^RecName: Full=Oxygen-evolving enhancer protein 3-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36933_c0_g1_i3.p1","153-842[+]","PSBQ2_ARATH^PSBQ2_ARATH^Q:1-229,H:1-230^71.43%ID^E:8e-113^RecName: Full=Oxygen-evolving enhancer protein 3-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05757.8^PsbQ^Oxygen evolving enhancer protein 3 (PsbQ)^32-229^E:1.1e-83",".",".","ENOG4111SJA^oxygen-evolving enhancer protein","KEGG:ath:AT4G05180`KO:K08901","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0019898^cellular_component^extrinsic component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN43855_c8_g3","leaves S. abrotanoides","roots S. abrotanoides",12.0914008847582,0,0,"TRINITY_DN43855_c8_g3_i3","G3PA_TOBAC^G3PA_TOBAC^Q:293-724,H:2-144^86.9%ID^E:2e-104^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`G3PA_TOBAC^G3PA_TOBAC^Q:787-1038,H:143-226^88.1%ID^E:2e-104^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`G3PA_TOBAC^G3PA_TOBAC^Q:1278-1769,H:229-392^89.02%ID^E:3e-56^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43855_c8_g3_i3.p3","1287-1772[+]","G3PA_PEA^G3PA_PEA^Q:1-161,H:245-405^95.65%ID^E:5e-107^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF02800.17^Gp_dh_C^Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain^1-139^E:2.4e-59",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0047100^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity`GO:0051287^molecular_function^NAD binding`GO:0050661^molecular_function^NADP binding`GO:0006006^biological_process^glucose metabolic process`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0016620^molecular_function^oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN91123_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",11.983956968312,0,0,"TRINITY_DN91123_c0_g1_i1","PST2_PETHY^PST2_PETHY^Q:240-515,H:10-105^57.29%ID^E:5e-13^RecName: Full=Photosystem II 5 kDa protein, chloroplastic {ECO:0000303|PubMed:22700981};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN91123_c0_g1_i1.p1","213-521[+]","PST2_PETHY^PST2_PETHY^Q:1-101,H:1-105^56.19%ID^E:3e-26^RecName: Full=Photosystem II 5 kDa protein, chloroplastic {ECO:0000303|PubMed:22700981};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009523^cellular_component^photosystem II`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN46749_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",11.9607134102493,0,0,"TRINITY_DN46749_c2_g1_i7","PSBS_SOLSG^PSBS_SOLSG^Q:211-765,H:1-195^70.35%ID^E:1e-45^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`PSBS_SOLSG^PSBS_SOLSG^Q:1345-1587,H:196-276^91.36%ID^E:6e-28^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`PSBS_SOLSG^PSBS_SOLSG^Q:1357-1575,H:94-168^62.67%ID^E:9e-13^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`PSBS_SOLSG^PSBS_SOLSG^Q:472-609,H:203-248^67.39%ID^E:9e-10^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46749_c2_g1_i7.p1","211-912[+]","PSBS_SOLSG^PSBS_SOLSG^Q:1-185,H:1-195^70.35%ID^E:2e-64^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`PSBS_SOLSG^PSBS_SOLSG^Q:85-133,H:200-248^69.39%ID^E:1e-13^RecName: Full=Photosystem II 22 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^83-183^E:5.5e-05",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN43976_c4_g6","leaves S. abrotanoides","roots S. abrotanoides",11.7939803426843,0,0,"TRINITY_DN43976_c4_g6_i1","CP122_ARATH^CP122_ARATH^Q:894-523,H:1-131^56.82%ID^E:3e-34^RecName: Full=Calvin cycle protein CP12-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43976_c4_g6_i1.p1","520-894[-]","CP122_ARATH^CP122_ARATH^Q:1-124,H:1-131^56.82%ID^E:2e-37^RecName: Full=Calvin cycle protein CP12-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02672.12^CP12^CP12 domain^56-123^E:3.6e-28",".",".","ENOG4112442^Calvin cycle protein","KEGG:ath:AT3G62410","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0043234^cellular_component^protein complex`GO:0005507^molecular_function^copper ion binding`GO:0016151^molecular_function^nickel cation binding`GO:0071454^biological_process^cellular response to anoxia`GO:0070417^biological_process^cellular response to cold`GO:0034605^biological_process^cellular response to heat`GO:0080153^biological_process^negative regulation of reductive pentose-phosphate cycle`GO:0018316^biological_process^peptide cross-linking via L-cystine`GO:0019253^biological_process^reductive pentose-phosphate cycle`GO:0009416^biological_process^response to light stimulus`GO:0009744^biological_process^response to sucrose",".",".","."]
["TRINITY_DN46336_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",11.2921358808091,0,0,"TRINITY_DN46336_c4_g1_i1","FENR1_PEA^FENR1_PEA^Q:1101-7,H:1-360^81.64%ID^E:0^RecName: Full=Ferredoxin--NADP reductase, leaf isozyme, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN46336_c4_g1_i1.p1","4-1101[-]","FENR1_PEA^FENR1_PEA^Q:1-365,H:1-360^81.64%ID^E:0^RecName: Full=Ferredoxin--NADP reductase, leaf isozyme, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00175.18^NAD_binding_1^Oxidoreductase NAD-binding domain^218-333^E:7.5e-30",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0004324^molecular_function^ferredoxin-NADP+ reductase activity`GO:0015979^biological_process^photosynthesis","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45977_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",11.2626188140778,0,0,"TRINITY_DN45977_c0_g1_i1","NLTP2_SOLPN^NLTP2_SOLPN^Q:626-291,H:1-112^57.14%ID^E:2e-37^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45977_c0_g1_i1.p2","288-638[-]","NLTP2_SOLPN^NLTP2_SOLPN^Q:5-116,H:1-112^57.14%ID^E:3e-39^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF14368.3^LTP_2^Probable lipid transfer^11-106^E:5e-06`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^31-114^E:1.9e-08","sigP:1^27^0.864^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN46848_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",11.2116449204792,0,0,"TRINITY_DN46848_c0_g3_i1","CB26_PETSP^CB26_PETSP^Q:813-166,H:50-265^96.76%ID^E:7e-151^RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia`CB26_PETSP^CB26_PETSP^Q:1054-908,H:1-49^87.76%ID^E:3e-18^RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN46848_c0_g3_i1.p1","163-645[-]","CB26_PETSP^CB26_PETSP^Q:1-160,H:106-265^96.88%ID^E:4e-109^RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^1-126^E:5e-30",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0009765^biological_process^photosynthesis, light harvesting`GO:0018298^biological_process^protein-chromophore linkage",".",".","."]
["TRINITY_DN44675_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",11.1363891284459,0,0,"TRINITY_DN44675_c1_g2_i6","MTND1_VITVI^MTND1_VITVI^Q:1550-1113,H:1-147^80.27%ID^E:4e-78^RecName: Full=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 {ECO:0000255|HAMAP-Rule:MF_03154};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis`MTND1_VITVI^MTND1_VITVI^Q:412-296,H:147-188^66.67%ID^E:9e-10^RecName: Full=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 {ECO:0000255|HAMAP-Rule:MF_03154};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN44675_c1_g2_i6.p1","1089-1550[-]","MTND1_VITVI^MTND1_VITVI^Q:1-146,H:1-147^80.27%ID^E:8e-84^RecName: Full=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 {ECO:0000255|HAMAP-Rule:MF_03154};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF03079.11^ARD^ARD/ARD' family^5-146^E:1.2e-51`PF02311.16^AraC_binding^AraC-like ligand binding domain^85-141^E:7.5e-08`PF07883.8^Cupin_2^Cupin domain^88-141^E:2.4e-09",".",".","COG1791^Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway (By similarity)",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0010309^molecular_function^acireductone dioxygenase [iron(II)-requiring] activity`GO:0046872^molecular_function^metal ion binding`GO:0019509^biological_process^L-methionine biosynthetic process from methylthioadenosine`GO:0006555^biological_process^methionine metabolic process","GO:0010309^molecular_function^acireductone dioxygenase [iron(II)-requiring] activity`GO:0055114^biological_process^oxidation-reduction process`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43490_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",10.8222836443234,0,0,"TRINITY_DN43490_c2_g1_i1","PSBY_ARATH^PSBY_ARATH^Q:540-217,H:80-187^67.59%ID^E:5e-19^RecName: Full=Photosystem II core complex proteins psbY, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43490_c2_g1_i1.p1","211-774[-]","PSBY_SPIOL^PSBY_SPIOL^Q:11-187,H:11-199^56.41%ID^E:2e-57^RecName: Full=Photosystem II core complex proteins psbY, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF06298.8^PsbY^Photosystem II protein Y (PsbY)^80-112^E:1.7e-14`PF06298.8^PsbY^Photosystem II protein Y (PsbY)^152-184^E:6.4e-11",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0030145^molecular_function^manganese ion binding`GO:0015979^biological_process^photosynthesis","GO:0030145^molecular_function^manganese ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46280_c4_g4","leaves S. abrotanoides","roots S. abrotanoides",10.6290895255866,0,0,"TRINITY_DN46280_c4_g4_i1","PSAL_SPIOL^PSAL_SPIOL^Q:129-755,H:11-216^83.25%ID^E:3e-97^RecName: Full=Photosystem I reaction center subunit XI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN46280_c4_g4_i1.p1","99-758[+]","PSAL_SPIOL^PSAL_SPIOL^Q:1-219,H:1-216^82.65%ID^E:1e-108^RecName: Full=Photosystem I reaction center subunit XI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF02605.12^PsaL^Photosystem I reaction centre subunit XI^61-213^E:1.2e-58",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN44683_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",10.5563581600026,0,0,"TRINITY_DN44683_c1_g2_i7","G3PB_PEA^G3PB_PEA^Q:524-1405,H:11-272^76.19%ID^E:2e-154^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`G3PB_PEA^G3PB_PEA^Q:1549-1899,H:291-407^93.16%ID^E:2e-57^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44683_c1_g2_i7.p1","494-1282[+]","G3PB_PEA^G3PB_PEA^Q:1-256,H:1-256^84.38%ID^E:1e-159^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00044.21^Gp_dh_N^Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain^87-239^E:5.9e-53",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0047100^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity`GO:0051287^molecular_function^NAD binding`GO:0050661^molecular_function^NADP binding`GO:0006006^biological_process^glucose metabolic process`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0016620^molecular_function^oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46835_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",10.399989319178,0,0,"TRINITY_DN46835_c1_g2_i11","GLYM_SOLTU^GLYM_SOLTU^Q:2311-911,H:1-450^84.6%ID^E:0^RecName: Full=Serine hydroxymethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`GLYM_SOLTU^GLYM_SOLTU^Q:857-600,H:432-518^82.76%ID^E:2e-36^RecName: Full=Serine hydroxymethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46835_c1_g2_i11.p1","1109-2509[-]","GLYM_SOLTU^GLYM_SOLTU^Q:67-460,H:1-397^90.93%ID^E:0^RecName: Full=Serine hydroxymethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00464.16^SHMT^Serine hydroxymethyltransferase^120-459^E:2.1e-182",".",".","COG0112^Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)","KEGG:sot:102591486`KO:K00600","GO:0048046^cellular_component^apoplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0022626^cellular_component^cytosolic ribosome`GO:0005759^cellular_component^mitochondrial matrix`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0010319^cellular_component^stromule`GO:0004372^molecular_function^glycine hydroxymethyltransferase activity`GO:0008266^molecular_function^poly(U) RNA binding`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0042742^biological_process^defense response to bacterium`GO:0009814^biological_process^defense response, incompatible interaction`GO:0006544^biological_process^glycine metabolic process`GO:0006563^biological_process^L-serine metabolic process`GO:0009853^biological_process^photorespiration`GO:0019684^biological_process^photosynthesis, light reaction`GO:0009626^biological_process^plant-type hypersensitive response`GO:0009697^biological_process^salicylic acid biosynthetic process`GO:0035999^biological_process^tetrahydrofolate interconversion","GO:0016740^molecular_function^transferase activity",".","."]
["TRINITY_DN46848_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",10.3747266891877,0,0,"TRINITY_DN46848_c0_g1_i4","CB21_TOBAC^CB21_TOBAC^Q:1005-250,H:14-266^91.7%ID^E:7e-168^RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46848_c0_g1_i4.p1","247-1047[-]","CB24_TOBAC^CB24_TOBAC^Q:1-266,H:1-267^91.39%ID^E:0^RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^66-232^E:2.8e-50",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0009765^biological_process^photosynthesis, light harvesting`GO:0018298^biological_process^protein-chromophore linkage",".",".","."]
["TRINITY_DN46336_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",10.0273586200604,0,0,"TRINITY_DN46336_c4_g2_i4","FENR_SPIOL^FENR_SPIOL^Q:1223-408,H:11-250^67.03%ID^E:9e-145^RecName: Full=Ferredoxin--NADP reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia`FENR_SPIOL^FENR_SPIOL^Q:300-1,H:246-345^91%ID^E:9e-145^RecName: Full=Ferredoxin--NADP reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN46336_c4_g2_i4.p1","567-1253[-]","FENR1_TOBAC^FENR1_TOBAC^Q:1-218,H:1-217^84.4%ID^E:1e-126^RecName: Full=Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00970.21^FAD_binding_6^Oxidoreductase FAD-binding domain^138-202^E:8.1e-05",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0004324^molecular_function^ferredoxin-NADP+ reductase activity`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN46297_c2_g7","leaves S. abrotanoides","roots S. abrotanoides",9.98936055508382,0,0,"TRINITY_DN46297_c2_g7_i2","CP41B_ARATH^CP41B_ARATH^Q:1316-183,H:1-378^84.13%ID^E:0^RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46297_c2_g7_i2.p1","177-1316[-]","CP41B_ARATH^CP41B_ARATH^Q:1-378,H:1-378^84.13%ID^E:0^RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^56-273^E:4.1e-13`PF13460.3^NAD_binding_10^NAD(P)H-binding^60-212^E:1.2e-07",".",".","ENOG410XQQI^Nad-dependent epimerase dehydratase","KEGG:ath:AT1G09340","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005777^cellular_component^peroxisome`GO:0009506^cellular_component^plasmodesma`GO:0010287^cellular_component^plastoglobule`GO:0005840^cellular_component^ribosome`GO:0010319^cellular_component^stromule`GO:0005773^cellular_component^vacuole`GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0010297^molecular_function^heteropolysaccharide binding`GO:0003723^molecular_function^RNA binding`GO:0019843^molecular_function^rRNA binding`GO:0042631^biological_process^cellular response to water deprivation`GO:0009658^biological_process^chloroplast organization`GO:0007623^biological_process^circadian rhythm`GO:0042742^biological_process^defense response to bacterium`GO:0005996^biological_process^monosaccharide metabolic process`GO:0032544^biological_process^plastid translation`GO:0000272^biological_process^polysaccharide catabolic process`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0045727^biological_process^positive regulation of translation`GO:0009409^biological_process^response to cold`GO:0009611^biological_process^response to wounding`GO:0006364^biological_process^rRNA processing","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding",".","."]
["TRINITY_DN44362_c5_g2","leaves S. abrotanoides","roots S. abrotanoides",9.93154575886738,0,0,"TRINITY_DN44362_c5_g2_i13","FRO7_ARATH^FRO7_ARATH^Q:268-1782,H:32-548^61.51%ID^E:0^RecName: Full=Ferric reduction oxidase 7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FRO7_ARATH^FRO7_ARATH^Q:1964-2581,H:530-747^48.17%ID^E:2e-47^RecName: Full=Ferric reduction oxidase 7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44362_c5_g2_i13.p1","184-1854[+]","FRO7_ARATH^FRO7_ARATH^Q:29-533,H:32-548^61.51%ID^E:0^RecName: Full=Ferric reduction oxidase 7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01794.16^Ferric_reduct^Ferric reductase like transmembrane component^184-304^E:1.6e-18`PF08022.9^FAD_binding_8^FAD-binding domain^339-436^E:3.7e-18`PF08030.9^NAD_binding_6^Ferric reductase NAD binding domain^443-524^E:6.8e-11",".",".","ENOG410XNZY^NADPH Oxidase","KEGG:ath:AT5G49740","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0000293^molecular_function^ferric-chelate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0006811^biological_process^ion transport`GO:0009767^biological_process^photosynthetic electron transport chain","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45393_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",9.69130940897855,0,0,"TRINITY_DN45393_c0_g2_i4","PSAN_ARATH^PSAN_ARATH^Q:1716-1246,H:1-171^66.08%ID^E:3e-67^RecName: Full=Photosystem I reaction center subunit N, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45393_c0_g2_i4.p3","1243-1716[-]","PSAN_ARATH^PSAN_ARATH^Q:1-157,H:1-171^66.08%ID^E:2e-73^RecName: Full=Photosystem I reaction center subunit N, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05479.8^PsaN^Photosystem I reaction centre subunit N (PSAN or PSI-N)^44-157^E:1.7e-64",".",".","ENOG411281Y^Photosystem I reaction center subunit",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009522^cellular_component^photosystem I`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I",".","."]
["TRINITY_DN44219_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",9.64091265140785,0,0,"TRINITY_DN44219_c0_g3_i1","SGAT_ARATH^SGAT_ARATH^Q:1508-306,H:1-401^85.79%ID^E:0^RecName: Full=Serine--glyoxylate aminotransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44219_c0_g3_i1.p1","303-1508[-]","SGAT_ARATH^SGAT_ARATH^Q:1-401,H:1-401^85.79%ID^E:0^RecName: Full=Serine--glyoxylate aminotransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00266.16^Aminotran_5^Aminotransferase class-V^12-322^E:4.1e-32",".",".","COG0075^aminotransferase","KEGG:ath:AT2G13360`KO:K00830","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005777^cellular_component^peroxisome`GO:0005886^cellular_component^plasma membrane`GO:0008453^molecular_function^alanine-glyoxylate transaminase activity`GO:0050281^molecular_function^serine-glyoxylate transaminase activity`GO:0004760^molecular_function^serine-pyruvate transaminase activity`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN45660_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",9.62664027976258,0,0,"TRINITY_DN45660_c3_g1_i1","PSAD_NICSY^PSAD_NICSY^Q:2277-1648,H:1-203^81.6%ID^E:2e-98^RecName: Full=Photosystem I reaction center subunit II, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45660_c3_g1_i1.p1","1642-2277[-]","PSAD_SOLLC^PSAD_SOLLC^Q:1-211,H:1-208^81.78%ID^E:1e-111^RecName: Full=Photosystem I reaction center subunit II, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF02531.13^PsaD^PsaD^79-209^E:1.6e-68",".",".","ENOG4111HAV^photosystem i","KEGG:sly:543978`KO:K02692","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN47208_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",9.60289284426393,0,0,"TRINITY_DN47208_c0_g1_i1","PSBO_SOLLC^PSBO_SOLLC^Q:926-195,H:86-329^91.8%ID^E:4e-158^RecName: Full=Oxygen-evolving enhancer protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN47208_c0_g1_i1.p1","189-701[-]","PSBO_SOLLC^PSBO_SOLLC^Q:1-169,H:161-329^92.31%ID^E:4e-109^RecName: Full=Oxygen-evolving enhancer protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF01716.15^MSP^Manganese-stabilising protein / photosystem II polypeptide^1-168^E:2.2e-76",".",".","ENOG410XP4G^photosystem II manganese-stabilizing","KEGG:sly:544299`KO:K02716","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0019898^cellular_component^extrinsic component of membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0042549^biological_process^photosystem II stabilization","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0042549^biological_process^photosystem II stabilization`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN46423_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",9.60194125528589,0,0,"TRINITY_DN46423_c1_g1_i2","CLH1_ARATH^CLH1_ARATH^Q:1300-401,H:42-321^43.79%ID^E:9e-63^RecName: Full=Chlorophyllase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46423_c1_g1_i2.p1","407-1438[-]","CLH1_ARATH^CLH1_ARATH^Q:22-343,H:19-318^42.07%ID^E:6e-65^RecName: Full=Chlorophyllase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07224.8^Chlorophyllase^Chlorophyllase^15-337^E:9.5e-89`PF12740.4^Chlorophyllase2^Chlorophyllase enzyme^46-321^E:2.1e-87`PF01738.15^DLH^Dienelactone hydrolase family^49-160^E:7.3e-05`PF03403.10^PAF-AH_p_II^Platelet-activating factor acetylhydrolase, isoform II^56-94^E:2.1e-06",".",".","ENOG410XWBW^chlorophyllase (EC 3.1.1.14)","KEGG:ath:AT1G19670`KO:K08099","GO:0005773^cellular_component^vacuole`GO:0047746^molecular_function^chlorophyllase activity`GO:0015996^biological_process^chlorophyll catabolic process`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus","GO:0047746^molecular_function^chlorophyllase activity`GO:0015996^biological_process^chlorophyll catabolic process`GO:0016787^molecular_function^hydrolase activity`GO:0003847^molecular_function^1-alkyl-2-acetylglycerophosphocholine esterase activity`GO:0016042^biological_process^lipid catabolic process",".","."]
["TRINITY_DN47206_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",9.40833978735572,0,0,"TRINITY_DN47206_c3_g1_i1","CB5_ARATH^CB5_ARATH^Q:2456-1620,H:2-280^84.64%ID^E:7e-133^RecName: Full=Chlorophyll a-b binding protein CP26, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47206_c3_g1_i1.p1","1617-2471[-]","CB5_ARATH^CB5_ARATH^Q:6-284,H:2-280^83.93%ID^E:6e-151^RecName: Full=Chlorophyll a-b binding protein CP26, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^86-247^E:9.3e-46",".",".","ENOG41110WY^Chlorophyll A-B binding protein","KEGG:ath:AT4G10340`KO:K08916","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009522^cellular_component^photosystem I`GO:0009783^cellular_component^photosystem II antenna complex`GO:0010287^cellular_component^plastoglobule`GO:0009517^cellular_component^PSII associated light-harvesting complex II`GO:0009579^cellular_component^thylakoid`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0031409^molecular_function^pigment binding`GO:0010196^biological_process^nonphotochemical quenching`GO:0015979^biological_process^photosynthesis`GO:0009768^biological_process^photosynthesis, light harvesting in photosystem I`GO:0018298^biological_process^protein-chromophore linkage`GO:0009637^biological_process^response to blue light`GO:0010218^biological_process^response to far red light`GO:0010114^biological_process^response to red light",".",".","."]
["TRINITY_DN44619_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",9.13595928494315,0,0,"TRINITY_DN44619_c4_g1_i3","GLGS_BRANA^GLGS_BRANA^Q:1009-275,H:276-520^91.43%ID^E:0^RecName: Full=Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica`GLGS_BRANA^GLGS_BRANA^Q:1784-1107,H:57-279^89.82%ID^E:0^RecName: Full=Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN44619_c4_g1_i3.p1","978-1928[-]","GLGS_BRANA^GLGS_BRANA^Q:49-274,H:57-279^89.82%ID^E:1e-136^RecName: Full=Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica","PF00483.20^NTP_transferase^Nucleotidyl transferase^87-275^E:6e-54`PF12804.4^NTP_transf_3^MobA-like NTP transferase domain^87-234^E:2e-06",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0008878^molecular_function^glucose-1-phosphate adenylyltransferase activity`GO:0005978^biological_process^glycogen biosynthetic process`GO:0019252^biological_process^starch biosynthetic process","GO:0016779^molecular_function^nucleotidyltransferase activity`GO:0009058^biological_process^biosynthetic process",".","."]
["TRINITY_DN42771_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",9.13231389475415,0,0,"TRINITY_DN42771_c0_g1_i2","CAHC_TOBAC^CAHC_TOBAC^Q:1458-595,H:2-267^58.9%ID^E:6e-107^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`CAHC_TOBAC^CAHC_TOBAC^Q:538-353,H:249-313^60%ID^E:6e-16^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN42771_c0_g1_i2.p1","754-1470[-]","CAHC_TOBAC^CAHC_TOBAC^Q:7-235,H:4-232^63.52%ID^E:3e-96^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00484.16^Pro_CA^Carbonic anhydrase^150-226^E:6.4e-28",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015976^biological_process^carbon utilization","GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN46193_c5_g2","leaves S. abrotanoides","roots S. abrotanoides",9.07158129821379,0,0,"TRINITY_DN46193_c5_g2_i2","Y4141_ARATH^Y4141_ARATH^Q:131-529,H:24-155^67.67%ID^E:5e-57^RecName: Full=Uncharacterized protein At4g14100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46193_c5_g2_i2.p1","2-535[+]","Y4141_ARATH^Y4141_ARATH^Q:27-176,H:6-155^61.59%ID^E:2e-61^RecName: Full=Uncharacterized protein At4g14100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^44^0.58^YES",".","ENOG4111MP0^NA","KEGG:ath:AT4G14100","GO:0005773^cellular_component^vacuole",".",".","."]
["TRINITY_DN46113_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",9.0067615192504,0,0,"TRINITY_DN46113_c2_g1_i3","CCD4_ARATH^CCD4_ARATH^Q:2259-1066,H:80-481^71.64%ID^E:0^RecName: Full=Probable carotenoid cleavage dioxygenase 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46113_c2_g1_i3.p1","1012-2508[-]","CCD4_ARATH^CCD4_ARATH^Q:84-481,H:80-481^71.64%ID^E:0^RecName: Full=Probable carotenoid cleavage dioxygenase 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03055.12^RPE65^Retinal pigment epithelial membrane protein^121-485^E:3.8e-66",".",".","COG3670^dioxygenase","KEGG:ath:AT4G19170`KO:K09840","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0051213^molecular_function^dioxygenase activity`GO:0046872^molecular_function^metal ion binding","GO:0016702^molecular_function^oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN30706_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",8.87811093133212,0,0,"TRINITY_DN30706_c0_g1_i1","CHLP_TOBAC^CHLP_TOBAC^Q:198-1580,H:1-464^89.22%ID^E:0^RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN30706_c0_g1_i1.p1","198-1583[+]","CHLP_TOBAC^CHLP_TOBAC^Q:1-461,H:1-464^89.22%ID^E:0^RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01494.16^FAD_binding_3^FAD binding domain^51-83^E:3.3e-05`PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^51-220^E:4.2e-06`PF01134.19^GIDA^Glucose inhibited division protein A^52-86^E:4.8e-05",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0071949^molecular_function^FAD binding`GO:0045550^molecular_function^geranylgeranyl reductase activity`GO:0016628^molecular_function^oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0033385^biological_process^geranylgeranyl diphosphate metabolic process`GO:0015979^biological_process^photosynthesis`GO:0033521^biological_process^phytyl diphosphate biosynthetic process`GO:0010189^biological_process^vitamin E biosynthetic process","GO:0071949^molecular_function^FAD binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0008033^biological_process^tRNA processing",".","."]
["TRINITY_DN47370_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",8.87590765210416,0,0,"TRINITY_DN47370_c2_g2_i8","UCRIA_ORYSJ^UCRIA_ORYSJ^Q:76-744,H:2-224^70.4%ID^E:1e-97^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47370_c2_g2_i8.p1","70-750[+]","UCRIA_ORYSJ^UCRIA_ORYSJ^Q:3-226,H:2-225^70.13%ID^E:2e-113^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08802.7^CytB6-F_Fe-S^Cytochrome B6-F complex Fe-S subunit^55-93^E:1e-19`PF00355.23^Rieske^Rieske [2Fe-2S] domain^134-195^E:2.5e-12",".",".","COG0723^Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)","KEGG:osa:4343570`KO:K02636","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009512^cellular_component^cytochrome b6f complex`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0046028^molecular_function^electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity`GO:0045158^molecular_function^electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity`GO:0046872^molecular_function^metal ion binding`GO:0009496^molecular_function^plastoquinol--plastocyanin reductase activity`GO:0008121^molecular_function^ubiquinol-cytochrome-c reductase activity`GO:0050832^biological_process^defense response to fungus`GO:0009595^biological_process^detection of biotic stimulus`GO:0009867^biological_process^jasmonic acid mediated signaling pathway`GO:0000165^biological_process^MAPK cascade`GO:0031348^biological_process^negative regulation of defense response`GO:0010196^biological_process^nonphotochemical quenching`GO:0006098^biological_process^pentose-phosphate shunt`GO:0009767^biological_process^photosynthetic electron transport chain`GO:0010207^biological_process^photosystem II assembly`GO:0009657^biological_process^plastid organization`GO:0006612^biological_process^protein targeting to membrane`GO:0010310^biological_process^regulation of hydrogen peroxide metabolic process`GO:0043900^biological_process^regulation of multi-organism process`GO:0010363^biological_process^regulation of plant-type hypersensitive response`GO:0010200^biological_process^response to chitin`GO:0009409^biological_process^response to cold`GO:0006364^biological_process^rRNA processing`GO:0009697^biological_process^salicylic acid biosynthetic process`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway","GO:0009496^molecular_function^plastoquinol--plastocyanin reductase activity`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0055114^biological_process^oxidation-reduction process`GO:0042651^cellular_component^thylakoid membrane`GO:0016491^molecular_function^oxidoreductase activity",".","."]
["TRINITY_DN46813_c2_g5","leaves S. abrotanoides","roots S. abrotanoides",8.869916151902,"0.000255407050738039","0.000397375640361348","TRINITY_DN46813_c2_g5_i2","RHD32_ARATH^RHD32_ARATH^Q:3-359,H:154-281^57.03%ID^E:1e-34^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 homolog 2 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46813_c2_g5_i2.p1","3-359[+]","RHD32_ARATH^RHD32_ARATH^Q:1-119,H:154-281^57.03%ID^E:1e-34^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 homolog 2 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05879.9^RHD3^Root hair defective 3 GTP-binding protein (RHD3)^1-119^E:7e-36",".",".","ENOG410XPVJ^GTPase activity","KEGG:ath:AT5G45160","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity",".",".","."]
["TRINITY_DN47370_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",8.54868882741746,0,0,"TRINITY_DN47370_c2_g1_i14","UCRIA_ORYSJ^UCRIA_ORYSJ^Q:1724-1290,H:48-192^83.45%ID^E:2e-75^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47370_c2_g1_i14.p1","1230-1802[-]","UCRIA_ORYSJ^UCRIA_ORYSJ^Q:27-171,H:48-192^83.45%ID^E:7e-86^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08802.7^CytB6-F_Fe-S^Cytochrome B6-F complex Fe-S subunit^33-71^E:7.7e-20`PF00355.23^Rieske^Rieske [2Fe-2S] domain^111-170^E:3.6e-12",".",".","COG0723^Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)","KEGG:osa:4343570`KO:K02636","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009512^cellular_component^cytochrome b6f complex`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0046028^molecular_function^electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity`GO:0045158^molecular_function^electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity`GO:0046872^molecular_function^metal ion binding`GO:0009496^molecular_function^plastoquinol--plastocyanin reductase activity`GO:0008121^molecular_function^ubiquinol-cytochrome-c reductase activity`GO:0050832^biological_process^defense response to fungus`GO:0009595^biological_process^detection of biotic stimulus`GO:0009867^biological_process^jasmonic acid mediated signaling pathway`GO:0000165^biological_process^MAPK cascade`GO:0031348^biological_process^negative regulation of defense response`GO:0010196^biological_process^nonphotochemical quenching`GO:0006098^biological_process^pentose-phosphate shunt`GO:0009767^biological_process^photosynthetic electron transport chain`GO:0010207^biological_process^photosystem II assembly`GO:0009657^biological_process^plastid organization`GO:0006612^biological_process^protein targeting to membrane`GO:0010310^biological_process^regulation of hydrogen peroxide metabolic process`GO:0043900^biological_process^regulation of multi-organism process`GO:0010363^biological_process^regulation of plant-type hypersensitive response`GO:0010200^biological_process^response to chitin`GO:0009409^biological_process^response to cold`GO:0006364^biological_process^rRNA processing`GO:0009697^biological_process^salicylic acid biosynthetic process`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway","GO:0009496^molecular_function^plastoquinol--plastocyanin reductase activity`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0055114^biological_process^oxidation-reduction process`GO:0042651^cellular_component^thylakoid membrane`GO:0016491^molecular_function^oxidoreductase activity",".","."]
["TRINITY_DN44092_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",8.45671240975112,0,0,"TRINITY_DN44092_c2_g3_i5","THIC_ARATH^THIC_ARATH^Q:2995-1076,H:3-641^85.54%ID^E:0^RecName: Full=Phosphomethylpyrimidine synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44092_c2_g3_i5.p1","1064-2998[-]","THIC_ARATH^THIC_ARATH^Q:2-641,H:3-641^85.54%ID^E:0^RecName: Full=Phosphomethylpyrimidine synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01964.15^ThiC_Rad_SAM^Radical SAM ThiC family^164-584^E:6.3e-197",".",".","COG0422^thiamine diphosphate biosynthetic process","KEGG:ath:AT2G29630`KO:K03147","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0080041^molecular_function^ADP-ribose pyrophosphohydrolase activity`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0016829^molecular_function^lyase activity`GO:0046872^molecular_function^metal ion binding`GO:0010266^biological_process^response to vitamin B1`GO:0009228^biological_process^thiamine biosynthetic process`GO:0009229^biological_process^thiamine diphosphate biosynthetic process","GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0009228^biological_process^thiamine biosynthetic process",".","."]
["TRINITY_DN46608_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",8.42227482508089,0,0,"TRINITY_DN46608_c2_g1_i6","AMYB_VIGUN^AMYB_VIGUN^Q:891-49,H:207-445^63.7%ID^E:0^RecName: Full=Beta-amylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna`AMYB_VIGUN^AMYB_VIGUN^Q:1624-1004,H:3-209^73.43%ID^E:0^RecName: Full=Beta-amylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna",".","TRINITY_DN46608_c2_g1_i6.p1","953-1579[-]","AMYB_VIGUN^AMYB_VIGUN^Q:1-192,H:18-209^75.52%ID^E:5e-105^RecName: Full=Beta-amylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna","PF01373.14^Glyco_hydro_14^Glycosyl hydrolase family 14^1-205^E:3.3e-63",".",".",".",".","GO:0016161^molecular_function^beta-amylase activity`GO:0000272^biological_process^polysaccharide catabolic process","GO:0016161^molecular_function^beta-amylase activity`GO:0000272^biological_process^polysaccharide catabolic process",".","."]
["TRINITY_DN45685_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",8.39452277846621,0,0,"TRINITY_DN45685_c1_g1_i7","GLO2_ARATH^GLO2_ARATH^Q:462-286,H:307-365^89.83%ID^E:1e-65^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLO2_ARATH^GLO2_ARATH^Q:916-554,H:238-307^51.24%ID^E:1e-65^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLO2_ARATH^GLO2_ARATH^Q:1230-1162,H:194-216^95.65%ID^E:1e-65^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLO2_ARATH^GLO2_ARATH^Q:1073-996,H:214-239^73.08%ID^E:1e-65^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLO2_ARATH^GLO2_ARATH^Q:1603-1292,H:102-206^81.9%ID^E:2e-46^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLO2_ARATH^GLO2_ARATH^Q:2626-2363,H:2-89^88.64%ID^E:2e-44^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45685_c1_g1_i7.p1","2318-2632[-]","GLO5_ORYSJ^GLO5_ORYSJ^Q:1-90,H:1-90^88.89%ID^E:5e-53^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF01070.15^FMN_dh^FMN-dependent dehydrogenase^14-91^E:4.4e-29",".",".","COG1304^Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity)","KEGG:osa:4342420`KO:K11517","GO:0005777^cellular_component^peroxisome`GO:0010181^molecular_function^FMN binding`GO:0008891^molecular_function^glycolate oxidase activity`GO:0052853^molecular_function^long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity`GO:0052854^molecular_function^medium-chain-(S)-2-hydroxy-acid oxidase activity`GO:0052852^molecular_function^very-long-chain-(S)-2-hydroxy-acid oxidase activity`GO:0019048^biological_process^modulation by virus of host morphology or physiology`GO:0009854^biological_process^oxidative photosynthetic carbon pathway`GO:0009853^biological_process^photorespiration`GO:0010109^biological_process^regulation of photosynthesis","GO:0016491^molecular_function^oxidoreductase activity",".","."]
["TRINITY_DN46270_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",8.38427999281319,0,0,"TRINITY_DN46270_c2_g3_i2","F16P1_BRANA^F16P1_BRANA^Q:1081-1656,H:220-411^89.06%ID^E:2e-105^RecName: Full=Fructose-1,6-bisphosphatase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica`F16P1_BRANA^F16P1_BRANA^Q:254-724,H:52-213^84.57%ID^E:9e-83^RecName: Full=Fructose-1,6-bisphosphatase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN46270_c2_g3_i2.p1","92-847[+]","F16P1_SOYBN^F16P1_SOYBN^Q:6-218,H:2-214^76.85%ID^E:2e-104^RecName: Full=Fructose-1,6-bisphosphatase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00316.17^FBPase^Fructose-1-6-bisphosphatase, N-terminal domain^75-203^E:3e-40",".",".","COG0158^D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1","KEGG:gmx:547809`KO:K03841","GO:0009507^cellular_component^chloroplast`GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0046872^molecular_function^metal ion binding`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0042578^molecular_function^phosphoric ester hydrolase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45400_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",8.3203849831933,0,0,"TRINITY_DN45400_c2_g1_i2","TL203_ARATH^TL203_ARATH^Q:886-497,H:149-278^82.31%ID^E:7e-51^RecName: Full=Thylakoid lumenal protein TL20.3, chloroplastic {ECO:0000303|PubMed:20049866};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TL203_ARATH^TL203_ARATH^Q:2442-1999,H:1-163^55.76%ID^E:5e-37^RecName: Full=Thylakoid lumenal protein TL20.3, chloroplastic {ECO:0000303|PubMed:20049866};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45400_c2_g1_i2.p1","1996-2442[-]","TL203_ARATH^TL203_ARATH^Q:1-148,H:1-163^55.76%ID^E:1e-41^RecName: Full=Thylakoid lumenal protein TL20.3, chloroplastic {ECO:0000303|PubMed:20049866};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00805.19^Pentapeptide^Pentapeptide repeats (8 copies)^94-133^E:3.4e-07`PF00805.19^Pentapeptide^Pentapeptide repeats (8 copies)^110-148^E:4.1e-08",".",".","COG1357^pathogenesis",".","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid",".",".","."]
["TRINITY_DN41297_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",8.31483927643203,0,0,"TRINITY_DN41297_c0_g1_i1","CB11_SOLLC^CB11_SOLLC^Q:291-1010,H:1-240^85.12%ID^E:3e-145^RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN41297_c0_g1_i1.p1","291-1019[+]","CB11_SOLLC^CB11_SOLLC^Q:1-240,H:1-240^85.12%ID^E:8e-149^RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^56-210^E:3.6e-46",".",".","ENOG410XVD6^Chlorophyll A-B binding protein","KEGG:sly:544310`KO:K08907","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0010287^cellular_component^plastoglobule`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0031409^molecular_function^pigment binding`GO:0009768^biological_process^photosynthesis, light harvesting in photosystem I`GO:0018298^biological_process^protein-chromophore linkage`GO:0009416^biological_process^response to light stimulus",".",".","."]
["TRINITY_DN42129_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",8.28699649887376,0,0,"TRINITY_DN42129_c0_g1_i4","MDHP_MEDSA^MDHP_MEDSA^Q:1895-837,H:3-357^81.74%ID^E:0^RecName: Full=Malate dehydrogenase [NADP], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago`MDHP_MEDSA^MDHP_MEDSA^Q:507-265,H:357-437^86.42%ID^E:3e-30^RecName: Full=Malate dehydrogenase [NADP], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN42129_c0_g1_i4.p1","780-1913[-]","MDHP_MEDSA^MDHP_MEDSA^Q:7-359,H:3-357^81.74%ID^E:0^RecName: Full=Malate dehydrogenase [NADP], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF00056.20^Ldh_1_N^lactate/malate dehydrogenase, NAD binding domain^98-245^E:1.8e-34`PF02866.15^Ldh_1_C^lactate/malate dehydrogenase, alpha/beta C-terminal domain^248-360^E:1e-23",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0046554^molecular_function^malate dehydrogenase (NADP+) activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006108^biological_process^malate metabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",".","."]
["TRINITY_DN41775_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",8.13570305953815,0,0,"TRINITY_DN41775_c0_g1_i4","PAP4_ARATH^PAP4_ARATH^Q:1002-595,H:62-197^64.71%ID^E:1e-46^RecName: Full=Probable plastid-lipid-associated protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PAP4_ARATH^PAP4_ARATH^Q:408-277,H:197-240^77.27%ID^E:3e-16^RecName: Full=Probable plastid-lipid-associated protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41775_c0_g1_i4.p1","523-1170[-]","PAP4_ARATH^PAP4_ARATH^Q:57-192,H:62-197^64.71%ID^E:3e-56^RecName: Full=Probable plastid-lipid-associated protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04755.9^PAP_fibrillin^PAP_fibrillin^68-184^E:1.6e-28",".",".","ENOG4111HBZ^plastid-lipid-associated protein 4","KEGG:ath:AT3G26070","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010287^cellular_component^plastoglobule",".",".","."]
["TRINITY_DN44114_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",8.12350978361522,0,0,"TRINITY_DN44114_c2_g2_i2","PGP1B_ARATH^PGP1B_ARATH^Q:801-448,H:210-328^68.8%ID^E:1e-42^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PGP1B_ARATH^PGP1B_ARATH^Q:383-273,H:326-362^75.68%ID^E:1e-42^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44114_c2_g2_i2.p1","340-642[-]","PGP1B_ARATH^PGP1B_ARATH^Q:1-65,H:264-328^90.77%ID^E:1e-33^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13242.3^Hydrolase_like^HAD-hyrolase-like^16-66^E:8.4e-18`PF13419.3^HAD_2^Haloacid dehalogenase-like hydrolase^17-62^E:2e-05`PF09419.7^PGP_phosphatase^Mitochondrial PGP phosphatase^23-59^E:0.00026",".",".","COG0647^Hydrolase","KEGG:ath:AT5G36700`KEGG:ath:AT5G36790`KO:K19269","GO:0009507^cellular_component^chloroplast`GO:0008967^molecular_function^phosphoglycolate phosphatase activity`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN41680_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",8.12347501229721,0,0,"TRINITY_DN41680_c0_g1_i2","STR14_ARATH^STR14_ARATH^Q:300-836,H:39-217^77.65%ID^E:1e-83^RecName: Full=Rhodanese-like domain-containing protein 14, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41680_c0_g1_i2.p1","159-854[+]","STR14_ARATH^STR14_ARATH^Q:2-231,H:1-222^66.38%ID^E:2e-102^RecName: Full=Rhodanese-like domain-containing protein 14, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00581.17^Rhodanese^Rhodanese-like domain^88-221^E:6.2e-14",".",".","ENOG4111JU1^Rhodanese-like domain containing protein","KEGG:ath:AT4G27700","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane",".",".","."]
["TRINITY_DN45740_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",8.06323952829169,0,0,"TRINITY_DN45740_c5_g1_i5","BEBT_TOBAC^BEBT_TOBAC^Q:782-3,H:2-260^68.08%ID^E:1e-125^RecName: Full=Benzyl alcohol O-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45740_c5_g1_i5.p1","3-779[-]","BEBT_TOBAC^BEBT_TOBAC^Q:2-259,H:4-260^68.6%ID^E:4e-126^RecName: Full=Benzyl alcohol O-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF02458.12^Transferase^Transferase family^10-248^E:1.7e-49",".",".",".",".","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN46799_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",8.02486193111584,0,0,"TRINITY_DN46799_c1_g2_i7","DHGY_CUCSA^DHGY_CUCSA^Q:404-1042,H:1-185^78.4%ID^E:5e-91^RecName: Full=Glycerate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN46799_c1_g2_i7.p2","404-901[+]","DHGY_CUCSA^DHGY_CUCSA^Q:1-159,H:1-159^88.05%ID^E:3e-90^RecName: Full=Glycerate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF00389.27^2-Hacid_dh^D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain^35-139^E:2e-15",".",".",".","KEGG:csv:101209132`KO:K15893","GO:0005777^cellular_component^peroxisome`GO:0008465^molecular_function^glycerate dehydrogenase activity`GO:0051287^molecular_function^NAD binding`GO:0009854^biological_process^oxidative photosynthetic carbon pathway","GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0051287^molecular_function^NAD binding`GO:0008152^biological_process^metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43339_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",8.00353073802763,0,0,"TRINITY_DN43339_c0_g2_i2","Y1669_ARATH^Y1669_ARATH^Q:905-591,H:1-111^56.25%ID^E:8e-59^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1669_ARATH^Y1669_ARATH^Q:588-277,H:109-180^53.85%ID^E:8e-59^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1669_ARATH^Y1669_ARATH^Q:221-3,H:173-211^42.47%ID^E:8e-59^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43339_c0_g2_i2.p1","579-899[-]","Y1669_ARATH^Y1669_ARATH^Q:21-103,H:30-111^68.67%ID^E:4e-31^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00248.18^Aldo_ket_red^Aldo/keto reductase family^52-101^E:2.2e-06",".",".","COG0667^Aldo keto reductase","KEGG:ath:AT1G06690","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010287^cellular_component^plastoglobule`GO:0016491^molecular_function^oxidoreductase activity",".",".","."]
["TRINITY_DN44537_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",7.97629568533806,0,0,"TRINITY_DN44537_c5_g1_i3","E13G_TOBAC^E13G_TOBAC^Q:239-1249,H:29-343^46.04%ID^E:3e-90^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44537_c5_g1_i3.p1","335-1252[+]","E13G_TOBAC^E13G_TOBAC^Q:1-305,H:61-343^45.95%ID^E:3e-80^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^1-304^E:1.1e-84",".",".",".",".","GO:0005615^cellular_component^extracellular space`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN37545_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",7.95265244299762,0,0,"TRINITY_DN37545_c0_g1_i1","STEP2_ARATH^STEP2_ARATH^Q:376-855,H:37-202^58.33%ID^E:1e-43^RecName: Full=Stress enhanced protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37545_c0_g1_i1.p1","310-858[+]","STEP2_ARATH^STEP2_ARATH^Q:28-182,H:42-202^58.9%ID^E:2e-57^RecName: Full=Stress enhanced protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YH9Q^Stress enhanced protein 2","KEGG:ath:AT2G21970","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0071486^biological_process^cellular response to high light intensity`GO:0071492^biological_process^cellular response to UV-A`GO:0009765^biological_process^photosynthesis, light harvesting`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN46619_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",7.92919271513727,0,0,"TRINITY_DN46619_c3_g2_i2","TL19_ARATH^TL19_ARATH^Q:1230-787,H:79-226^75.68%ID^E:2e-77^RecName: Full=Thylakoid lumenal 19 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46619_c3_g2_i2.p1","781-1503[-]","TL19_ARATH^TL19_ARATH^Q:70-239,H:57-226^77.65%ID^E:3e-100^RecName: Full=Thylakoid lumenal 19 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01789.13^PsbP^PsbP^95-237^E:5e-10",".",".","ENOG4111I6X^Thylakoid lumenal 19 kDa protein","KEGG:ath:AT3G63540","GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0019898^cellular_component^extrinsic component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN44209_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",7.90915217436812,0,0,"TRINITY_DN44209_c3_g2_i2","GOLS1_AJURE^GOLS1_AJURE^Q:1282-335,H:1-319^80.43%ID^E:0^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga",".","TRINITY_DN44209_c3_g2_i2.p1","290-1282[-]","GOLS1_AJURE^GOLS1_AJURE^Q:1-330,H:1-333^80.95%ID^E:0^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga","PF01501.17^Glyco_transf_8^Glycosyl transferase family 8^30-272^E:2.1e-40",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0047216^molecular_function^inositol 3-alpha-galactosyltransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0052576^biological_process^carbohydrate storage`GO:0070417^biological_process^cellular response to cold`GO:0006012^biological_process^galactose metabolic process`GO:0008152^biological_process^metabolic process`GO:0010325^biological_process^raffinose family oligosaccharide biosynthetic process","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN39557_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",7.86400806097203,0,0,"TRINITY_DN39557_c0_g1_i2","RFA1A_ARATH^RFA1A_ARATH^Q:296-2173,H:1-636^68.49%ID^E:0^RecName: Full=Replication protein A 70 kDa DNA-binding subunit A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39557_c0_g1_i2.p1","296-2206[+]","RFA1A_ARATH^RFA1A_ARATH^Q:1-626,H:1-636^68.49%ID^E:0^RecName: Full=Replication protein A 70 kDa DNA-binding subunit A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04057.9^Rep-A_N^Replication factor-A protein 1, N-terminal domain^5-97^E:4.8e-30`PF01336.22^tRNA_anti-codon^OB-fold nucleic acid binding domain^202-283^E:2.2e-10`PF16900.2^REPA_OB_2^Replication protein A OB domain^311-415^E:8.6e-30`PF08646.7^Rep_fac-A_C^Replication factor-A C terminal domain^473-623^E:1.6e-50",".",".","COG1599^DNA replication","KEGG:ath:AT2G06510`KO:K07466","GO:0000790^cellular_component^nuclear chromatin`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0051026^biological_process^chiasma assembly`GO:0006281^biological_process^DNA repair`GO:0006260^biological_process^DNA replication`GO:0048232^biological_process^male gamete generation`GO:0007141^biological_process^male meiosis I`GO:0009555^biological_process^pollen development`GO:0007131^biological_process^reciprocal meiotic recombination","GO:0003677^molecular_function^DNA binding`GO:0006260^biological_process^DNA replication`GO:0005634^cellular_component^nucleus`GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN44923_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",7.8284335492457,0,0,"TRINITY_DN44923_c1_g1_i6","ELIP1_ARATH^ELIP1_ARATH^Q:206-739,H:1-195^46.94%ID^E:7e-39^RecName: Full=Early light-induced protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44923_c1_g1_i6.p1","206-748[+]","DS22_CRAPL^DS22_CRAPL^Q:1-180,H:1-199^47.24%ID^E:3e-50^RecName: Full=Desiccation stress protein DSP-22, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Linderniaceae; Craterostigma","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^70-170^E:1.9e-08",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN43854_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",7.79482347840743,0,0,"TRINITY_DN43854_c0_g1_i5","CHUP1_ARATH^CHUP1_ARATH^Q:678-3614,H:1-988^68.31%ID^E:0^RecName: Full=Protein CHUP1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43854_c0_g1_i5.p1","678-3632[+]","CHUP1_ARATH^CHUP1_ARATH^Q:1-979,H:1-988^69.69%ID^E:0^RecName: Full=Protein CHUP1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^17^0.539^YES",".","ENOG4111F63^Chloroplast unusual positioning","KEGG:ath:AT3G25690","GO:0009507^cellular_component^chloroplast`GO:0009707^cellular_component^chloroplast outer membrane`GO:0009902^biological_process^chloroplast relocation",".",".","."]
["TRINITY_DN45836_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",7.75877577573154,0,0,"TRINITY_DN45836_c0_g6_i13","CRD1_GOSHI^CRD1_GOSHI^Q:2732-1515,H:1-405^87.96%ID^E:0^RecName: Full=Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium",".","TRINITY_DN45836_c0_g6_i13.p1","1512-2732[-]","CRD1_GOSHI^CRD1_GOSHI^Q:1-406,H:1-405^88.45%ID^E:0^RecName: Full=Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium","PF02915.14^Rubrerythrin^Rubrerythrin^131-264^E:5.1e-42",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0048529^molecular_function^magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity`GO:0046872^molecular_function^metal ion binding`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0015979^biological_process^photosynthesis","GO:0016491^molecular_function^oxidoreductase activity`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47690_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",7.65170753072328,0,0,"TRINITY_DN47690_c0_g2_i3","YSL3_ARATH^YSL3_ARATH^Q:2410-389,H:19-669^62.43%ID^E:0^RecName: Full=Metal-nicotianamine transporter YSL3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47690_c0_g2_i3.p1","365-2035[-]","YSL1_ARATH^YSL1_ARATH^Q:3-550,H:127-672^65.15%ID^E:0^RecName: Full=Metal-nicotianamine transporter YSL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03169.12^OPT^OPT oligopeptide transporter protein^28-535^E:2.5e-111",".",".","COG1297^oligo-peptide transporter","KEGG:ath:AT4G24120","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0003006^biological_process^developmental process involved in reproduction`GO:0006811^biological_process^ion transport`GO:0055072^biological_process^iron ion homeostasis`GO:0010039^biological_process^response to iron ion`GO:0048316^biological_process^seed development`GO:0055085^biological_process^transmembrane transport","GO:0055085^biological_process^transmembrane transport",".","."]
["TRINITY_DN36708_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",7.58375360993151,0,0,"TRINITY_DN36708_c0_g2_i3","TL16_ARATH^TL16_ARATH^Q:483-139,H:39-159^52.89%ID^E:1e-31^RecName: Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36708_c0_g2_i3.p1","85-603[-]","TL16_ARATH^TL16_ARATH^Q:14-153,H:13-157^48.65%ID^E:4e-33^RecName: Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XY5M^Thylakoid lumenal 16.5 kDa protein","KEGG:ath:AT4G02530","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0009735^biological_process^response to cytokinin",".",".","."]
["TRINITY_DN23293_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",7.57316363029981,0,0,"TRINITY_DN23293_c0_g1_i1","ATPX_SPIOL^ATPX_SPIOL^Q:839-390,H:72-221^81.33%ID^E:7e-69^RecName: Full=ATP synthase subunit b', chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN23293_c0_g1_i1.p1","384-1040[-]","ATPX_SPIOL^ATPX_SPIOL^Q:56-218,H:60-222^77.3%ID^E:4e-82^RecName: Full=ATP synthase subunit b', chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00430.15^ATP-synt_B^ATP synthase B/B' CF(0)^86-215^E:4.7e-15`PF01442.15^Apolipoprotein^Apolipoprotein A1/A4/E domain^125-213^E:0.0045",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0045263^cellular_component^proton-transporting ATP synthase complex, coupling factor F(o)`GO:0005524^molecular_function^ATP binding`GO:0015078^molecular_function^hydrogen ion transmembrane transporter activity`GO:0015986^biological_process^ATP synthesis coupled proton transport","GO:0015078^molecular_function^hydrogen ion transmembrane transporter activity`GO:0015986^biological_process^ATP synthesis coupled proton transport`GO:0045263^cellular_component^proton-transporting ATP synthase complex, coupling factor F(o)`GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport`GO:0042157^biological_process^lipoprotein metabolic process`GO:0005576^cellular_component^extracellular region",".","."]
["TRINITY_DN46054_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",7.5696090574212,0,0,"TRINITY_DN46054_c0_g2_i5","MDHG_CUCSA^MDHG_CUCSA^Q:242-1294,H:6-355^86.89%ID^E:0^RecName: Full=Malate dehydrogenase, glyoxysomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN46054_c0_g2_i5.p1","239-1300[+]","MDHG_CUCSA^MDHG_CUCSA^Q:2-352,H:6-355^86.89%ID^E:0^RecName: Full=Malate dehydrogenase, glyoxysomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF00056.20^Ldh_1_N^lactate/malate dehydrogenase, NAD binding domain^43-185^E:1.4e-45`PF02866.15^Ldh_1_C^lactate/malate dehydrogenase, alpha/beta C-terminal domain^187-350^E:2.7e-47",".",".",".","KEGG:csv:101219252`KO:K00026","GO:0009514^cellular_component^glyoxysome`GO:0030060^molecular_function^L-malate dehydrogenase activity`GO:0006097^biological_process^glyoxylate cycle`GO:0006108^biological_process^malate metabolic process`GO:0006099^biological_process^tricarboxylic acid cycle","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",".","."]
["TRINITY_DN45288_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",7.55585789912899,0,0,"TRINITY_DN45288_c5_g1_i3","LYK4_ARATH^LYK4_ARATH^Q:19-1857,H:7-600^45.65%ID^E:2e-155^RecName: Full=LysM domain receptor-like kinase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45288_c5_g1_i3.p1","1-1884[+]","LYK4_ARATH^LYK4_ARATH^Q:7-619,H:7-600^46.23%ID^E:4e-171^RecName: Full=LysM domain receptor-like kinase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01476.17^LysM^LysM domain^123-168^E:0.013`PF00069.22^Pkinase^Protein kinase domain^378-614^E:3.8e-38`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^381-615^E:2.6e-36","sigP:1^21^0.904^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G23770","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0008061^molecular_function^chitin binding`GO:0004672^molecular_function^protein kinase activity`GO:0071323^biological_process^cellular response to chitin`GO:0071219^biological_process^cellular response to molecule of bacterial origin`GO:0045087^biological_process^innate immune response","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46247_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",7.53730309379724,0,0,"TRINITY_DN46247_c3_g1_i1","NIFU3_ARATH^NIFU3_ARATH^Q:729-247,H:75-236^81.48%ID^E:4e-81^RecName: Full=NifU-like protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46247_c3_g1_i1.p1","244-738[-]","NIFU3_ARATH^NIFU3_ARATH^Q:4-164,H:75-236^81.48%ID^E:4e-88^RecName: Full=NifU-like protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01106.14^NifU^NifU-like domain^18-83^E:7.7e-26`PF01106.14^NifU^NifU-like domain^99-160^E:3e-12",".",".","COG0694^metallo-sulfur cluster assembly","KEGG:ath:AT4G25910","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005506^molecular_function^iron ion binding`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0005198^molecular_function^structural molecule activity`GO:0016226^biological_process^iron-sulfur cluster assembly","GO:0005506^molecular_function^iron ion binding`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0016226^biological_process^iron-sulfur cluster assembly",".","."]
["TRINITY_DN45715_c3_g6","leaves S. abrotanoides","roots S. abrotanoides",7.53382883768737,0,0,"TRINITY_DN45715_c3_g6_i1","PGL1A_ARATH^PGL1A_ARATH^Q:255-1214,H:44-324^64.09%ID^E:2e-117^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45715_c3_g6_i1.p3","162-551[+]","PGL1A_ARATH^PGL1A_ARATH^Q:32-124,H:44-138^68.75%ID^E:1e-36^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4110C1Q^PGR5-like protein 1A","KEGG:ath:AT4G22890","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009579^cellular_component^thylakoid`GO:0042802^molecular_function^identical protein binding`GO:0016730^molecular_function^oxidoreductase activity, acting on iron-sulfur proteins as donors`GO:0015979^biological_process^photosynthesis`GO:0009773^biological_process^photosynthetic electron transport in photosystem I",".",".","."]
["TRINITY_DN46085_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",7.36798469827859,0,0,"TRINITY_DN46085_c3_g1_i9","PHOT2_ARATH^PHOT2_ARATH^Q:3198-424,H:19-910^69.49%ID^E:0^RecName: Full=Phototropin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46085_c3_g1_i9.p1","418-3201[-]","PHOT2_ARATH^PHOT2_ARATH^Q:2-926,H:19-910^69.49%ID^E:0^RecName: Full=Phototropin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13426.4^PAS_9^PAS domain^149-245^E:8.4e-20`PF00989.22^PAS^PAS fold^155-240^E:5.5e-08`PF08447.9^PAS_3^PAS fold^155-239^E:6.7e-08`PF13426.4^PAS_9^PAS domain^417-509^E:1.2e-19`PF00989.22^PAS^PAS fold^420-509^E:1.8e-06`PF08447.9^PAS_3^PAS fold^421-506^E:9.3e-06`PF00069.22^Pkinase^Protein kinase domain^597-881^E:3.1e-59`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^599-744^E:6.8e-15`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^785-864^E:1.4e-05",".",".","COG2202^Histidine kinase",".","GO:0005794^cellular_component^Golgi apparatus`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0009882^molecular_function^blue light photoreceptor activity`GO:0010181^molecular_function^FMN binding`GO:0042802^molecular_function^identical protein binding`GO:0016301^molecular_function^kinase activity`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009785^biological_process^blue light signaling pathway`GO:0009902^biological_process^chloroplast relocation`GO:0007623^biological_process^circadian rhythm`GO:0035556^biological_process^intracellular signal transduction`GO:0010362^biological_process^negative regulation of anion channel activity by blue light`GO:0009638^biological_process^phototropism`GO:0046777^biological_process^protein autophosphorylation`GO:0018298^biological_process^protein-chromophore linkage`GO:0009637^biological_process^response to blue light`GO:0009735^biological_process^response to cytokinin`GO:0010118^biological_process^stomatal movement","GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN41072_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",7.30691068052217,0,0,"TRINITY_DN41072_c0_g1_i1","PRRP1_ARATH^PRRP1_ARATH^Q:3611-1842,H:30-568^54.91%ID^E:0^RecName: Full=Proteinaceous RNase P 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41072_c0_g1_i1.p1","2433-3692[-]","PRRP1_ARATH^PRRP1_ARATH^Q:2-415,H:1-416^52.21%ID^E:2e-130^RecName: Full=Proteinaceous RNase P 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^88-297^E:1.8e-78`PF01535.17^PPR^PPR repeat^104-124^E:0.31`PF16953.2^PRORP^Protein-only RNase P^337-415^E:1.7e-18",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT2G32230`KO:K18213","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0004526^molecular_function^ribonuclease P activity`GO:0090501^biological_process^RNA phosphodiester bond hydrolysis`GO:0090502^biological_process^RNA phosphodiester bond hydrolysis, endonucleolytic`GO:0001682^biological_process^tRNA 5'-leader removal`GO:0008033^biological_process^tRNA processing",".",".","."]
["TRINITY_DN42329_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",7.25891658114457,0,0,"TRINITY_DN42329_c0_g2_i2","GSTF_HYOMU^GSTF_HYOMU^Q:129-752,H:3-209^47.6%ID^E:3e-66^RecName: Full=Glutathione S-transferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Hyoscyamus",".","TRINITY_DN42329_c0_g2_i2.p1","117-785[+]","GSTF_HYOMU^GSTF_HYOMU^Q:5-212,H:3-209^47.6%ID^E:1e-67^RecName: Full=Glutathione S-transferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Hyoscyamus","PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^4-76^E:1.1e-16`PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^8-82^E:2.1e-11`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^13-78^E:5.8e-09`PF00043.22^GST_C^Glutathione S-transferase, C-terminal domain^127-205^E:1.6e-13`PF14497.3^GST_C_3^Glutathione S-transferase, C-terminal domain^133-208^E:5.9e-05`PF13410.3^GST_C_2^Glutathione S-transferase, C-terminal domain^135-197^E:2.6e-07",".",".",".",".","GO:0004364^molecular_function^glutathione transferase activity`GO:0009734^biological_process^auxin-activated signaling pathway","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44217_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",7.2498854576975,0,0,"TRINITY_DN44217_c0_g1_i7","RECA_PROMM^RECA_PROMM^Q:280-672,H:15-145^66.41%ID^E:7e-97^RecName: Full=Protein RecA {ECO:0000255|HAMAP-Rule:MF_00268};^Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus`RECA_PROMM^RECA_PROMM^Q:977-1507,H:175-349^55.93%ID^E:7e-97^RecName: Full=Protein RecA {ECO:0000255|HAMAP-Rule:MF_00268};^Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus`RECA_PROMM^RECA_PROMM^Q:795-887,H:144-174^54.84%ID^E:7e-97^RecName: Full=Protein RecA {ECO:0000255|HAMAP-Rule:MF_00268};^Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus",".","TRINITY_DN44217_c0_g1_i7.p1","989-1582[+]","RECAC_ARATH^RECAC_ARATH^Q:1-172,H:237-408^84.88%ID^E:4e-101^RecName: Full=DNA repair protein recA homolog 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00154.18^RecA^recA bacterial DNA recombination protein^2-111^E:1.3e-43",".",".","COG0468^Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (By similarity)",".","GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0008094^molecular_function^DNA-dependent ATPase activity`GO:0003690^molecular_function^double-stranded DNA binding`GO:0000400^molecular_function^four-way junction DNA binding`GO:0000150^molecular_function^recombinase activity`GO:0003697^molecular_function^single-stranded DNA binding`GO:0006974^biological_process^cellular response to DNA damage stimulus`GO:0000730^biological_process^DNA recombinase assembly`GO:0006312^biological_process^mitotic recombination`GO:0010212^biological_process^response to ionizing radiation`GO:0042148^biological_process^strand invasion","GO:0003697^molecular_function^single-stranded DNA binding`GO:0005524^molecular_function^ATP binding`GO:0006281^biological_process^DNA repair`GO:0009432^biological_process^SOS response",".","."]
["TRINITY_DN43758_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",7.20059314417703,0,0,"TRINITY_DN43758_c2_g1_i4","GPPL2_ARATH^GPPL2_ARATH^Q:870-1511,H:106-319^86.92%ID^E:2e-123^RecName: Full=Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GPPL2_ARATH^GPPL2_ARATH^Q:667-816,H:57-105^70%ID^E:1e-12^RecName: Full=Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43758_c2_g1_i4.p1","942-1514[+]","GPPL2_ARATH^GPPL2_ARATH^Q:1-190,H:130-319^86.84%ID^E:3e-111^RecName: Full=Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13419.3^HAD_2^Haloacid dehalogenase-like hydrolase^23-146^E:2.6e-14`PF00702.23^Hydrolase^haloacid dehalogenase-like hydrolase^43-141^E:6.2e-13`PF13242.3^Hydrolase_like^HAD-hyrolase-like^103-167^E:5.4e-10",".",".","COG0637^HAD-superfamily hydrolase subfamily IA variant 3","KEGG:ath:AT3G48420","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016787^molecular_function^hydrolase activity`GO:0046872^molecular_function^metal ion binding",".",".","."]
["TRINITY_DN44342_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",7.13123672522675,0,0,"TRINITY_DN44342_c1_g2_i3","PPH_ARATH^PPH_ARATH^Q:1133-273,H:93-416^27.49%ID^E:6e-30^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44342_c1_g2_i3.p1","249-1358[-]","PPH_ARATH^PPH_ARATH^Q:76-362,H:93-416^27.49%ID^E:7e-31^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^96-343^E:1.1e-19`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^97-351^E:1.5e-22`PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^97-325^E:6.2e-14",".",".","COG0596^Alpha beta hydrolase","KEGG:ath:AT5G13800","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0080124^molecular_function^pheophytinase activity`GO:0015996^biological_process^chlorophyll catabolic process",".",".","."]
["TRINITY_DN46883_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",7.11831944914563,0,0,"TRINITY_DN46883_c0_g1_i3","OHK1_ORYSI^OHK1_ORYSI^Q:397-3231,H:7-926^50.3%ID^E:0^RecName: Full=Probable histidine kinase 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46883_c0_g1_i3.p1","370-3243[+]","OHK1_ORYSI^OHK1_ORYSI^Q:10-957,H:7-929^51.13%ID^E:0^RecName: Full=Probable histidine kinase 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00512.22^HisKA^His Kinase A (phospho-acceptor) domain^372-435^E:8.4e-18`PF02518.23^HATPase_c^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^481-673^E:4.4e-27`PF00072.21^Response_reg^Response regulator receiver domain^848-915^E:8.3e-14",".",".","COG0642^Histidine kinase",".","GO:0005773^cellular_component^vacuole`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0043481^biological_process^anthocyanin accumulation in tissues in response to UV light`GO:0048440^biological_process^carpel development`GO:0070301^biological_process^cellular response to hydrogen peroxide`GO:0071219^biological_process^cellular response to molecule of bacterial origin`GO:0071732^biological_process^cellular response to nitric oxide`GO:0009736^biological_process^cytokinin-activated signaling pathway`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:0010105^biological_process^negative regulation of ethylene-activated signaling pathway`GO:0090333^biological_process^regulation of stomatal closure`GO:0048364^biological_process^root development`GO:0010048^biological_process^vernalization response","GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0007165^biological_process^signal transduction`GO:0000160^biological_process^phosphorelay signal transduction system",".","."]
["TRINITY_DN46691_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",7.03654550150383,0,0,"TRINITY_DN46691_c4_g1_i11","CB12_SOLLC^CB12_SOLLC^Q:3067-2546,H:93-266^95.4%ID^E:2e-110^RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN46691_c4_g1_i11.p1","2309-3001[-]","CB12_PETHY^CB12_PETHY^Q:1-152,H:115-266^96.05%ID^E:2e-105^RecName: Full=Chlorophyll a-b binding protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^1-126^E:1.5e-29",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0009765^biological_process^photosynthesis, light harvesting`GO:0018298^biological_process^protein-chromophore linkage",".",".","."]
["TRINITY_DN44209_c3_g3","leaves S. abrotanoides","roots S. abrotanoides",6.99754785242063,0,0,"TRINITY_DN44209_c3_g3_i3","GOLS1_AJURE^GOLS1_AJURE^Q:1616-969,H:1-216^86.11%ID^E:1e-130^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga`GOLS1_AJURE^GOLS1_AJURE^Q:365-171,H:264-333^81.43%ID^E:6e-28^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga`GOLS1_AJURE^GOLS1_AJURE^Q:837-697,H:215-261^89.36%ID^E:1e-19^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga",".","TRINITY_DN44209_c3_g3_i3.p1","951-1616[-]","GOLS1_AJURE^GOLS1_AJURE^Q:1-216,H:1-216^86.11%ID^E:2e-136^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga","PF01501.17^Glyco_transf_8^Glycosyl transferase family 8^28-204^E:5.5e-25",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0047216^molecular_function^inositol 3-alpha-galactosyltransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0052576^biological_process^carbohydrate storage`GO:0070417^biological_process^cellular response to cold`GO:0006012^biological_process^galactose metabolic process`GO:0008152^biological_process^metabolic process`GO:0010325^biological_process^raffinose family oligosaccharide biosynthetic process","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN44092_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",6.96963811957505,0,0,"TRINITY_DN44092_c2_g4_i1","PLGG1_ARATH^PLGG1_ARATH^Q:1123-2067,H:198-512^82.54%ID^E:2e-171^RecName: Full=Plastidal glycolate/glycerate translocator 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PLGG1_ARATH^PLGG1_ARATH^Q:221-631,H:55-192^60.14%ID^E:3e-43^RecName: Full=Plastidal glycolate/glycerate translocator 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44092_c2_g4_i1.p1","1198-2070[+]","PLGG1_ARATH^PLGG1_ARATH^Q:1-290,H:223-512^82.41%ID^E:1e-162^RecName: Full=Plastidal glycolate/glycerate translocator 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04172.13^LrgB^LrgB-like family^54-277^E:3.4e-41",".",".","COG1346^cytolysis","KEGG:ath:AT1G32080","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:1901974^molecular_function^glycerate transmembrane transporter activity`GO:0043879^molecular_function^glycolate transmembrane transporter activity`GO:0009658^biological_process^chloroplast organization`GO:1901975^biological_process^glycerate transmembrane transport`GO:0097339^biological_process^glycolate transmembrane transport`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN43461_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",6.92609930736834,0,0,"TRINITY_DN43461_c1_g1_i5","TPT_ARATH^TPT_ARATH^Q:586-1533,H:95-410^90.51%ID^E:0^RecName: Full=Triose phosphate/phosphate translocator TPT, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43461_c1_g1_i5.p1","643-1536[+]","TPT_ARATH^TPT_ARATH^Q:1-297,H:114-410^90.91%ID^E:0^RecName: Full=Triose phosphate/phosphate translocator TPT, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03151.13^TPT^Triose-phosphate Transporter family^1-281^E:6.1e-110`PF00892.17^EamA^EamA-like transporter family^137-281^E:1.3e-07",".",".","ENOG410XP1S^solute carrier family 35 member",".","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0015120^molecular_function^phosphoglycerate transmembrane transporter activity`GO:0071917^molecular_function^triose-phosphate transmembrane transporter activity`GO:0015713^biological_process^phosphoglycerate transport`GO:0009643^biological_process^photosynthetic acclimation`GO:0035436^biological_process^triose phosphate transmembrane transport","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45468_c6_g3","leaves S. abrotanoides","roots S. abrotanoides",6.86220893324837,0,0,"TRINITY_DN45468_c6_g3_i4","ACR11_ARATH^ACR11_ARATH^Q:1678-1148,H:70-247^75.84%ID^E:9e-86^RecName: Full=ACT domain-containing protein ACR11 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ACR11_ARATH^ACR11_ARATH^Q:658-530,H:248-290^86.05%ID^E:3e-15^RecName: Full=ACT domain-containing protein ACR11 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45468_c6_g3_i4.p1","1064-1546[-]","ACR11_ARATH^ACR11_ARATH^Q:1-133,H:114-247^76.12%ID^E:1e-68^RecName: Full=ACT domain-containing protein ACR11 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YCUP^protein DS12 from 2D-PAGE of leaf, chloroplastic","KEGG:ath:AT1G16880","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010319^cellular_component^stromule`GO:0016597^molecular_function^amino acid binding`GO:0008152^biological_process^metabolic process`GO:0009409^biological_process^response to cold`GO:0009735^biological_process^response to cytokinin`GO:0009416^biological_process^response to light stimulus`GO:0009744^biological_process^response to sucrose",".",".","."]
["TRINITY_DN39126_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.84829558258108,0,0,"TRINITY_DN39126_c0_g1_i5","PNSB5_ARATH^PNSB5_ARATH^Q:1055-1408,H:95-212^73.73%ID^E:4e-57^RecName: Full=Photosynthetic NDH subunit of subcomplex B 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PNSB5_ARATH^PNSB5_ARATH^Q:140-418,H:3-92^40%ID^E:2e-10^RecName: Full=Photosynthetic NDH subunit of subcomplex B 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39126_c0_g1_i5.p1","125-454[+]","PNSB5_ARATH^PNSB5_ARATH^Q:5-98,H:2-92^39.6%ID^E:1e-12^RecName: Full=Photosynthetic NDH subunit of subcomplex B 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG41127XZ^NA","KEGG:ath:AT5G43750","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0006979^biological_process^response to oxidative stress`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN43928_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",6.84086158010963,0,0,"TRINITY_DN43928_c0_g6_i2","GLK1_ARATH^GLK1_ARATH^Q:529-1755,H:1-420^46.83%ID^E:3e-70^RecName: Full=Transcription activator GLK1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43928_c0_g6_i2.p1","529-1758[+]","GLK1_ARATH^GLK1_ARATH^Q:1-409,H:1-420^50.22%ID^E:2e-95^RecName: Full=Transcription activator GLK1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^148-197^E:4.3e-08",".",".","ENOG4111SK7^Transcription factor",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:1900056^biological_process^negative regulation of leaf senescence`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN43686_c2_g10","leaves S. abrotanoides","roots S. abrotanoides",6.83972973310286,0,0,"TRINITY_DN43686_c2_g10_i1","CCU11_ARATH^CCU11_ARATH^Q:853-332,H:16-189^68.39%ID^E:6e-72^RecName: Full=Cyclin-U1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43686_c2_g10_i1.p1","236-904[-]","CCU11_ARATH^CCU11_ARATH^Q:18-191,H:16-189^68.39%ID^E:4e-74^RecName: Full=Cyclin-U1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08613.8^Cyclin^Cyclin^58-164^E:5.6e-34`PF00134.20^Cyclin_N^Cyclin, N-terminal domain^74-164^E:6e-10",".",".","ENOG4111TTK^Cyclin-dependent protein kinase","KEGG:ath:AT3G21870","GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0000079^biological_process^regulation of cyclin-dependent protein serine/threonine kinase activity","GO:0019901^molecular_function^protein kinase binding`GO:0000079^biological_process^regulation of cyclin-dependent protein serine/threonine kinase activity",".","."]
["TRINITY_DN44449_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.83925953084032,0,0,"TRINITY_DN44449_c0_g1_i1","STT7_ARATH^STT7_ARATH^Q:1240-1773,H:161-331^79.21%ID^E:5e-90^RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`STT7_ARATH^STT7_ARATH^Q:344-700,H:46-164^73.95%ID^E:4e-51^RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44449_c0_g1_i1.p1","2-730[+]","STT7_ARATH^STT7_ARATH^Q:79-233,H:15-164^62.58%ID^E:5e-56^RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XPP3^Cyclin-Dependent Kinase","KEGG:ath:AT1G68830","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0007623^biological_process^circadian rhythm`GO:0042548^biological_process^regulation of photosynthesis, light reaction",".",".","."]
["TRINITY_DN41229_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.82736845180324,0,0,"TRINITY_DN41229_c0_g1_i1","PRXQ_POPJC^PRXQ_POPJC^Q:926-285,H:1-213^77.1%ID^E:2e-109^RecName: Full=Peroxiredoxin Q, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus",".","TRINITY_DN41229_c0_g1_i1.p1","282-926[-]","PRXQ_POPJC^PRXQ_POPJC^Q:1-214,H:1-213^77.1%ID^E:2e-111^RecName: Full=Peroxiredoxin Q, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus","PF08534.7^Redoxin^Redoxin^69-202^E:1.2e-25`PF00578.18^AhpC-TSA^AhpC/TSA family^70-191^E:5.5e-42",".",".",".",".","GO:0009534^cellular_component^chloroplast thylakoid`GO:0004601^molecular_function^peroxidase activity`GO:0051920^molecular_function^peroxiredoxin activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0016209^molecular_function^antioxidant activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN39242_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",6.68066609475894,0,0,"TRINITY_DN39242_c0_g3_i1","XTH7_ARATH^XTH7_ARATH^Q:1187-351,H:15-293^75.99%ID^E:3e-162^RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase protein 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39242_c0_g3_i1.p1","348-1214[-]","XTH7_ARATH^XTH7_ARATH^Q:10-288,H:15-293^75.99%ID^E:8e-165^RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase protein 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00722.18^Glyco_hydro_16^Glycosyl hydrolases family 16^31-211^E:9.4e-59`PF06955.9^XET_C^Xyloglucan endo-transglycosylase (XET) C-terminus^237-284^E:3.9e-19","sigP:1^24^0.504^YES",".","COG2273^hydrolase family 16","KEGG:ath:AT4G37800`KO:K08235","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0016762^molecular_function^xyloglucan:xyloglucosyl transferase activity`GO:0042546^biological_process^cell wall biogenesis`GO:0071555^biological_process^cell wall organization`GO:0010411^biological_process^xyloglucan metabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process`GO:0016762^molecular_function^xyloglucan:xyloglucosyl transferase activity`GO:0006073^biological_process^cellular glucan metabolic process`GO:0005618^cellular_component^cell wall`GO:0048046^cellular_component^apoplast",".","."]
["TRINITY_DN39768_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.6397056315052,0,0,"TRINITY_DN39768_c0_g1_i1","FKB13_ARATH^FKB13_ARATH^Q:866-240,H:1-208^55.66%ID^E:3e-65^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic {ECO:0000303|PubMed:12424338};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39768_c0_g1_i1.p1","237-866[-]","FKB13_ARATH^FKB13_ARATH^Q:1-208,H:1-207^55.91%ID^E:1e-73^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic {ECO:0000303|PubMed:12424338};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00254.25^FKBP_C^FKBP-type peptidyl-prolyl cis-trans isomerase^105-205^E:3e-28",".",".","COG0545^Peptidyl-prolyl cis-trans isomerase","KEGG:ath:AT5G45680`KO:K01802","GO:0009507^cellular_component^chloroplast`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0031977^cellular_component^thylakoid lumen`GO:0005528^molecular_function^FK506 binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0061077^biological_process^chaperone-mediated protein folding`GO:0000413^biological_process^protein peptidyl-prolyl isomerization","GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN46595_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",6.63032978790236,0,0,"TRINITY_DN46595_c1_g1_i3","TRXM4_ARATH^TRXM4_ARATH^Q:870-436,H:41-191^59.48%ID^E:1e-54^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46595_c1_g1_i3.p1","433-957[-]","TRXM4_ARATH^TRXM4_ARATH^Q:1-174,H:1-191^51.3%ID^E:3e-59^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^71-172^E:8.9e-31`PF13098.3^Thioredoxin_2^Thioredoxin-like domain^86-167^E:1.8e-07`PF14595.3^Thioredoxin_9^Thioredoxin^94-164^E:2.9e-07",".",".","COG0526^Thioredoxin","KEGG:ath:AT3G15360`KO:K03671","GO:0005618^cellular_component^cell wall`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0008047^molecular_function^enzyme activator activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0043086^biological_process^negative regulation of catalytic activity`GO:0055114^biological_process^oxidation-reduction process`GO:0043085^biological_process^positive regulation of catalytic activity`GO:0006457^biological_process^protein folding`GO:0006109^biological_process^regulation of carbohydrate metabolic process`GO:0009735^biological_process^response to cytokinin`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN47486_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",6.61648549800275,0,0,"TRINITY_DN47486_c2_g1_i1","C82G1_ARATH^C82G1_ARATH^Q:1651-206,H:38-513^50.62%ID^E:1e-172^RecName: Full=Cytochrome P450 82G1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47486_c2_g1_i1.p1","197-1759[-]","C82G1_ARATH^C82G1_ARATH^Q:10-518,H:6-513^49.22%ID^E:3e-176^RecName: Full=Cytochrome P450 82G1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^39-501^E:2.1e-90",".",".","COG2124^Cytochrome p450","KEGG:ath:AT3G25180`KO:K17961","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0097008^molecular_function^(3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity`GO:0097007^molecular_function^4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0006952^biological_process^defense response`GO:0044550^biological_process^secondary metabolite biosynthetic process`GO:0046246^biological_process^terpene biosynthetic process`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47261_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",6.60868164193124,0,0,"TRINITY_DN47261_c3_g1_i9","TPS7_RICCO^TPS7_RICCO^Q:1359-331,H:259-563^43.55%ID^E:2e-90^RecName: Full=Alpha-farnesene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus`TPS7_RICCO^TPS7_RICCO^Q:2369-1734,H:27-261^39.08%ID^E:2e-27^RecName: Full=Alpha-farnesene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN47261_c3_g1_i9.p1","274-1017[-]","AFS1_MALDO^AFS1_MALDO^Q:3-227,H:347-574^46.75%ID^E:2e-66^RecName: Full=(E,E)-alpha-farnesene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus","PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^2-171^E:8.8e-45",".",".",".","KEGG:mdm:103446592`KO:K14173","GO:0005737^cellular_component^cytoplasm`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016740^molecular_function^transferase activity","GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity",".","."]
["TRINITY_DN44681_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",6.59974771774456,0,0,"TRINITY_DN44681_c2_g2_i1","ATPD_TOBAC^ATPD_TOBAC^Q:339-1061,H:4-246^66.39%ID^E:5e-101^RecName: Full=ATP synthase delta chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44681_c2_g2_i1.p1","54-1070[+]","ATPD_TOBAC^ATPD_TOBAC^Q:94-336,H:2-246^67.21%ID^E:3e-110^RecName: Full=ATP synthase delta chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00213.15^OSCP^ATP synthase delta (OSCP) subunit^156-329^E:1.1e-41",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0045261^cellular_component^proton-transporting ATP synthase complex, catalytic core F(1)`GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport","GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport",".","."]
["TRINITY_DN44264_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",6.58060287718437,0,0,"TRINITY_DN44264_c1_g2_i5","CB13_SOLLC^CB13_SOLLC^Q:3866-3048,H:1-273^90.51%ID^E:8e-132^RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44264_c1_g2_i5.p1","216-2438[+]","FPA_ARATH^FPA_ARATH^Q:345-469,H:441-565^54.4%ID^E:2e-35^RecName: Full=Flowering time control protein FPA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FPA_ARATH^FPA_ARATH^Q:20-167,H:201-333^32.67%ID^E:4e-15^RecName: Full=Flowering time control protein FPA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^38-90^E:6.7e-08`PF07744.10^SPOC^SPOC domain^345-441^E:5.4e-09",".",".","COG0724^Rna-binding protein","KEGG:ath:AT2G43410","GO:0000785^cellular_component^chromatin`GO:0005634^cellular_component^nucleus`GO:0003676^molecular_function^nucleic acid binding`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0030154^biological_process^cell differentiation`GO:0031048^biological_process^chromatin silencing by small RNA`GO:0009553^biological_process^embryo sac development`GO:0009908^biological_process^flower development`GO:0006378^biological_process^mRNA polyadenylation`GO:0000398^biological_process^mRNA splicing, via spliceosome`GO:0009911^biological_process^positive regulation of flower development`GO:0006351^biological_process^transcription, DNA-templated`GO:0010228^biological_process^vegetative to reproductive phase transition of meristem","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN46535_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",6.53324752237132,0,0,"TRINITY_DN46535_c2_g1_i10","TKPR1_ARATH^TKPR1_ARATH^Q:423-1154,H:40-283^40.82%ID^E:1e-54^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TKPR1_ARATH^TKPR1_ARATH^Q:233-325,H:8-38^74.19%ID^E:1e-54^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46535_c2_g1_i10.p1","690-1160[+]","CCR1_ARATH^CCR1_ARATH^Q:7-150,H:136-276^43.75%ID^E:1e-26^RecName: Full=Cinnamoyl-CoA reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^30-116^E:7.5e-09",".",".","COG0451^Nad-dependent epimerase dehydratase",".","GO:0005829^cellular_component^cytosol`GO:0016621^molecular_function^cinnamoyl-CoA reductase activity`GO:0050662^molecular_function^coenzyme binding`GO:0007623^biological_process^circadian rhythm`GO:0009809^biological_process^lignin biosynthetic process`GO:0009409^biological_process^response to cold","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding",".","."]
["TRINITY_DN38308_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.47870470330798,0,0,"TRINITY_DN38308_c0_g1_i2","MYO2_ARATH^MYO2_ARATH^Q:1384-2292,H:864-1219^31.13%ID^E:2e-33^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MYO2_ARATH^MYO2_ARATH^Q:526-696,H:2-56^57.89%ID^E:4e-12^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38308_c0_g1_i2.p1","1573-2307[+]","MYO2_ARATH^MYO2_ARATH^Q:11-240,H:945-1219^33.33%ID^E:1e-31^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00612.24^IQ^IQ calmodulin-binding motif^11-27^E:0.00019",".",".","COG5022^myosin heavy chain","KEGG:ath:AT5G54280`KO:K10357","GO:0005768^cellular_component^endosome`GO:0016459^cellular_component^myosin complex`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0003774^molecular_function^motor activity`GO:0030048^biological_process^actin filament-based movement`GO:0006897^biological_process^endocytosis","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44139_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",6.45131033751409,0,0,"TRINITY_DN44139_c2_g4_i5","DIN1_RAPSA^DIN1_RAPSA^Q:274-83,H:117-180^62.5%ID^E:4e-23^RecName: Full=Senescence-associated protein DIN1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus`DIN1_RAPSA^DIN1_RAPSA^Q:606-487,H:79-118^55%ID^E:6e-07^RecName: Full=Senescence-associated protein DIN1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus",".","TRINITY_DN44139_c2_g4_i5.p1","442-840[-]","STR15_ARATH^STR15_ARATH^Q:70-118,H:69-117^65.31%ID^E:2e-15^RecName: Full=Rhodanese-like domain-containing protein 15, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00581.17^Rhodanese^Rhodanese-like domain^84-123^E:3.3e-05",".",".","COG0607^Rhodanese domain protein","KEGG:ath:AT4G35770","GO:0009507^cellular_component^chloroplast`GO:0009579^cellular_component^thylakoid`GO:0007568^biological_process^aging`GO:0009753^biological_process^response to jasmonic acid`GO:0006979^biological_process^response to oxidative stress`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN45047_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",6.44981314915553,0,0,"TRINITY_DN45047_c4_g1_i2","HLIP_ARATH^HLIP_ARATH^Q:232-483,H:27-110^72.62%ID^E:4e-33^RecName: Full=High-light-induced protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45047_c4_g1_i2.p1","151-486[+]","HLIP_ARATH^HLIP_ARATH^Q:28-111,H:27-110^72.62%ID^E:8e-36^RecName: Full=High-light-induced protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YTYC^One helix protein","KEGG:ath:AT5G02120","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0007623^biological_process^circadian rhythm`GO:0015979^biological_process^photosynthesis`GO:0018298^biological_process^protein-chromophore linkage`GO:0009644^biological_process^response to high light intensity",".",".","."]
["TRINITY_DN44596_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.44866303067476,0,0,"TRINITY_DN44596_c0_g1_i1","GUN4C_ARATH^GUN4C_ARATH^Q:662-123,H:82-265^60.54%ID^E:7e-69^RecName: Full=Tetrapyrrole-binding protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44596_c0_g1_i1.p1","120-878[-]","GUN4C_ARATH^GUN4C_ARATH^Q:72-252,H:81-265^60.22%ID^E:1e-73^RecName: Full=Tetrapyrrole-binding protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05419.9^GUN4^GUN4-like^69-215^E:3.3e-45",".",".","ENOG410XQHG^GUN4-like","KEGG:ath:AT3G59400","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0019899^molecular_function^enzyme binding`GO:0046906^molecular_function^tetrapyrrole binding`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0010019^biological_process^chloroplast-nucleus signaling pathway`GO:0043085^biological_process^positive regulation of catalytic activity",".",".","."]
["TRINITY_DN45122_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",6.37769408525141,0,0,"TRINITY_DN45122_c1_g5_i1","SSG1_ANTMA^SSG1_ANTMA^Q:2115-241,H:1-608^75.39%ID^E:0^RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum",".","TRINITY_DN45122_c1_g5_i1.p1","394-2115[-]","SSG1_ANTMA^SSG1_ANTMA^Q:1-563,H:1-570^78.15%ID^E:0^RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum","PF08323.8^Glyco_transf_5^Starch synthase catalytic domain^76-334^E:2.9e-74`PF00534.17^Glycos_transf_1^Glycosyl transferases group 1^393-520^E:1.9e-15`PF13692.3^Glyco_trans_1_4^Glycosyl transferases group 1^393-513^E:2.5e-10",".",".",".",".","GO:0009501^cellular_component^amyloplast`GO:0009507^cellular_component^chloroplast`GO:0033201^molecular_function^alpha-1,4-glucan synthase activity`GO:0004373^molecular_function^glycogen (starch) synthase activity`GO:0009011^molecular_function^starch synthase activity`GO:0019252^biological_process^starch biosynthetic process",".",".","."]
["TRINITY_DN43470_c3_g3","leaves S. abrotanoides","roots S. abrotanoides",6.37746219468403,0,0,"TRINITY_DN43470_c3_g3_i1","SAG39_ORYSI^SAG39_ORYSI^Q:1267-263,H:1-339^54.39%ID^E:6e-130^RecName: Full=Senescence-specific cysteine protease SAG39 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43470_c3_g3_i1.p1","260-1267[-]","SAG39_ORYSI^SAG39_ORYSI^Q:1-335,H:1-339^54.39%ID^E:1e-132^RecName: Full=Senescence-specific cysteine protease SAG39 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^35-92^E:1e-17`PF00112.20^Peptidase_C1^Papain family cysteine protease^118-334^E:1.3e-79`PF03051.12^Peptidase_C1_2^Peptidase C1-like family^275-315^E:2.9e-05","sigP:1^23^0.804^YES",".","COG4870^cathepsin",".","GO:0010282^cellular_component^senescence-associated vacuole`GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0007568^biological_process^aging`GO:0010623^biological_process^developmental programmed cell death","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis`GO:0004197^molecular_function^cysteine-type endopeptidase activity",".","."]
["TRINITY_DN44106_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",6.3458290575174,0,0,"TRINITY_DN44106_c1_g1_i3","CP29B_ARATH^CP29B_ARATH^Q:161-856,H:44-289^65.45%ID^E:2e-96^RecName: Full=RNA-binding protein CP29B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44106_c1_g1_i3.p1","41-859[+]","CP29B_ARATH^CP29B_ARATH^Q:41-272,H:44-289^65.45%ID^E:1e-102^RecName: Full=RNA-binding protein CP29B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^90-160^E:1.4e-19`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^98-161^E:0.058`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^190-260^E:5.6e-19",".",".","ENOG4111MZ2^Ribonucleoprotein","KEGG:ath:AT2G37220`KO:K11294","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0010319^cellular_component^stromule`GO:0009579^cellular_component^thylakoid`GO:0000166^molecular_function^nucleotide binding`GO:0008266^molecular_function^poly(U) RNA binding`GO:0045087^biological_process^innate immune response`GO:0006397^biological_process^mRNA processing`GO:0009737^biological_process^response to abscisic acid`GO:0009409^biological_process^response to cold","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN46358_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",6.30720626531838,0,0,"TRINITY_DN46358_c2_g1_i6","E13B_VITVI^E13B_VITVI^Q:1172-159,H:5-342^53.49%ID^E:5e-98^RecName: Full=Glucan endo-1,3-beta-glucosidase {ECO:0000250|UniProtKB:Q03467};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN46358_c2_g1_i6.p1","156-1169[-]","E13G_TOBAC^E13G_TOBAC^Q:26-336,H:32-340^56.29%ID^E:5e-114^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^26-336^E:1.4e-111","sigP:1^20^0.767^YES",".",".",".","GO:0005615^cellular_component^extracellular space`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44136_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.29247479868994,0,0,"TRINITY_DN44136_c0_g1_i2","PRPX_HORVU^PRPX_HORVU^Q:865-155,H:1-234^51.46%ID^E:3e-78^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN44136_c0_g1_i2.p1","149-865[-]","PRPX_HORVU^PRPX_HORVU^Q:1-237,H:1-234^51.46%ID^E:4e-80^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".",".",".","ENOG410YA3P^NA",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN47206_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",6.27016396512892,0,0,"TRINITY_DN47206_c4_g1_i2","MYO2_ARATH^MYO2_ARATH^Q:3281-1428,H:578-1205^54.49%ID^E:0^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47206_c4_g1_i2.p1","1368-3281[-]","MYO2_ARATH^MYO2_ARATH^Q:1-634,H:578-1219^54.6%ID^E:0^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00063.18^Myosin_head^Myosin head (motor domain)^1-295^E:6.2e-90`PF00612.24^IQ^IQ calmodulin-binding motif^336-352^E:0.011`PF00612.24^IQ^IQ calmodulin-binding motif^373-390^E:4.7e-05",".",".","COG5022^myosin heavy chain","KEGG:ath:AT5G54280`KO:K10357","GO:0005768^cellular_component^endosome`GO:0016459^cellular_component^myosin complex`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0003774^molecular_function^motor activity`GO:0030048^biological_process^actin filament-based movement`GO:0006897^biological_process^endocytosis","GO:0003774^molecular_function^motor activity`GO:0005524^molecular_function^ATP binding`GO:0016459^cellular_component^myosin complex`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44649_c2_g6","leaves S. abrotanoides","roots S. abrotanoides",6.25470617017348,0,0,"TRINITY_DN44649_c2_g6_i11","ALFC2_ARATH^ALFC2_ARATH^Q:3406-2219,H:1-398^85.43%ID^E:0^RecName: Full=Probable fructose-bisphosphate aldolase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44649_c2_g6_i11.p1","39-1667[+]","EDA2_ARATH^EDA2_ARATH^Q:66-535,H:15-482^61.73%ID^E:0^RecName: Full=Probable serine protease EDA2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05577.9^Peptidase_S28^Serine carboxypeptidase S28^107-496^E:7.1e-80",".",".","ENOG410XSGG^protease, serine, 16 (thymus)","KEGG:ath:AT2G18080","GO:0005576^cellular_component^extracellular region`GO:0008239^molecular_function^dipeptidyl-peptidase activity`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0009561^biological_process^megagametogenesis`GO:0006508^biological_process^proteolysis","GO:0008236^molecular_function^serine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46424_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",6.24882364818434,0,0,"TRINITY_DN46424_c2_g1_i1","DLO2_ARATH^DLO2_ARATH^Q:1267-242,H:18-325^33.98%ID^E:2e-36^RecName: Full=Protein DMR6-LIKE OXYGENASE 2 {ECO:0000303|PubMed:25376907};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46424_c2_g1_i1.p1","512-1360[-]","DLO1_ARATH^DLO1_ARATH^Q:23-270,H:11-266^36.05%ID^E:8e-47^RecName: Full=Protein DMR6-LIKE OXYGENASE 1 {ECO:0000303|PubMed:25376907};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^51-149^E:7.2e-24`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^205-270^E:8.4e-13",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT4G10500","GO:0046872^molecular_function^metal ion binding`GO:0016491^molecular_function^oxidoreductase activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44337_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",6.22540545535816,0,0,"TRINITY_DN44337_c2_g1_i4","COL4_ARATH^COL4_ARATH^Q:1333-242,H:1-362^47.89%ID^E:1e-71^RecName: Full=Zinc finger protein CONSTANS-LIKE 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44337_c2_g1_i4.p1","572-1354[-]","COL4_ARATH^COL4_ARATH^Q:8-224,H:1-239^51.79%ID^E:2e-63^RecName: Full=Zinc finger protein CONSTANS-LIKE 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00643.21^zf-B_box^B-box zinc finger^11-51^E:2.1e-06`PF00643.21^zf-B_box^B-box zinc finger^53-98^E:4.7e-08",".",".","COG5641^Transcription factor","KEGG:ath:AT5G24930","GO:0005634^cellular_component^nucleus`GO:0008270^molecular_function^zinc ion binding","GO:0008270^molecular_function^zinc ion binding`GO:0005622^cellular_component^intracellular",".","."]
["TRINITY_DN45086_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",6.22319173680059,0,0,"TRINITY_DN45086_c3_g1_i4","CAF2P_ARATH^CAF2P_ARATH^Q:1802-489,H:65-507^59.78%ID^E:1e-179^RecName: Full=CRS2-associated factor 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45086_c3_g1_i4.p1","303-1964[-]","CAF2P_ARATH^CAF2P_ARATH^Q:1-547,H:1-561^54.36%ID^E:0^RecName: Full=CRS2-associated factor 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01985.18^CRS1_YhbY^CRS1 / YhbY (CRM) domain^198-281^E:1.3e-16`PF01985.18^CRS1_YhbY^CRS1 / YhbY (CRM) domain^316-399^E:1.3e-12",".",".","ENOG410XQZ0^CRS2-associated factor","KEGG:ath:AT1G23400","GO:0009570^cellular_component^chloroplast stroma`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0003723^molecular_function^RNA binding`GO:0000373^biological_process^Group II intron splicing`GO:0006397^biological_process^mRNA processing","GO:0003723^molecular_function^RNA binding",".","."]
["TRINITY_DN45519_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.14229587552008,0,0,"TRINITY_DN45519_c0_g1_i3","BAM3_ARATH^BAM3_ARATH^Q:2252-816,H:70-548^77.66%ID^E:0^RecName: Full=Beta-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45519_c0_g1_i3.p1","813-2294[-]","BAM3_ARATH^BAM3_ARATH^Q:15-493,H:70-548^77.66%ID^E:0^RecName: Full=Beta-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01373.14^Glyco_hydro_14^Glycosyl hydrolase family 14^34-451^E:4.4e-168",".",".","ENOG410XRH5^beta-amylase","KEGG:ath:AT4G17090`KO:K01177","GO:0009570^cellular_component^chloroplast stroma`GO:0016161^molecular_function^beta-amylase activity`GO:0000024^biological_process^maltose biosynthetic process`GO:0009409^biological_process^response to cold`GO:0005983^biological_process^starch catabolic process","GO:0016161^molecular_function^beta-amylase activity`GO:0000272^biological_process^polysaccharide catabolic process",".","."]
["TRINITY_DN45444_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.13240299265165,0,0,"TRINITY_DN45444_c0_g1_i2","LPA3_ARATH^LPA3_ARATH^Q:1127-486,H:145-358^77.57%ID^E:1e-104^RecName: Full=Protein LOW PSII ACCUMULATION 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LPA3_ARATH^LPA3_ARATH^Q:2118-1786,H:35-145^70.27%ID^E:4e-36^RecName: Full=Protein LOW PSII ACCUMULATION 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45444_c0_g1_i2.p1","483-1163[-]","LPA3_ARATH^LPA3_ARATH^Q:13-226,H:145-358^77.57%ID^E:4e-123^RecName: Full=Protein LOW PSII ACCUMULATION 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF09353.7^DUF1995^Domain of unknown function (DUF1995)^59-182^E:6.5e-33",".",".","ENOG410XSNM^Domain of unknown function (DUF1995)","KEGG:ath:AT1G73060","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009571^cellular_component^proplastid stroma`GO:0010207^biological_process^photosystem II assembly`GO:0009735^biological_process^response to cytokinin",".",".","."]
["TRINITY_DN46859_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",6.07564780207901,0,0,"TRINITY_DN46859_c4_g1_i29","CATA1_GOSHI^CATA1_GOSHI^Q:2998-1586,H:1-471^92.36%ID^E:0^RecName: Full=Catalase isozyme 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium",".","TRINITY_DN46859_c4_g1_i29.p1","1487-2998[-]","CATA1_GOSHI^CATA1_GOSHI^Q:1-471,H:1-471^92.36%ID^E:0^RecName: Full=Catalase isozyme 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium","PF00199.16^Catalase^Catalase^18-398^E:3.4e-173`PF06628.9^Catalase-rel^Catalase-related immune-responsive^423-472^E:9.4e-11",".",".",".",".","GO:0005777^cellular_component^peroxisome`GO:0004096^molecular_function^catalase activity`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004096^molecular_function^catalase activity`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44274_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",6.07436011240844,0,0,"TRINITY_DN44274_c2_g2_i2","PPA1_SOLLC^PPA1_SOLLC^Q:890-243,H:40-254^44.29%ID^E:5e-49^RecName: Full=Acid phosphatase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44274_c2_g2_i2.p1","237-1055[-]","PPA1_SOLLC^PPA1_SOLLC^Q:56-271,H:40-254^44.75%ID^E:2e-56^RecName: Full=Acid phosphatase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF03767.11^Acid_phosphat_B^HAD superfamily, subfamily IIIB (Acid phosphatase)^53-271^E:1.8e-48","sigP:1^31^0.818^YES",".","ENOG410YBHH^Acid phosphatase",".","GO:0003993^molecular_function^acid phosphatase activity",".",".","."]
["TRINITY_DN38444_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",6.04545258234132,0,0,"TRINITY_DN38444_c0_g1_i4","STN8_ARATH^STN8_ARATH^Q:178-1272,H:1-387^63.24%ID^E:5e-142^RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`STN8_ARATH^STN8_ARATH^Q:1292-1654,H:373-493^79.34%ID^E:5e-53^RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38444_c0_g1_i4.p1","112-1269[+]","STN8_ARATH^STN8_ARATH^Q:23-385,H:1-385^63.31%ID^E:6e-158^RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^138-355^E:4.1e-09`PF00069.22^Pkinase^Protein kinase domain^262-355^E:2.1e-18",".",".","ENOG410XPP3^Cyclin-Dependent Kinase","KEGG:ath:AT5G01920","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009579^cellular_component^thylakoid`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0042549^biological_process^photosystem II stabilization","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46983_c2_g5","leaves S. abrotanoides","roots S. abrotanoides",5.99171285061889,0,0,"TRINITY_DN46983_c2_g5_i1","LSF2_ARATH^LSF2_ARATH^Q:1040-288,H:24-282^71.43%ID^E:2e-133^RecName: Full=Phosphoglucan phosphatase LSF2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46983_c2_g5_i1.p1","285-1118[-]","LSF2_ARATH^LSF2_ARATH^Q:27-277,H:24-282^71.43%ID^E:1e-135^RecName: Full=Phosphoglucan phosphatase LSF2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00782.17^DSPc^Dual specificity phosphatase, catalytic domain^108-225^E:1e-13",".",".","COG2453^dual specificity phosphatase","KEGG:ath:AT3G10940","GO:0009507^cellular_component^chloroplast`GO:0019203^molecular_function^carbohydrate phosphatase activity`GO:0008138^molecular_function^protein tyrosine/serine/threonine phosphatase activity`GO:2001070^molecular_function^starch binding`GO:0050308^molecular_function^sugar-phosphatase activity`GO:0046838^biological_process^phosphorylated carbohydrate dephosphorylation`GO:0005983^biological_process^starch catabolic process","GO:0008138^molecular_function^protein tyrosine/serine/threonine phosphatase activity`GO:0006470^biological_process^protein dephosphorylation",".","."]
["TRINITY_DN43985_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",5.97301619735886,0,0,"TRINITY_DN43985_c2_g3_i3","NES2_FRAAN^NES2_FRAAN^Q:346-1842,H:74-569^46.83%ID^E:8e-152^RecName: Full=(3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".","TRINITY_DN43985_c2_g3_i3.p1","331-1887[+]","NES2_FRAAN^NES2_FRAAN^Q:6-504,H:74-569^46.83%ID^E:2e-154^RecName: Full=(3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^4-159^E:6.2e-33`PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^191-456^E:2.5e-72",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN35414_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.930763869356,0,0,"TRINITY_DN35414_c0_g1_i3","TRXX_ARATH^TRXX_ARATH^Q:267-614,H:65-177^67.24%ID^E:2e-49^RecName: Full=Thioredoxin X, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35414_c0_g1_i3.p1","102-632[+]","TRXX_ARATH^TRXX_ARATH^Q:13-175,H:18-181^55.95%ID^E:4e-58^RecName: Full=Thioredoxin X, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^65-168^E:3.8e-28`PF00578.18^AhpC-TSA^AhpC/TSA family^72-143^E:0.00013`PF13098.3^Thioredoxin_2^Thioredoxin-like domain^83-165^E:1.9e-06",".",".","COG0526^Thioredoxin","KEGG:ath:AT1G50320","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0008047^molecular_function^enzyme activator activity`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0055114^biological_process^oxidation-reduction process`GO:0043085^biological_process^positive regulation of catalytic activity`GO:0006457^biological_process^protein folding`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis`GO:0016209^molecular_function^antioxidant activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44226_c6_g5","leaves S. abrotanoides","roots S. abrotanoides",5.91535191045478,0,0,"TRINITY_DN44226_c6_g5_i1","ALFC_SPIOL^ALFC_SPIOL^Q:600-1,H:1-195^82.5%ID^E:1e-107^RecName: Full=Fructose-bisphosphate aldolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN44226_c6_g5_i1.p1","1-600[-]","ALFC_SPIOL^ALFC_SPIOL^Q:1-200,H:1-195^82.5%ID^E:1e-110^RecName: Full=Fructose-bisphosphate aldolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00274.16^Glycolytic^Fructose-bisphosphate aldolase class-I^57-197^E:1.8e-62",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process","GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN46835_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",5.91099276371203,0,0,"TRINITY_DN46835_c1_g5_i3","PSAF_FLATR^PSAF_FLATR^Q:1531-1223,H:130-232^92.23%ID^E:9e-61^RecName: Full=Photosystem I reaction center subunit III, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Tageteae; Flaveria`PSAF_FLATR^PSAF_FLATR^Q:1782-1543,H:72-158^65.91%ID^E:4e-26^RecName: Full=Photosystem I reaction center subunit III, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Tageteae; Flaveria",".","TRINITY_DN46835_c1_g5_i3.p2","1603-1980[-]","PSAF_ARATH^PSAF_ARATH^Q:1-125,H:1-119^63.78%ID^E:2e-39^RecName: Full=Photosystem I reaction center subunit III, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02507.12^PSI_PsaF^Photosystem I reaction centre subunit III^63-125^E:3.3e-20",".",".","ENOG4111JQH^photosystem i","KEGG:ath:AT1G31330`KO:K02694","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN46788_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",5.90741721643553,0,0,"TRINITY_DN46788_c0_g2_i1","CAX3_ARATH^CAX3_ARATH^Q:205-1488,H:1-438^71.92%ID^E:9e-169^RecName: Full=Vacuolar cation/proton exchanger 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46788_c0_g2_i1.p1","184-1539[+]","CAX1_ARATH^CAX1_ARATH^Q:20-439,H:13-440^71.5%ID^E:0^RecName: Full=Vacuolar cation/proton exchanger 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^99-256^E:9.9e-24`PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^287-430^E:1.1e-17",".",".","COG0387^Calcium Proton","KEGG:ath:AT2G38170`KO:K07300","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0015369^molecular_function^calcium:proton antiporter activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0030026^biological_process^cellular manganese ion homeostasis`GO:0006882^biological_process^cellular zinc ion homeostasis`GO:0009631^biological_process^cold acclimation`GO:0055062^biological_process^phosphate ion homeostasis`GO:0009651^biological_process^response to salt stress","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44226_c6_g6","leaves S. abrotanoides","roots S. abrotanoides",5.90728462713038,0,0,"TRINITY_DN44226_c6_g6_i2","ALFC2_ARATH^ALFC2_ARATH^Q:2-628,H:190-398^89.95%ID^E:5e-136^RecName: Full=Probable fructose-bisphosphate aldolase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44226_c6_g6_i2.p1","2-631[+]","ALFC2_ARATH^ALFC2_ARATH^Q:1-209,H:190-398^89.95%ID^E:3e-136^RecName: Full=Probable fructose-bisphosphate aldolase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00274.16^Glycolytic^Fructose-bisphosphate aldolase class-I^5-209^E:8.7e-90",".",".","COG3588^fructose-bisphosphate aldolase","KEGG:ath:AT4G38970`KO:K01623","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process`GO:0009737^biological_process^response to abscisic acid`GO:0046686^biological_process^response to cadmium ion","GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN44758_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",5.85868018706111,0,0,"TRINITY_DN44758_c4_g3_i5","STR4_ARATH^STR4_ARATH^Q:160-1293,H:1-357^56.74%ID^E:5e-111^RecName: Full=Rhodanese-like domain-containing protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44758_c4_g3_i5.p1","160-1128[+]","STR4_ARATH^STR4_ARATH^Q:1-318,H:1-323^61.66%ID^E:4e-117^RecName: Full=Rhodanese-like domain-containing protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111G9P^NA","KEGG:ath:AT4G01050","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005576^cellular_component^extracellular region`GO:0016021^cellular_component^integral component of membrane`GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0042742^biological_process^defense response to bacterium`GO:0009772^biological_process^photosynthetic electron transport in photosystem II",".",".","."]
["TRINITY_DN45198_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",5.85404360651174,0,0,"TRINITY_DN45198_c3_g1_i3","FTSH_TOBAC^FTSH_TOBAC^Q:2255-552,H:1-577^84.78%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45198_c3_g1_i3.p1","510-2267[-]","FTSH_TOBAC^FTSH_TOBAC^Q:5-572,H:1-577^86.51%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^285-416^E:2.5e-44`PF01434.15^Peptidase_M41^Peptidase family M41^478-572^E:8.3e-35",".",".",".",".","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division","GO:0005524^molecular_function^ATP binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN45715_c3_g5","leaves S. abrotanoides","roots S. abrotanoides",5.84193530154244,0,0,"TRINITY_DN45715_c3_g5_i8","PGL1A_ARATH^PGL1A_ARATH^Q:2334-2741,H:189-324^78.68%ID^E:4e-46^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PGL1A_ARATH^PGL1A_ARATH^Q:679-885,H:103-171^86.96%ID^E:4e-30^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PGL1A_ARATH^PGL1A_ARATH^Q:181-489,H:1-104^49.52%ID^E:6e-17^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45715_c3_g5_i8.p1","1-525[+]","PGL1A_ARATH^PGL1A_ARATH^Q:61-163,H:1-104^47.79%ID^E:7e-19^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4110C1Q^PGR5-like protein 1A","KEGG:ath:AT4G22890","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009579^cellular_component^thylakoid`GO:0042802^molecular_function^identical protein binding`GO:0016730^molecular_function^oxidoreductase activity, acting on iron-sulfur proteins as donors`GO:0015979^biological_process^photosynthesis`GO:0009773^biological_process^photosynthetic electron transport in photosystem I",".",".","."]
["TRINITY_DN42323_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.79737423207208,0,0,"TRINITY_DN42323_c0_g1_i3","P2C57_ARATH^P2C57_ARATH^Q:124-924,H:1-265^59.33%ID^E:1e-97^RecName: Full=Protein phosphatase 2C 57;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42323_c0_g1_i3.p1","124-927[+]","P2C57_ARATH^P2C57_ARATH^Q:1-267,H:1-265^59.33%ID^E:2e-108^RecName: Full=Protein phosphatase 2C 57;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00481.18^PP2C^Protein phosphatase 2C^62-248^E:1.9e-33",".",".","COG0631^Phosphatase","KEGG:ath:AT4G27800","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005737^cellular_component^cytoplasm`GO:0016021^cellular_component^integral component of membrane`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0009579^cellular_component^thylakoid`GO:0046872^molecular_function^metal ion binding`GO:0016791^molecular_function^phosphatase activity`GO:0004721^molecular_function^phosphoprotein phosphatase activity`GO:0016311^biological_process^dephosphorylation`GO:0009767^biological_process^photosynthetic electron transport chain`GO:0080005^biological_process^photosystem stoichiometry adjustment","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN47475_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",5.79656330661113,0,0,"TRINITY_DN47475_c3_g1_i4","EFGC1_SOYBN^EFGC1_SOYBN^Q:2236-206,H:54-733^87.65%ID^E:0^RecName: Full=Elongation factor G-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN47475_c3_g1_i4.p1","107-2392[-]","EFGC1_SOYBN^EFGC1_SOYBN^Q:1-729,H:1-733^83.97%ID^E:0^RecName: Full=Elongation factor G-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00009.24^GTP_EFTU^Elongation factor Tu GTP binding domain^95-367^E:2.3e-70`PF03144.22^GTP_EFTU_D2^Elongation factor Tu domain 2^410-477^E:8.5e-15`PF14492.3^EFG_II^Elongation Factor G, domain II^490-563^E:9.5e-33`PF03764.15^EFG_IV^Elongation factor G, domain IV^565-683^E:4.7e-45`PF00679.21^EFG_C^Elongation factor G C-terminus^687-723^E:2.5e-09",".",".","COG0480^Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)","KEGG:gmx:100797377`KO:K02355","GO:0009507^cellular_component^chloroplast`GO:0005622^cellular_component^intracellular`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003746^molecular_function^translation elongation factor activity`GO:0032790^biological_process^ribosome disassembly","GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN46723_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",5.76587628391446,0,0,"TRINITY_DN46723_c1_g1_i5","C71A8_MENPI^C71A8_MENPI^Q:1715-231,H:11-501^73.64%ID^E:0^RecName: Full=Cytochrome P450 71A8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN46723_c1_g1_i5.p1","222-1709[-]","C71A8_MENPI^C71A8_MENPI^Q:1-493,H:13-501^75.56%ID^E:0^RecName: Full=Cytochrome P450 71A8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF00067.19^p450^Cytochrome P450^37-481^E:2.1e-105",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44976_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",5.74958662236263,0,0,"TRINITY_DN44976_c2_g1_i4","NLTP1_TOBAC^NLTP1_TOBAC^Q:465-202,H:27-114^68.18%ID^E:8e-23^RecName: Full=Non-specific lipid-transfer protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44976_c2_g1_i4.p1","199-555[-]","NLTP2_SOLPN^NLTP2_SOLPN^Q:5-118,H:1-114^57.02%ID^E:4e-41^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF14368.3^LTP_2^Probable lipid transfer^14-106^E:1e-05`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^31-114^E:4.5e-08","sigP:1^27^0.816^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN43983_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",5.72204329299584,"0.0122990744520289","0.0165594235283659","TRINITY_DN43983_c1_g1_i1","Y1341_ARATH^Y1341_ARATH^Q:330-13,H:289-386^44.86%ID^E:5e-15^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:342-46,H:333-424^44.44%ID^E:2e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:339-37,H:382-475^40.59%ID^E:9e-08^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:339-34,H:238-332^38.24%ID^E:6e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:339-31,H:214-309^34.95%ID^E:4e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:369-13,H:132-266^31.39%ID^E:8e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43983_c1_g1_i1.p1","1-369[-]","Y1341_ARATH^Y1341_ARATH^Q:14-119,H:289-386^44.86%ID^E:5e-15^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:10-108,H:333-424^44.44%ID^E:2e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:11-111,H:382-475^40.59%ID^E:8e-08^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:11-112,H:238-332^38.24%ID^E:5e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:11-113,H:214-309^34.95%ID^E:4e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1341_ARATH^Y1341_ARATH^Q:1-119,H:132-266^31.39%ID^E:7e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g34110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^11-69^E:1.1e-07`PF00560.30^LRR_1^Leucine Rich Repeat^11-32^E:0.49",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G34110","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN38592_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.62839658268978,0,0,"TRINITY_DN38592_c0_g1_i1","PGKH_TOBAC^PGKH_TOBAC^Q:1705-296,H:1-474^87.34%ID^E:0^RecName: Full=Phosphoglycerate kinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN38592_c0_g1_i1.p1","275-1705[-]","PGKH_TOBAC^PGKH_TOBAC^Q:1-476,H:1-481^87.11%ID^E:0^RecName: Full=Phosphoglycerate kinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00162.16^PGK^Phosphoglycerate kinase^82-460^E:4.6e-161",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0004618^molecular_function^phosphoglycerate kinase activity`GO:0006096^biological_process^glycolytic process`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0004618^molecular_function^phosphoglycerate kinase activity`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN43603_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",5.57743661517282,0,0,"TRINITY_DN43603_c1_g3_i2","Y5576_ARATH^Y5576_ARATH^Q:118-1896,H:11-576^48.84%ID^E:0^RecName: Full=Probable receptor-like serine/threonine-protein kinase At5g57670;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43603_c1_g3_i2.p1","235-1917[+]","Y5576_ARATH^Y5576_ARATH^Q:11-554,H:59-576^49.82%ID^E:0^RecName: Full=Probable receptor-like serine/threonine-protein kinase At5g57670;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10578.6^SVS_QK^Seminal vesicle protein repeat^13-23^E:14`PF00069.22^Pkinase^Protein kinase domain^251-514^E:3.7e-42`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^254-514^E:3.5e-40",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G57670","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47583_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",5.52472857507189,0,0,"TRINITY_DN47583_c2_g3_i2","Y2766_ARATH^Y2766_ARATH^Q:391-1047,H:105-318^28.99%ID^E:3e-15^RecName: Full=Uncharacterized protein At2g37660, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47583_c2_g3_i2.p1","61-1065[+]","Y2766_ARATH^Y2766_ARATH^Q:87-329,H:79-318^29.92%ID^E:1e-19^RecName: Full=Uncharacterized protein At2g37660, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05368.10^NmrA^NmrA-like family^87-264^E:1.4e-07`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^87-207^E:3.2e-06`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^88-211^E:4.6e-05`PF13460.3^NAD_binding_10^NAD(P)H-binding^91-299^E:4.6e-32",".",".","COG0702^epimerase dehydratase","KEGG:ath:AT2G37660","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009579^cellular_component^thylakoid`GO:0005507^molecular_function^copper ion binding`GO:0042742^biological_process^defense response to bacterium","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44286_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",5.48714295526002,0,0,"TRINITY_DN44286_c1_g2_i3","FTRC1_SPIOL^FTRC1_SPIOL^Q:1342-938,H:1-131^70.37%ID^E:2e-61^RecName: Full=Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN44286_c1_g2_i3.p1","917-1342[-]","FTRC1_SPIOL^FTRC1_SPIOL^Q:1-135,H:1-131^76.3%ID^E:2e-70^RecName: Full=Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF02943.12^FeThRed_B^Ferredoxin thioredoxin reductase catalytic beta chain^43-136^E:1.1e-38",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0030385^molecular_function^ferredoxin:thioredoxin reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process","GO:0016730^molecular_function^oxidoreductase activity, acting on iron-sulfur proteins as donors`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44751_c8_g2","leaves S. abrotanoides","roots S. abrotanoides",5.48356719869624,0,0,"TRINITY_DN44751_c8_g2_i8","DFRA_DIACA^DFRA_DIACA^Q:1438-1211,H:21-103^38.55%ID^E:2e-06^RecName: Full=Dihydroflavonol-4-reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Dianthus",".","TRINITY_DN44751_c8_g2_i8.p1","593-1906[-]","DFRA_DIACA^DFRA_DIACA^Q:157-232,H:21-103^38.55%ID^E:7e-07^RecName: Full=Dihydroflavonol-4-reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Dianthus","PF05368.10^NmrA^NmrA-like family^161-232^E:5e-10`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^161-260^E:2.1e-05`PF13460.3^NAD_binding_10^NAD(P)H-binding^165-241^E:1.3e-11`PF08547.9^CIA30^Complex I intermediate-associated protein 30 (CIA30)^306-435^E:2.1e-08",".",".",".",".","GO:0050662^molecular_function^coenzyme binding`GO:0045552^molecular_function^dihydrokaempferol 4-reductase activity`GO:0009718^biological_process^anthocyanin-containing compound biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding",".","."]
["TRINITY_DN44470_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",5.468905766551,0,0,"TRINITY_DN44470_c3_g2_i3","RK1_SPIOL^RK1_SPIOL^Q:326-733,H:103-238^86.03%ID^E:5e-72^RecName: Full=50S ribosomal protein L1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia`RK1_SPIOL^RK1_SPIOL^Q:1075-1404,H:238-347^76.36%ID^E:2e-53^RecName: Full=50S ribosomal protein L1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN44470_c3_g2_i3.p1","26-769[+]","RK1_ARATH^RK1_ARATH^Q:21-236,H:15-232^64.25%ID^E:6e-81^RecName: Full=50S ribosomal protein L1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00687.18^Ribosomal_L1^Ribosomal protein L1p/L10e family^143-236^E:2.6e-19",".",".","COG0081^Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (By similarity)","KEGG:ath:AT3G63490`KO:K02863","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0015934^cellular_component^large ribosomal subunit`GO:0016020^cellular_component^membrane`GO:0005634^cellular_component^nucleus`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN43726_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",5.45509292286397,0,0,"TRINITY_DN43726_c0_g2_i1","ABA2_NICPL^ABA2_NICPL^Q:1493-12,H:1-500^77.73%ID^E:0^RecName: Full=Zeaxanthin epoxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43726_c0_g2_i1.p1","3-1493[-]","ABA2_NICPL^ABA2_NICPL^Q:1-494,H:1-500^77.73%ID^E:0^RecName: Full=Zeaxanthin epoxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01494.16^FAD_binding_3^FAD binding domain^75-246^E:1.8e-06`PF01494.16^FAD_binding_3^FAD binding domain^356-396^E:2e-06",".",".",".",".","GO:0031969^cellular_component^chloroplast membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0052663^molecular_function^antheraxanthin epoxidase activity`GO:0071949^molecular_function^FAD binding`GO:0009540^molecular_function^zeaxanthin epoxidase [overall] activity`GO:0052662^molecular_function^zeaxanthin epoxidase activity`GO:0009688^biological_process^abscisic acid biosynthetic process","GO:0071949^molecular_function^FAD binding",".","."]
["TRINITY_DN42676_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.43834614698708,0,0,"TRINITY_DN42676_c0_g1_i6","Y2104_ARATH^Y2104_ARATH^Q:1198-2124,H:72-352^64.19%ID^E:3e-137^RecName: Full=Uncharacterized methyltransferase At2g41040, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42676_c0_g1_i6.p1","1429-2127[+]","Y2104_ARATH^Y2104_ARATH^Q:2-232,H:121-352^71.98%ID^E:4e-122^RecName: Full=Uncharacterized methyltransferase At2g41040, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01209.15^Ubie_methyltran^ubiE/COQ5 methyltransferase family^62-177^E:8.4e-11`PF13489.3^Methyltransf_23^Methyltransferase domain^63-217^E:4.6e-12`PF13847.3^Methyltransf_31^Methyltransferase domain^67-175^E:1e-09`PF08241.9^Methyltransf_11^Methyltransferase domain^70-170^E:3.7e-20`PF13649.3^Methyltransf_25^Methyltransferase domain^70-167^E:4.9e-16`PF08242.9^Methyltransf_12^Methyltransferase domain^70-169^E:6.2e-08",".",".","COG2226^Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2)","KEGG:ath:AT2G41040","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0008168^molecular_function^methyltransferase activity`GO:0080167^biological_process^response to karrikin","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45113_c4_g4","leaves S. abrotanoides","roots S. abrotanoides",5.42326403256195,0,0,"TRINITY_DN45113_c4_g4_i1","14KD_DAUCA^14KD_DAUCA^Q:585-827,H:56-136^72.84%ID^E:9e-27^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45113_c4_g4_i1.p1","408-833[+]","14KD_DAUCA^14KD_DAUCA^Q:1-140,H:1-136^61.43%ID^E:1e-42^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF14547.3^Hydrophob_seed^Hydrophobic seed protein^57-141^E:1.1e-29`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^58-140^E:2.7e-08","sigP:1^25^0.89^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN46616_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",5.41034946142247,0,0,"TRINITY_DN46616_c1_g3_i1","GAUT6_ARATH^GAUT6_ARATH^Q:1144-2286,H:209-589^60.89%ID^E:1e-168^RecName: Full=Probable galacturonosyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GAUT6_ARATH^GAUT6_ARATH^Q:926-1141,H:134-204^45.83%ID^E:7e-10^RecName: Full=Probable galacturonosyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GAUT6_ARATH^GAUT6_ARATH^Q:312-497,H:1-62^51.61%ID^E:2e-07^RecName: Full=Probable galacturonosyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GAUT6_ARATH^GAUT6_ARATH^Q:599-646,H:64-79^50%ID^E:2e-07^RecName: Full=Probable galacturonosyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46616_c1_g3_i1.p1","1147-2289[+]","GAUT6_ARATH^GAUT6_ARATH^Q:1-380,H:210-589^61.05%ID^E:7e-176^RecName: Full=Probable galacturonosyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01501.17^Glyco_transf_8^Glycosyl transferase family 8^60-353^E:1.4e-72",".",".","ENOG410YA0P^Galacturonosyltransferase",".","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0047262^molecular_function^polygalacturonate 4-alpha-galacturonosyltransferase activity`GO:0071555^biological_process^cell wall organization`GO:0045489^biological_process^pectin biosynthetic process","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN45878_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",5.39938280250968,0,0,"TRINITY_DN45878_c4_g2_i6","TPPJ_ARATH^TPPJ_ARATH^Q:452-1192,H:1-249^66.67%ID^E:2e-107^RecName: Full=Probable trehalose-phosphate phosphatase J;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45878_c4_g2_i6.p1","452-1222[+]","TPPJ_ARATH^TPPJ_ARATH^Q:1-247,H:1-249^66.67%ID^E:6e-110^RecName: Full=Probable trehalose-phosphate phosphatase J;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02358.13^Trehalose_PPase^Trehalose-phosphatase^118-248^E:2.7e-40",".",".","COG1877^trehalose biosynthetic process",".","GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0004805^molecular_function^trehalose-phosphatase activity`GO:0046686^biological_process^response to cadmium ion`GO:0005992^biological_process^trehalose biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0005992^biological_process^trehalose biosynthetic process",".","."]
["TRINITY_DN47128_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",5.39024192564075,0,0,"TRINITY_DN47128_c1_g1_i16","P2B15_ARATH^P2B15_ARATH^Q:630-163,H:71-249^35.2%ID^E:1e-28^RecName: Full=F-box protein PP2-B15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47128_c1_g1_i16.p1","55-552[-]","P2B15_ARATH^P2B15_ARATH^Q:1-161,H:97-284^38.3%ID^E:3e-36^RecName: Full=F-box protein PP2-B15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14299.3^PP2^Phloem protein 2^1-156^E:3.4e-41",".",".","ENOG4111AE6^F-box protein","KEGG:ath:AT1G09155","GO:0030246^molecular_function^carbohydrate binding",".",".","."]
["TRINITY_DN46223_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",5.38947086507617,0,0,"TRINITY_DN46223_c1_g1_i1","PNSB4_ARATH^PNSB4_ARATH^Q:125-649,H:1-175^60.77%ID^E:8e-38^RecName: Full=Photosynthetic NDH subunit of subcomplex B 4, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46223_c1_g1_i1.p1","125-652[+]","PNSB4_ARATH^PNSB4_ARATH^Q:1-175,H:1-175^60.75%ID^E:5e-68^RecName: Full=Photosynthetic NDH subunit of subcomplex B 4, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YHJ2^NA",".","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010598^cellular_component^NAD(P)H dehydrogenase complex (plastoquinone)`GO:0009773^biological_process^photosynthetic electron transport in photosystem I`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN45200_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",5.37819092870641,{"v":7848675545.10846,"d":"7.85E+09"},"0.00012661734561783","TRINITY_DN45200_c2_g4_i3","GGPPS_CATRO^GGPPS_CATRO^Q:1039-161,H:65-357^76.79%ID^E:2e-165^RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus",".","TRINITY_DN45200_c2_g4_i3.p1","158-1228[-]","GGPPS_CATRO^GGPPS_CATRO^Q:64-356,H:65-357^76.79%ID^E:3e-167^RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF00348.14^polyprenyl_synt^Polyprenyl synthetase^91-330^E:9.4e-58",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004161^molecular_function^dimethylallyltranstransferase activity`GO:0004311^molecular_function^farnesyltranstransferase activity`GO:0004337^molecular_function^geranyltranstransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0045337^biological_process^farnesyl diphosphate biosynthetic process`GO:0033384^biological_process^geranyl diphosphate biosynthetic process`GO:0033386^biological_process^geranylgeranyl diphosphate biosynthetic process","GO:0008299^biological_process^isoprenoid biosynthetic process",".","."]
["TRINITY_DN46952_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",5.3729419643136,0,0,"TRINITY_DN46952_c1_g1_i3","PLT5_ARATH^PLT5_ARATH^Q:1811-306,H:22-515^68.39%ID^E:0^RecName: Full=Polyol transporter 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46952_c1_g1_i3.p1","294-1853[-]","PLT5_ARATH^PLT5_ARATH^Q:15-516,H:22-515^68.39%ID^E:0^RecName: Full=Polyol transporter 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^33-491^E:6.3e-111`PF07690.13^MFS_1^Major Facilitator Superfamily^39-437^E:2.9e-27",".",".","ENOG410XNQK^Transporter","KEGG:ath:AT3G18830","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0015591^molecular_function^D-ribose transmembrane transporter activity`GO:0015148^molecular_function^D-xylose transmembrane transporter activity`GO:0005354^molecular_function^galactose transmembrane transporter activity`GO:0005355^molecular_function^glucose transmembrane transporter activity`GO:0015168^molecular_function^glycerol transmembrane transporter activity`GO:0015575^molecular_function^mannitol transmembrane transporter activity`GO:0015145^molecular_function^monosaccharide transmembrane transporter activity`GO:0005365^molecular_function^myo-inositol transmembrane transporter activity`GO:0015576^molecular_function^sorbitol transmembrane transporter activity`GO:0005351^molecular_function^sugar:proton symporter activity`GO:0015752^biological_process^D-ribose transport`GO:0015753^biological_process^D-xylose transport`GO:0015757^biological_process^galactose transport`GO:0046323^biological_process^glucose import`GO:1904659^biological_process^glucose transmembrane transport`GO:0015793^biological_process^glycerol transport`GO:0010311^biological_process^lateral root formation`GO:0015797^biological_process^mannitol transport`GO:0015798^biological_process^myo-inositol transport`GO:0015992^biological_process^proton transport`GO:0015795^biological_process^sorbitol transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44384_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",5.36973912057808,0,0,"TRINITY_DN44384_c4_g2_i1","FTSH6_ARATH^FTSH6_ARATH^Q:157-1845,H:7-578^70.24%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44384_c4_g2_i1.p1","154-1851[+]","FTSH6_ARATH^FTSH6_ARATH^Q:2-564,H:7-578^71.28%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06480.12^FtsH_ext^FtsH Extracellular^74-144^E:1.1e-05`PF07728.11^AAA_5^AAA domain (dynein-related subfamily)^245-365^E:6.7e-05`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^246-378^E:1.4e-45`PF01434.15^Peptidase_M41^Peptidase family M41^440-558^E:1.6e-44",".",".","COG0465^Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008270^molecular_function^zinc ion binding","GO:0004222^molecular_function^metalloendopeptidase activity`GO:0005524^molecular_function^ATP binding`GO:0008270^molecular_function^zinc ion binding`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46002_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",5.31431992205194,0,0,"TRINITY_DN46002_c2_g1_i13","GLGL1_ARATH^GLGL1_ARATH^Q:206-925,H:1-202^56.79%ID^E:2e-73^RecName: Full=Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLGL1_ARATH^GLGL1_ARATH^Q:1084-1170,H:202-230^86.21%ID^E:2e-15^RecName: Full=Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLGL1_ARATH^GLGL1_ARATH^Q:1257-1388,H:228-272^48.89%ID^E:2e-15^RecName: Full=Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLGL1_ARATH^GLGL1_ARATH^Q:1669-1794,H:241-282^66.67%ID^E:2e-09^RecName: Full=Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46002_c2_g1_i13.p1","206-778[+]","GLGL3_SOLTU^GLGL3_SOLTU^Q:40-172,H:1-132^76.87%ID^E:3e-63^RecName: Full=Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00483.20^NTP_transferase^Nucleotidyl transferase^91-172^E:2.1e-24",".",".","COG0448^Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (By similarity)","KEGG:sot:102582750`KO:K00975","GO:0009501^cellular_component^amyloplast`GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0008878^molecular_function^glucose-1-phosphate adenylyltransferase activity`GO:0005978^biological_process^glycogen biosynthetic process`GO:0019252^biological_process^starch biosynthetic process","GO:0016779^molecular_function^nucleotidyltransferase activity`GO:0009058^biological_process^biosynthetic process",".","."]
["TRINITY_DN46991_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",5.27807383516744,0,0,"TRINITY_DN46991_c2_g4_i2","C7A29_PANGI^C7A29_PANGI^Q:218-904,H:1-229^54.35%ID^E:1e-81^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN46991_c2_g4_i2.p1","218-904[+]","C7A29_PANGI^C7A29_PANGI^Q:1-229,H:1-229^54.35%ID^E:1e-82^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^81-219^E:1.8e-16",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46811_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",5.27512125141021,0,0,"TRINITY_DN46811_c1_g3_i2","CAS_ARATH^CAS_ARATH^Q:1104-412,H:154-384^74.03%ID^E:2e-121^RecName: Full=Calcium sensing receptor, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CAS_ARATH^CAS_ARATH^Q:1430-1128,H:53-154^56.86%ID^E:2e-121^RecName: Full=Calcium sensing receptor, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46811_c1_g3_i2.p2","1065-1691[-]","CAS_ARATH^CAS_ARATH^Q:68-188,H:32-154^53.66%ID^E:8e-34^RecName: Full=Calcium sensing receptor, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111GSH^Calcium sensing receptor","KEGG:ath:AT5G23060","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005739^cellular_component^mitochondrion`GO:0009579^cellular_component^thylakoid`GO:0071277^biological_process^cellular response to calcium ion`GO:0009704^biological_process^de-etiolation`GO:0090333^biological_process^regulation of stomatal closure",".",".","."]
["TRINITY_DN41152_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",5.26686760531668,0,0,"TRINITY_DN41152_c0_g2_i2","SPS2_ARATH^SPS2_ARATH^Q:1598-351,H:4-416^68.11%ID^E:0^RecName: Full=Solanesyl diphosphate synthase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41152_c0_g2_i2.p1","345-1610[-]","SPS2_ARATH^SPS2_ARATH^Q:2-420,H:1-416^67.86%ID^E:0^RecName: Full=Solanesyl diphosphate synthase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00348.14^polyprenyl_synt^Polyprenyl synthetase^127-372^E:1.9e-73",".",".","COG0142^synthase","KEGG:ath:AT1G17050`KO:K05356","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0052924^molecular_function^all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity`GO:0046872^molecular_function^metal ion binding`GO:0050347^molecular_function^trans-octaprenyltranstransferase activity`GO:0008299^biological_process^isoprenoid biosynthetic process`GO:0015979^biological_process^photosynthesis`GO:0010236^biological_process^plastoquinone biosynthetic process","GO:0008299^biological_process^isoprenoid biosynthetic process",".","."]
["TRINITY_DN45124_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",5.25858220037819,0,0,"TRINITY_DN45124_c2_g1_i4","GLNA2_DAUCA^GLNA2_DAUCA^Q:170-1573,H:1-432^82.26%ID^E:0^RecName: Full=Glutamine synthetase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45124_c2_g1_i4.p1","1037-1576[+]","GLNA2_DAUCA^GLNA2_DAUCA^Q:1-179,H:254-432^95.53%ID^E:6e-122^RecName: Full=Glutamine synthetase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF00120.21^Gln-synt_C^Glutamine synthetase, catalytic domain^2-63^E:1.9e-07",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0004356^molecular_function^glutamate-ammonia ligase activity`GO:0006542^biological_process^glutamine biosynthetic process","GO:0004356^molecular_function^glutamate-ammonia ligase activity`GO:0006807^biological_process^nitrogen compound metabolic process",".","."]
["TRINITY_DN45422_c3_g16","leaves S. abrotanoides","roots S. abrotanoides",5.24045641799388,0,0,"TRINITY_DN45422_c3_g16_i2","TIP13_ARATH^TIP13_ARATH^Q:1005-250,H:1-252^75.79%ID^E:4e-126^RecName: Full=Aquaporin TIP1-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45422_c3_g16_i2.p1","247-1005[-]","TIP13_ARATH^TIP13_ARATH^Q:1-252,H:1-252^75.79%ID^E:4e-139^RecName: Full=Aquaporin TIP1-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^16-234^E:6.6e-75",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT4G01470`KO:K09873","GO:0042807^cellular_component^central vacuole`GO:0016021^cellular_component^integral component of membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0015254^molecular_function^glycerol channel activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0034220^biological_process^ion transmembrane transport`GO:0071918^biological_process^urea transmembrane transport`GO:0015840^biological_process^urea transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN9455_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.21224285511902,0,0,"TRINITY_DN9455_c0_g1_i1","RK5_ARATH^RK5_ARATH^Q:1020-268,H:3-255^67.82%ID^E:9e-123^RecName: Full=50S ribosomal protein L5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN9455_c0_g1_i1.p1","223-1029[-]","RK5_ARATH^RK5_ARATH^Q:4-260,H:3-261^67.04%ID^E:3e-126^RecName: Full=50S ribosomal protein L5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00281.16^Ribosomal_L5^Ribosomal protein L5^77-133^E:1.9e-26`PF00673.18^Ribosomal_L5_C^ribosomal L5P family C-terminus^137-230^E:4.7e-32",".",".","COG0094^This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits","KEGG:ath:AT4G01310`KO:K02931","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009735^biological_process^response to cytokinin`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN31116_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.20294589250256,0,0,"TRINITY_DN31116_c0_g1_i1","PSRP6_SPIOL^PSRP6_SPIOL^Q:155-418,H:1-93^58.06%ID^E:1e-18^RecName: Full=50S ribosomal protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN31116_c0_g1_i1.p1","155-475[+]","PSRP6_SPIOL^PSRP6_SPIOL^Q:1-88,H:1-93^58.06%ID^E:1e-28^RecName: Full=50S ribosomal protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN45683_c2_g5","leaves S. abrotanoides","roots S. abrotanoides",5.19180895982706,0,0,"TRINITY_DN45683_c2_g5_i3","C7A29_PANGI^C7A29_PANGI^Q:3-539,H:200-378^65.36%ID^E:6e-102^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax`C7A29_PANGI^C7A29_PANGI^Q:607-1008,H:377-510^67.91%ID^E:6e-102^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN45683_c2_g5_i3.p1","3-626[+]","C7A29_PANGI^C7A29_PANGI^Q:1-179,H:200-378^65.36%ID^E:2e-82^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^1-179^E:1.2e-26",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47315_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",5.18639061116922,0,0,"TRINITY_DN47315_c2_g1_i3","APR3_ARATH^APR3_ARATH^Q:445-1467,H:117-458^81.74%ID^E:0^RecName: Full=5'-adenylylsulfate reductase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47315_c2_g1_i3.p1","595-1470[+]","APR3_ARATH^APR3_ARATH^Q:1-291,H:167-458^80%ID^E:5e-177^RecName: Full=5'-adenylylsulfate reductase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01507.16^PAPS_reduct^Phosphoadenosine phosphosulfate reductase family^9-126^E:5.6e-29`PF00085.17^Thioredoxin^Thioredoxin^193-287^E:1.8e-11",".",".","COG0175^Reduction of activated sulfate into sulfite (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0033741^molecular_function^adenylyl-sulfate reductase (glutathione) activity`GO:0009973^molecular_function^adenylyl-sulfate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0045454^biological_process^cell redox homeostasis`GO:0019344^biological_process^cysteine biosynthetic process`GO:0000103^biological_process^sulfate assimilation`GO:0019419^biological_process^sulfate reduction","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN47358_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.17689940456435,0,0,"TRINITY_DN47358_c0_g1_i8","DTX33_ARATH^DTX33_ARATH^Q:1578-322,H:92-482^53.22%ID^E:6e-106^RecName: Full=Protein DETOXIFICATION 33 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX33_ARATH^DTX33_ARATH^Q:1748-1578,H:34-90^50.88%ID^E:3e-10^RecName: Full=Protein DETOXIFICATION 33 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47358_c0_g1_i8.p1","265-921[-]","DTX33_ARATH^DTX33_ARATH^Q:3-200,H:285-482^57.58%ID^E:3e-67^RecName: Full=Protein DETOXIFICATION 33 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^1-145^E:9.1e-27",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G47530`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46033_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",5.17264839656018,0,0,"TRINITY_DN46033_c3_g1_i1","RR6_ARATH^RR6_ARATH^Q:1038-493,H:18-205^63.49%ID^E:4e-62^RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46033_c3_g1_i1.p1","484-1077[-]","RR6_ARATH^RR6_ARATH^Q:14-195,H:18-205^63.49%ID^E:3e-70^RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01250.14^Ribosomal_S6^Ribosomal protein S6^92-190^E:1.4e-17",".",".","ENOG4111S82^ribosomal protein S6","KEGG:ath:AT1G64510`KO:K02990","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005840^cellular_component^ribosome`GO:0009579^cellular_component^thylakoid`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0019843^molecular_function^rRNA binding`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45911_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",5.16722187597293,0,0,"TRINITY_DN45911_c3_g1_i13","PP397_ARATH^PP397_ARATH^Q:2985-2098,H:5-317^54.63%ID^E:4e-108^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1571-699,H:317-569^50.17%ID^E:5e-74^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:2904-2098,H:188-456^27.68%ID^E:3e-26^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:2955-2188,H:258-496^27.8%ID^E:2e-22^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:2886-2062,H:121-397^24.11%ID^E:3e-21^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1571-1026,H:210-427^26.48%ID^E:2e-16^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1571-1029,H:102-281^29.57%ID^E:5e-15^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1520-927,H:49-256^26.92%ID^E:1e-12^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45911_c3_g1_i13.p1","2056-3102[-]","PP397_ARATH^PP397_ARATH^Q:40-335,H:5-317^54.63%ID^E:7e-117^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:67-335,H:188-456^27.68%ID^E:4e-28^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:50-305,H:258-496^27.8%ID^E:7e-24^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:73-347,H:121-397^24.11%ID^E:7e-23^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^84-194^E:1.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^89-147^E:7.3e-07`PF01535.17^PPR^PPR repeat^103-132^E:0.96`PF13812.3^PPR_3^Pentatricopeptide repeat domain^123-183^E:9.7e-12`PF12854.4^PPR_1^PPR repeat^131-163^E:8e-06`PF13041.3^PPR_2^PPR repeat family^135-182^E:1.3e-12`PF01535.17^PPR^PPR repeat^138-168^E:8.5e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^159-220^E:6e-10`PF12854.4^PPR_1^PPR repeat^167-198^E:1.4e-06`PF13041.3^PPR_2^PPR repeat family^170-220^E:5.7e-11`PF01535.17^PPR^PPR repeat^173-200^E:5.5e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^202-247^E:1.1e-07`PF12854.4^PPR_1^PPR repeat^205-235^E:1.9e-07`PF13041.3^PPR_2^PPR repeat family^206-253^E:1.1e-14`PF01535.17^PPR^PPR repeat^210-239^E:0.00026`PF13812.3^PPR_3^Pentatricopeptide repeat domain^230-288^E:2.9e-11`PF12854.4^PPR_1^PPR repeat^238-269^E:1e-06`PF13041.3^PPR_2^PPR repeat family^241-290^E:2.5e-16`PF01535.17^PPR^PPR repeat^244-274^E:1.8e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^268-322^E:1.1e-07`PF12854.4^PPR_1^PPR repeat^273-305^E:3.6e-10`PF13041.3^PPR_2^PPR repeat family^280-323^E:6.5e-10`PF01535.17^PPR^PPR repeat^280-309^E:1.5e-06",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein",".",".",".",".","."]
["TRINITY_DN44395_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",5.14217816261751,0,0,"TRINITY_DN44395_c1_g5_i1","CNGC2_ARATH^CNGC2_ARATH^Q:244-1092,H:1-308^68.83%ID^E:6e-117^RecName: Full=Cyclic nucleotide-gated ion channel 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44395_c1_g5_i1.p1","232-1146[+]","CNGC2_ARATH^CNGC2_ARATH^Q:5-287,H:1-308^68.83%ID^E:2e-128^RecName: Full=Cyclic nucleotide-gated ion channel 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XPSE^Potassium voltage-gated channel, subfamily H (Eag-related), member","KEGG:ath:AT5G15410`KO:K05391","GO:0016021^cellular_component^integral component of membrane`GO:0005622^cellular_component^intracellular`GO:0005886^cellular_component^plasma membrane`GO:0005262^molecular_function^calcium channel activity`GO:0005516^molecular_function^calmodulin binding`GO:0030552^molecular_function^cAMP binding`GO:0030553^molecular_function^cGMP binding`GO:0005222^molecular_function^intracellular cAMP activated cation channel activity`GO:0005221^molecular_function^intracellular cyclic nucleotide activated cation channel activity`GO:0005242^molecular_function^inward rectifier potassium channel activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0098655^biological_process^cation transmembrane transport`GO:0006952^biological_process^defense response`GO:0007263^biological_process^nitric oxide mediated signal transduction`GO:0009626^biological_process^plant-type hypersensitive response`GO:0071805^biological_process^potassium ion transmembrane transport`GO:0042391^biological_process^regulation of membrane potential",".",".","."]
["TRINITY_DN5084_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.12603037135594,0,0,"TRINITY_DN5084_c0_g1_i2","CHLI_TOBAC^CHLI_TOBAC^Q:1391-360,H:83-426^92.44%ID^E:0^RecName: Full=Magnesium-chelatase subunit ChlI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN5084_c0_g1_i2.p1","357-1337[-]","CHLI_TOBAC^CHLI_TOBAC^Q:1-326,H:101-426^92.64%ID^E:0^RecName: Full=Magnesium-chelatase subunit ChlI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01078.18^Mg_chelatase^Magnesium chelatase, subunit ChlI^102-172^E:1.4e-07`PF00493.20^MCM^MCM2/3/5 family^102-261^E:6.3e-06",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0016851^molecular_function^magnesium chelatase activity`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0015979^biological_process^photosynthesis","GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0006260^biological_process^DNA replication",".","."]
["TRINITY_DN44399_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.1105890608924,0,0,"TRINITY_DN44399_c0_g1_i4","ROC3_NICSY^ROC3_NICSY^Q:1570-1920,H:157-273^76.07%ID^E:2e-54^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC3_NICSY^ROC3_NICSY^Q:467-682,H:90-161^77.78%ID^E:5e-29^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC3_NICSY^ROC3_NICSY^Q:1663-1926,H:92-187^45.83%ID^E:4e-14^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC3_NICSY^ROC3_NICSY^Q:491-679,H:192-254^41.27%ID^E:7e-10^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44399_c0_g1_i4.p1","170-727[+]","CP31B_ARATH^CP31B_ARATH^Q:32-171,H:43-177^56.94%ID^E:1e-40^RecName: Full=RNA-binding protein CP31B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CP31B_ARATH^CP31B_ARATH^Q:108-170,H:208-270^42.86%ID^E:5e-11^RecName: Full=RNA-binding protein CP31B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^109-171^E:8.2e-19","sigP:1^17^0.509^YES",".","ENOG4111FDY^Rna-binding protein","KEGG:ath:AT5G50250","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0008266^molecular_function^poly(U) RNA binding`GO:0045087^biological_process^innate immune response`GO:0006397^biological_process^mRNA processing`GO:0009451^biological_process^RNA modification","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN45238_c2_g6","leaves S. abrotanoides","roots S. abrotanoides",5.09947576835233,0,0,"TRINITY_DN45238_c2_g6_i1","AMO_ARATH^AMO_ARATH^Q:369-1634,H:53-475^57.41%ID^E:6e-155^RecName: Full=Primary amine oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AMO_ARATH^AMO_ARATH^Q:2771-3526,H:460-712^67.98%ID^E:5e-112^RecName: Full=Primary amine oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45238_c2_g6_i1.p1","165-1700[+]","AMO_ARATH^AMO_ARATH^Q:69-490,H:53-475^57.41%ID^E:7e-171^RecName: Full=Primary amine oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02727.13^Cu_amine_oxidN2^Copper amine oxidase, N2 domain^76-154^E:7.1e-24`PF02728.13^Cu_amine_oxidN3^Copper amine oxidase, N3 domain^168-267^E:1.5e-24`PF01179.17^Cu_amine_oxid^Copper amine oxidase, enzyme domain^291-482^E:2.6e-59","sigP:1^28^0.765^YES",".","COG3733^amine oxidase","KEGG:ath:AT1G62810`KO:K00276","GO:0052595^molecular_function^aliphatic-amine oxidase activity`GO:0052594^molecular_function^aminoacetone:oxygen oxidoreductase(deaminating) activity`GO:0005507^molecular_function^copper ion binding`GO:0052596^molecular_function^phenethylamine:oxygen oxidoreductase (deaminating) activity`GO:0008131^molecular_function^primary amine oxidase activity`GO:0048038^molecular_function^quinone binding`GO:0052593^molecular_function^tryptamine:oxygen oxidoreductase (deaminating) activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009308^biological_process^amine metabolic process`GO:0006809^biological_process^nitric oxide biosynthetic process","GO:0005507^molecular_function^copper ion binding`GO:0008131^molecular_function^primary amine oxidase activity`GO:0048038^molecular_function^quinone binding`GO:0009308^biological_process^amine metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46511_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",5.09871987391039,0,0,"TRINITY_DN46511_c4_g1_i1","RPE_SPIOL^RPE_SPIOL^Q:631-113,H:55-227^97.11%ID^E:1e-115^RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN46511_c4_g1_i1.p1","104-775[-]","RPE_SPIOL^RPE_SPIOL^Q:4-221,H:2-227^84.51%ID^E:2e-130^RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00834.16^Ribul_P_3_epim^Ribulose-phosphate 3 epimerase family^58-221^E:1.4e-72",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0046872^molecular_function^metal ion binding`GO:0004750^molecular_function^ribulose-phosphate 3-epimerase activity`GO:0006098^biological_process^pentose-phosphate shunt`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0016857^molecular_function^racemase and epimerase activity, acting on carbohydrates and derivatives`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44262_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",5.09099183756085,0,0,"TRINITY_DN44262_c4_g1_i10","OTU_ARATH^OTU_ARATH^Q:1063-800,H:227-314^76.14%ID^E:1e-56^RecName: Full=OTU domain-containing protein At3g57810;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`OTU_ARATH^OTU_ARATH^Q:1475-1074,H:79-209^41.73%ID^E:1e-56^RecName: Full=OTU domain-containing protein At3g57810;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44262_c4_g1_i10.p1","1041-1685[-]","OTU_ARATH^OTU_ARATH^Q:56-208,H:31-213^40.98%ID^E:1e-24^RecName: Full=OTU domain-containing protein At3g57810;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5539^otu domain-containing protein","KEGG:ath:AT3G57810","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN45222_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",5.07424653346365,0,0,"TRINITY_DN45222_c3_g1_i9","FTSH2_ARATH^FTSH2_ARATH^Q:2380-329,H:1-678^86.3%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45222_c3_g1_i9.p1","299-2380[-]","FTSH2_ARATH^FTSH2_ARATH^Q:1-684,H:1-678^86.3%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^268-399^E:2.4e-45`PF01434.15^Peptidase_M41^Peptidase family M41^462-671^E:2.4e-72",".",".","COG0465^Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)","KEGG:ath:AT2G30950`KO:K03798","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0005524^molecular_function^ATP binding`GO:0004176^molecular_function^ATP-dependent peptidase activity`GO:0046872^molecular_function^metal ion binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008237^molecular_function^metallopeptidase activity`GO:0007275^biological_process^multicellular organism development`GO:0010205^biological_process^photoinhibition`GO:0010206^biological_process^photosystem II repair`GO:0030163^biological_process^protein catabolic process`GO:0006508^biological_process^proteolysis`GO:0010304^biological_process^PSII associated light-harvesting complex II catabolic process`GO:0072593^biological_process^reactive oxygen species metabolic process`GO:0009735^biological_process^response to cytokinin`GO:0010027^biological_process^thylakoid membrane organization","GO:0005524^molecular_function^ATP binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN44513_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",5.06980140638206,0,0,"TRINITY_DN44513_c2_g1_i14","SHH1_ARATH^SHH1_ARATH^Q:2280-1729,H:11-204^38.5%ID^E:3e-28^RecName: Full=Protein SAWADEE HOMEODOMAIN HOMOLOG 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SHH1_ARATH^SHH1_ARATH^Q:1314-1192,H:204-244^60.98%ID^E:3e-07^RecName: Full=Protein SAWADEE HOMEODOMAIN HOMOLOG 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44513_c2_g1_i14.p1","1531-2310[-]","SHH1_ARATH^SHH1_ARATH^Q:11-194,H:11-204^38.5%ID^E:1e-37^RecName: Full=Protein SAWADEE HOMEODOMAIN HOMOLOG 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16719.2^SAWADEE^SAWADEE domain^116-195^E:1.5e-22",".",".","ENOG411141H^NA","KEGG:ath:AT1G15215","GO:0005634^cellular_component^nucleus`GO:0003682^molecular_function^chromatin binding`GO:0046872^molecular_function^metal ion binding`GO:0006306^biological_process^DNA methylation`GO:0031047^biological_process^gene silencing by RNA`GO:0006346^biological_process^methylation-dependent chromatin silencing","GO:0003682^molecular_function^chromatin binding",".","."]
["TRINITY_DN43795_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.06083228791231,0,0,"TRINITY_DN43795_c0_g1_i9","SR54C_ARATH^SR54C_ARATH^Q:1867-533,H:119-564^87.67%ID^E:0^RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43795_c0_g1_i9.p1","530-1738[-]","SR54C_ARATH^SR54C_ARATH^Q:1-402,H:162-564^87.59%ID^E:0^RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06414.9^Zeta_toxin^Zeta toxin^10-120^E:9e-07`PF00448.19^SRP54^SRP54-type protein, GTPase domain^15-210^E:9.9e-76`PF01583.17^APS_kinase^Adenylylsulphate kinase^15-56^E:5.5e-05`PF02374.12^ArsA_ATPase^Anion-transporting ATPase^17-52^E:7.7e-05`PF01656.20^CbiA^CobQ/CobB/MinD/ParA nucleotide binding domain^25-170^E:3.3e-06`PF02978.16^SRP_SPB^Signal peptide binding domain^241-339^E:1.1e-25",".",".","COG0541^Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY","KEGG:ath:AT5G03940`KO:K03106","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0080085^cellular_component^signal recognition particle, chloroplast targeting`GO:0005786^cellular_component^signal recognition particle, endoplasmic reticulum targeting`GO:0008312^molecular_function^7S RNA binding`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0006614^biological_process^SRP-dependent cotranslational protein targeting to membrane","GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity`GO:0005525^molecular_function^GTP binding`GO:0006614^biological_process^SRP-dependent cotranslational protein targeting to membrane`GO:0004020^molecular_function^adenylylsulfate kinase activity`GO:0000103^biological_process^sulfate assimilation`GO:0008312^molecular_function^7S RNA binding`GO:0048500^cellular_component^signal recognition particle",".","."]
["TRINITY_DN46357_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",5.04451229600332,0,0,"TRINITY_DN46357_c0_g1_i4","GCSP_SOLTU^GCSP_SOLTU^Q:427-3282,H:1-949^85.97%ID^E:0^RecName: Full=Glycine dehydrogenase (decarboxylating), mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`GCSP_SOLTU^GCSP_SOLTU^Q:3311-3613,H:933-1006^59.41%ID^E:2e-27^RecName: Full=Glycine dehydrogenase (decarboxylating), mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46357_c0_g1_i4.p1","427-3318[+]","GCSP_SOLTU^GCSP_SOLTU^Q:1-952,H:1-949^86.09%ID^E:0^RecName: Full=Glycine dehydrogenase (decarboxylating), mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF02347.13^GDC-P^Glycine cleavage system P-protein^82-508^E:5.7e-185`PF02347.13^GDC-P^Glycine cleavage system P-protein^520-801^E:3.7e-11",".",".","COG0403^The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor`COG1003^The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor",".","GO:0005739^cellular_component^mitochondrion`GO:0004375^molecular_function^glycine dehydrogenase (decarboxylating) activity`GO:0006546^biological_process^glycine catabolic process","GO:0004375^molecular_function^glycine dehydrogenase (decarboxylating) activity`GO:0006546^biological_process^glycine catabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44502_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",5.04224565323748,0,0,"TRINITY_DN44502_c3_g1_i1","F16P2_SOLTU^F16P2_SOLTU^Q:665-946,H:1-94^91.49%ID^E:8e-87^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`F16P2_SOLTU^F16P2_SOLTU^Q:1036-1464,H:95-176^48.95%ID^E:8e-87^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`F16P2_SOLTU^F16P2_SOLTU^Q:1527-1634,H:170-205^80.56%ID^E:8e-87^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`F16P2_SOLTU^F16P2_SOLTU^Q:2247-2492,H:250-305^64.63%ID^E:8e-37^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`F16P2_SOLTU^F16P2_SOLTU^Q:1956-2039,H:203-230^85.71%ID^E:8e-37^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`F16P2_SOLTU^F16P2_SOLTU^Q:2102-2167,H:228-249^68.18%ID^E:8e-37^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`F16P2_SOLTU^F16P2_SOLTU^Q:2724-2816,H:310-340^90.32%ID^E:2e-08^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44502_c3_g1_i1.p1","665-988[+]","F16P2_ARATH^F16P2_ARATH^Q:1-94,H:1-94^93.62%ID^E:6e-57^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00316.17^FBPase^Fructose-1-6-bisphosphatase, N-terminal domain^13-97^E:2.2e-25",".",".","COG0158^D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1","KEGG:ath:AT1G43670`KO:K03841","GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0046872^molecular_function^metal ion binding`GO:0016311^biological_process^dephosphorylation`GO:0030388^biological_process^fructose 1,6-bisphosphate metabolic process`GO:0015979^biological_process^photosynthesis`GO:0009737^biological_process^response to abscisic acid`GO:0009750^biological_process^response to fructose`GO:0005983^biological_process^starch catabolic process`GO:0005986^biological_process^sucrose biosynthetic process","GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0042578^molecular_function^phosphoric ester hydrolase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN43908_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",5.00919676845032,0,0,"TRINITY_DN43908_c2_g1_i7","GGT2_ARATH^GGT2_ARATH^Q:617-1546,H:4-313^88.71%ID^E:0^RecName: Full=Glutamate--glyoxylate aminotransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GGT2_ARATH^GGT2_ARATH^Q:2015-2410,H:348-481^85.07%ID^E:9e-68^RecName: Full=Glutamate--glyoxylate aminotransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GGT2_ARATH^GGT2_ARATH^Q:1709-1840,H:312-355^86.36%ID^E:2e-15^RecName: Full=Glutamate--glyoxylate aminotransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43908_c2_g1_i7.p1","611-1582[+]","GGT1_ARATH^GGT1_ARATH^Q:3-312,H:4-313^88.71%ID^E:0^RecName: Full=Glutamate--glyoxylate aminotransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00155.18^Aminotran_1_2^Aminotransferase class I and II^83-303^E:7.9e-30",".",".","COG0436^aminotransferase","KEGG:ath:AT1G23310`KO:K14272","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0016020^cellular_component^membrane`GO:0005777^cellular_component^peroxisome`GO:0005773^cellular_component^vacuole`GO:0008453^molecular_function^alanine-glyoxylate transaminase activity`GO:0047958^molecular_function^glycine:2-oxoglutarate aminotransferase activity`GO:0004021^molecular_function^L-alanine:2-oxoglutarate aminotransferase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0006545^biological_process^glycine biosynthetic process`GO:0042853^biological_process^L-alanine catabolic process`GO:0009853^biological_process^photorespiration`GO:0001666^biological_process^response to hypoxia","GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0009058^biological_process^biosynthetic process",".","."]
["TRINITY_DN46595_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",5.00474633301546,0,0,"TRINITY_DN46595_c1_g2_i2","TRXM4_ARATH^TRXM4_ARATH^Q:799-272,H:1-191^53.65%ID^E:4e-61^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46595_c1_g2_i2.p1","269-799[-]","TRXM4_ARATH^TRXM4_ARATH^Q:1-176,H:1-191^53.65%ID^E:7e-63^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^75-173^E:5.2e-32`PF13098.3^Thioredoxin_2^Thioredoxin-like domain^90-170^E:5e-08`PF14595.3^Thioredoxin_9^Thioredoxin^96-166^E:1.4e-08",".",".","COG0526^Thioredoxin","KEGG:ath:AT3G15360`KO:K03671","GO:0005618^cellular_component^cell wall`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0008047^molecular_function^enzyme activator activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0043086^biological_process^negative regulation of catalytic activity`GO:0055114^biological_process^oxidation-reduction process`GO:0043085^biological_process^positive regulation of catalytic activity`GO:0006457^biological_process^protein folding`GO:0006109^biological_process^regulation of carbohydrate metabolic process`GO:0009735^biological_process^response to cytokinin`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN43821_c3_g3","leaves S. abrotanoides","roots S. abrotanoides",4.99939237008367,0,0,"TRINITY_DN43821_c3_g3_i1","CAS1_MALDO^CAS1_MALDO^Q:376-972,H:1-206^79.13%ID^E:1e-164^RecName: Full=L-3-cyanoalanine synthase 1, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus`CAS1_MALDO^CAS1_MALDO^Q:1074-1583,H:205-374^81.76%ID^E:1e-164^RecName: Full=L-3-cyanoalanine synthase 1, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus",".","TRINITY_DN43821_c3_g3_i1.p1","376-1050[+]","CAS1_MALDO^CAS1_MALDO^Q:1-199,H:1-206^79.13%ID^E:2e-111^RecName: Full=L-3-cyanoalanine synthase 1, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus","PF00291.22^PALP^Pyridoxal-phosphate dependent enzyme^53-197^E:2.5e-33",".",".",".","KEGG:mdm:103401891`KO:K13034","GO:0005739^cellular_component^mitochondrion`GO:0004124^molecular_function^cysteine synthase activity`GO:0050017^molecular_function^L-3-cyanoalanine synthase activity`GO:0016740^molecular_function^transferase activity`GO:0019499^biological_process^cyanide metabolic process`GO:0006535^biological_process^cysteine biosynthetic process from serine`GO:0009836^biological_process^fruit ripening, climacteric`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN47355_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",4.99585149090636,0,0,"TRINITY_DN47355_c1_g3_i1","21KD_DAUCA^21KD_DAUCA^Q:164-607,H:28-189^38.04%ID^E:6e-25^RecName: Full=21 kDa protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN47355_c1_g3_i1.p1","44-613[+]","21KD_DAUCA^21KD_DAUCA^Q:41-188,H:28-189^38.04%ID^E:4e-26^RecName: Full=21 kDa protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF04043.12^PMEI^Plant invertase/pectin methylesterase inhibitor^42-180^E:1.1e-24","sigP:1^23^0.785^YES",".",".",".","GO:0004857^molecular_function^enzyme inhibitor activity","GO:0004857^molecular_function^enzyme inhibitor activity",".","."]
["TRINITY_DN40092_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.99480215254914,0,0,"TRINITY_DN40092_c0_g1_i5","MCAT_ARATH^MCAT_ARATH^Q:1235-321,H:1-300^80.33%ID^E:4e-148^RecName: Full=Mitochondrial carnitine/acylcarnitine carrier-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40092_c0_g1_i5.p1","318-1235[-]","MCAT_ARATH^MCAT_ARATH^Q:1-305,H:1-300^80.66%ID^E:8e-178^RecName: Full=Mitochondrial carnitine/acylcarnitine carrier-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00153.24^Mito_carr^Mitochondrial carrier protein^4-94^E:9.2e-17`PF00153.24^Mito_carr^Mitochondrial carrier protein^102-208^E:2.3e-19`PF00153.24^Mito_carr^Mitochondrial carrier protein^222-303^E:2.3e-22",".",".","ENOG410XS86^Solute carrier family 25","KEGG:ath:AT5G46800`KO:K15109","GO:0009507^cellular_component^chloroplast`GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006839^biological_process^mitochondrial transport`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN45683_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",4.97276616097115,0,0,"TRINITY_DN45683_c2_g4_i6","C7A29_PANGI^C7A29_PANGI^Q:5-703,H:147-378^59.83%ID^E:6e-88^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax`C7A29_PANGI^C7A29_PANGI^Q:1385-1801,H:373-510^68.35%ID^E:7e-52^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN45683_c2_g4_i6.p1","2-826[+]","C7A29_PANGI^C7A29_PANGI^Q:2-234,H:147-378^59.83%ID^E:1e-93^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^2-233^E:8.9e-32",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46667_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",4.92946912257475,0,0,"TRINITY_DN46667_c2_g2_i1","FDL16_ARATH^FDL16_ARATH^Q:2965-2003,H:4-305^27.68%ID^E:6e-15^RecName: Full=F-box/FBD/LRR-repeat protein At2g26030;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46667_c2_g2_i1.p1","1670-3013[-]","FDL16_ARATH^FDL16_ARATH^Q:17-337,H:4-305^27.68%ID^E:7e-19^RecName: Full=F-box/FBD/LRR-repeat protein At2g26030;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^18-54^E:1.1e-05",".",".","ENOG410ZUW1^F-box LRR-repeat protein","KEGG:ath:AT2G26030",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47346_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",4.86961293925231,0,0,"TRINITY_DN47346_c3_g1_i6",".",".","TRINITY_DN47346_c3_g1_i6.p1","1036-1662[-]","ABA2_SOLLC^ABA2_SOLLC^Q:62-179,H:526-645^30.08%ID^E:2e-07^RecName: Full=Zeaxanthin epoxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF16697.2^Yop-YscD_cpl^Inner membrane component of T3SS, cytoplasmic domain^98-157^E:3.8e-09`PF00498.23^FHA^FHA domain^106-173^E:2.8e-15",".",".","COG0654^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen",".","GO:0009507^cellular_component^chloroplast`GO:0016020^cellular_component^membrane`GO:0052663^molecular_function^antheraxanthin epoxidase activity`GO:0071949^molecular_function^FAD binding`GO:0009540^molecular_function^zeaxanthin epoxidase [overall] activity`GO:0052662^molecular_function^zeaxanthin epoxidase activity`GO:0009688^biological_process^abscisic acid biosynthetic process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN25494_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.85072674324665,0,0,"TRINITY_DN25494_c0_g1_i1","LTD_ARATH^LTD_ARATH^Q:212-601,H:46-175^80.77%ID^E:2e-74^RecName: Full=Protein LHCP TRANSLOCATION DEFECT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN25494_c0_g1_i1.p1","71-604[+]","LTD_ARATH^LTD_ARATH^Q:48-177,H:46-175^80.77%ID^E:5e-76^RecName: Full=Protein LHCP TRANSLOCATION DEFECT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111Q7E^Involved in the import of light-harvesting complex proteins (LHCP) and subsequent routing of these proteins to the chloroplast signal recognition particle (SRP) pathway","KEGG:ath:AT1G50900","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0090391^biological_process^granum assembly`GO:0006886^biological_process^intracellular protein transport`GO:0080167^biological_process^response to karrikin",".",".","."]
["TRINITY_DN45982_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",4.84552454534046,0,0,"TRINITY_DN45982_c2_g1_i2","KAI2_ARATH^KAI2_ARATH^Q:709-332,H:1-126^77.78%ID^E:1e-67^RecName: Full=Probable esterase KAI2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45982_c2_g1_i2.p1","251-709[-]","KAI2_ARATH^KAI2_ARATH^Q:1-126,H:1-126^77.78%ID^E:2e-70^RecName: Full=Probable esterase KAI2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^19-123^E:2.5e-11`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^20-120^E:1.6e-09",".",".","COG0596^Alpha beta hydrolase","KEGG:ath:AT4G37470","GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0016787^molecular_function^hydrolase activity`GO:0009704^biological_process^de-etiolation`GO:0009640^biological_process^photomorphogenesis`GO:0080167^biological_process^response to karrikin",".",".","."]
["TRINITY_DN47165_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",4.84305876140926,0,0,"TRINITY_DN47165_c3_g2_i5","BEL1_ARATH^BEL1_ARATH^Q:2191-1604,H:194-417^50%ID^E:3e-40^RecName: Full=Homeobox protein BEL1 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BEL1_ARATH^BEL1_ARATH^Q:1329-553,H:418-610^39.18%ID^E:9e-19^RecName: Full=Homeobox protein BEL1 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47165_c3_g2_i5.p1","1601-2698[-]","BEL1_ARATH^BEL1_ARATH^Q:114-365,H:116-417^46.69%ID^E:7e-67^RecName: Full=Homeobox protein BEL1 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07526.8^POX^Associated with HOX^170-287^E:1e-42",".",".","ENOG410XPMQ^homeobox","KEGG:ath:AT5G41410","GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0009506^cellular_component^plasmodesma`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44558_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",4.83304684085902,0,0,"TRINITY_DN44558_c1_g3_i5","PTR27_ARATH^PTR27_ARATH^Q:444-1547,H:36-405^78.98%ID^E:8e-175^RecName: Full=Protein NRT1/ PTR FAMILY 6.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44558_c1_g3_i5.p1","474-1553[+]","PTR27_ARATH^PTR27_ARATH^Q:1-358,H:46-405^78.95%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 6.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^51-353^E:2.7e-79",".",".","COG3104^transporter","KEGG:ath:AT2G26690","GO:0016021^cellular_component^integral component of membrane`GO:0015293^molecular_function^symporter activity`GO:0042128^biological_process^nitrate assimilation`GO:0006857^biological_process^oligopeptide transport`GO:0009753^biological_process^response to jasmonic acid`GO:0009611^biological_process^response to wounding","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46318_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",4.82403290064359,0,0,"TRINITY_DN46318_c3_g4_i1","RR13_ARATH^RR13_ARATH^Q:627-289,H:42-154^85.84%ID^E:4e-65^RecName: Full=30S ribosomal protein S13, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46318_c3_g4_i1.p1","247-747[-]","RR13_ARATH^RR13_ARATH^Q:1-153,H:1-154^73.42%ID^E:1e-75^RecName: Full=30S ribosomal protein S13, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00416.19^Ribosomal_S13^Ribosomal protein S13/S18^48-152^E:4e-32",".",".","COG0099^Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46302_c1_g10","leaves S. abrotanoides","roots S. abrotanoides",4.81640732223025,0,0,"TRINITY_DN46302_c1_g10_i4","RR7_ACOCL^RR7_ACOCL^Q:1729-2193,H:1-155^98.06%ID^E:2e-99^RecName: Full=30S ribosomal protein S7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Acoraceae; Acorus",".","TRINITY_DN46302_c1_g10_i4.p1","1729-2196[+]","RR7_ACOCL^RR7_ACOCL^Q:1-155,H:1-155^98.06%ID^E:1e-108^RecName: Full=30S ribosomal protein S7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Acoraceae; Acorus","PF00177.18^Ribosomal_S7^Ribosomal protein S7p/S5e^1-149^E:4.6e-52",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0015935^cellular_component^small ribosomal subunit`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN44591_c7_g3","leaves S. abrotanoides","roots S. abrotanoides",4.77983629236452,0,0,"TRINITY_DN44591_c7_g3_i2","PAP3_BRACM^PAP3_BRACM^Q:1419-442,H:20-359^57.46%ID^E:2e-118^RecName: Full=Plastid lipid-associated protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN44591_c7_g3_i2.p1","439-1479[-]","PAP3_ARATH^PAP3_ARATH^Q:1-346,H:1-375^54.01%ID^E:3e-122^RecName: Full=Probable plastid-lipid-associated protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04755.9^PAP_fibrillin^PAP_fibrillin^123-337^E:7.7e-69",".",".","ENOG4111HVZ^FiBrilliN","KEGG:ath:AT2G35490","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009536^cellular_component^plastid`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid",".",".","."]
["TRINITY_DN40553_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.77818576555852,0,0,"TRINITY_DN40553_c0_g1_i1","RK19_SPIOL^RK19_SPIOL^Q:319-807,H:71-233^68.71%ID^E:8e-71^RecName: Full=50S ribosomal protein L19, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN40553_c0_g1_i1.p1","145-810[+]","RK192_ARATH^RK192_ARATH^Q:2-221,H:4-229^62.17%ID^E:2e-77^RecName: Full=50S ribosomal protein L19-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01245.17^Ribosomal_L19^Ribosomal protein L19^117-214^E:7.5e-32",".",".","COG0335^This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (By similarity)","KEGG:ath:AT5G47190`KO:K02884","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN40628_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.76855416296898,0,0,"TRINITY_DN40628_c0_g1_i5","GAPN_NICPL^GAPN_NICPL^Q:200-1459,H:1-420^91.19%ID^E:0^RecName: Full=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`GAPN_NICPL^GAPN_NICPL^Q:1551-1778,H:421-496^94.74%ID^E:1e-37^RecName: Full=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN40628_c0_g1_i5.p1","200-1543[+]","GAPN_NICPL^GAPN_NICPL^Q:1-420,H:1-420^91.19%ID^E:0^RecName: Full=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00171.19^Aldedh^Aldehyde dehydrogenase family^24-421^E:8.9e-123",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0008886^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45174_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",4.747959306313,0,0,"TRINITY_DN45174_c3_g2_i1","RR17_ARATH^RR17_ARATH^Q:191-598,H:10-146^61.59%ID^E:5e-34^RecName: Full=30S ribosomal protein S17, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45174_c3_g2_i1.p1","173-613[+]","RR17_ARATH^RR17_ARATH^Q:3-142,H:6-146^63.01%ID^E:5e-54^RecName: Full=30S ribosomal protein S17, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00366.17^Ribosomal_S17^Ribosomal protein S17^50-113^E:8.1e-24",".",".","COG0186^One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal","KEGG:ath:AT1G79850`KO:K02961","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0000312^cellular_component^plastid small ribosomal subunit`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0032544^biological_process^plastid translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46258_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",4.742011934583,0,0,"TRINITY_DN46258_c3_g2_i2","U73C3_ARATH^U73C3_ARATH^Q:1839-397,H:13-490^49.69%ID^E:6e-151^RecName: Full=UDP-glycosyltransferase 73C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46258_c3_g2_i2.p1","340-1860[-]","U73C3_ARATH^U73C3_ARATH^Q:8-488,H:13-490^49.69%ID^E:2e-171^RecName: Full=UDP-glycosyltransferase 73C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^277-408^E:6.5e-21",".",".","COG1819^Transferase","KEGG:ath:AT2G36780`KO:K13496","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45714_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",4.70872649082967,0,0,"TRINITY_DN45714_c1_g3_i2","AB5F_ARATH^AB5F_ARATH^Q:187-2148,H:1-628^73.82%ID^E:0^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB5F_ARATH^AB5F_ARATH^Q:535-1299,H:418-629^27.73%ID^E:7e-11^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45714_c1_g3_i2.p1","187-2343[+]","AB5F_ARATH^AB5F_ARATH^Q:1-717,H:1-691^75.52%ID^E:0^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^139-314^E:4.6e-25`PF12848.4^ABC_tran_Xtn^ABC transporter^353-440^E:9.9e-18`PF00005.24^ABC_tran^ABC transporter^467-598^E:6e-27",".",".","COG0488^(ABC) transporter","KEGG:ath:AT5G64840","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0005215^molecular_function^transporter activity`GO:0009624^biological_process^response to nematode","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN44462_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",4.70128135007354,0,0,"TRINITY_DN44462_c5_g1_i3","ROC3_NICSY^ROC3_NICSY^Q:1117-266,H:2-276^56.1%ID^E:6e-85^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44462_c5_g1_i3.p1","263-1126[-]","ROC3_NICSY^ROC3_NICSY^Q:4-287,H:2-276^56.25%ID^E:2e-94^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^112-181^E:1.4e-17`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^204-274^E:2.6e-23`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^243-276^E:0.46",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN45949_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",4.67214625720742,0,0,"TRINITY_DN45949_c1_g1_i4","PAP6_ARATH^PAP6_ARATH^Q:938-375,H:97-284^80.32%ID^E:3e-102^RecName: Full=Probable plastid-lipid-associated protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45949_c1_g1_i4.p1","372-1205[-]","PAP6_ARATH^PAP6_ARATH^Q:90-277,H:97-284^80.32%ID^E:6e-106^RecName: Full=Probable plastid-lipid-associated protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04755.9^PAP_fibrillin^PAP_fibrillin^80-274^E:2.4e-49",".",".","ENOG4111H8W^harpin binding protein 1","KEGG:ath:AT3G23400","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016020^cellular_component^membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0009658^biological_process^chloroplast organization`GO:0042742^biological_process^defense response to bacterium`GO:0010193^biological_process^response to ozone",".",".","."]
["TRINITY_DN44164_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",4.66487487182486,0,0,"TRINITY_DN44164_c2_g1_i1","GPDL2_ARATH^GPDL2_ARATH^Q:1169-849,H:830-935^47.66%ID^E:8e-57^RecName: Full=Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GPDL2_ARATH^GPDL2_ARATH^Q:846-328,H:937-1107^40.68%ID^E:8e-57^RecName: Full=Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44164_c2_g1_i1.p2","774-1175[-]","GPDL2_ARATH^GPDL2_ARATH^Q:3-109,H:830-935^47.66%ID^E:2e-32^RecName: Full=Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^2-111^E:5.8e-21`PF00069.22^Pkinase^Protein kinase domain^2-117^E:4.6e-19",".",".","COG0584^glycerophosphoryl diester phosphodiesterase","KEGG:ath:AT1G66980","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0008889^molecular_function^glycerophosphodiester phosphodiesterase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006968^biological_process^cellular defense response`GO:0006071^biological_process^glycerol metabolic process`GO:0006629^biological_process^lipid metabolic process","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN28045_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",4.65926748490032,0,0,"TRINITY_DN28045_c0_g2_i1","RK29_ARATH^RK29_ARATH^Q:879-412,H:1-158^64.38%ID^E:4e-52^RecName: Full=50S ribosomal protein L29, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28045_c0_g2_i1.p1","373-879[-]","RK29_ARATH^RK29_ARATH^Q:1-156,H:1-158^65%ID^E:3e-57^RecName: Full=50S ribosomal protein L29, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00831.20^Ribosomal_L29^Ribosomal L29 protein^66-122^E:2.7e-16",".",".","COG0255^50s ribosomal protein l29","KEGG:ath:AT5G65220`KO:K02904","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009295^cellular_component^nucleoid`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45662_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",4.65547460395774,0,0,"TRINITY_DN45662_c2_g1_i7","NDHL_ARATH^NDHL_ARATH^Q:1177-833,H:76-190^62.61%ID^E:2e-43^RecName: Full=NAD(P)H-quinone oxidoreductase subunit L, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45662_c2_g1_i7.p1","1870-3408[+]","ADLO1_ARATH^ADLO1_ARATH^Q:137-297,H:610-772^30.3%ID^E:4e-07^RecName: Full=Protein ARABIDILLO 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05804.9^KAP^Kinesin-associated protein (KAP)^201-306^E:5.1e-05",".",".","ENOG410ZZ0B^Armadillo beta-catenin repeat family protein","KEGG:ath:AT2G44900","GO:0005634^cellular_component^nucleus`GO:0048527^biological_process^lateral root development",".",".","."]
["TRINITY_DN46209_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.64485126283452,0,0,"TRINITY_DN46209_c0_g1_i3","ROC3_NICSY^ROC3_NICSY^Q:1962-1759,H:191-258^41.18%ID^E:7e-10^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC3_NICSY^ROC3_NICSY^Q:2906-2703,H:93-161^37.68%ID^E:8e-06^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46209_c0_g1_i3.p1","2625-3173[-]","CP31B_ARATH^CP31B_ARATH^Q:75-165,H:101-186^38.71%ID^E:2e-09^RecName: Full=RNA-binding protein CP31B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CP31B_ARATH^CP31B_ARATH^Q:95-155,H:208-269^35.48%ID^E:2e-06^RecName: Full=RNA-binding protein CP31B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^96-156^E:1e-15`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^106-154^E:0.27",".",".","ENOG4111FDY^Rna-binding protein","KEGG:ath:AT5G50250","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0008266^molecular_function^poly(U) RNA binding`GO:0045087^biological_process^innate immune response`GO:0006397^biological_process^mRNA processing`GO:0009451^biological_process^RNA modification","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN41459_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.64406897806193,0,0,"TRINITY_DN41459_c0_g1_i3","PPF1_PEA^PPF1_PEA^Q:1601-315,H:1-426^73.9%ID^E:0^RecName: Full=Inner membrane protein PPF-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN41459_c0_g1_i3.p1","270-1601[-]","PPF1_PEA^PPF1_PEA^Q:1-429,H:1-426^75.35%ID^E:0^RecName: Full=Inner membrane protein PPF-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF02096.17^60KD_IMP^60Kd inner membrane protein^120-334^E:1.9e-54",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0051205^biological_process^protein insertion into membrane","GO:0051205^biological_process^protein insertion into membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44143_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",4.63945584307942,0,0,"TRINITY_DN44143_c1_g2_i7","HHL1_ARATH^HHL1_ARATH^Q:783-1187,H:84-218^74.81%ID^E:3e-56^RecName: Full=Protein HHL1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HHL1_ARATH^HHL1_ARATH^Q:313-576,H:4-92^62.22%ID^E:9e-28^RecName: Full=Protein HHL1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44143_c1_g2_i7.p1","786-1250[+]","HHL1_ARATH^HHL1_ARATH^Q:3-150,H:87-230^72.3%ID^E:1e-70^RecName: Full=Protein HHL1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^19^0.473^YES",".","ENOG4111RV1^NA","KEGG:ath:AT1G67700","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006518^biological_process^peptide metabolic process`GO:0006508^biological_process^proteolysis",".",".","."]
["TRINITY_DN38095_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.63930356563283,0,0,"TRINITY_DN38095_c0_g1_i2","RK24_TOBAC^RK24_TOBAC^Q:145-708,H:1-186^77.25%ID^E:7e-99^RecName: Full=50S ribosomal protein L24, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN38095_c0_g1_i2.p1","145-711[+]","RK24_TOBAC^RK24_TOBAC^Q:1-188,H:1-186^77.25%ID^E:8e-101^RecName: Full=50S ribosomal protein L24, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00467.26^KOW^KOW motif^69-98^E:1.8e-07`PF17136.1^ribosomal_L24^Ribosomal proteins 50S L24/mitochondrial 39S L24^101-165^E:1e-18",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN38201_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.60801346642723,0,0,"TRINITY_DN38201_c0_g1_i2","RK34_ARATH^RK34_ARATH^Q:702-484,H:85-157^79.45%ID^E:2e-28^RecName: Full=50S ribosomal protein L34, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38201_c0_g1_i2.p1","481-942[-]","RK34_ARATH^RK34_ARATH^Q:51-153,H:56-157^67.31%ID^E:1e-34^RecName: Full=50S ribosomal protein L34, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00468.14^Ribosomal_L34^Ribosomal protein L34^108-142^E:8.6e-13",".",".","ENOG410Y1JV^ribosomal protein l34","KEGG:ath:AT1G29070`KO:K02914","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN43721_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",4.60639516891605,0,0,"TRINITY_DN43721_c0_g4_i1","RPI3_ARATH^RPI3_ARATH^Q:1093-365,H:34-276^76.54%ID^E:2e-125^RecName: Full=Probable ribose-5-phosphate isomerase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43721_c0_g4_i1.p1","362-1183[-]","RPI3_ARATH^RPI3_ARATH^Q:31-273,H:34-276^76.54%ID^E:5e-135^RecName: Full=Probable ribose-5-phosphate isomerase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06026.11^Rib_5-P_isom_A^Ribose 5-phosphate isomerase A (phosphoriboisomerase A)^92-266^E:6.6e-60",".",".","COG0120^phosphoriboisomerase A","KEGG:ath:AT3G04790`KO:K01807","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0004751^molecular_function^ribose-5-phosphate isomerase activity`GO:0042742^biological_process^defense response to bacterium`GO:0009052^biological_process^pentose-phosphate shunt, non-oxidative branch`GO:0019253^biological_process^reductive pentose-phosphate cycle`GO:0009735^biological_process^response to cytokinin","GO:0004751^molecular_function^ribose-5-phosphate isomerase activity`GO:0009052^biological_process^pentose-phosphate shunt, non-oxidative branch",".","."]
["TRINITY_DN46970_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",4.60135286063966,0,0,"TRINITY_DN46970_c0_g3_i3","ACCH1_ARATH^ACCH1_ARATH^Q:1409-348,H:12-365^59.6%ID^E:7e-150^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46970_c0_g3_i3.p1","339-1463[-]","ACCH1_ARATH^ACCH1_ARATH^Q:19-372,H:12-365^59.6%ID^E:1e-159^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^70-172^E:3.4e-19`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^225-318^E:7.7e-26",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT1G06620","GO:0046872^molecular_function^metal ion binding`GO:0016491^molecular_function^oxidoreductase activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46781_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",4.58872826825075,0,0,"TRINITY_DN46781_c1_g3_i2","C71A1_PERAE^C71A1_PERAE^Q:1090-1698,H:300-501^45.32%ID^E:3e-93^RecName: Full=Cytochrome P450 71A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Magnoliidae; Laurales; Lauraceae; Persea`C71A1_PERAE^C71A1_PERAE^Q:228-1010,H:40-303^39.48%ID^E:3e-93^RecName: Full=Cytochrome P450 71A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Magnoliidae; Laurales; Lauraceae; Persea",".","TRINITY_DN46781_c1_g3_i2.p1","105-1199[+]","F3PH_ARATH^F3PH_ARATH^Q:3-302,H:1-301^35.83%ID^E:2e-58^RecName: Full=Flavonoid 3'-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^34-300^E:4.7e-33","sigP:1^16^0.878^YES",".","COG2124^Cytochrome p450","KEGG:ath:AT5G07990`KO:K05280","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0016711^molecular_function^flavonoid 3'-monooxygenase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0009733^biological_process^response to auxin`GO:0044550^biological_process^secondary metabolite biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47157_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",4.5696053838686,0,0,"TRINITY_DN47157_c4_g2_i8","CSLG2_ARATH^CSLG2_ARATH^Q:2363-288,H:24-697^35.86%ID^E:2e-134^RecName: Full=Cellulose synthase-like protein G2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47157_c4_g2_i8.p1","213-2423[-]","CSLG2_ARATH^CSLG2_ARATH^Q:21-730,H:24-715^35.62%ID^E:3e-146^RecName: Full=Cellulose synthase-like protein G2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03552.11^Cellulose_synt^Cellulose synthase^99-378^E:2.7e-73`PF03552.11^Cellulose_synt^Cellulose synthase^384-729^E:3.6e-53",".",".","COG1215^Glycosyl transferase, family 2","KEGG:ath:AT4G24000","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0071555^biological_process^cell wall organization`GO:0030244^biological_process^cellulose biosynthetic process","GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0030244^biological_process^cellulose biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46159_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",4.55948938166664,0,0,"TRINITY_DN46159_c1_g4_i11","POR_DAUCA^POR_DAUCA^Q:1846-878,H:76-398^87.62%ID^E:0^RecName: Full=Protochlorophyllide reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN46159_c1_g4_i11.p1","875-1729[-]","PORA_ARATH^PORA_ARATH^Q:1-284,H:122-405^85.56%ID^E:0^RecName: Full=Protochlorophyllide reductase A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00106.22^adh_short^short chain dehydrogenase^6-116^E:4.7e-09",".",".","COG1028^Dehydrogenase reductase","KEGG:ath:AT5G54190`KO:K00218","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0016630^molecular_function^protochlorophyllide reductase activity`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0015979^biological_process^photosynthesis`GO:0009723^biological_process^response to ethylene",".",".","."]
["TRINITY_DN44010_c2_g7","leaves S. abrotanoides","roots S. abrotanoides",4.5490881565637,0,0,"TRINITY_DN44010_c2_g7_i1","CHI5_ARATH^CHI5_ARATH^Q:1131-391,H:24-273^59.52%ID^E:3e-95^RecName: Full=Endochitinase EP3 {ECO:0000303|PubMed:11525512};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44010_c2_g7_i1.p1","388-1185[-]","CHI5_ARATH^CHI5_ARATH^Q:1-265,H:6-273^56.67%ID^E:4e-101^RecName: Full=Endochitinase EP3 {ECO:0000303|PubMed:11525512};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00187.16^Chitin_bind_1^Chitin recognition protein^23-56^E:7.4e-08`PF00182.16^Glyco_hydro_19^Chitinase class I^67-265^E:3.7e-47","sigP:1^23^0.916^YES",".","COG3979^chitinase","KEGG:ath:AT3G54420`KO:K01183","GO:0005618^cellular_component^cell wall`GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0016998^biological_process^cell wall macromolecule catabolic process`GO:0006032^biological_process^chitin catabolic process`GO:0006952^biological_process^defense response`GO:0000272^biological_process^polysaccharide catabolic process`GO:0009617^biological_process^response to bacterium`GO:0009611^biological_process^response to wounding`GO:0010262^biological_process^somatic embryogenesis","GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0016998^biological_process^cell wall macromolecule catabolic process",".","."]
["TRINITY_DN47557_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",4.54516723158498,0,0,"TRINITY_DN47557_c1_g2_i2","GEDH1_OCIBA^GEDH1_OCIBA^Q:1427-348,H:1-360^89.17%ID^E:0^RecName: Full=Geraniol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum",".","TRINITY_DN47557_c1_g2_i2.p1","345-1427[-]","GEDH1_OCIBA^GEDH1_OCIBA^Q:1-360,H:1-360^89.17%ID^E:0^RecName: Full=Geraniol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^38-150^E:1.9e-27`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^194-317^E:6.3e-19",".",".",".",".","GO:0047924^molecular_function^geraniol dehydrogenase activity`GO:0008270^molecular_function^zinc ion binding","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45547_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",4.53204851155698,0,0,"TRINITY_DN45547_c2_g1_i10","Y4554_ARATH^Y4554_ARATH^Q:943-197,H:104-337^55.2%ID^E:3e-56^RecName: Full=Uncharacterized protein At4g15545;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4554_ARATH^Y4554_ARATH^Q:1606-1394,H:39-109^53.52%ID^E:4e-10^RecName: Full=Uncharacterized protein At4g15545;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45547_c2_g1_i10.p1","194-976[-]","Y4554_ARATH^Y4554_ARATH^Q:12-260,H:104-337^55.2%ID^E:2e-82^RecName: Full=Uncharacterized protein At4g15545;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111Y4K^NA","KEGG:ath:AT4G15545","GO:0016021^cellular_component^integral component of membrane`GO:0022857^molecular_function^transmembrane transporter activity",".",".","."]
["TRINITY_DN29111_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.52556038794023,0,0,"TRINITY_DN29111_c0_g1_i2","LPA1_ARATH^LPA1_ARATH^Q:322-1047,H:187-451^29.43%ID^E:9e-24^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN29111_c0_g1_i2.p1","142-1074[+]","LPA1_ARATH^LPA1_ARATH^Q:61-302,H:187-451^29.81%ID^E:1e-25^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11998.5^DUF3493^Protein of unknown function (DUF3493)^57-134^E:1.8e-27",".",".","ENOG410YYDP^Protein of unknown function (DUF3493)","KEGG:ath:AT1G02910","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010270^biological_process^photosystem II oxygen evolving complex assembly",".",".","."]
["TRINITY_DN41439_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.51335105781194,0,0,"TRINITY_DN41439_c0_g1_i3","PNSB3_ARATH^PNSB3_ARATH^Q:583-266,H:79-184^54.21%ID^E:2e-29^RecName: Full=Photosynthetic NDH subunit of subcomplex B 3, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41439_c0_g1_i3.p1","263-763[-]","PNSB3_ARATH^PNSB3_ARATH^Q:5-166,H:20-184^44.64%ID^E:3e-34^RecName: Full=Photosynthetic NDH subunit of subcomplex B 3, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00111.24^Fer2^2Fe-2S iron-sulfur cluster binding domain^99-148^E:1.2e-09",".",".","COG0633^Ferredoxin","KEGG:ath:AT3G16250","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010598^cellular_component^NAD(P)H dehydrogenase complex (plastoquinone)`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0046872^molecular_function^metal ion binding`GO:0009773^biological_process^photosynthetic electron transport in photosystem I`GO:0006810^biological_process^transport","GO:0009055^molecular_function^electron carrier activity`GO:0051536^molecular_function^iron-sulfur cluster binding",".","."]
["TRINITY_DN47078_c6_g1","leaves S. abrotanoides","roots S. abrotanoides",4.47280108946764,0,0,"TRINITY_DN47078_c6_g1_i9","GLTB_SPIOL^GLTB_SPIOL^Q:4191-490,H:284-1517^88.33%ID^E:0^RecName: Full=Ferredoxin-dependent glutamate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia`GLTB_SPIOL^GLTB_SPIOL^Q:5442-4558,H:1-312^73.72%ID^E:3e-147^RecName: Full=Ferredoxin-dependent glutamate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN47078_c6_g1_i9.p1","487-4152[-]","GLTB_SPIOL^GLTB_SPIOL^Q:1-1221,H:297-1517^88.29%ID^E:0^RecName: Full=Ferredoxin-dependent glutamate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00310.18^GATase_2^Glutamine amidotransferases class-II^1-127^E:1e-50`PF04898.11^Glu_syn_central^Glutamate synthase central domain^153-446^E:1.6e-106`PF01645.14^Glu_synthase^Conserved region in glutamate synthase^506-889^E:6.2e-159`PF01493.16^GXGXG^GXGXG motif^971-1152^E:5.5e-75",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0051538^molecular_function^3 iron, 4 sulfur cluster binding`GO:0016041^molecular_function^glutamate synthase (ferredoxin) activity`GO:0046872^molecular_function^metal ion binding`GO:0006541^biological_process^glutamine metabolic process`GO:0097054^biological_process^L-glutamate biosynthetic process","GO:0015930^molecular_function^glutamate synthase activity`GO:0006807^biological_process^nitrogen compound metabolic process`GO:0055114^biological_process^oxidation-reduction process`GO:0016638^molecular_function^oxidoreductase activity, acting on the CH-NH2 group of donors`GO:0006537^biological_process^glutamate biosynthetic process`GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46536_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",4.47043701476948,0,0,"TRINITY_DN46536_c1_g1_i4","EFTU1_SOYBN^EFTU1_SOYBN^Q:672-1889,H:74-479^91.38%ID^E:0^RecName: Full=Elongation factor Tu, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46536_c1_g1_i4.p1","468-1892[+]","EFTU_TOBAC^EFTU_TOBAC^Q:1-474,H:1-478^82.92%ID^E:0^RecName: Full=Elongation factor Tu, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00009.24^GTP_EFTU^Elongation factor Tu GTP binding domain^75-276^E:6.3e-56`PF03144.22^GTP_EFTU_D2^Elongation factor Tu domain 2^300-368^E:1.1e-17`PF03143.14^GTP_EFTU_D3^Elongation factor Tu C-terminal domain^373-472^E:6.7e-35",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003746^molecular_function^translation elongation factor activity","GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN47330_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.44568194122762,0,0,"TRINITY_DN47330_c0_g1_i17","IF2C_ARATH^IF2C_ARATH^Q:252-2747,H:34-820^58.22%ID^E:0^RecName: Full=Translation initiation factor IF-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IF2C_ARATH^IF2C_ARATH^Q:3020-3628,H:821-1023^80.3%ID^E:1e-85^RecName: Full=Translation initiation factor IF-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47330_c0_g1_i17.p1","189-2168[+]","IF2C_PHAVU^IF2C_PHAVU^Q:1-647,H:12-657^63%ID^E:0^RecName: Full=Translation initiation factor IF-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus","PF00009.24^GTP_EFTU^Elongation factor Tu GTP binding domain^483-643^E:1.9e-32`PF01926.20^MMR_HSR1^50S ribosome-binding GTPase^484-592^E:1.7e-08`PF00071.19^Ras^Ras family^484-642^E:3.2e-07",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003743^molecular_function^translation initiation factor activity","GO:0005525^molecular_function^GTP binding`GO:0007264^biological_process^small GTPase mediated signal transduction",".","."]
["TRINITY_DN38041_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.44334628410944,0,0,"TRINITY_DN38041_c0_g1_i1","MFP1_TOBAC^MFP1_TOBAC^Q:2418-292,H:27-713^47.96%ID^E:0^RecName: Full=MAR-binding filament-like protein 1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN38041_c0_g1_i1.p1","271-2460[-]","MFP1_TOBAC^MFP1_TOBAC^Q:15-723,H:27-713^47.96%ID^E:0^RecName: Full=MAR-binding filament-like protein 1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".",".",".",".",".","GO:0016363^cellular_component^nuclear matrix`GO:0003677^molecular_function^DNA binding",".",".","."]
["TRINITY_DN44972_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",4.43795847538496,0,0,"TRINITY_DN44972_c2_g4_i3","LPA1_ARATH^LPA1_ARATH^Q:906-1160,H:86-170^34.12%ID^E:2e-06^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44972_c2_g4_i3.p1","270-1232[+]","LPA1_ARATH^LPA1_ARATH^Q:209-294,H:82-167^37.21%ID^E:6e-09^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13432.3^TPR_16^Tetratricopeptide repeat^207-263^E:0.0007",".",".","ENOG410YYDP^Protein of unknown function (DUF3493)","KEGG:ath:AT1G02910","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010270^biological_process^photosystem II oxygen evolving complex assembly",".",".","."]
["TRINITY_DN43828_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",4.41871065700564,0,0,"TRINITY_DN43828_c0_g2_i1","PPL1_ARATH^PPL1_ARATH^Q:850-380,H:72-228^73.89%ID^E:1e-77^RecName: Full=PsbP-like protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43828_c0_g2_i1.p1","368-883[-]","PPL1_ARATH^PPL1_ARATH^Q:12-168,H:72-228^73.89%ID^E:6e-85^RecName: Full=PsbP-like protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01789.13^PsbP^PsbP^12-168^E:1.1e-54",".",".","ENOG4111N4V^Photosystem II oxygen evolving complex protein PsbP","KEGG:ath:AT3G55330`KO:K02717","GO:0009507^cellular_component^chloroplast`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0019898^cellular_component^extrinsic component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN44911_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.4171111336164,0,0,"TRINITY_DN44911_c0_g1_i11","HS905_ARATH^HS905_ARATH^Q:2901-1639,H:323-743^88.36%ID^E:0^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HS905_ARATH^HS905_ARATH^Q:4190-3519,H:1-215^70.04%ID^E:4e-108^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HS905_ARATH^HS905_ARATH^Q:3406-3143,H:211-298^82.95%ID^E:4e-108^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44911_c0_g1_i11.p1","1504-3093[-]","HS905_ARATH^HS905_ARATH^Q:36-529,H:297-780^82.59%ID^E:0^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00183.15^HSP90^Hsp90 protein^39-499^E:5e-182",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:ath:AT2G04030`KO:K09487","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0005774^cellular_component^vacuolar membrane`GO:0005524^molecular_function^ATP binding`GO:0009704^biological_process^de-etiolation`GO:0006457^biological_process^protein folding`GO:0045037^biological_process^protein import into chloroplast stroma`GO:0010157^biological_process^response to chlorate`GO:0009408^biological_process^response to heat`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN47426_c7_g1","leaves S. abrotanoides","roots S. abrotanoides",4.41549956798037,0,0,"TRINITY_DN47426_c7_g1_i3","PAP1_ARATH^PAP1_ARATH^Q:800-1102,H:212-312^79.21%ID^E:4e-46^RecName: Full=Probable plastid-lipid-associated protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PAP1_ARATH^PAP1_ARATH^Q:223-423,H:150-215^74.63%ID^E:5e-21^RecName: Full=Probable plastid-lipid-associated protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47426_c7_g1_i3.p2","788-1123[+]","LIPC_SOLTU^LIPC_SOLTU^Q:5-109,H:220-324^80%ID^E:2e-53^RecName: Full=Light-induced protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF04755.9^PAP_fibrillin^PAP_fibrillin^5-101^E:2.3e-26",".",".","ENOG4111PVP^negative regulation of photosynthesis, light reaction","KEGG:sot:102584168","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0006950^biological_process^response to stress",".",".","."]
["TRINITY_DN46659_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",4.41471434638561,0,0,"TRINITY_DN46659_c0_g2_i2","PAP_CITUN^PAP_CITUN^Q:429-851,H:8-168^53.09%ID^E:1e-36^RecName: Full=Plastid-lipid-associated protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus",".","TRINITY_DN46659_c0_g2_i2.p1","375-863[+]","PAP_CITUN^PAP_CITUN^Q:12-159,H:1-168^56.21%ID^E:2e-45^RecName: Full=Plastid-lipid-associated protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus","PF04755.9^PAP_fibrillin^PAP_fibrillin^89-160^E:2.5e-26",".",".",".",".","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN46218_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",4.39208057834696,0,0,"TRINITY_DN46218_c2_g4_i5","BBX24_ARATH^BBX24_ARATH^Q:448-1167,H:1-248^58.47%ID^E:5e-85^RecName: Full=B-box zinc finger protein 24 {ECO:0000303|PubMed:19920209};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46218_c2_g4_i5.p1","448-1170[+]","BBX24_ARATH^BBX24_ARATH^Q:1-240,H:1-248^58.47%ID^E:6e-89^RecName: Full=B-box zinc finger protein 24 {ECO:0000303|PubMed:19920209};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00643.21^zf-B_box^B-box zinc finger^4-44^E:1.3e-05`PF00643.21^zf-B_box^B-box zinc finger^53-95^E:2.8e-08",".",".","ENOG410YBMW^nucleic acid binding transcription factor activity","KEGG:ath:AT1G06040","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003712^molecular_function^transcription cofactor activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0080167^biological_process^response to karrikin`GO:0009416^biological_process^response to light stimulus`GO:0006351^biological_process^transcription, DNA-templated","GO:0008270^molecular_function^zinc ion binding`GO:0005622^cellular_component^intracellular",".","."]
["TRINITY_DN28558_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.37668518485807,0,0,"TRINITY_DN28558_c0_g1_i1","RR21_SPIOL^RR21_SPIOL^Q:811-707,H:1-35^88.57%ID^E:7e-13^RecName: Full=30S ribosomal protein S21, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN28558_c0_g1_i1.p1","512-1054[-]","RR21_SPIOL^RR21_SPIOL^Q:82-116,H:1-35^88.57%ID^E:1e-12^RecName: Full=30S ribosomal protein S21, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF01165.17^Ribosomal_S21^Ribosomal protein S21^89-143^E:2e-19",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN43581_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",4.34349801737071,0,0,"TRINITY_DN43581_c2_g2_i1","PDX1_HEVBR^PDX1_HEVBR^Q:354-1283,H:1-309^93.23%ID^E:0^RecName: Full=Probable pyridoxal 5'-phosphate synthase subunit PDX1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea",".","TRINITY_DN43581_c2_g2_i1.p2","354-1286[+]","PDX1_HEVBR^PDX1_HEVBR^Q:1-310,H:1-309^93.23%ID^E:0^RecName: Full=Probable pyridoxal 5'-phosphate synthase subunit PDX1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea","PF01680.14^SOR_SNZ^SOR/SNZ family^24-229^E:1.2e-111`PF05690.11^ThiG^Thiazole biosynthesis protein ThiG^206-273^E:8.4e-08",".",".",".",".","GO:0036381^molecular_function^pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity`GO:0042823^biological_process^pyridoxal phosphate biosynthetic process`GO:0042819^biological_process^vitamin B6 biosynthetic process","GO:0042819^biological_process^vitamin B6 biosynthetic process`GO:0042823^biological_process^pyridoxal phosphate biosynthetic process",".","."]
["TRINITY_DN44970_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.3142098839851,0,0,"TRINITY_DN44970_c0_g1_i5","LRKS5_ARATH^LRKS5_ARATH^Q:259-2082,H:51-647^36.16%ID^E:4e-102^RecName: Full=Probable L-type lectin-domain containing receptor kinase S.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44970_c0_g1_i5.p1","91-2109[+]","LRKS5_ARATH^LRKS5_ARATH^Q:57-664,H:51-647^36.04%ID^E:1e-128^RecName: Full=Probable L-type lectin-domain containing receptor kinase S.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00139.16^Lectin_legB^Legume lectin domain^42-279^E:2.1e-56`PF00069.22^Pkinase^Protein kinase domain^353-621^E:3.5e-48`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^355-620^E:1.5e-46",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G06740","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN28442_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.30657563469065,0,0,"TRINITY_DN28442_c0_g1_i2","RR31_ARATH^RR31_ARATH^Q:288-485,H:51-116^74.24%ID^E:5e-11^RecName: Full=30S ribosomal protein S31, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28442_c0_g1_i2.p1","144-494[+]","RR31_ARATH^RR31_ARATH^Q:49-114,H:51-116^74.24%ID^E:9e-23^RecName: Full=30S ribosomal protein S31, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17067.2^RPS31^Ribosomal protein S31e^1-97^E:9.9e-27",".",".","ENOG410XX58^Ribosomal protein","KEGG:ath:AT2G38140`KO:K19033","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0032544^biological_process^plastid translation",".",".","."]
["TRINITY_DN42835_c5_g4","leaves S. abrotanoides","roots S. abrotanoides",4.30189942724226,0,0,"TRINITY_DN42835_c5_g4_i1","RAV2_ARATH^RAV2_ARATH^Q:1059-79,H:32-352^62.54%ID^E:2e-123^RecName: Full=AP2/ERF and B3 domain-containing transcription repressor RAV2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42835_c5_g4_i1.p1","76-1122[-]","RAVL1_ARATH^RAVL1_ARATH^Q:7-348,H:8-361^60.65%ID^E:8e-136^RecName: Full=AP2/ERF and B3 domain-containing transcription repressor TEM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^55-103^E:7.3e-09`PF02362.18^B3^B3 DNA binding domain^181-280^E:2.9e-28",".",".","ENOG4110AU5^AP2 ERF and B3 domain-containing","KEGG:ath:AT1G25560`KO:K09287","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0048573^biological_process^photoperiodism, flowering`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN46819_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",4.29882731134104,0,0,"TRINITY_DN46819_c1_g1_i3","ANTR1_ARATH^ANTR1_ARATH^Q:789-151,H:1-208^58.04%ID^E:6e-61^RecName: Full=Sodium-dependent phosphate transport protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46819_c1_g1_i3.p1","103-789[-]","ANTR1_ARATH^ANTR1_ARATH^Q:1-213,H:1-208^58.04%ID^E:9e-72^RecName: Full=Sodium-dependent phosphate transport protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^114-213^E:8.1e-16",".",".","ENOG410XPWC^solute carrier family 17","KEGG:ath:AT2G29650","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009579^cellular_component^thylakoid`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0009416^biological_process^response to light stimulus`GO:0009624^biological_process^response to nematode`GO:0006814^biological_process^sodium ion transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44706_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",4.29752618807779,0,0,"TRINITY_DN44706_c4_g2_i2","14KD_DAUCA^14KD_DAUCA^Q:554-796,H:56-136^67.07%ID^E:2e-24^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN44706_c4_g2_i2.p1","428-802[+]","14KD_DAUCA^14KD_DAUCA^Q:41-123,H:54-136^67.86%ID^E:4e-29^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF14547.3^Hydrophob_seed^Hydrophobic seed protein^41-123^E:2.2e-29`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^60-123^E:4.6e-06","sigP:1^22^0.905^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN44719_c4_g5","leaves S. abrotanoides","roots S. abrotanoides",4.29511351438351,0,0,"TRINITY_DN44719_c4_g5_i1","PDRP1_ARATH^PDRP1_ARATH^Q:303-1379,H:47-403^63.89%ID^E:9e-160^RecName: Full=Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44719_c4_g5_i1.p1","156-1382[+]","PDRP1_ARATH^PDRP1_ARATH^Q:1-408,H:1-403^59.56%ID^E:6e-163^RecName: Full=Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03618.11^Kinase-PPPase^Kinase/pyrophosphorylase^121-389^E:2.4e-88",".",".","COG1806^Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation (By similarity)","KEGG:ath:AT4G21210","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0004721^molecular_function^phosphoprotein phosphatase activity`GO:0016776^molecular_function^phosphotransferase activity, phosphate group as acceptor`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006470^biological_process^protein dephosphorylation`GO:0006468^biological_process^protein phosphorylation","GO:0005524^molecular_function^ATP binding`GO:0016772^molecular_function^transferase activity, transferring phosphorus-containing groups",".","."]
["TRINITY_DN43848_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.28469971894536,0,0,"TRINITY_DN43848_c0_g1_i17","Y1669_ARATH^Y1669_ARATH^Q:1235-819,H:119-257^34.48%ID^E:1e-11^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43848_c0_g1_i17.p1","501-1244[-]","Y1669_ARATH^Y1669_ARATH^Q:4-146,H:119-261^34.9%ID^E:1e-13^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00248.18^Aldo_ket_red^Aldo/keto reductase family^1-148^E:7e-29",".",".","COG0667^Aldo keto reductase","KEGG:ath:AT1G06690","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010287^cellular_component^plastoglobule`GO:0016491^molecular_function^oxidoreductase activity",".",".","."]
["TRINITY_DN39267_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.2786284827861,0,0,"TRINITY_DN39267_c0_g1_i3","RK28_TOBAC^RK28_TOBAC^Q:1005-631,H:26-150^76%ID^E:2e-59^RecName: Full=50S ribosomal protein L28, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN39267_c0_g1_i3.p1","625-1077[-]","RK28_TOBAC^RK28_TOBAC^Q:25-149,H:26-150^76%ID^E:2e-63^RecName: Full=50S ribosomal protein L28, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00830.16^Ribosomal_L28^Ribosomal L28 family^75-133^E:3.1e-21",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome",".","."]
["TRINITY_DN46899_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.27576977500481,0,0,"TRINITY_DN46899_c0_g1_i24","PTC52_ARATH^PTC52_ARATH^Q:1211-312,H:236-557^52.17%ID^E:1e-96^RecName: Full=Protochlorophyllide-dependent translocon component 52, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46899_c0_g1_i24.p1","303-1187[-]","PTC52_ARATH^PTC52_ARATH^Q:1-292,H:244-557^51.59%ID^E:1e-107^RecName: Full=Protochlorophyllide-dependent translocon component 52, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08417.9^PaO^Pheophorbide a oxygenase^56-155^E:4.6e-27",".",".","COG4638^rieske 2fe-2S domain-containing protein","KEGG:ath:AT4G25650","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009536^cellular_component^plastid`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0010277^molecular_function^chlorophyllide a oxygenase [overall] activity`GO:0046872^molecular_function^metal ion binding`GO:0015031^biological_process^protein transport","GO:0010277^molecular_function^chlorophyllide a oxygenase [overall] activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46012_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",4.26777311632847,0,0,"TRINITY_DN46012_c0_g3_i1","SODF2_ARATH^SODF2_ARATH^Q:141-806,H:42-263^74.32%ID^E:2e-123^RecName: Full=Superoxide dismutase [Fe] 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46012_c0_g3_i1.p1","108-944[+]","SODF2_ARATH^SODF2_ARATH^Q:12-278,H:42-305^68.28%ID^E:1e-134^RecName: Full=Superoxide dismutase [Fe] 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00081.19^Sod_Fe_N^Iron/manganese superoxide dismutases, alpha-hairpin domain^27-107^E:3.7e-27`PF02777.15^Sod_Fe_C^Iron/manganese superoxide dismutases, C-terminal domain^114-232^E:7.5e-36",".",".","COG0605^Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity)","KEGG:ath:AT5G51100`KO:K04564","GO:0009507^cellular_component^chloroplast`GO:0042644^cellular_component^chloroplast nucleoid`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009295^cellular_component^nucleoid`GO:0009579^cellular_component^thylakoid`GO:0046872^molecular_function^metal ion binding`GO:0004784^molecular_function^superoxide dismutase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0019430^biological_process^removal of superoxide radicals`GO:0009411^biological_process^response to UV","GO:0004784^molecular_function^superoxide dismutase activity`GO:0046872^molecular_function^metal ion binding`GO:0006801^biological_process^superoxide metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN36026_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.24759793186386,0,0,"TRINITY_DN36026_c0_g1_i1","RRP2_SPIOL^RRP2_SPIOL^Q:288-827,H:82-260^72.22%ID^E:7e-88^RecName: Full=30S ribosomal protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN36026_c0_g1_i1.p1","90-830[+]","RRP2_SPIOL^RRP2_SPIOL^Q:67-246,H:82-260^72.22%ID^E:1e-90^RecName: Full=30S ribosomal protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^71-141^E:1.1e-19`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^172-242^E:6.1e-19`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^181-243^E:0.14",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0000166^molecular_function^nucleotide binding`GO:0019843^molecular_function^rRNA binding","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN47080_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",4.18927179281123,0,0,"TRINITY_DN47080_c3_g1_i16","CLPX3_ARATH^CLPX3_ARATH^Q:4110-2767,H:1-419^54.56%ID^E:5e-122^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPX3_ARATH^CLPX3_ARATH^Q:2176-1766,H:411-547^82.48%ID^E:2e-77^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPX3_ARATH^CLPX3_ARATH^Q:1676-1386,H:545-641^59.79%ID^E:2e-77^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47080_c3_g1_i16.p1","2728-4110[-]","CLPX3_ARATH^CLPX3_ARATH^Q:1-448,H:1-419^53.35%ID^E:2e-136^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^336-444^E:4e-31`PF07728.11^AAA_5^AAA domain (dynein-related subfamily)^339-417^E:1.4e-05`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^340-446^E:1.2e-14",".",".","COG1219^ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)","KEGG:ath:AT1G33360`KO:K03544","GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0008233^molecular_function^peptidase activity`GO:0006457^biological_process^protein folding","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN37645_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.18825370916156,0,0,"TRINITY_DN37645_c0_g1_i1","RR10_MESCR^RR10_MESCR^Q:272-679,H:58-197^84.29%ID^E:5e-80^RecName: Full=30S ribosomal protein S10, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum",".","TRINITY_DN37645_c0_g1_i1.p1","128-682[+]","RR10_MESCR^RR10_MESCR^Q:5-184,H:3-197^68.21%ID^E:2e-82^RecName: Full=30S ribosomal protein S10, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum","PF00338.19^Ribosomal_S10^Ribosomal protein S10p/S20e^89-183^E:3.2e-33",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN38586_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",4.15975096595775,"0.00150682470698653","0.00220755341883324","TRINITY_DN38586_c0_g2_i1","EPFL9_ARATH^EPFL9_ARATH^Q:206-376,H:46-102^80.7%ID^E:3e-27^RecName: Full=EPIDERMAL PATTERNING FACTOR-like protein 9 {ECO:0000303|PubMed:19435754};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38586_c0_g2_i1.p1","77-379[+]","EPFL9_ARATH^EPFL9_ARATH^Q:44-100,H:46-102^80.7%ID^E:7e-29^RecName: Full=EPIDERMAL PATTERNING FACTOR-like protein 9 {ECO:0000303|PubMed:19435754};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16851.2^Stomagen^Stomagen^51-99^E:4.5e-32","sigP:1^22^0.764^YES",".","ENOG410Z51E^NA","KEGG:ath:AT4G12970","GO:0048046^cellular_component^apoplast`GO:0019901^molecular_function^protein kinase binding`GO:0007267^biological_process^cell-cell signaling`GO:0010052^biological_process^guard cell differentiation`GO:2000123^biological_process^positive regulation of stomatal complex development`GO:2000038^biological_process^regulation of stomatal complex development`GO:0010374^biological_process^stomatal complex development`GO:0010375^biological_process^stomatal complex patterning","GO:2000123^biological_process^positive regulation of stomatal complex development",".","."]
["TRINITY_DN41916_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.15253433391342,0,0,"TRINITY_DN41916_c0_g1_i4","BAS1A_ARATH^BAS1A_ARATH^Q:1586-1347,H:71-150^88.75%ID^E:3e-54^RecName: Full=2-Cys peroxiredoxin BAS1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BAS1A_ARATH^BAS1A_ARATH^Q:1272-1147,H:149-190^92.86%ID^E:3e-54^RecName: Full=2-Cys peroxiredoxin BAS1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BAS1A_ARATH^BAS1A_ARATH^Q:517-296,H:190-263^95.95%ID^E:3e-41^RecName: Full=2-Cys peroxiredoxin BAS1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41916_c0_g1_i4.p1","1296-1991[-]","BAS1_HORVU^BAS1_HORVU^Q:124-215,H:1-95^80%ID^E:1e-45^RecName: Full=2-Cys peroxiredoxin BAS1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum","PF00578.18^AhpC-TSA^AhpC/TSA family^140-213^E:2e-21",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004601^molecular_function^peroxidase activity`GO:0051920^molecular_function^peroxiredoxin activity","GO:0016209^molecular_function^antioxidant activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45286_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",4.12413584063788,0,0,"TRINITY_DN45286_c1_g3_i2","GSTUJ_ARATH^GSTUJ_ARATH^Q:1077-760,H:1-106^78.3%ID^E:1e-77^RecName: Full=Glutathione S-transferase U19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSTUJ_ARATH^GSTUJ_ARATH^Q:679-338,H:106-219^64.91%ID^E:1e-77^RecName: Full=Glutathione S-transferase U19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45286_c1_g3_i2.p1","739-1077[-]","GSTUK_ARATH^GSTUK_ARATH^Q:1-105,H:1-105^76.19%ID^E:3e-55^RecName: Full=Glutathione S-transferase U20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^5-76^E:1e-19`PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^7-80^E:7.2e-16`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^13-76^E:1.3e-08",".",".","ENOG410XSIX^glutathione Stransferase","KEGG:ath:AT1G78370`KO:K00799","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0019899^molecular_function^enzyme binding`GO:0004364^molecular_function^glutathione transferase activity`GO:0040008^biological_process^regulation of growth`GO:2000030^biological_process^regulation of response to red or far red light`GO:0009735^biological_process^response to cytokinin`GO:0009636^biological_process^response to toxic substance`GO:0009407^biological_process^toxin catabolic process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47207_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",4.09785634878244,0,0,"TRINITY_DN47207_c2_g1_i17","DFRA_DIACA^DFRA_DIACA^Q:3037-2765,H:23-113^54.95%ID^E:5e-18^RecName: Full=Dihydroflavonol-4-reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Dianthus",".","TRINITY_DN47207_c2_g1_i17.p1","2708-3037[-]","TKPR1_ARATH^TKPR1_ARATH^Q:3-91,H:8-96^66.29%ID^E:7e-33^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^3-98^E:5.5e-10`PF05368.10^NmrA^NmrA-like family^3-79^E:8.2e-09`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^5-72^E:3.8e-08`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^5-83^E:4.7e-06`PF13460.3^NAD_binding_10^NAD(P)H-binding^7-81^E:5.7e-10",".",".","COG0451^Nad-dependent epimerase dehydratase","KEGG:ath:AT4G35420","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005634^cellular_component^nucleus`GO:0050662^molecular_function^coenzyme binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0009555^biological_process^pollen development`GO:0010584^biological_process^pollen exine formation`GO:0048316^biological_process^seed development`GO:0080110^biological_process^sporopollenin biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46012_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",4.0954415215549,0,0,"TRINITY_DN46012_c0_g2_i10","RUB1_BRANA^RUB1_BRANA^Q:2653-3666,H:198-535^86.69%ID^E:0^RecName: Full=RuBisCO large subunit-binding protein subunit alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica`RUB1_BRANA^RUB1_BRANA^Q:1983-2609,H:1-213^83.57%ID^E:2e-105^RecName: Full=RuBisCO large subunit-binding protein subunit alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN46012_c0_g2_i10.p3","2956-3723[+]","RUB1_BRANA^RUB1_BRANA^Q:1-237,H:299-535^85.65%ID^E:8e-142^RecName: Full=RuBisCO large subunit-binding protein subunit alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica","PF00118.21^Cpn60_TCP1^TCP-1/cpn60 chaperonin family^2-233^E:4e-45",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0042026^biological_process^protein refolding","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN71655_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.08834844146099,0,0,"TRINITY_DN71655_c0_g1_i1","HEM11_CUCSA^HEM11_CUCSA^Q:1937-282,H:1-552^82.07%ID^E:0^RecName: Full=Glutamyl-tRNA reductase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN71655_c0_g1_i1.p1","279-1937[-]","HEM11_CUCSA^HEM11_CUCSA^Q:1-552,H:1-552^83.72%ID^E:0^RecName: Full=Glutamyl-tRNA reductase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF05201.12^GlutR_N^Glutamyl-tRNAGlu reductase, N-terminal domain^107-257^E:9.4e-39`PF01488.17^Shikimate_DH^Shikimate / quinate 5-dehydrogenase^272-414^E:1.9e-43`PF03807.14^F420_oxidored^NADP oxidoreductase coenzyme F420-dependent^290-356^E:6.4e-06`PF00745.17^GlutR_dimer^Glutamyl-tRNAGlu reductase, dimerisation domain^428-532^E:1.7e-29",".",".",".","KEGG:csv:101220615`KO:K02492","GO:0009507^cellular_component^chloroplast`GO:0008883^molecular_function^glutamyl-tRNA reductase activity`GO:0050661^molecular_function^NADP binding`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0006782^biological_process^protoporphyrinogen IX biosynthetic process","GO:0008883^molecular_function^glutamyl-tRNA reductase activity`GO:0050661^molecular_function^NADP binding`GO:0033014^biological_process^tetrapyrrole biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45384_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",4.05584390708448,0,0,"TRINITY_DN45384_c4_g1_i23","SAC6_ARATH^SAC6_ARATH^Q:556-2313,H:6-592^75.3%ID^E:0^RecName: Full=Phosphoinositide phosphatase SAC6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45384_c4_g1_i23.p1","526-2319[+]","SAC6_ARATH^SAC6_ARATH^Q:11-596,H:6-592^75.3%ID^E:0^RecName: Full=Phosphoinositide phosphatase SAC6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02383.15^Syja_N^SacI homology domain^68-353^E:4.3e-76",".",".","COG5329^Phosphatase","KEGG:ath:AT5G66020","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0052866^molecular_function^phosphatidylinositol phosphate phosphatase activity`GO:0009651^biological_process^response to salt stress","GO:0042578^molecular_function^phosphoric ester hydrolase activity",".","."]
["TRINITY_DN73272_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",4.01319793563408,0,0,"TRINITY_DN73272_c0_g1_i1","FTRV_MAIZE^FTRV_MAIZE^Q:542-784,H:18-96^62.2%ID^E:5e-25^RecName: Full=Ferredoxin-thioredoxin reductase, variable chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN73272_c0_g1_i1.p1","287-787[+]","FTRV_MAIZE^FTRV_MAIZE^Q:86-166,H:18-96^62.2%ID^E:5e-27^RecName: Full=Ferredoxin-thioredoxin reductase, variable chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF02941.12^FeThRed_A^Ferredoxin thioredoxin reductase variable alpha chain^86-161^E:4.7e-24",".",".","COG0320^Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0016992^molecular_function^lipoate synthase activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis",".","."]
["TRINITY_DN43735_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",4.01092143553048,0,0,"TRINITY_DN43735_c1_g1_i4","C74B2_ARATH^C74B2_ARATH^Q:4465-3083,H:36-492^56.16%ID^E:1e-160^RecName: Full=Linolenate hydroperoxide lyase, chloroplastic {ECO:0000305|PubMed:9701595};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43735_c1_g1_i4.p1","3080-4522[-]","C74B2_ARATH^C74B2_ARATH^Q:20-480,H:36-492^56.16%ID^E:0^RecName: Full=Linolenate hydroperoxide lyase, chloroplastic {ECO:0000305|PubMed:9701595};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^311-463^E:2.5e-19",".",".","ENOG410YEK3^hydroperoxide lyase",".","GO:0009507^cellular_component^chloroplast`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016829^molecular_function^lyase activity`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0010597^biological_process^green leaf volatile biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45623_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",4.00552635001365,0,0,"TRINITY_DN45623_c3_g1_i2","NIA_PETHY^NIA_PETHY^Q:1986-268,H:337-909^84.15%ID^E:0^RecName: Full=Nitrate reductase [NADH];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN45623_c3_g1_i2.p1","265-1794[-]","NIA_PETHY^NIA_PETHY^Q:1-509,H:401-909^83.14%ID^E:0^RecName: Full=Nitrate reductase [NADH];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF03404.13^Mo-co_dimer^Mo-co oxidoreductase dimerisation domain^1-79^E:2.4e-30`PF00173.25^Cyt-b5^Cytochrome b5-like Heme/Steroid binding domain^139-209^E:2.1e-23`PF00970.21^FAD_binding_6^Oxidoreductase FAD-binding domain^257-363^E:7.6e-34`PF00175.18^NAD_binding_1^Oxidoreductase NAD-binding domain^383-490^E:9.3e-34",".",".",".",".","GO:0020037^molecular_function^heme binding`GO:0030151^molecular_function^molybdenum ion binding`GO:0043546^molecular_function^molybdopterin cofactor binding`GO:0009703^molecular_function^nitrate reductase (NADH) activity`GO:0050464^molecular_function^nitrate reductase (NADPH) activity`GO:0042128^biological_process^nitrate assimilation`GO:0006809^biological_process^nitric oxide biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0030151^molecular_function^molybdenum ion binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45267_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",3.98642523888313,0,0,"TRINITY_DN45267_c2_g4_i7","DB10_NICSY^DB10_NICSY^Q:3118-1532,H:7-524^73.12%ID^E:0^RecName: Full=ATP-dependent RNA helicase-like protein DB10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45267_c2_g4_i7.p1","899-3121[-]","DB10_NICSY^DB10_NICSY^Q:8-631,H:13-603^69.06%ID^E:0^RecName: Full=ATP-dependent RNA helicase-like protein DB10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00270.26^DEAD^DEAD/DEAH box helicase^175-345^E:1.8e-48`PF04851.12^ResIII^Type III restriction enzyme, res subunit^190-338^E:3.6e-05`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^382-490^E:6.2e-33",".",".",".",".","GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0003723^molecular_function^RNA binding","GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN39872_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.96511671531494,0,0,"TRINITY_DN39872_c0_g1_i1","RK15_PEA^RK15_PEA^Q:145-870,H:15-254^71.31%ID^E:4e-91^RecName: Full=50S ribosomal protein L15, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN39872_c0_g1_i1.p1","40-885[+]","RK15_PEA^RK15_PEA^Q:19-270,H:1-247^70.08%ID^E:1e-112^RecName: Full=50S ribosomal protein L15, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00828.16^Ribosomal_L27A^Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A^115-242^E:3.8e-31",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0015934^cellular_component^large ribosomal subunit`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN40823_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.96399287212368,0,0,"TRINITY_DN40823_c0_g1_i1","TRL22_ARATH^TRL22_ARATH^Q:498-740,H:67-145^66.67%ID^E:6e-29^RecName: Full=Thioredoxin-like 2-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40823_c0_g1_i1.p1","342-824[+]","TRL22_ARATH^TRL22_ARATH^Q:53-133,H:67-145^66.67%ID^E:1e-30^RecName: Full=Thioredoxin-like 2-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^97-133^E:1.4e-06",".",".","COG0526^Thioredoxin","KEGG:ath:AT4G29670","GO:0009507^cellular_component^chloroplast`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0006457^biological_process^protein folding`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN44465_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.92381644418021,0,0,"TRINITY_DN44465_c0_g1_i2","PAE12_ARATH^PAE12_ARATH^Q:2372-1197,H:27-415^70.41%ID^E:0^RecName: Full=Pectin acetylesterase 12 {ECO:0000303|PubMed:25115560};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44465_c0_g1_i2.p1","1194-2474[-]","PAE12_ARATH^PAE12_ARATH^Q:35-426,H:27-415^70.41%ID^E:0^RecName: Full=Pectin acetylesterase 12 {ECO:0000303|PubMed:25115560};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03283.10^PAE^Pectinacetylesterase^60-405^E:3.9e-162","sigP:1^19^0.827^YES",".","ENOG410XQKD^pectinacetylesterase",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0016787^molecular_function^hydrolase activity`GO:0071555^biological_process^cell wall organization","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN44106_c1_g6","leaves S. abrotanoides","roots S. abrotanoides",3.91386439377705,0,0,"TRINITY_DN44106_c1_g6_i1","ROC2_NICPL^ROC2_NICPL^Q:258-794,H:115-287^61.11%ID^E:9e-59^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC2_NICPL^ROC2_NICPL^Q:531-803,H:80-172^47.31%ID^E:5e-16^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC2_NICPL^ROC2_NICPL^Q:267-428,H:238-291^40.74%ID^E:2e-07^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44106_c1_g6_i1.p1","321-800[+]","ROC2_NICPL^ROC2_NICPL^Q:1-158,H:136-287^61.35%ID^E:7e-54^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC2_NICPL^ROC2_NICPL^Q:71-159,H:80-170^47.25%ID^E:9e-18^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^81-151^E:2.5e-21`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^97-154^E:0.23",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN43908_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",3.8958258960967,0,0,"TRINITY_DN43908_c1_g5_i1","RK27_TOBAC^RK27_TOBAC^Q:700-377,H:38-145^90.74%ID^E:4e-63^RecName: Full=50S ribosomal protein L27, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43908_c1_g5_i1.p1","239-823[-]","RK27_TOBAC^RK27_TOBAC^Q:4-176,H:1-169^78.16%ID^E:3e-84^RecName: Full=50S ribosomal protein L27, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01016.16^Ribosomal_L27^Ribosomal L27 protein^56-135^E:1.3e-36",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN47229_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.89316373699851,0,0,"TRINITY_DN47229_c0_g1_i2","USPAL_ARATH^USPAL_ARATH^Q:381-839,H:7-163^28.74%ID^E:1e-12^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47229_c0_g1_i2.p1","342-869[+]","USPAL_ARATH^USPAL_ARATH^Q:14-166,H:7-163^28.74%ID^E:6e-14^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00582.23^Usp^Universal stress protein family^13-165^E:1.7e-28",".",".","ENOG41119AN^Universal stress protein","KEGG:ath:AT3G01520","GO:0005886^cellular_component^plasma membrane`GO:0016208^molecular_function^AMP binding`GO:0006950^biological_process^response to stress","GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN44409_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",3.88603978194774,0,0,"TRINITY_DN44409_c0_g2_i2","Y1222_ARATH^Y1222_ARATH^Q:1076-285,H:77-289^61.74%ID^E:3e-93^RecName: Full=Uncharacterized protein At1g32220, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44409_c0_g2_i2.p1","261-725[-]","Y1222_ARATH^Y1222_ARATH^Q:1-153,H:143-295^74.51%ID^E:3e-82^RecName: Full=Uncharacterized protein At1g32220, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0702^epimerase dehydratase","KEGG:ath:AT1G32220","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0006979^biological_process^response to oxidative stress",".",".","."]
["TRINITY_DN47475_c5_g4","leaves S. abrotanoides","roots S. abrotanoides",3.87531024869358,0,0,"TRINITY_DN47475_c5_g4_i4","Y4230_ARATH^Y4230_ARATH^Q:733-389,H:708-823^54.31%ID^E:4e-33^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47475_c5_g4_i4.p1","302-733[-]","SD17_ARATH^SD17_ARATH^Q:1-143,H:695-843^47.65%ID^E:7e-38^RecName: Full=Receptor-like serine/threonine-protein kinase SD1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^3-96^E:3.2e-07`PF11883.5^DUF3403^Domain of unknown function (DUF3403)^99-143^E:2.8e-12",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G65790","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0071215^biological_process^cellular response to abscisic acid stimulus`GO:0006952^biological_process^defense response`GO:0046777^biological_process^protein autophosphorylation`GO:0006468^biological_process^protein phosphorylation`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0004674^molecular_function^protein serine/threonine kinase activity",".","."]
["TRINITY_DN47357_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",3.85070622882213,0,0,"TRINITY_DN47357_c0_g2_i1","RK12_NICSY^RK12_NICSY^Q:893-405,H:1-165^74.25%ID^E:3e-53^RecName: Full=50S ribosomal protein L12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47357_c0_g2_i1.p1","339-893[-]","RK12_NICSY^RK12_NICSY^Q:1-183,H:1-185^75.4%ID^E:1e-68^RecName: Full=50S ribosomal protein L12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF16320.2^Ribosomal_L12_N^Ribosomal protein L7/L12 dimerisation domain^59-106^E:9.6e-14`PF00542.16^Ribosomal_L12^Ribosomal protein L7/L12 C-terminal domain^117-183^E:8.4e-24",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN42139_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.8398443195185,0,0,"TRINITY_DN42139_c0_g1_i2","PHS2_ARATH^PHS2_ARATH^Q:3-266,H:649-736^95.45%ID^E:4e-46^RecName: Full=Alpha-glucan phosphorylase 2, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHS2_ARATH^PHS2_ARATH^Q:741-932,H:737-800^92.19%ID^E:1e-32^RecName: Full=Alpha-glucan phosphorylase 2, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42139_c0_g1_i2.p1","3-407[+]","PHS2_ARATH^PHS2_ARATH^Q:1-88,H:649-736^95.45%ID^E:2e-51^RecName: Full=Alpha-glucan phosphorylase 2, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00343.17^Phosphorylase^Carbohydrate phosphorylase^1-85^E:4.3e-43",".",".","COG0058^Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)","KEGG:ath:AT3G46970`KO:K00688","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0008184^molecular_function^glycogen phosphorylase activity`GO:0004645^molecular_function^phosphorylase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0005980^biological_process^glycogen catabolic process`GO:0046686^biological_process^response to cadmium ion`GO:0009414^biological_process^response to water deprivation","GO:0008184^molecular_function^glycogen phosphorylase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN41905_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.83749776027495,0,0,"TRINITY_DN41905_c0_g1_i1","PREP1_ARATH^PREP1_ARATH^Q:2844-526,H:308-1080^76.46%ID^E:0^RecName: Full=Presequence protease 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PREP1_ARATH^PREP1_ARATH^Q:4001-3288,H:74-308^85.29%ID^E:2e-126^RecName: Full=Presequence protease 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41905_c0_g1_i1.p1","523-2871[-]","PREP1_ARATH^PREP1_ARATH^Q:10-782,H:308-1080^76.46%ID^E:0^RecName: Full=Presequence protease 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05193.18^Peptidase_M16_C^Peptidase M16 inactive domain^10-190^E:7.2e-23`PF08367.8^M16C_assoc^Peptidase M16C associated^268-517^E:1.1e-78",".",".","COG1026^peptidase",".","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005759^cellular_component^mitochondrial matrix`GO:0005739^cellular_component^mitochondrion`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008270^molecular_function^zinc ion binding`GO:0016485^biological_process^protein processing`GO:0046686^biological_process^response to cadmium ion","GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN39120_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.75742991136126,0,0,"TRINITY_DN39120_c0_g1_i5","CPP1_NICBE^CPP1_NICBE^Q:1101-631,H:58-192^24.2%ID^E:5e-07^RecName: Full=Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic {ECO:0000303|PubMed:24151298};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN39120_c0_g1_i5.p1","583-1314[-]","CPP1_NICBE^CPP1_NICBE^Q:72-233,H:58-197^24.69%ID^E:2e-08^RecName: Full=Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic {ECO:0000303|PubMed:24151298};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF11833.5^DUF3353^Protein of unknown function (DUF3353)^85-233^E:1.4e-43",".",".",".",".","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0055035^cellular_component^plastid thylakoid membrane`GO:0044183^molecular_function^protein binding involved in protein folding`GO:0061077^biological_process^chaperone-mediated protein folding`GO:0009658^biological_process^chloroplast organization`GO:0009704^biological_process^de-etiolation`GO:0006457^biological_process^protein folding",".",".","."]
["TRINITY_DN39663_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.66603087706034,0,0,"TRINITY_DN39663_c0_g1_i1","GRS16_ARATH^GRS16_ARATH^Q:133-522,H:1-128^48.09%ID^E:8e-23^RecName: Full=Bifunctional monothiol glutaredoxin-S16, chloroplastic {ECO:0000303|PubMed:15170506};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39663_c0_g1_i1.p1","133-543[+]","GRS16_ARATH^GRS16_ARATH^Q:1-130,H:1-128^48.09%ID^E:2e-24^RecName: Full=Bifunctional monothiol glutaredoxin-S16, chloroplastic {ECO:0000303|PubMed:15170506};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0278^Glutaredoxin","KEGG:ath:AT2G38270","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0016787^molecular_function^hydrolase activity`GO:0046872^molecular_function^metal ion binding`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0006812^biological_process^cation transport`GO:0045454^biological_process^cell redox homeostasis",".",".","."]
["TRINITY_DN47625_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",3.64951446289502,0,0,"TRINITY_DN47625_c0_g2_i2","MDAR4_ARATH^MDAR4_ARATH^Q:3-1097,H:114-488^70.67%ID^E:8e-177^RecName: Full=Monodehydroascorbate reductase 4, peroxisomal {ECO:0000303|PubMed:16146528};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47625_c0_g2_i2.p1","3-1100[+]","MDAR4_ARATH^MDAR4_ARATH^Q:1-365,H:114-488^70.67%ID^E:0^RecName: Full=Monodehydroascorbate reductase 4, peroxisomal {ECO:0000303|PubMed:16146528};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^1-208^E:8e-41`PF00070.24^Pyr_redox^Pyridine nucleotide-disulphide oxidoreductase^52-132^E:5.5e-12",".",".","COG0446^pyridine nucleotide-disulfide oxidoreductase","KEGG:ath:AT3G27820`KO:K08232","GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016656^molecular_function^monodehydroascorbate reductase (NADH) activity`GO:0042744^biological_process^hydrogen peroxide catabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44010_c2_g5","leaves S. abrotanoides","roots S. abrotanoides",3.64549654130465,0,0,"TRINITY_DN44010_c2_g5_i1","CHI6_ORYSJ^CHI6_ORYSJ^Q:1041-355,H:39-271^55.13%ID^E:2e-87^RecName: Full=Chitinase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44010_c2_g5_i1.p1","352-1254[-]","CHI5_ARATH^CHI5_ARATH^Q:34-300,H:4-273^54.21%ID^E:1e-98^RecName: Full=Endochitinase EP3 {ECO:0000303|PubMed:11525512};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00182.16^Glyco_hydro_19^Chitinase class I^102-247^E:1e-43`PF00182.16^Glyco_hydro_19^Chitinase class I^255-300^E:3.8e-08",".",".","COG3979^chitinase","KEGG:ath:AT3G54420`KO:K01183","GO:0005618^cellular_component^cell wall`GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0016998^biological_process^cell wall macromolecule catabolic process`GO:0006032^biological_process^chitin catabolic process`GO:0006952^biological_process^defense response`GO:0000272^biological_process^polysaccharide catabolic process`GO:0009617^biological_process^response to bacterium`GO:0009611^biological_process^response to wounding`GO:0010262^biological_process^somatic embryogenesis","GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0016998^biological_process^cell wall macromolecule catabolic process",".","."]
["TRINITY_DN47401_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",3.63991464706704,0,0,"TRINITY_DN47401_c3_g1_i1","ISCAP_ARATH^ISCAP_ARATH^Q:642-259,H:53-180^80.47%ID^E:1e-70^RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47401_c3_g1_i1.p1","256-948[-]","ISCAP_ARATH^ISCAP_ARATH^Q:103-230,H:53-180^80.47%ID^E:3e-72^RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01521.17^Fe-S_biosyn^Iron-sulphur cluster biosynthesis^122-224^E:2.5e-22",".",".","COG0316^Iron--sulfur cluster","KEGG:ath:AT1G10500`KO:K13628","GO:0009570^cellular_component^chloroplast stroma`GO:0005759^cellular_component^mitochondrial matrix`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0008198^molecular_function^ferrous iron binding`GO:0005198^molecular_function^structural molecule activity`GO:0016226^biological_process^iron-sulfur cluster assembly`GO:0097428^biological_process^protein maturation by iron-sulfur cluster transfer`GO:0006790^biological_process^sulfur compound metabolic process",".",".","."]
["TRINITY_DN41993_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.63913244266052,0,0,"TRINITY_DN41993_c0_g1_i1","XERIC_ARATH^XERIC_ARATH^Q:184-321,H:101-146^50%ID^E:1e-09^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41993_c0_g1_i1.p1","1-435[+]","XERIC_ARATH^XERIC_ARATH^Q:62-110,H:101-149^46.94%ID^E:1e-10^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^62-106^E:4.4e-14`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^62-106^E:2.2e-07`PF17123.2^zf-RING_11^RING-like zinc finger^63-90^E:8.8e-09`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^63-105^E:1.3e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^64-105^E:1.6e-06",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT2G04240`KO:K16285","GO:0016021^cellular_component^integral component of membrane`GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009688^biological_process^abscisic acid biosynthetic process`GO:0009687^biological_process^abscisic acid metabolic process`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin`GO:0009739^biological_process^response to gibberellin`GO:0006970^biological_process^response to osmotic stress`GO:0009651^biological_process^response to salt stress","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN38781_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.61755331274778,0,0,"TRINITY_DN38781_c0_g1_i8","Y2446_ARATH^Y2446_ARATH^Q:895-1518,H:96-278^71.63%ID^E:4e-97^RecName: Full=Uncharacterized protein At2g34460, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2446_ARATH^Y2446_ARATH^Q:144-314,H:41-96^70.18%ID^E:3e-15^RecName: Full=Uncharacterized protein At2g34460, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38781_c0_g1_i8.p1","1036-1527[+]","Y2446_ARATH^Y2446_ARATH^Q:14-161,H:131-278^81.08%ID^E:2e-84^RecName: Full=Uncharacterized protein At2g34460, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13460.3^NAD_binding_10^NAD(P)H-binding^20-132^E:3.2e-27",".",".","COG0702^epimerase dehydratase","KEGG:ath:AT2G34460","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010287^cellular_component^plastoglobule",".",".","."]
["TRINITY_DN44186_c4_g4","leaves S. abrotanoides","roots S. abrotanoides",3.57694441363039,0,0,"TRINITY_DN44186_c4_g4_i2","CCD1_ARATH^CCD1_ARATH^Q:1592-609,H:10-338^77.51%ID^E:0^RecName: Full=Carotenoid 9,10(9',10')-cleavage dioxygenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CCD1_ARATH^CCD1_ARATH^Q:222-94,H:335-377^83.72%ID^E:2e-13^RecName: Full=Carotenoid 9,10(9',10')-cleavage dioxygenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44186_c4_g4_i2.p1","582-1634[-]","CCD1_ARATH^CCD1_ARATH^Q:15-342,H:10-338^77.51%ID^E:0^RecName: Full=Carotenoid 9,10(9',10')-cleavage dioxygenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03055.12^RPE65^Retinal pigment epithelial membrane protein^60-341^E:7.8e-73",".",".","COG3670^dioxygenase","KEGG:ath:AT3G63520`KO:K11159","GO:0005737^cellular_component^cytoplasm`GO:0005794^cellular_component^Golgi apparatus`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0045549^molecular_function^9-cis-epoxycarotenoid dioxygenase activity`GO:0046872^molecular_function^metal ion binding`GO:0016121^biological_process^carotene catabolic process`GO:0016118^biological_process^carotenoid catabolic process`GO:0016124^biological_process^xanthophyll catabolic process","GO:0016702^molecular_function^oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44351_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",3.57038483337071,0,0,"TRINITY_DN44351_c2_g1_i1","E13H_TOBAC^E13H_TOBAC^Q:1231-275,H:36-339^50.78%ID^E:1e-88^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44351_c2_g1_i1.p1","272-1231[-]","E13H_TOBAC^E13H_TOBAC^Q:1-319,H:36-339^53.27%ID^E:3e-97^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^2-318^E:6.1e-90",".",".",".",".","GO:0048046^cellular_component^apoplast`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44035_c10_g1","leaves S. abrotanoides","roots S. abrotanoides",3.55658638585557,0,0,"TRINITY_DN44035_c10_g1_i1","SIGA_ARATH^SIGA_ARATH^Q:375-1754,H:1-502^61.26%ID^E:4e-167^RecName: Full=RNA polymerase sigma factor sigA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44035_c10_g1_i1.p1","369-1757[+]","SIGA_ARATH^SIGA_ARATH^Q:3-462,H:1-502^62.25%ID^E:0^RecName: Full=RNA polymerase sigma factor sigA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04542.11^Sigma70_r2^Sigma-70 region 2^225-291^E:3.8e-15`PF04539.13^Sigma70_r3^Sigma-70 region 3^302-374^E:7.7e-13`PF04545.13^Sigma70_r4^Sigma-70, region 4^398-448^E:1e-10",".",".","COG0568^Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)","KEGG:ath:AT1G64860`KO:K03086","GO:0009507^cellular_component^chloroplast`GO:0003677^molecular_function^DNA binding`GO:0001053^molecular_function^plastid sigma factor activity`GO:0016987^molecular_function^sigma factor activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071482^biological_process^cellular response to light stimulus`GO:0071461^biological_process^cellular response to redox state`GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0080005^biological_process^photosystem stoichiometry adjustment`GO:2001141^biological_process^regulation of RNA biosynthetic process`GO:0006355^biological_process^regulation of transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0016987^molecular_function^sigma factor activity`GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45165_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",3.54706414323794,0,0,"TRINITY_DN45165_c1_g4_i1","NIFU1_ARATH^NIFU1_ARATH^Q:81-395,H:126-230^71.43%ID^E:8e-36^RecName: Full=NifU-like protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45165_c1_g4_i1.p1","2100-2414[-]","SWC4_ARATH^SWC4_ARATH^Q:1-103,H:194-301^44.04%ID^E:1e-19^RecName: Full=SWR1-complex protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XSA4^DNA methyltransferase 1 associated protein 1","KEGG:ath:AT2G47210`KO:K11324","GO:0035267^cellular_component^NuA4 histone acetyltransferase complex`GO:0005634^cellular_component^nucleus`GO:0000812^cellular_component^Swr1 complex`GO:0003677^molecular_function^DNA binding`GO:0003714^molecular_function^transcription corepressor activity`GO:0006338^biological_process^chromatin remodeling`GO:0006281^biological_process^DNA repair`GO:0043968^biological_process^histone H2A acetylation`GO:0043967^biological_process^histone H4 acetylation`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47105_c0_g10","leaves S. abrotanoides","roots S. abrotanoides",3.54289454781701,0,0,"TRINITY_DN47105_c0_g10_i1","RK6_ARATH^RK6_ARATH^Q:876-226,H:1-214^73.73%ID^E:4e-111^RecName: Full=50S ribosomal protein L6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47105_c0_g10_i1.p1","196-876[-]","RK6_ARATH^RK6_ARATH^Q:1-226,H:1-223^74.78%ID^E:2e-119^RecName: Full=50S ribosomal protein L6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00347.20^Ribosomal_L6^Ribosomal protein L6^56-128^E:4.9e-11`PF00347.20^Ribosomal_L6^Ribosomal protein L6^136-210^E:1.6e-20",".",".","COG0097^This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity)","KEGG:ath:AT1G05190`KO:K02933","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005840^cellular_component^ribosome`GO:0003723^molecular_function^RNA binding`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009735^biological_process^response to cytokinin`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0019843^molecular_function^rRNA binding`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46619_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",3.52367186211631,0,0,"TRINITY_DN46619_c3_g1_i13","CRWN1_ARATH^CRWN1_ARATH^Q:603-4076,H:1-1127^43.83%ID^E:0^RecName: Full=Protein CROWDED NUCLEI 1 {ECO:0000303|PubMed:24308514};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46619_c3_g1_i13.p1","603-4094[+]","CRWN1_ARATH^CRWN1_ARATH^Q:1-1163,H:1-1132^44.28%ID^E:0^RecName: Full=Protein CROWDED NUCLEI 1 {ECO:0000303|PubMed:24308514};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111KVI^Nuclear matrix constituent protein","KEGG:ath:AT1G67230","GO:0000789^cellular_component^cytoplasmic chromatin`GO:0005829^cellular_component^cytosol`GO:0005635^cellular_component^nuclear envelope`GO:0005652^cellular_component^nuclear lamina`GO:0031965^cellular_component^nuclear membrane`GO:0034399^cellular_component^nuclear periphery`GO:0005654^cellular_component^nucleoplasm`GO:0005634^cellular_component^nucleus`GO:0006997^biological_process^nucleus organization`GO:0097298^biological_process^regulation of nucleus size",".",".","."]
["TRINITY_DN43543_c6_g1","leaves S. abrotanoides","roots S. abrotanoides",3.5232098566691,0,0,"TRINITY_DN43543_c6_g1_i13","APC5_ARATH^APC5_ARATH^Q:1521-217,H:480-915^66.97%ID^E:4e-168^RecName: Full=Anaphase-promoting complex subunit 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43543_c6_g1_i13.p1","202-1608[-]","APC5_ARATH^APC5_ARATH^Q:30-464,H:480-915^67.2%ID^E:0^RecName: Full=Anaphase-promoting complex subunit 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YVZN^complex subunit","KEGG:ath:AT1G06590`KO:K03352","GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0007067^biological_process^mitotic nuclear division`GO:0016567^biological_process^protein ubiquitination",".",".","."]
["TRINITY_DN43976_c4_g4","leaves S. abrotanoides","roots S. abrotanoides",3.51654577505031,0,0,"TRINITY_DN43976_c4_g4_i1","BZP53_ARATH^BZP53_ARATH^Q:612-1025,H:1-146^52.05%ID^E:6e-42^RecName: Full=bZIP transcription factor 53 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43976_c4_g4_i1.p1","612-1028[+]","BZP53_ARATH^BZP53_ARATH^Q:1-138,H:1-146^52.05%ID^E:6e-47^RecName: Full=bZIP transcription factor 53 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07716.12^bZIP_2^Basic region leucine zipper^15-65^E:3.1e-07`PF00170.18^bZIP_1^bZIP transcription factor^17-64^E:8e-08",".",".","ENOG410YP2C^Ocs element-binding factor","KEGG:ath:AT3G62420","GO:0005634^cellular_component^nucleus`GO:0045735^molecular_function^nutrient reservoir activity`GO:0046982^molecular_function^protein heterodimerization activity`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009267^biological_process^cellular response to starvation`GO:0006971^biological_process^hypotonic response`GO:2000693^biological_process^positive regulation of seed maturation`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46808_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",3.51434667426011,0,0,"TRINITY_DN46808_c2_g2_i8","LEC2_CLAKE^LEC2_CLAKE^Q:1189-395,H:8-288^36.59%ID^E:8e-40^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN46808_c2_g2_i8.p1","386-1189[-]","LEC2_CLAKE^LEC2_CLAKE^Q:1-265,H:8-288^36.59%ID^E:4e-41^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^29-256^E:2.8e-45","sigP:1^24^0.608^YES",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN45332_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",3.50700194530715,0,0,"TRINITY_DN45332_c4_g1_i2","GCST_SOLTU^GCST_SOLTU^Q:1481-273,H:3-405^90.32%ID^E:0^RecName: Full=Aminomethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45332_c4_g1_i2.p1","264-1490[-]","GCST_SOLTU^GCST_SOLTU^Q:4-406,H:3-405^90.32%ID^E:0^RecName: Full=Aminomethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01571.18^GCV_T^Aminomethyltransferase folate-binding domain^41-296^E:3.3e-87`PF08669.8^GCV_T_C^Glycine cleavage T-protein C-terminal barrel domain^305-397^E:2.2e-22",".",".","COG0404^The glycine cleavage system catalyzes the degradation of glycine (By similarity)","KEGG:sot:102602939`KO:K00605","GO:0005739^cellular_component^mitochondrion`GO:0004047^molecular_function^aminomethyltransferase activity`GO:0008483^molecular_function^transaminase activity`GO:0006546^biological_process^glycine catabolic process",".",".","."]
["TRINITY_DN46193_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",3.47081858842445,0,0,"TRINITY_DN46193_c5_g1_i7","CH10C_ARATH^CH10C_ARATH^Q:165-938,H:1-253^71.71%ID^E:2e-118^RecName: Full=20 kDa chaperonin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46193_c5_g1_i7.p1","165-941[+]","CH10C_ARATH^CH10C_ARATH^Q:1-258,H:1-253^71.71%ID^E:7e-125^RecName: Full=20 kDa chaperonin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00166.18^Cpn10^Chaperonin 10 Kd subunit^67-156^E:6.2e-27`PF00166.18^Cpn10^Chaperonin 10 Kd subunit^165-256^E:1.5e-27",".",".","COG0234^Binds to cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (By similarity)","KEGG:ath:AT5G20720`KO:K04078","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0009579^cellular_component^thylakoid`GO:0005524^molecular_function^ATP binding`GO:0005507^molecular_function^copper ion binding`GO:1901671^biological_process^positive regulation of superoxide dismutase activity`GO:0006457^biological_process^protein folding`GO:0046686^biological_process^response to cadmium ion`GO:0009409^biological_process^response to cold","GO:0006457^biological_process^protein folding`GO:0005737^cellular_component^cytoplasm",".","."]
["TRINITY_DN43536_c8_g1","leaves S. abrotanoides","roots S. abrotanoides",3.46150231295169,0,0,"TRINITY_DN43536_c8_g1_i1","HS901_ARATH^HS901_ARATH^Q:830-177,H:460-677^92.2%ID^E:6e-111^RecName: Full=Heat shock protein 90-1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43536_c8_g1_i1.p1","108-731[-]","HS901_ARATH^HS901_ARATH^Q:1-207,H:493-700^89.42%ID^E:5e-111^RecName: Full=Heat shock protein 90-1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00183.15^HSP90^Hsp90 protein^1-204^E:1.3e-80",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:ath:AT5G52640`KO:K04079","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0009816^biological_process^defense response to bacterium, incompatible interaction`GO:0006457^biological_process^protein folding","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN46244_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",3.45156685542135,0,0,"TRINITY_DN46244_c1_g1_i1","THF1_SOLTU^THF1_SOLTU^Q:1463-870,H:35-226^71.14%ID^E:7e-95^RecName: Full=Protein THYLAKOID FORMATION1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`THF1_SOLTU^THF1_SOLTU^Q:435-244,H:224-286^81.25%ID^E:8e-22^RecName: Full=Protein THYLAKOID FORMATION1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46244_c1_g1_i1.p1","855-1553[-]","THF1_SOLTU^THF1_SOLTU^Q:1-228,H:1-226^67.66%ID^E:3e-107^RecName: Full=Protein THYLAKOID FORMATION1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF11264.5^ThylakoidFormat^Thylakoid formation protein^69-220^E:3.5e-58",".",".","ENOG4111FQD^May be involved in photosynthetic membrane biogenesis (By similarity)","KEGG:sot:102577610","GO:0009707^cellular_component^chloroplast outer membrane`GO:0009570^cellular_component^chloroplast stroma`GO:0016021^cellular_component^integral component of membrane`GO:0010207^biological_process^photosystem II assembly","GO:0010207^biological_process^photosystem II assembly`GO:0015979^biological_process^photosynthesis",".","."]
["TRINITY_DN47004_c6_g5","leaves S. abrotanoides","roots S. abrotanoides",3.44867910315718,0,0,"TRINITY_DN47004_c6_g5_i1","HSP82_TOBAC^HSP82_TOBAC^Q:1-471,H:132-288^97.45%ID^E:2e-105^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47004_c6_g5_i1.p1","1-471[+]","HSP82_TOBAC^HSP82_TOBAC^Q:1-157,H:132-288^97.45%ID^E:1e-105^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00183.15^HSP90^Hsp90 protein^1-157^E:2e-85",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN32925_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.42942391069038,0,0,"TRINITY_DN32925_c0_g1_i2","Y5392_ARATH^Y5392_ARATH^Q:844-1875,H:432-769^45.53%ID^E:2e-82^RecName: Full=Probable receptor-like protein kinase At5g39020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32925_c0_g1_i2.p1","199-1998[+]","Y5392_ARATH^Y5392_ARATH^Q:216-570,H:432-780^45.25%ID^E:1e-97^RecName: Full=Probable receptor-like protein kinase At5g39020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^289-555^E:1.8e-49`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^289-557^E:1.2e-45","sigP:1^23^0.875^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G39020","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44333_c2_g16","leaves S. abrotanoides","roots S. abrotanoides",3.42021526016002,"0.0185322442750404","0.0244468852964366","TRINITY_DN44333_c2_g16_i1","U74E1_ARATH^U74E1_ARATH^Q:463-176,H:351-449^60.61%ID^E:9e-32^RecName: Full=UDP-glycosyltransferase 74E1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44333_c2_g16_i1.p1","131-463[-]","U74C1_ARATH^U74C1_ARATH^Q:1-99,H:355-456^60.78%ID^E:6e-33^RecName: Full=UDP-glycosyltransferase 74C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^1-73^E:2.1e-07",".",".","COG1819^Transferase","KEGG:ath:AT2G31790","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN50469_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.38030840079363,0,0,"TRINITY_DN50469_c0_g1_i1","BAG5_ARATH^BAG5_ARATH^Q:1092-736,H:25-148^37.1%ID^E:1e-18^RecName: Full=BAG family molecular chaperone regulator 5, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN50469_c0_g1_i1.p1","214-1212[-]","BAG5_ARATH^BAG5_ARATH^Q:39-159,H:23-148^36.51%ID^E:9e-20^RecName: Full=BAG family molecular chaperone regulator 5, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00612.24^IQ^IQ calmodulin-binding motif^64-82^E:3.1e-05`PF02179.13^BAG^BAG domain^85-158^E:1.1e-09",".",".","ENOG410YQE8^BAG domain","KEGG:ath:AT1G12060","GO:0005739^cellular_component^mitochondrion","GO:0005515^molecular_function^protein binding`GO:0051087^molecular_function^chaperone binding",".","."]
["TRINITY_DN46931_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.37733353978966,0,0,"TRINITY_DN46931_c0_g1_i10","ISPH_ORYSJ^ISPH_ORYSJ^Q:1586-357,H:50-459^80.49%ID^E:0^RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46931_c0_g1_i10.p1","354-1742[-]","ISPH_ARATH^ISPH_ARATH^Q:1-462,H:1-466^72.81%ID^E:0^RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02401.15^LYTB^LytB protein^109-450^E:1.9e-82",".",".","COG0761^Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (By similarity)","KEGG:ath:AT4G34350`KO:K03527","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0051538^molecular_function^3 iron, 4 sulfur cluster binding`GO:0051745^molecular_function^4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity`GO:0046429^molecular_function^4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity`GO:0046872^molecular_function^metal ion binding`GO:0050992^biological_process^dimethylallyl diphosphate biosynthetic process`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","GO:0046872^molecular_function^metal ion binding`GO:0051745^molecular_function^4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway`GO:0050992^biological_process^dimethylallyl diphosphate biosynthetic process",".","."]
["TRINITY_DN46659_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",3.33895132866071,0,0,"TRINITY_DN46659_c1_g2_i6","PMGI_MESCR^PMGI_MESCR^Q:3049-1670,H:98-557^88.26%ID^E:0^RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum",".","TRINITY_DN46659_c1_g2_i6.p1","1661-2722[-]","PMGI_MESCR^PMGI_MESCR^Q:1-351,H:207-557^89.17%ID^E:0^RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum","PF06415.10^iPGM_N^BPG-independent PGAM N-terminus (iPGM_N)^2-116^E:1.1e-26`PF01676.15^Metalloenzyme^Metalloenzyme superfamily^24-339^E:7.4e-73",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0030145^molecular_function^manganese ion binding`GO:0004619^molecular_function^phosphoglycerate mutase activity`GO:0006007^biological_process^glucose catabolic process`GO:0006096^biological_process^glycolytic process","GO:0004619^molecular_function^phosphoglycerate mutase activity`GO:0030145^molecular_function^manganese ion binding`GO:0006007^biological_process^glucose catabolic process`GO:0005737^cellular_component^cytoplasm`GO:0003824^molecular_function^catalytic activity`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN45018_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",3.3030087893068,0,0,"TRINITY_DN45018_c1_g1_i5","WEB1_ARATH^WEB1_ARATH^Q:3472-1400,H:137-800^61.41%ID^E:0^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45018_c1_g1_i5.p1","1364-3976[-]","WEB1_ARATH^WEB1_ARATH^Q:205-863,H:136-804^64.09%ID^E:0^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05701.8^WEMBL^Weak chloroplast movement under blue light^222-787^E:1.5e-234",".",".","ENOG410YG1U^Pfam:DUF827","KEGG:ath:AT2G26570","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0009904^biological_process^chloroplast accumulation movement`GO:0009903^biological_process^chloroplast avoidance movement",".",".","."]
["TRINITY_DN43844_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.29385682652285,0,0,"TRINITY_DN43844_c0_g1_i1","CLPAA_SOLLC^CLPAA_SOLLC^Q:1496-3079,H:397-925^88.66%ID^E:0^RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon`CLPAA_SOLLC^CLPAA_SOLLC^Q:186-1394,H:5-405^77.78%ID^E:5e-155^RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN43844_c0_g1_i1.p1","1514-3085[+]","CLPAA_SOLLC^CLPAA_SOLLC^Q:1-522,H:403-925^89.48%ID^E:0^RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF02151.16^UVR^UvrB/uvrC motif^109-144^E:6e-09`PF00158.23^Sigma54_activat^Sigma-54 interaction domain^210-339^E:4.9e-06`PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^234-408^E:2.2e-55`PF07728.11^AAA_5^AAA domain (dynein-related subfamily)^239-360^E:9.7e-12`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^240-358^E:5.9e-08`PF10431.6^ClpB_D2-small^C-terminal, D2-small domain, of ClpB protein^415-495^E:9.1e-25",".",".","COG0542^ATP-dependent CLP protease ATP-binding subunit",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0019538^biological_process^protein metabolic process","GO:0005515^molecular_function^protein binding`GO:0005524^molecular_function^ATP binding`GO:0008134^molecular_function^transcription factor binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN45547_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",3.28429031354964,0,0,"TRINITY_DN45547_c4_g2_i11","MEX1_ORYSJ^MEX1_ORYSJ^Q:1438-443,H:68-399^69.58%ID^E:5e-132^RecName: Full=Maltose excess protein 1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45547_c4_g2_i11.p1","440-1660[-]","MEX1_ORYSJ^MEX1_ORYSJ^Q:57-406,H:57-399^67.14%ID^E:2e-146^RecName: Full=Maltose excess protein 1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".",".",".","ENOG410ZKZ6^maltose excess protein","KEGG:osa:4336889","GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0000023^biological_process^maltose metabolic process`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN46919_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",3.28229501707568,0,0,"TRINITY_DN46919_c3_g1_i12","DLO2_ARATH^DLO2_ARATH^Q:1295-783,H:156-326^44.51%ID^E:2e-34^RecName: Full=Protein DMR6-LIKE OXYGENASE 2 {ECO:0000303|PubMed:25376907};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DLO2_ARATH^DLO2_ARATH^Q:3528-3190,H:180-289^51.33%ID^E:3e-26^RecName: Full=Protein DMR6-LIKE OXYGENASE 2 {ECO:0000303|PubMed:25376907};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DLO2_ARATH^DLO2_ARATH^Q:2167-1721,H:22-159^25.97%ID^E:4e-07^RecName: Full=Protein DMR6-LIKE OXYGENASE 2 {ECO:0000303|PubMed:25376907};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46919_c3_g1_i12.p1","708-1265[-]","GAOX2_ARATH^GAOX2_ARATH^Q:1-161,H:192-350^42.86%ID^E:9e-43^RecName: Full=Gibberellin 20 oxidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^34-131^E:6e-29",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT5G51810`KO:K05282","GO:0045544^molecular_function^gibberellin 20-oxidase activity`GO:0005506^molecular_function^iron ion binding`GO:0009908^biological_process^flower development`GO:0009686^biological_process^gibberellin biosynthetic process`GO:0009739^biological_process^response to gibberellin`GO:0080167^biological_process^response to karrikin`GO:0009639^biological_process^response to red or far red light`GO:0009826^biological_process^unidimensional cell growth","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44653_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",3.26706449757562,0,0,"TRINITY_DN44653_c4_g1_i7","PCKA_CUCSA^PCKA_CUCSA^Q:2860-1358,H:8-512^82.84%ID^E:0^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis`PCKA_CUCSA^PCKA_CUCSA^Q:683-297,H:572-670^54.26%ID^E:8e-20^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis`PCKA_CUCSA^PCKA_CUCSA^Q:1289-1137,H:511-561^84.31%ID^E:1e-19^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN44653_c4_g1_i7.p1","1301-2869[-]","PCKA_CUCSA^PCKA_CUCSA^Q:4-504,H:8-512^82.84%ID^E:0^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF01293.17^PEPCK_ATP^Phosphoenolpyruvate carboxykinase^142-505^E:2.4e-161",".",".",".","KEGG:csv:101222382`KO:K01610","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0004612^molecular_function^phosphoenolpyruvate carboxykinase (ATP) activity`GO:0006094^biological_process^gluconeogenesis","GO:0004612^molecular_function^phosphoenolpyruvate carboxykinase (ATP) activity`GO:0005524^molecular_function^ATP binding`GO:0006094^biological_process^gluconeogenesis",".","."]
["TRINITY_DN45410_c7_g1","leaves S. abrotanoides","roots S. abrotanoides",3.26504280367957,0,0,"TRINITY_DN45410_c7_g1_i1","HSP82_TOBAC^HSP82_TOBAC^Q:3-854,H:188-471^95.77%ID^E:9e-158^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45410_c7_g1_i1.p1","3-947[+]","HS901_ARATH^HS901_ARATH^Q:1-314,H:388-700^91.4%ID^E:0^RecName: Full=Heat shock protein 90-1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00183.15^HSP90^Hsp90 protein^1-307^E:3.1e-137",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:ath:AT5G52640`KO:K04079","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0009816^biological_process^defense response to bacterium, incompatible interaction`GO:0006457^biological_process^protein folding","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN47273_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",3.24653874075168,0,0,"TRINITY_DN47273_c1_g1_i4","TRB1_ARATH^TRB1_ARATH^Q:140-847,H:1-237^62.5%ID^E:8e-92^RecName: Full=Telomere repeat-binding factor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47273_c1_g1_i4.p1","140-1048[+]","TRB1_ARATH^TRB1_ARATH^Q:1-298,H:1-299^65.56%ID^E:2e-101^RecName: Full=Telomere repeat-binding factor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^5-55^E:3.4e-09`PF00538.16^Linker_histone^linker histone H1 and H5 family^125-182^E:2.6e-08",".",".","ENOG4111SQS^single myb histone","KEGG:ath:AT1G49950`KO:K09422","GO:0000785^cellular_component^chromatin`GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003691^molecular_function^double-stranded telomeric DNA binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006334^biological_process^nucleosome assembly`GO:0009737^biological_process^response to abscisic acid`GO:0009733^biological_process^response to auxin`GO:0046686^biological_process^response to cadmium ion`GO:0009723^biological_process^response to ethylene`GO:0009739^biological_process^response to gibberellin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0009651^biological_process^response to salt stress`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN46156_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",3.23333623394946,0,0,"TRINITY_DN46156_c1_g1_i7","HSP7S_PEA^HSP7S_PEA^Q:2639-468,H:41-666^75.83%ID^E:0^RecName: Full=Stromal 70 kDa heat shock-related protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN46156_c1_g1_i7.p1","1719-2660[-]","HSP7S_PEA^HSP7S_PEA^Q:8-307,H:41-295^75.33%ID^E:4e-144^RecName: Full=Stromal 70 kDa heat shock-related protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00012.17^HSP70^Hsp70 protein^53-251^E:1.7e-93`PF06723.10^MreB_Mbl^MreB/Mbl protein^140-251^E:8.5e-09`PF00012.17^HSP70^Hsp70 protein^281-308^E:3.6e-08",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding","GO:0000902^biological_process^cell morphogenesis",".","."]
["TRINITY_DN45325_c1_g8","leaves S. abrotanoides","roots S. abrotanoides",3.22026627673685,0,0,"TRINITY_DN45325_c1_g8_i2","CLPS1_ARATH^CLPS1_ARATH^Q:972-1382,H:21-159^76.26%ID^E:1e-67^RecName: Full=ATP-dependent Clp protease adapter protein CLPS1, chloroplastic {ECO:0000303|Ref.6};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45325_c1_g8_i2.p1","1023-1385[+]","CLPS1_ARATH^CLPS1_ARATH^Q:6-120,H:45-159^85.22%ID^E:6e-71^RecName: Full=ATP-dependent Clp protease adapter protein CLPS1, chloroplastic {ECO:0000303|Ref.6};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02617.14^ClpS^ATP-dependent Clp protease adaptor protein ClpS^40-106^E:5.3e-19",".",".","COG2127^protein catabolic process","KO:K06891","GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0008233^molecular_function^peptidase activity`GO:0030163^biological_process^protein catabolic process","GO:0030163^biological_process^protein catabolic process",".","."]
["TRINITY_DN45717_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",3.18350761214029,0,0,"TRINITY_DN45717_c3_g2_i1","STEP1_ARATH^STEP1_ARATH^Q:353-655,H:46-146^68.32%ID^E:1e-25^RecName: Full=Stress enhanced protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45717_c3_g2_i1.p1","239-658[+]","STEP1_ARATH^STEP1_ARATH^Q:39-139,H:46-146^68.32%ID^E:4e-39^RecName: Full=Stress enhanced protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Y6IC^stress enhanced protein 1","KEGG:ath:AT4G34190","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0071486^biological_process^cellular response to high light intensity`GO:0071492^biological_process^cellular response to UV-A`GO:0015979^biological_process^photosynthesis`GO:0009644^biological_process^response to high light intensity`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN41670_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.17323778836603,0,0,"TRINITY_DN41670_c0_g1_i3","PPOC_TOBAC^PPOC_TOBAC^Q:1513-260,H:48-463^77.62%ID^E:0^RecName: Full=Protoporphyrinogen oxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN41670_c0_g1_i3.p1","254-1633[-]","PPOC_TOBAC^PPOC_TOBAC^Q:10-458,H:1-463^72.16%ID^E:0^RecName: Full=Protoporphyrinogen oxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF13450.3^NAD_binding_8^NAD(P)-binding Rossmann-like domain^69-126^E:1.5e-10`PF01593.21^Amino_oxidase^Flavin containing amine oxidoreductase^74-443^E:4.2e-70",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004729^molecular_function^oxygen-dependent protoporphyrinogen oxidase activity`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0006782^biological_process^protoporphyrinogen IX biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44079_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",3.16100499208689,0,0,"TRINITY_DN44079_c4_g1_i6","CIA30_ARATH^CIA30_ARATH^Q:1048-1590,H:32-223^25.25%ID^E:1e-09^RecName: Full=Probable complex I intermediate-associated protein 30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44079_c4_g1_i6.p1","274-1668[+]","CIA30_ARATH^CIA30_ARATH^Q:259-439,H:32-223^25.76%ID^E:5e-10^RecName: Full=Probable complex I intermediate-associated protein 30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05368.10^NmrA^NmrA-like family^131-202^E:1.5e-08`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^131-204^E:2.3e-06`PF02254.15^TrkA_N^TrkA-N domain^132-199^E:5.6e-06`PF13460.3^NAD_binding_10^NAD(P)H-binding^135-251^E:8.6e-11`PF08547.9^CIA30^Complex I intermediate-associated protein 30 (CIA30)^273-434^E:3e-43",".",".","ENOG410XQPB^Complex I",".","GO:0005739^cellular_component^mitochondrion","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0006813^biological_process^potassium ion transport",".","."]
["TRINITY_DN46907_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",3.13940435271385,0,0,"TRINITY_DN46907_c2_g1_i3","TIL_ARATH^TIL_ARATH^Q:1503-958,H:5-186^81.87%ID^E:9e-97^RecName: Full=Temperature-induced lipocalin-1 {ECO:0000303|PubMed:18671872};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46907_c2_g1_i3.p1","955-1512[-]","TIL_ARATH^TIL_ARATH^Q:4-185,H:5-186^81.87%ID^E:3e-112^RecName: Full=Temperature-induced lipocalin-1 {ECO:0000303|PubMed:18671872};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08212.9^Lipocalin_2^Lipocalin-like domain^12-159^E:6.3e-54`PF00061.20^Lipocalin^Lipocalin / cytosolic fatty-acid binding protein family^18-161^E:2.2e-07",".",".","COG3040^Outer membrane lipoprotein","KEGG:ath:AT5G58070`KO:K03098","GO:0009941^cellular_component^chloroplast envelope`GO:0031969^cellular_component^chloroplast membrane`GO:0005737^cellular_component^cytoplasm`GO:0009898^cellular_component^cytoplasmic side of plasma membrane`GO:0005783^cellular_component^endoplasmic reticulum`GO:0005794^cellular_component^Golgi apparatus`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0045735^molecular_function^nutrient reservoir activity`GO:0005215^molecular_function^transporter activity`GO:0030644^biological_process^cellular chloride ion homeostasis`GO:0006883^biological_process^cellular sodium ion homeostasis`GO:0010286^biological_process^heat acclimation`GO:0042538^biological_process^hyperosmotic salinity response`GO:0006629^biological_process^lipid metabolic process`GO:1902884^biological_process^positive regulation of response to oxidative stress`GO:1901002^biological_process^positive regulation of response to salt stress`GO:0009409^biological_process^response to cold`GO:0009735^biological_process^response to cytokinin`GO:0050826^biological_process^response to freezing`GO:0009408^biological_process^response to heat`GO:0009644^biological_process^response to high light intensity`GO:0009416^biological_process^response to light stimulus`GO:1901562^biological_process^response to paraquat`GO:0009414^biological_process^response to water deprivation`GO:0010431^biological_process^seed maturation",".",".","."]
["TRINITY_DN38772_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.13618016669093,0,0,"TRINITY_DN38772_c0_g1_i3","IPYR6_ARATH^IPYR6_ARATH^Q:203-982,H:40-299^82.31%ID^E:1e-157^RecName: Full=Soluble inorganic pyrophosphatase 6, chloroplastic {ECO:0000303|PubMed:15135060};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38772_c0_g1_i3.p1","107-988[+]","IPYR6_ARATH^IPYR6_ARATH^Q:33-292,H:40-299^82.31%ID^E:1e-159^RecName: Full=Soluble inorganic pyrophosphatase 6, chloroplastic {ECO:0000303|PubMed:15135060};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00719.16^Pyrophosphatase^Inorganic pyrophosphatase^100-277^E:1.3e-47",".",".","COG0221^Pyrophosphate phospho-hydrolase","KEGG:ath:AT5G09650`KO:K01507","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0009579^cellular_component^thylakoid`GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0042742^biological_process^defense response to bacterium`GO:0006796^biological_process^phosphate-containing compound metabolic process`GO:0046686^biological_process^response to cadmium ion`GO:0009651^biological_process^response to salt stress","GO:0000287^molecular_function^magnesium ion binding`GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0006796^biological_process^phosphate-containing compound metabolic process`GO:0005737^cellular_component^cytoplasm",".","."]
["TRINITY_DN44759_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",3.13065280427989,0,0,"TRINITY_DN44759_c2_g1_i4","IM30_PEA^IM30_PEA^Q:1199-1525,H:207-322^73.28%ID^E:4e-59^RecName: Full=Membrane-associated 30 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`IM30_PEA^IM30_PEA^Q:963-1115,H:157-207^90.2%ID^E:4e-59^RecName: Full=Membrane-associated 30 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`IM30_PEA^IM30_PEA^Q:325-738,H:26-158^66.91%ID^E:1e-53^RecName: Full=Membrane-associated 30 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44759_c2_g1_i4.p3","1223-1531[+]","IM30_ORYSJ^IM30_ORYSJ^Q:1-102,H:212-317^75.47%ID^E:3e-45^RecName: Full=Probable membrane-associated 30 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".",".",".","COG1842^Phage shock protein A","KEGG:osa:4324967`KO:K03969","GO:0009706^cellular_component^chloroplast inner membrane`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009508^cellular_component^plastid chromosome`GO:0010027^biological_process^thylakoid membrane organization`GO:0016050^biological_process^vesicle organization`GO:0016032^biological_process^viral process",".",".","."]
["TRINITY_DN20075_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",3.12018545800277,0,0,"TRINITY_DN20075_c0_g1_i1","AAED1_ARATH^AAED1_ARATH^Q:1018-326,H:24-247^32.49%ID^E:1e-26^RecName: Full=Thioredoxin-like protein AAED1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN20075_c0_g1_i1.p1","308-1081[-]","AAED1_ARATH^AAED1_ARATH^Q:22-252,H:24-247^32.49%ID^E:2e-27^RecName: Full=Thioredoxin-like protein AAED1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00578.18^AhpC-TSA^AhpC/TSA family^79-181^E:4.8e-08`PF13911.3^AhpC-TSA_2^AhpC/TSA antioxidant enzyme^120-237^E:5.8e-22",".",".","ENOG410XVW9^AhpC/TSA family","KEGG:ath:AT2G37240","GO:0009507^cellular_component^chloroplast","GO:0016209^molecular_function^antioxidant activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47056_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",3.09117219721335,0,0,"TRINITY_DN47056_c3_g1_i4","HSP11_SOYBN^HSP11_SOYBN^Q:513-70,H:1-153^76.47%ID^E:1e-68^RecName: Full=17.3 kDa class I heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN47056_c3_g1_i4.p1","67-513[-]","HSP11_SOYBN^HSP11_SOYBN^Q:1-148,H:1-153^76.47%ID^E:6e-78^RecName: Full=17.3 kDa class I heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF04969.13^CS^CS domain^42-109^E:0.042`PF00011.18^HSP20^Hsp20/alpha crystallin family^44-147^E:1e-31",".",".","COG0071^response to heat","KEGG:gmx:100526870`KO:K13993","GO:0005737^cellular_component^cytoplasm",".",".","."]
["TRINITY_DN45432_c6_g1","leaves S. abrotanoides","roots S. abrotanoides",3.06321091028636,"0.000315037768755974","0.000486585775951539","TRINITY_DN45432_c6_g1_i17","COPIA_DROME^COPIA_DROME^Q:73-522,H:1224-1374^34.64%ID^E:2e-17^RecName: Full=Copia protein;^Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora",".","TRINITY_DN45432_c6_g1_i17.p1","19-324[+]","POLX_TOBAC^POLX_TOBAC^Q:19-96,H:1154-1230^41.03%ID^E:7e-10^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration",".",".","."]
["TRINITY_DN44595_c4_g4","leaves S. abrotanoides","roots S. abrotanoides",3.05904934897005,0,0,"TRINITY_DN44595_c4_g4_i2","AAPC_CENCI^AAPC_CENCI^Q:820-230,H:100-312^31.48%ID^E:2e-18^RecName: Full=Putative glucose-6-phosphate 1-epimerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Cenchrus",".","TRINITY_DN44595_c4_g4_i2.p1","227-871[-]","AAPC_CENCI^AAPC_CENCI^Q:18-214,H:100-312^31.48%ID^E:7e-20^RecName: Full=Putative glucose-6-phosphate 1-epimerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Cenchrus","PF01263.17^Aldose_epim^Aldose 1-epimerase^17-207^E:1.2e-23",".",".",".",".","GO:0030246^molecular_function^carbohydrate binding`GO:0047938^molecular_function^glucose-6-phosphate 1-epimerase activity`GO:0005975^biological_process^carbohydrate metabolic process","GO:0016853^molecular_function^isomerase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44999_c3_g6","leaves S. abrotanoides","roots S. abrotanoides",3.00702905732042,0,0,"TRINITY_DN44999_c3_g6_i1","DIRL1_ARATH^DIRL1_ARATH^Q:202-426,H:28-102^50.67%ID^E:4e-16^RecName: Full=Putative lipid-transfer protein DIR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44999_c3_g6_i1.p1","1-429[+]","DIRL1_ARATH^DIRL1_ARATH^Q:68-142,H:28-102^50.67%ID^E:7e-19^RecName: Full=Putative lipid-transfer protein DIR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^67-142^E:1.8e-06`PF14368.3^LTP_2^Probable lipid transfer^74-142^E:1.9e-10",".",".","ENOG410YXDY^Lipid-transfer protein","KEGG:ath:AT5G48485","GO:0048046^cellular_component^apoplast`GO:0005783^cellular_component^endoplasmic reticulum`GO:0009506^cellular_component^plasmodesma`GO:0005504^molecular_function^fatty acid binding`GO:0043621^molecular_function^protein self-association`GO:0008270^molecular_function^zinc ion binding`GO:0006869^biological_process^lipid transport`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway",".",".","."]
["TRINITY_DN46801_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",3.00211193057275,0,0,"TRINITY_DN46801_c0_g6_i2","BSPA_POPDE^BSPA_POPDE^Q:2086-1772,H:29-136^36.11%ID^E:2e-13^RecName: Full=Bark storage protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus",".","TRINITY_DN46801_c0_g6_i2.p1","1733-2209[-]","BSPA_POPDE^BSPA_POPDE^Q:42-146,H:29-136^36.11%ID^E:2e-15^RecName: Full=Bark storage protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus","PF01048.17^PNP_UDP_1^Phosphorylase superfamily^42-137^E:9.5e-20","sigP:1^22^0.603^YES",".",".",".","GO:0003824^molecular_function^catalytic activity`GO:0045735^molecular_function^nutrient reservoir activity`GO:0009116^biological_process^nucleoside metabolic process","GO:0003824^molecular_function^catalytic activity`GO:0009116^biological_process^nucleoside metabolic process",".","."]
["TRINITY_DN43575_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",2.92572547624507,0,0,"TRINITY_DN43575_c1_g2_i14","NUDT8_ARATH^NUDT8_ARATH^Q:1508-1894,H:226-294^41.09%ID^E:2e-22^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:1327-1416,H:200-229^60%ID^E:2e-22^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:2031-2246,H:294-365^61.11%ID^E:5e-21^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:849-989,H:157-204^70.83%ID^E:2e-14^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:458-706,H:70-156^56.18%ID^E:2e-10^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43575_c1_g2_i14.p1","332-748[+]","NUDT8_ARATH^NUDT8_ARATH^Q:43-125,H:70-156^56.18%ID^E:7e-24^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Z4GH^nudix (nucleoside diphosphate linked moiety X)-type motif 6","KEGG:ath:AT5G47240","GO:0016787^molecular_function^hydrolase activity`GO:0046872^molecular_function^metal ion binding`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN41903_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.9198693350316,0,0,"TRINITY_DN41903_c0_g1_i3","GLYR1_ARATH^GLYR1_ARATH^Q:223-639,H:2-140^82.73%ID^E:5e-71^RecName: Full=Glyoxylate/succinic semialdehyde reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLYR1_ARATH^GLYR1_ARATH^Q:981-1427,H:140-288^80.54%ID^E:5e-56^RecName: Full=Glyoxylate/succinic semialdehyde reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41903_c0_g1_i3.p1","217-672[+]","GLYR1_ARATH^GLYR1_ARATH^Q:3-141,H:2-140^82.73%ID^E:2e-76^RecName: Full=Glyoxylate/succinic semialdehyde reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03446.12^NAD_binding_2^NAD binding domain of 6-phosphogluconate dehydrogenase^3-141^E:1.3e-36`PF02558.13^ApbA^Ketopantoate reductase PanE/ApbA^4-59^E:2.8e-05`PF03807.14^F420_oxidored^NADP oxidoreductase coenzyme F420-dependent^4-58^E:0.00018",".",".","COG2084^Dehydrogenase","KEGG:ath:AT3G25530`KO:K18121","GO:0005829^cellular_component^cytosol`GO:0003858^molecular_function^3-hydroxybutyrate dehydrogenase activity`GO:0030267^molecular_function^glyoxylate reductase (NADP) activity`GO:0051287^molecular_function^NAD binding`GO:0004616^molecular_function^phosphogluconate dehydrogenase (decarboxylating) activity`GO:0006979^biological_process^response to oxidative stress","GO:0004616^molecular_function^phosphogluconate dehydrogenase (decarboxylating) activity`GO:0055114^biological_process^oxidation-reduction process`GO:0008677^molecular_function^2-dehydropantoate 2-reductase activity",".","."]
["TRINITY_DN45987_c2_g7","leaves S. abrotanoides","roots S. abrotanoides",2.91382898175068,"0.000349943055360156","0.000538393787971398","TRINITY_DN45987_c2_g7_i1","Y1465_ARATH^Y1465_ARATH^Q:1042-524,H:39-214^24.86%ID^E:1e-08^RecName: Full=Late embryogenesis abundant protein At1g64065 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45987_c2_g7_i1.p1","521-1177[-]","Y1465_ARATH^Y1465_ARATH^Q:10-218,H:7-214^27.93%ID^E:3e-14^RecName: Full=Late embryogenesis abundant protein At1g64065 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03168.10^LEA_2^Late embryogenesis abundant protein^106-202^E:1.3e-11",".",".","ENOG4111AY7^Late embryogenesis abundant protein","KEGG:ath:AT1G64065","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN45149_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",2.88200904754417,0,0,"TRINITY_DN45149_c1_g1_i4","RUBB_PEA^RUBB_PEA^Q:957-2501,H:34-488^78.83%ID^E:0^RecName: Full=RuBisCO large subunit-binding protein subunit beta, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`RUBB_PEA^RUBB_PEA^Q:2644-2934,H:487-550^62.89%ID^E:3e-23^RecName: Full=RuBisCO large subunit-binding protein subunit beta, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`RUBB_PEA^RUBB_PEA^Q:3211-3339,H:549-591^88.37%ID^E:1e-09^RecName: Full=RuBisCO large subunit-binding protein subunit beta, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN45149_c1_g1_i4.p1","816-2150[+]","RUBB_BRANA^RUBB_BRANA^Q:1-443,H:1-435^81.57%ID^E:0^RecName: Full=RuBisCO large subunit-binding protein subunit beta, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica","PF00118.21^Cpn60_TCP1^TCP-1/cpn60 chaperonin family^86-399^E:3.3e-59",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0042026^biological_process^protein refolding","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN47315_c2_g5","leaves S. abrotanoides","roots S. abrotanoides",2.82142477607406,0,0,"TRINITY_DN47315_c2_g5_i2","APR3_ARATH^APR3_ARATH^Q:1335-2351,H:117-455^81.12%ID^E:0^RecName: Full=5'-adenylylsulfate reductase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`APR3_ARATH^APR3_ARATH^Q:574-672,H:84-116^87.88%ID^E:6e-08^RecName: Full=5'-adenylylsulfate reductase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47315_c2_g5_i2.p1","1314-2363[+]","APR3_ARATH^APR3_ARATH^Q:8-346,H:117-455^81.12%ID^E:0^RecName: Full=5'-adenylylsulfate reductase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01507.16^PAPS_reduct^Phosphoadenosine phosphosulfate reductase family^7-183^E:4.2e-43`PF00085.17^Thioredoxin^Thioredoxin^253-346^E:9.9e-10",".",".","COG0175^Reduction of activated sulfate into sulfite (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0033741^molecular_function^adenylyl-sulfate reductase (glutathione) activity`GO:0009973^molecular_function^adenylyl-sulfate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0045454^biological_process^cell redox homeostasis`GO:0019344^biological_process^cysteine biosynthetic process`GO:0000103^biological_process^sulfate assimilation`GO:0019419^biological_process^sulfate reduction","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN46024_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",2.80984291912836,0,0,"TRINITY_DN46024_c0_g2_i2","C71DF_MENPI^C71DF_MENPI^Q:163-1056,H:1-294^58.39%ID^E:1e-161^RecName: Full=Cytochrome P450 71D15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha`C71DF_MENPI^C71DF_MENPI^Q:1164-1763,H:295-494^63%ID^E:1e-161^RecName: Full=Cytochrome P450 71D15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN46024_c0_g2_i2.p1","1-1080[+]","C71DF_MENPI^C71DF_MENPI^Q:55-352,H:1-294^58.39%ID^E:1e-120^RecName: Full=Cytochrome P450 71D15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF00067.19^p450^Cytochrome P450^94-351^E:3.3e-31",".",".",".","KEGG:ag:AAD44152`KO:K15089","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0018674^molecular_function^(S)-limonene 3-monooxygenase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0055114^biological_process^oxidation-reduction process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45628_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",2.78794523714985,0,0,"TRINITY_DN45628_c3_g1_i2","APX3_ARATH^APX3_ARATH^Q:89-442,H:1-118^80.51%ID^E:1e-58^RecName: Full=L-ascorbate peroxidase 3, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`APX3_ARATH^APX3_ARATH^Q:1067-1510,H:135-283^82.55%ID^E:4e-52^RecName: Full=L-ascorbate peroxidase 3, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45628_c3_g1_i2.p2","1061-1525[+]","APX3_ARATH^APX3_ARATH^Q:3-154,H:135-287^82.35%ID^E:2e-74^RecName: Full=L-ascorbate peroxidase 3, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^4-92^E:2.6e-18",".",".","COG0376^Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (By similarity)","KEGG:ath:AT4G35000`KO:K00434","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0046861^cellular_component^glyoxysomal membrane`GO:0009514^cellular_component^glyoxysome`GO:0016021^cellular_component^integral component of membrane`GO:0005739^cellular_component^mitochondrion`GO:0005778^cellular_component^peroxisomal membrane`GO:0005777^cellular_component^peroxisome`GO:0009506^cellular_component^plasmodesma`GO:0009536^cellular_component^plastid`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0020037^molecular_function^heme binding`GO:0016688^molecular_function^L-ascorbate peroxidase activity`GO:0046872^molecular_function^metal ion binding`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0009735^biological_process^response to cytokinin`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN41748_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.75845056932076,0,0,"TRINITY_DN41748_c0_g1_i2","DHSO_ARATH^DHSO_ARATH^Q:886-209,H:139-364^81.42%ID^E:4e-127^RecName: Full=Sorbitol dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DHSO_ARATH^DHSO_ARATH^Q:1519-1211,H:40-142^89.32%ID^E:2e-59^RecName: Full=Sorbitol dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41748_c0_g1_i2.p1","206-814[-]","DHSO_ARATH^DHSO_ARATH^Q:1-202,H:163-364^81.19%ID^E:5e-116^RecName: Full=Sorbitol dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^30-160^E:9e-21`PF13602.3^ADH_zinc_N_2^Zinc-binding dehydrogenase^63-195^E:9.4e-08",".",".","COG1063^Dehydrogenase","KEGG:ath:AT5G51970`KO:K00008","GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0031966^cellular_component^mitochondrial membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0003939^molecular_function^L-iditol 2-dehydrogenase activity`GO:0008270^molecular_function^zinc ion binding","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46595_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",2.74006013705122,0,0,"TRINITY_DN46595_c4_g1_i2","CYSKP_SOLTU^CYSKP_SOLTU^Q:1569-385,H:1-385^77.44%ID^E:0^RecName: Full=Cysteine synthase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46595_c4_g1_i2.p1","379-1569[-]","CYSKP_SOLTU^CYSKP_SOLTU^Q:1-395,H:1-385^78.59%ID^E:0^RecName: Full=Cysteine synthase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00291.22^PALP^Pyridoxal-phosphate dependent enzyme^83-368^E:9.1e-68",".",".","COG0031^cysteine biosynthetic process from serine",".","GO:0009570^cellular_component^chloroplast stroma`GO:0009509^cellular_component^chromoplast`GO:0004124^molecular_function^cysteine synthase activity`GO:0016740^molecular_function^transferase activity`GO:0006535^biological_process^cysteine biosynthetic process from serine",".",".","."]
["TRINITY_DN43874_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.7304304445682,0,0,"TRINITY_DN43874_c0_g1_i4","CCA11_ARATH^CCA11_ARATH^Q:4130-3156,H:20-309^55.79%ID^E:4e-139^RecName: Full=Cyclin-A1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CCA11_ARATH^CCA11_ARATH^Q:2904-2719,H:333-394^80.65%ID^E:4e-139^RecName: Full=Cyclin-A1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CCA11_ARATH^CCA11_ARATH^Q:2705-2562,H:398-444^60.42%ID^E:4e-139^RecName: Full=Cyclin-A1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CCA11_ARATH^CCA11_ARATH^Q:3076-2999,H:308-333^88.46%ID^E:4e-139^RecName: Full=Cyclin-A1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CCA11_ARATH^CCA11_ARATH^Q:2497-2435,H:439-459^66.67%ID^E:4e-139^RecName: Full=Cyclin-A1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43874_c0_g1_i4.p2","3108-4172[-]","CCA11_ARATH^CCA11_ARATH^Q:15-339,H:20-309^56.4%ID^E:3e-108^RecName: Full=Cyclin-A1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^227-339^E:1e-38",".",".","COG5024^g2 mitotic-specific","KEGG:ath:AT1G44110`KO:K06627","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division",".",".","."]
["TRINITY_DN37364_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.72721520883455,0,0,"TRINITY_DN37364_c0_g1_i2","HS22M_PEA^HS22M_PEA^Q:757-1179,H:60-202^62.24%ID^E:7e-51^RecName: Full=Heat shock 22 kDa protein, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN37364_c0_g1_i2.p1","784-1182[+]","HS22M_PEA^HS22M_PEA^Q:1-132,H:69-202^65.67%ID^E:3e-54^RecName: Full=Heat shock 22 kDa protein, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00011.18^HSP20^Hsp20/alpha crystallin family^36-130^E:3.8e-18`PF04969.13^CS^CS domain^39-86^E:0.47",".",".",".",".","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN44373_c7_g2","leaves S. abrotanoides","roots S. abrotanoides",2.72336145705698,0,0,"TRINITY_DN44373_c7_g2_i4","CLPR1_ARATH^CLPR1_ARATH^Q:819-505,H:271-374^70.48%ID^E:7e-29^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44373_c7_g2_i4.p1","454-810[-]","CLPR1_ARATH^CLPR1_ARATH^Q:6-118,H:279-387^70.8%ID^E:3e-46^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00574.20^CLP_protease^Clp protease^18-81^E:2.4e-12",".",".","COG0740^Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)","KEGG:ath:AT1G49970`KO:K01358","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009840^cellular_component^chloroplastic endopeptidase Clp complex`GO:0009532^cellular_component^plastid stroma`GO:0004252^molecular_function^serine-type endopeptidase activity",".",".","."]
["TRINITY_DN46603_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.71986053803265,0,0,"TRINITY_DN46603_c0_g1_i1","ACCO3_PETHY^ACCO3_PETHY^Q:225-1133,H:1-306^85.95%ID^E:1e-177^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN46603_c0_g1_i1.p1","225-1175[+]","ACCO3_PETHY^ACCO3_PETHY^Q:1-303,H:1-306^85.95%ID^E:0^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^5-92^E:7.3e-14`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^159-253^E:3.7e-27",".",".",".",".","GO:0009815^molecular_function^1-aminocyclopropane-1-carboxylate oxidase activity`GO:0031418^molecular_function^L-ascorbic acid binding`GO:0046872^molecular_function^metal ion binding`GO:0009693^biological_process^ethylene biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44531_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",2.65069618977023,0,0,"TRINITY_DN44531_c4_g1_i6","CYSP3_SOLLC^CYSP3_SOLLC^Q:77-979,H:1-299^71.76%ID^E:6e-144^RecName: Full=Cysteine proteinase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon`CYSP3_SOLLC^CYSP3_SOLLC^Q:1089-1259,H:300-356^91.23%ID^E:6e-144^RecName: Full=Cysteine proteinase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44531_c4_g1_i6.p1","77-988[+]","CYSP3_SOLLC^CYSP3_SOLLC^Q:1-301,H:1-299^71.76%ID^E:1e-157^RecName: Full=Cysteine proteinase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^59-115^E:1.7e-16`PF00112.20^Peptidase_C1^Papain family cysteine protease^141-298^E:1.4e-50","sigP:1^21^0.87^YES",".","COG4870^cathepsin","KEGG:sly:101252505`KO:K01366","GO:0005615^cellular_component^extracellular space`GO:0005764^cellular_component^lysosome`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0006955^biological_process^immune response`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46736_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",2.58516356848297,0,0,"TRINITY_DN46736_c1_g1_i4","LOX6_ARATH^LOX6_ARATH^Q:85-1107,H:577-917^74.49%ID^E:0^RecName: Full=Lipoxygenase 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46736_c1_g1_i4.p1","145-1110[+]","LOX6_ARATH^LOX6_ARATH^Q:1-321,H:597-917^74.45%ID^E:2e-174^RecName: Full=Lipoxygenase 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00305.16^Lipoxygenase^Lipoxygenase^1-304^E:1.6e-144",".",".","ENOG410YN4N^Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)","KEGG:ath:AT1G67560`KO:K00454","GO:0009507^cellular_component^chloroplast`GO:0005886^cellular_component^plasma membrane`GO:0016165^molecular_function^linoleate 13S-lipoxygenase activity`GO:0046872^molecular_function^metal ion binding`GO:0009695^biological_process^jasmonic acid biosynthetic process`GO:0034440^biological_process^lipid oxidation`GO:0031408^biological_process^oxylipin biosynthetic process`GO:0009611^biological_process^response to wounding","GO:0016702^molecular_function^oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47187_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",2.57749043825804,0,0,"TRINITY_DN47187_c5_g1_i1","HSP80_SOLLC^HSP80_SOLLC^Q:3-887,H:405-699^93.22%ID^E:3e-167^RecName: Full=Heat shock cognate protein 80;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN47187_c5_g1_i1.p1","3-890[+]","HSP80_SOLLC^HSP80_SOLLC^Q:1-295,H:405-699^93.22%ID^E:0^RecName: Full=Heat shock cognate protein 80;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00183.15^HSP90^Hsp90 protein^1-283^E:2.7e-129",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:sly:543903`KO:K04079","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN43209_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",2.56427077710522,{"v":9565420848.55287,"d":"9.57E+09"},"0.000153372712903105","TRINITY_DN43209_c3_g2_i8","RL19B_SCHPO^RL19B_SCHPO^Q:1-285,H:45-139^76.84%ID^E:5e-28^RecName: Full=60S ribosomal protein L19-B;^Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces",".","TRINITY_DN43209_c3_g2_i8.p1","1-435[+]","RL192_ARATH^RL192_ARATH^Q:1-135,H:45-183^61.15%ID^E:2e-53^RecName: Full=60S ribosomal protein L19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01280.17^Ribosomal_L19e^Ribosomal protein L19e^1-102^E:6.4e-40",".",".","COG2147^ribosomal protein L19","KEGG:ath:AT3G16780`KO:K02885","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0005886^cellular_component^plasma membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44140_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",2.47794608255576,0,0,"TRINITY_DN44140_c1_g1_i1","DADIS_PANGI^DADIS_PANGI^Q:378-2645,H:1-732^68.42%ID^E:0^RecName: Full=Dammarenediol II synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax`DADIS_PANGI^DADIS_PANGI^Q:2717-2821,H:726-760^88.57%ID^E:6e-11^RecName: Full=Dammarenediol II synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN44140_c1_g1_i1.p1","378-2396[+]","DADIS_PANGI^DADIS_PANGI^Q:1-670,H:1-670^70.03%ID^E:0^RecName: Full=Dammarenediol II synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF13249.3^SQHop_cyclase_N^Squalene-hopene cyclase N-terminal domain^105-364^E:8.3e-39`PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^152-194^E:1.5e-08`PF13243.3^SQHop_cyclase_C^Squalene-hopene cyclase C-terminal domain^418-667^E:1.1e-30`PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^595-635^E:3.3e-08`PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^643-669^E:4e-05",".",".",".","KEGG:ag:BAF33291`KO:K15817","GO:0016021^cellular_component^integral component of membrane`GO:0016866^molecular_function^intramolecular transferase activity`GO:0016829^molecular_function^lyase activity","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN46682_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",2.47161724331357,0,0,"TRINITY_DN46682_c5_g1_i5","CUT1C_ARATH^CUT1C_ARATH^Q:848-420,H:1-156^53.16%ID^E:1e-38^RecName: Full=Protein CURVATURE THYLAKOID 1C, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46682_c5_g1_i5.p1","417-848[-]","CUT1C_ARATH^CUT1C_ARATH^Q:1-143,H:1-156^53.16%ID^E:5e-51^RecName: Full=Protein CURVATURE THYLAKOID 1C, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14159.3^CAAD^CAAD domains of cyanobacterial aminoacyl-tRNA synthetase^59-142^E:5.1e-30",".",".","ENOG4112195^Thylakoid membrane phosphoprotein 14 kDa","KEGG:ath:AT1G52220","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN43181_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",2.46140242707229,"0.000233758948631707","0.000364834499309321","TRINITY_DN43181_c0_g2_i1","PP160_ARATH^PP160_ARATH^Q:298-669,H:40-162^64.52%ID^E:3e-46^RecName: Full=Pentatricopeptide repeat-containing protein At2g17525, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43181_c0_g2_i1.p1","190-669[+]","PP160_ARATH^PP160_ARATH^Q:37-160,H:40-162^64.52%ID^E:2e-47^RecName: Full=Pentatricopeptide repeat-containing protein At2g17525, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^74-102^E:0.42`PF01535.17^PPR^PPR repeat^113-137^E:1.4",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G17525","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN28725_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.41561802870794,0,0,"TRINITY_DN28725_c0_g1_i1","CML29_ORYSJ^CML29_ORYSJ^Q:72-485,H:19-164^40.14%ID^E:2e-20^RecName: Full=Probable calcium-binding protein CML29;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN28725_c0_g1_i1.p1","54-509[+]","CML29_ORYSJ^CML29_ORYSJ^Q:7-147,H:19-167^40%ID^E:3e-22^RecName: Full=Probable calcium-binding protein CML29;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF13405.3^EF-hand_6^EF-hand domain^20-48^E:9.5e-06`PF13202.3^EF-hand_5^EF hand^20-41^E:5.2e-06`PF00036.29^EF-hand_1^EF hand^21-46^E:3.7e-06`PF13833.3^EF-hand_8^EF-hand domain pair^100-142^E:2.1e-07`PF13202.3^EF-hand_5^EF hand^130-144^E:0.0011",".",".","COG5126^Calcium-binding protein","KEGG:osa:4341908","GO:0005509^molecular_function^calcium ion binding","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN46836_c1_g6","leaves S. abrotanoides","roots S. abrotanoides",2.3913904450595,"0.000100506845211725","0.00016090849756973","TRINITY_DN46836_c1_g6_i4","BH137_ARATH^BH137_ARATH^Q:902-402,H:133-286^54.44%ID^E:4e-49^RecName: Full=Transcription factor bHLH137;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46836_c1_g6_i4.p1","393-1298[-]","BH137_ARATH^BH137_ARATH^Q:88-299,H:95-286^50.47%ID^E:8e-56^RecName: Full=Transcription factor bHLH137;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^146-193^E:2e-06",".",".","ENOG410YIH7^Transcription factor","KEGG:ath:AT5G50915","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009739^biological_process^response to gibberellin`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN47259_c1_g10","leaves S. abrotanoides","roots S. abrotanoides",2.35834200406961,"0.000363208929054699","0.000558342227828262","TRINITY_DN47259_c1_g10_i1","PP103_ARATH^PP103_ARATH^Q:1-381,H:260-386^44.09%ID^E:1e-26^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-381,H:295-421^32.28%ID^E:2e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-381,H:175-316^32.39%ID^E:2e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:22-378,H:337-451^35.29%ID^E:3e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-384,H:431-558^32.03%ID^E:7e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-378,H:400-521^27.78%ID^E:3e-12^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:22-378,H:147-280^29.1%ID^E:8e-12^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:19-378,H:472-591^26.67%ID^E:2e-10^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-345,H:536-650^29.57%ID^E:3e-10^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:22-384,H:372-488^26.45%ID^E:9e-09^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-378,H:501-626^26.19%ID^E:1e-08^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47259_c1_g10_i1.p1","1-393[+]","PP103_ARATH^PP103_ARATH^Q:1-127,H:260-386^44.09%ID^E:1e-26^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-127,H:295-421^32.28%ID^E:2e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-127,H:175-316^32.39%ID^E:2e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:8-126,H:337-451^35.29%ID^E:3e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-128,H:431-558^32.03%ID^E:6e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-126,H:400-521^27.78%ID^E:3e-12^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:8-126,H:147-280^29.1%ID^E:7e-12^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:7-126,H:472-591^26.67%ID^E:2e-10^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-115,H:536-650^29.57%ID^E:3e-10^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:8-128,H:372-488^26.45%ID^E:8e-09^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP103_ARATH^PP103_ARATH^Q:1-126,H:501-626^26.19%ID^E:1e-08^RecName: Full=Pentatricopeptide repeat-containing protein At1g64100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^7-49^E:7.8e-10`PF01535.17^PPR^PPR repeat^7-30^E:0.03`PF13041.3^PPR_2^PPR repeat family^35-84^E:2.4e-16`PF12854.4^PPR_1^PPR repeat^35-64^E:5.5e-09`PF01535.17^PPR^PPR repeat^39-67^E:9e-07`PF12854.4^PPR_1^PPR repeat^68-97^E:9.6e-11`PF13041.3^PPR_2^PPR repeat family^71-119^E:3e-16`PF01535.17^PPR^PPR repeat^73-102^E:3.1e-07`PF12854.4^PPR_1^PPR repeat^102-127^E:5.1e-09`PF01535.17^PPR^PPR repeat^108-128^E:0.00022",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein",".",".",".",".","."]
["TRINITY_DN45516_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",2.32788834272254,"0.0171341347751852","0.0226867178835113","TRINITY_DN45516_c1_g2_i1","TBB2_DAUCA^TBB2_DAUCA^Q:516-187,H:329-438^89.09%ID^E:2e-65^RecName: Full=Tubulin beta-2 chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45516_c1_g2_i1.p1","73-516[-]","TBB2_DAUCA^TBB2_DAUCA^Q:1-110,H:329-438^89.09%ID^E:4e-66^RecName: Full=Tubulin beta-2 chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF03953.14^Tubulin_C^Tubulin C-terminal domain^2-53^E:6.4e-13",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005874^cellular_component^microtubule`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0005200^molecular_function^structural constituent of cytoskeleton`GO:0007017^biological_process^microtubule-based process",".",".","."]
["TRINITY_DN43800_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",2.32057569776385,0,0,"TRINITY_DN43800_c5_g1_i1","TKTC_SOLTU^TKTC_SOLTU^Q:114-776,H:226-446^90.5%ID^E:6e-143^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN43800_c5_g1_i1.p1","147-776[+]","TKTC_CRAPL^TKTC_CRAPL^Q:1-210,H:15-224^87.14%ID^E:6e-136^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Linderniaceae; Craterostigma","PF00456.18^Transketolase_N^Transketolase, thiamine diphosphate binding domain^1-178^E:9.9e-68",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0046872^molecular_function^metal ion binding`GO:0004802^molecular_function^transketolase activity",".",".","."]
["TRINITY_DN32046_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.30534595217343,{"v":6606660170.11041,"d":"6.61E+09"},"0.000107091798637384","TRINITY_DN32046_c0_g1_i1","PP398_ARATH^PP398_ARATH^Q:2182-119,H:3-691^52.39%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g27110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32046_c0_g1_i1.p1","101-2194[-]","PP398_ARATH^PP398_ARATH^Q:5-692,H:3-691^52.39%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g27110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^74-98^E:0.0013`PF01535.17^PPR^PPR repeat^147-173^E:0.0059`PF13041.3^PPR_2^PPR repeat family^173-219^E:7.2e-10`PF01535.17^PPR^PPR repeat^176-205^E:3.4e-07`PF01535.17^PPR^PPR repeat^210-240^E:0.72`PF01535.17^PPR^PPR repeat^249-271^E:0.019`PF13041.3^PPR_2^PPR repeat family^274-322^E:1.2e-07`PF01535.17^PPR^PPR repeat^276-303^E:0.0021`PF01535.17^PPR^PPR repeat^349-376^E:0.34`PF13041.3^PPR_2^PPR repeat family^375-421^E:1.7e-11`PF01535.17^PPR^PPR repeat^377-406^E:7.1e-08`PF01535.17^PPR^PPR repeat^450-476^E:0.57`PF13041.3^PPR_2^PPR repeat family^476-523^E:2.5e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^476-522^E:1.1e-05`PF01535.17^PPR^PPR repeat^478-505^E:7.6e-08`PF01535.17^PPR^PPR repeat^513-538^E:0.036`PF01535.17^PPR^PPR repeat^551-572^E:0.12`PF01535.17^PPR^PPR repeat^623-646^E:0.75",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G27110",".",".",".","."]
["TRINITY_DN41571_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.24334157341093,0,0,"TRINITY_DN41571_c0_g1_i2","ISPF_CATRO^ISPF_CATRO^Q:393-902,H:67-236^90%ID^E:1e-105^RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus",".","TRINITY_DN41571_c0_g1_i2.p1","192-905[+]","ISPF_CATRO^ISPF_CATRO^Q:1-237,H:1-236^71.78%ID^E:2e-110^RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF02542.13^YgbB^YgbB family^81-234^E:4.4e-61",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0008685^molecular_function^2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity`GO:0046872^molecular_function^metal ion binding`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0008685^molecular_function^2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process",".","."]
["TRINITY_DN46653_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",2.24071318464033,0,0,"TRINITY_DN46653_c3_g1_i15","FKB62_ARATH^FKB62_ARATH^Q:4523-3132,H:88-550^81.68%ID^E:0^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FKB62_ARATH^FKB62_ARATH^Q:4322-3606,H:39-271^37.96%ID^E:1e-29^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FKB62_ARATH^FKB62_ARATH^Q:5429-4992,H:1-91^39.86%ID^E:1e-13^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46653_c3_g1_i15.p1","3075-4475[-]","FKB62_ARATH^FKB62_ARATH^Q:1-448,H:104-550^81.7%ID^E:0^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FKB62_ARATH^FKB62_ARATH^Q:52-290,H:39-271^37.96%ID^E:1e-36^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FKB62_ARATH^FKB62_ARATH^Q:172-303,H:42-168^39.71%ID^E:3e-13^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00254.25^FKBP_C^FKBP-type peptidyl-prolyl cis-trans isomerase^1-39^E:2e-10`PF00254.25^FKBP_C^FKBP-type peptidyl-prolyl cis-trans isomerase^65-156^E:2.3e-17`PF00254.25^FKBP_C^FKBP-type peptidyl-prolyl cis-trans isomerase^181-278^E:2.6e-21`PF14559.3^TPR_19^Tetratricopeptide repeat^358-418^E:1.4e-05`PF13432.3^TPR_16^Tetratricopeptide repeat^358-414^E:0.017`PF00515.25^TPR_1^Tetratricopeptide repeat^381-414^E:1.6e-07`PF07719.14^TPR_2^Tetratricopeptide repeat^382-414^E:8.8e-06`PF13181.3^TPR_8^Tetratricopeptide repeat^382-414^E:1.9e-06",".",".","COG0545^Peptidyl-prolyl cis-trans isomerase",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0070370^biological_process^cellular heat acclimation`GO:0006457^biological_process^protein folding","GO:0006457^biological_process^protein folding`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46657_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",2.23577109587278,"0.000339949183565362","0.000523497272161191","TRINITY_DN46657_c1_g3_i1","RFS2_ARATH^RFS2_ARATH^Q:108-2309,H:1-757^49.54%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46657_c1_g3_i1.p1","108-2351[+]","RFS2_ARATH^RFS2_ARATH^Q:1-734,H:1-757^49.54%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05691.9^Raffinose_syn^Raffinose synthase or seed imbibition protein Sip1^9-732^E:4.8e-259",".",".","ENOG410YBU9^raffinose synthase","KEGG:ath:AT3G57520`KO:K06617","GO:0009506^cellular_component^plasmodesma`GO:0052692^molecular_function^raffinose alpha-galactosidase activity`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0034484^biological_process^raffinose catabolic process`GO:0080167^biological_process^response to karrikin`GO:0006979^biological_process^response to oxidative stress",".",".","."]
["TRINITY_DN39816_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",2.22242940228247,"0.0171286619753593","0.0226805682239489","TRINITY_DN39816_c0_g1_i2","RS151_ARATH^RS151_ARATH^Q:36-314,H:59-152^79.79%ID^E:5e-48^RecName: Full=40S ribosomal protein S15-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39816_c0_g1_i2.p1","3-317[+]","RS15_ORYSJ^RS15_ORYSJ^Q:1-104,H:51-154^79.05%ID^E:5e-53^RecName: Full=40S ribosomal protein S15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00203.18^Ribosomal_S19^Ribosomal protein S19^7-88^E:9.9e-35",".",".","COG0185^Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity)",".","GO:0022627^cellular_component^cytosolic small ribosomal subunit`GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44422_c2_g6","leaves S. abrotanoides","roots S. abrotanoides",2.20516638101497,"0.000205053978718066","0.000321389336571279","TRINITY_DN44422_c2_g6_i2","MDR_ORYSJ^MDR_ORYSJ^Q:2397-124,H:495-1236^56.52%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3852-3118,H:94-310^38.78%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3025-2492,H:314-491^59.55%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:1815-124,H:36-597^37.44%ID^E:2e-87^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3037-2498,H:948-1127^47.22%ID^E:1e-42^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3813-3151,H:744-937^18.92%ID^E:1e-42^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44422_c2_g6_i2.p1","94-2199[-]","MDR_ORYSJ^MDR_ORYSJ^Q:2-692,H:562-1236^54.34%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:129-692,H:36-597^37.61%ID^E:5e-95^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00664.20^ABC_membrane^ABC transporter transmembrane region^130-401^E:1.4e-51`PF00005.24^ABC_tran^ABC transporter^471-620^E:5.4e-37",".",".","COG1132^(ABC) transporter",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN40489_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",2.18701647730207,0,0,"TRINITY_DN40489_c0_g2_i3","PNSL5_ARATH^PNSL5_ARATH^Q:771-253,H:85-257^81.5%ID^E:7e-91^RecName: Full=Photosynthetic NDH subunit of lumenal location 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40489_c0_g2_i3.p2","250-576[-]","PNSL5_ARATH^PNSL5_ARATH^Q:1-108,H:150-257^80.56%ID^E:2e-62^RecName: Full=Photosynthetic NDH subunit of lumenal location 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^1-103^E:4.2e-32",".",".","ENOG410Z0G4^PPIases accelerate the folding of proteins (By similarity)","KEGG:ath:AT5G13120`KO:K03768","GO:0009507^cellular_component^chloroplast`GO:0009533^cellular_component^chloroplast stromal thylakoid`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0043424^molecular_function^protein histidine kinase binding`GO:0010275^biological_process^NAD(P)H dehydrogenase complex assembly`GO:0006457^biological_process^protein folding`GO:0006810^biological_process^transport","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN44524_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",2.12331072424389,0,0,"TRINITY_DN44524_c2_g2_i3","IQM6_ARATH^IQM6_ARATH^Q:868-1062,H:164-246^43.37%ID^E:1e-30^RecName: Full=IQ domain-containing protein IQM6 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IQM6_ARATH^IQM6_ARATH^Q:1121-1291,H:238-293^52.63%ID^E:1e-30^RecName: Full=IQ domain-containing protein IQM6 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IQM6_ARATH^IQM6_ARATH^Q:1527-1637,H:323-359^40.54%ID^E:1e-30^RecName: Full=IQ domain-containing protein IQM6 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IQM6_ARATH^IQM6_ARATH^Q:666-767,H:124-157^38.24%ID^E:1e-30^RecName: Full=IQ domain-containing protein IQM6 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IQM6_ARATH^IQM6_ARATH^Q:1357-1407,H:289-305^52.94%ID^E:1e-30^RecName: Full=IQ domain-containing protein IQM6 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44524_c2_g2_i3.p2","2279-2689[-]","ATOX1_ARATH^ATOX1_ARATH^Q:36-111,H:1-76^71.05%ID^E:3e-34^RecName: Full=Copper transport protein ATX1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00403.23^HMA^Heavy-metal-associated domain^43-97^E:9e-17",".",".","COG2608^heavy metal transport detoxification protein","KEGG:ath:AT1G66240`KO:K07213","GO:0000785^cellular_component^chromatin`GO:0005829^cellular_component^cytosol`GO:0046872^molecular_function^metal ion binding`GO:0006825^biological_process^copper ion transport","GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport",".","."]
["TRINITY_DN45912_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",2.09187245528807,"0.000484218579050474","0.000737737570251996","TRINITY_DN45912_c2_g3_i2","Y5576_ARATH^Y5576_ARATH^Q:339-659,H:252-358^36.94%ID^E:1e-11^RecName: Full=Probable receptor-like serine/threonine-protein kinase At5g57670;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45912_c2_g3_i2.p1","126-713[+]","Y1497_ARATH^Y1497_ARATH^Q:19-155,H:264-397^33.57%ID^E:6e-14^RecName: Full=Probable receptor-like protein kinase At1g49730;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^90-152^E:0.00018",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G49730","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47259_c1_g8","leaves S. abrotanoides","roots S. abrotanoides",2.07813772812722,"0.000246674725294933","0.00038426976918598","TRINITY_DN47259_c1_g8_i1","PPR37_ARATH^PPR37_ARATH^Q:29-517,H:443-605^38.65%ID^E:2e-31^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:11-517,H:297-465^28.4%ID^E:3e-22^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:17-517,H:229-395^29.94%ID^E:8e-21^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:77-517,H:214-360^29.93%ID^E:1e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:20-514,H:265-429^27.88%ID^E:2e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:11-529,H:332-501^28.32%ID^E:2e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:44-514,H:378-534^28.03%ID^E:2e-17^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:32-517,H:94-255^27.16%ID^E:3e-16^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:68-514,H:141-289^32.89%ID^E:5e-16^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:29-418,H:478-607^28.46%ID^E:1e-13^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:20-313,H:510-607^29.59%ID^E:9e-08^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47259_c1_g8_i1.p1","44-595[+]","PPR37_ARATH^PPR37_ARATH^Q:1-158,H:448-605^38.61%ID^E:7e-31^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-169,H:238-403^30.18%ID^E:4e-21^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:12-158,H:214-360^29.93%ID^E:1e-19^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-176,H:308-483^25%ID^E:6e-19^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-176,H:378-588^25.59%ID^E:2e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-162,H:343-501^29.01%ID^E:2e-17^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-157,H:273-429^28.03%ID^E:2e-17^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:9-157,H:141-289^32.89%ID^E:4e-16^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-158,H:98-255^26.58%ID^E:2e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-125,H:483-607^28.8%ID^E:5e-13^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^1-50^E:0.00013`PF12854.4^PPR_1^PPR repeat^6-37^E:6e-11`PF13041.3^PPR_2^PPR repeat family^9-48^E:8.7e-09`PF01535.17^PPR^PPR repeat^11-40^E:8.5e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^32-88^E:4.7e-07`PF12854.4^PPR_1^PPR repeat^39-71^E:2.3e-08`PF13041.3^PPR_2^PPR repeat family^43-83^E:2.9e-09`PF01535.17^PPR^PPR repeat^46-76^E:1.2e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^67-123^E:2.7e-09`PF12854.4^PPR_1^PPR repeat^74-107^E:2.5e-08`PF13041.3^PPR_2^PPR repeat family^78-126^E:4.5e-14`PF01535.17^PPR^PPR repeat^82-111^E:8e-07`PF13041.3^PPR_2^PPR repeat family^113-158^E:4.4e-07`PF01535.17^PPR^PPR repeat^116-144^E:1.4",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12620",".",".",".","."]
["TRINITY_DN47453_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",2.04733669154648,"0.000348063353057607","0.000535540753878544","TRINITY_DN47453_c0_g4_i1","FRO5_ARATH^FRO5_ARATH^Q:697-2505,H:97-707^56.68%ID^E:0^RecName: Full=Ferric reduction oxidase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47453_c0_g4_i1.p1","718-2508[+]","FRO4_ARATH^FRO4_ARATH^Q:1-596,H:99-699^57.55%ID^E:0^RecName: Full=Ferric reduction oxidase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01794.16^Ferric_reduct^Ferric reductase like transmembrane component^59-178^E:6.9e-15`PF08022.9^FAD_binding_8^FAD-binding domain^218-309^E:2.3e-19`PF08030.9^NAD_binding_6^Ferric reductase NAD binding domain^315-580^E:1.2e-28",".",".","ENOG410XNZY^NADPH Oxidase","KEGG:ath:AT5G23980","GO:0016021^cellular_component^integral component of membrane`GO:0000293^molecular_function^ferric-chelate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0006811^biological_process^ion transport","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44775_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",2.0343607470931,0,0,"TRINITY_DN44775_c1_g4_i2","DHAR2_ARATH^DHAR2_ARATH^Q:1146-511,H:1-213^71.83%ID^E:9e-108^RecName: Full=Glutathione S-transferase DHAR2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44775_c1_g4_i2.p1","508-1146[-]","DHAR2_ARATH^DHAR2_ARATH^Q:1-212,H:1-213^71.83%ID^E:4e-111^RecName: Full=Glutathione S-transferase DHAR2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^19-87^E:1.6e-17`PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^19-77^E:3.2e-07`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^20-82^E:5.5e-14`PF13410.3^GST_C_2^Glutathione S-transferase, C-terminal domain^117-182^E:2.9e-09",".",".","ENOG411205E^dehydroascorbate reductase","KEGG:ath:AT1G75270","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0043295^molecular_function^glutathione binding`GO:0045174^molecular_function^glutathione dehydrogenase (ascorbate) activity`GO:0004364^molecular_function^glutathione transferase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0006749^biological_process^glutathione metabolic process`GO:0010731^biological_process^protein glutathionylation","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46035_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",1.9962745667443,"0.000317619255121672","0.000490296412593536","TRINITY_DN46035_c1_g3_i1","WAKLH_ARATH^WAKLH_ARATH^Q:2-490,H:35-221^29.7%ID^E:7e-10^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46035_c1_g3_i1.p1","2-493[+]","WAKLH_ARATH^WAKLH_ARATH^Q:1-163,H:35-221^29.7%ID^E:6e-10^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13947.3^GUB_WAK_bind^Wall-associated receptor kinase galacturonan-binding^1-110^E:1.6e-16",".",".",".","KEGG:ath:AT1G69730","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030247^molecular_function^polysaccharide binding",".","."]
["TRINITY_DN38915_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.99442681434016,0,0,"TRINITY_DN38915_c0_g1_i3","UVB31_ARATH^UVB31_ARATH^Q:332-1342,H:91-421^68.64%ID^E:3e-147^RecName: Full=UV-B-induced protein At3g17800, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38915_c0_g1_i3.p1","86-1345[+]","UVB31_ARATH^UVB31_ARATH^Q:83-419,H:91-421^69.91%ID^E:7e-159^RecName: Full=UV-B-induced protein At3g17800, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05542.8^DUF760^Protein of unknown function (DUF760)^140-266^E:3.2e-24",".",".","ENOG410YDXB^Protein of unknown function (DUF760)",".","GO:0009507^cellular_component^chloroplast`GO:0010193^biological_process^response to ozone`GO:0010224^biological_process^response to UV-B`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN47239_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",1.97831638970867,"0.000745206601950658","0.00112028506073098","TRINITY_DN47239_c1_g4_i3","ALKR3_ARATH^ALKR3_ARATH^Q:170-994,H:69-344^65.34%ID^E:9e-126^RecName: Full=Probable aldo-keto reductase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALKR3_ARATH^ALKR3_ARATH^Q:6-95,H:45-74^76.67%ID^E:3e-06^RecName: Full=Probable aldo-keto reductase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47239_c1_g4_i3.p1","260-997[+]","ALKR3_ARATH^ALKR3_ARATH^Q:3-245,H:101-344^67.76%ID^E:6e-118^RecName: Full=Probable aldo-keto reductase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00248.18^Aldo_ket_red^Aldo/keto reductase family^4-216^E:4.3e-53",".",".","COG0667^Aldo keto reductase","KEGG:ath:AT1G60690","GO:0009941^cellular_component^chloroplast envelope`GO:0005886^cellular_component^plasma membrane`GO:0016491^molecular_function^oxidoreductase activity",".",".","."]
["TRINITY_DN42362_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.97420069245753,"0.000338146993963967","0.000520868489380397","TRINITY_DN42362_c0_g1_i1","PP449_ARATH^PP449_ARATH^Q:1263-61,H:221-620^47.01%ID^E:5e-133^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP449_ARATH^PP449_ARATH^Q:1068-625,H:185-328^29.53%ID^E:7e-12^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42362_c0_g1_i1.p1","58-1212[-]","PP425_ARATH^PP425_ARATH^Q:1-384,H:265-646^47.14%ID^E:3e-128^RecName: Full=Pentatricopeptide repeat-containing protein At5g48910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP425_ARATH^PP425_ARATH^Q:47-195,H:210-356^29.8%ID^E:2e-14^RecName: Full=Pentatricopeptide repeat-containing protein At5g48910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP425_ARATH^PP425_ARATH^Q:42-134,H:51-149^35.64%ID^E:8e-07^RecName: Full=Pentatricopeptide repeat-containing protein At5g48910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^48-73^E:7.5e-05`PF13041.3^PPR_2^PPR repeat family^77-124^E:8.2e-08`PF01535.17^PPR^PPR repeat^79-109^E:1.1e-05`PF01535.17^PPR^PPR repeat^114-142^E:0.024`PF01535.17^PPR^PPR repeat^151-175^E:0.031`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^250-374^E:1.4e-39",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G48910","GO:0009507^cellular_component^chloroplast`GO:0009451^biological_process^RNA modification","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN44817_c6_g1","leaves S. abrotanoides","roots S. abrotanoides",1.92751645837644,"0.000305120839002226","0.000471774361061432","TRINITY_DN44817_c6_g1_i1","PP233_ARATH^PP233_ARATH^Q:211-1326,H:78-449^51.88%ID^E:2e-134^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g15200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44817_c6_g1_i1.p1","1-1326[+]","PP233_ARATH^PP233_ARATH^Q:71-442,H:78-449^51.88%ID^E:2e-134^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g15200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^138-165^E:0.63`PF01535.17^PPR^PPR repeat^173-202^E:0.083`PF13041.3^PPR_2^PPR repeat family^239-287^E:7.3e-11`PF01535.17^PPR^PPR repeat^242-271^E:0.22`PF12854.4^PPR_1^PPR repeat^270-301^E:1.8e-08`PF01535.17^PPR^PPR repeat^276-306^E:8.5e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^297-354^E:7.7e-06`PF12854.4^PPR_1^PPR repeat^304-336^E:5.7e-07`PF13041.3^PPR_2^PPR repeat family^308-357^E:2.3e-13`PF01535.17^PPR^PPR repeat^313-341^E:1.9e-05`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^324-433^E:5e-08`PF13041.3^PPR_2^PPR repeat family^344-391^E:5.2e-11`PF01535.17^PPR^PPR repeat^347-375^E:1.1e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^367-424^E:8.5e-06`PF01535.17^PPR^PPR repeat^416-442^E:0.25",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G15200","GO:0022626^cellular_component^cytosolic ribosome",".",".","."]
["TRINITY_DN47434_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",1.91133114176526,0,0,"TRINITY_DN47434_c3_g1_i9","PRP38_ARATH^PRP38_ARATH^Q:223-879,H:1-215^79.45%ID^E:9e-107^RecName: Full=Pre-mRNA-splicing factor 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47434_c3_g1_i9.p1","223-1407[+]","PRP38_ARATH^PRP38_ARATH^Q:1-203,H:1-203^84.24%ID^E:6e-114^RecName: Full=Pre-mRNA-splicing factor 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03371.12^PRP38^PRP38 family^11-172^E:1.4e-61`PF12871.4^PRP38_assoc^Pre-mRNA-splicing factor 38-associated hydrophilic C-term^179-279^E:5.1e-07",".",".","ENOG410XQ3F^RNA splicing","KEGG:ath:AT2G40650`KO:K12849","GO:0005681^cellular_component^spliceosomal complex`GO:0006397^biological_process^mRNA processing`GO:0008380^biological_process^RNA splicing",".",".","."]
["TRINITY_DN37508_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.90902933806857,"0.000429590079969266","0.000656516640238777","TRINITY_DN37508_c0_g1_i1","XERIC_ARATH^XERIC_ARATH^Q:550-365,H:98-156^40.32%ID^E:6e-11^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37508_c0_g1_i1.p1","299-736[-]","XERIC_ARATH^XERIC_ARATH^Q:63-124,H:98-156^40.32%ID^E:8e-12^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^67-110^E:1.1e-12`PF17123.2^zf-RING_11^RING-like zinc finger^67-95^E:3.8e-07`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^67-109^E:1.2e-06`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^68-109^E:1e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^68-107^E:5.9e-05",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT2G04240`KO:K16285","GO:0016021^cellular_component^integral component of membrane`GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009688^biological_process^abscisic acid biosynthetic process`GO:0009687^biological_process^abscisic acid metabolic process`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin`GO:0009739^biological_process^response to gibberellin`GO:0006970^biological_process^response to osmotic stress`GO:0009651^biological_process^response to salt stress","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN43181_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.88923799093546,"0.000261253307285942","0.000406148479244406","TRINITY_DN43181_c0_g1_i1","PP160_ARATH^PP160_ARATH^Q:1504-86,H:155-626^52.43%ID^E:5e-178^RecName: Full=Pentatricopeptide repeat-containing protein At2g17525, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43181_c0_g1_i1.p1","83-1504[-]","PP160_ARATH^PP160_ARATH^Q:1-473,H:155-626^52.43%ID^E:2e-178^RecName: Full=Pentatricopeptide repeat-containing protein At2g17525, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^29-59^E:0.0071`PF13812.3^PPR_3^Pentatricopeptide repeat domain^49-106^E:3.7e-06`PF12854.4^PPR_1^PPR repeat^58-89^E:1.4e-11`PF13041.3^PPR_2^PPR repeat family^62-91^E:3.7e-08`PF01535.17^PPR^PPR repeat^64-91^E:2.3e-07`PF12854.4^PPR_1^PPR repeat^95-119^E:2e-05`PF01535.17^PPR^PPR repeat^95-124^E:0.0036`PF01535.17^PPR^PPR repeat^133-159^E:0.26`PF13812.3^PPR_3^Pentatricopeptide repeat domain^152-206^E:1.1e-06`PF13041.3^PPR_2^PPR repeat family^163-210^E:4e-13`PF01535.17^PPR^PPR repeat^165-195^E:6.8e-05`PF12854.4^PPR_1^PPR repeat^193-226^E:2.9e-12`PF13041.3^PPR_2^PPR repeat family^197-246^E:4.9e-16`PF01535.17^PPR^PPR repeat^201-230^E:4e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^221-278^E:2.6e-07`PF12854.4^PPR_1^PPR repeat^229-260^E:7.1e-06`PF01535.17^PPR^PPR repeat^235-263^E:0.00044`PF01535.17^PPR^PPR repeat^273-298^E:0.033`PF01535.17^PPR^PPR repeat^311-334^E:0.0016`PF13812.3^PPR_3^Pentatricopeptide repeat domain^326-384^E:0.002`PF12854.4^PPR_1^PPR repeat^337-365^E:3e-08`PF01535.17^PPR^PPR repeat^341-367^E:1.7e-06`PF13041.3^PPR_2^PPR repeat family^375-420^E:5.2e-10`PF01535.17^PPR^PPR repeat^375-405^E:0.0019`PF13812.3^PPR_3^Pentatricopeptide repeat domain^395-450^E:0.0016`PF01535.17^PPR^PPR repeat^411-440^E:0.032",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G17525","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN45921_c3_g5","leaves S. abrotanoides","roots S. abrotanoides",1.88083782260571,"0.00768369017390976","0.0105634344829888","TRINITY_DN45921_c3_g5_i1","CYF_ATRBE^CYF_ATRBE^Q:1531-572,H:1-320^94.38%ID^E:0^RecName: Full=Cytochrome f {ECO:0000255|HAMAP-Rule:MF_00610};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Atropa",".","TRINITY_DN45921_c3_g5_i1.p1","569-1531[-]","CYF_ATRBE^CYF_ATRBE^Q:1-320,H:1-320^94.38%ID^E:0^RecName: Full=Cytochrome f {ECO:0000255|HAMAP-Rule:MF_00610};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Atropa","PF16639.2^Apocytochr_F_N^Apocytochrome F, N-terminal^36-190^E:1.2e-78`PF01333.16^Apocytochr_F_C^Apocytochrome F, C-terminal^202-320^E:4.4e-50",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0031361^cellular_component^integral component of thylakoid membrane`GO:0009055^molecular_function^electron carrier activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0055114^biological_process^oxidation-reduction process`GO:0015979^biological_process^photosynthesis","GO:0005506^molecular_function^iron ion binding`GO:0009055^molecular_function^electron carrier activity`GO:0020037^molecular_function^heme binding`GO:0015979^biological_process^photosynthesis`GO:0031361^cellular_component^integral component of thylakoid membrane",".","."]
["TRINITY_DN34678_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.86626199210249,"0.000814388454831229","0.00122040163403073","TRINITY_DN34678_c0_g1_i1","PP151_ARATH^PP151_ARATH^Q:2167-239,H:50-667^34.97%ID^E:1e-124^RecName: Full=Pentatricopeptide repeat-containing protein At2g13600;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP151_ARATH^PP151_ARATH^Q:1858-416,H:22-504^23.94%ID^E:2e-42^RecName: Full=Pentatricopeptide repeat-containing protein At2g13600;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN34678_c0_g1_i1.p1","218-2407[-]","PP151_ARATH^PP151_ARATH^Q:81-723,H:50-667^34.97%ID^E:3e-133^RecName: Full=Pentatricopeptide repeat-containing protein At2g13600;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP151_ARATH^PP151_ARATH^Q:207-664,H:46-504^25.96%ID^E:9e-50^RecName: Full=Pentatricopeptide repeat-containing protein At2g13600;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP151_ARATH^PP151_ARATH^Q:314-611,H:28-317^33.56%ID^E:3e-47^RecName: Full=Pentatricopeptide repeat-containing protein At2g13600;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^85-114^E:0.0037`PF01535.17^PPR^PPR repeat^116-139^E:8.4e-06`PF13041.3^PPR_2^PPR repeat family^145-191^E:2e-09`PF01535.17^PPR^PPR repeat^147-176^E:0.00033`PF01535.17^PPR^PPR repeat^182-212^E:1.1`PF01535.17^PPR^PPR repeat^219-246^E:0.77`PF13041.3^PPR_2^PPR repeat family^246-277^E:3.4e-07`PF01535.17^PPR^PPR repeat^248-277^E:6.3e-07`PF13041.3^PPR_2^PPR repeat family^277-324^E:1.5e-11`PF01535.17^PPR^PPR repeat^279-308^E:1.2e-05`PF13041.3^PPR_2^PPR repeat family^377-409^E:1.2e-07`PF12854.4^PPR_1^PPR repeat^378-405^E:1.9e-07`PF01535.17^PPR^PPR repeat^380-409^E:1e-08`PF13041.3^PPR_2^PPR repeat family^409-456^E:5.5e-10`PF01535.17^PPR^PPR repeat^411-440^E:0.014`PF01535.17^PPR^PPR repeat^484-510^E:0.024`PF01535.17^PPR^PPR repeat^512-540^E:6.4e-05`PF01535.17^PPR^PPR repeat^552-575^E:0.33`PF01535.17^PPR^PPR repeat^585-609^E:0.063",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G13600","GO:0005739^cellular_component^mitochondrion`GO:0080156^biological_process^mitochondrial mRNA modification`GO:0010182^biological_process^sugar mediated signaling pathway",".",".","."]
["TRINITY_DN28179_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.84216108904174,"0.000756730458700488","0.00113704730852697","TRINITY_DN28179_c0_g1_i1","CBL10_ARATH^CBL10_ARATH^Q:261-1121,H:54-340^60.42%ID^E:2e-119^RecName: Full=COBRA-like protein 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28179_c0_g1_i1.p1","159-1121[+]","CBL10_ARATH^CBL10_ARATH^Q:35-321,H:54-340^60.42%ID^E:2e-120^RecName: Full=COBRA-like protein 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04833.12^COBRA^COBRA-like protein^226-321^E:8.9e-28","sigP:1^23^0.731^YES",".","ENOG410ZHV6^cobra-like protein","KEGG:ath:AT3G20580","GO:0031225^cellular_component^anchored component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0016049^biological_process^cell growth`GO:0010215^biological_process^cellulose microfibril organization","GO:0010215^biological_process^cellulose microfibril organization`GO:0016049^biological_process^cell growth`GO:0031225^cellular_component^anchored component of membrane",".","."]
["TRINITY_DN46310_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",1.80802709974298,"0.00153657504612544","0.00224957412788992","TRINITY_DN46310_c3_g1_i7","SFH12_ARATH^SFH12_ARATH^Q:1963-182,H:6-542^55.76%ID^E:0^RecName: Full=Phosphatidylinositol/phosphatidylcholine transfer protein SFH12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46310_c3_g1_i7.p1","179-2026[-]","SFH12_ARATH^SFH12_ARATH^Q:22-615,H:6-542^57.17%ID^E:0^RecName: Full=Phosphatidylinositol/phosphatidylcholine transfer protein SFH12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03765.12^CRAL_TRIO_N^CRAL/TRIO, N-terminal domain^90-117^E:3.3e-06`PF00650.17^CRAL_TRIO^CRAL/TRIO domain^142-307^E:9.9e-33",".",".","ENOG410XRSQ^Transfer protein","KEGG:ath:AT4G36490","GO:0000139^cellular_component^Golgi membrane`GO:0005886^cellular_component^plasma membrane`GO:0015031^biological_process^protein transport",".",".","."]
["TRINITY_DN41237_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.80770189617409,"0.00119016717738356","0.00175821902342976","TRINITY_DN41237_c1_g1_i1","SUFE1_ARATH^SUFE1_ARATH^Q:947-183,H:105-371^58.06%ID^E:3e-70^RecName: Full=SufE-like protein 1, chloroplastic/mitochondrial {ECO:0000303|PubMed:17452319};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41237_c1_g1_i1.p1","180-647[-]","SUFE1_ARATH^SUFE1_ARATH^Q:1-155,H:205-371^50%ID^E:2e-35^RecName: Full=SufE-like protein 1, chloroplastic/mitochondrial {ECO:0000303|PubMed:17452319};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01722.15^BolA^BolA-like protein^80-154^E:2.2e-28",".",".","COG0271^Bola-like protein`COG2166^Fe-S metabolism associated","KEGG:ath:AT4G26500","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005739^cellular_component^mitochondrion`GO:0008047^molecular_function^enzyme activator activity`GO:0043085^biological_process^positive regulation of catalytic activity",".",".","."]
["TRINITY_DN41294_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.78480232389259,"0.00422636331281512","0.00596210945313567","TRINITY_DN41294_c0_g1_i5","PP306_ARATH^PP306_ARATH^Q:150-1781,H:1-547^54.01%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:420-1316,H:234-563^28.36%ID^E:2e-34^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:846-1784,H:97-373^26.52%ID^E:2e-28^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41294_c0_g1_i5.p1","150-1787[+]","PP306_ARATH^PP306_ARATH^Q:1-544,H:1-547^54.01%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:91-389,H:234-563^28.36%ID^E:2e-35^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:373-545,H:97-268^28.32%ID^E:9e-13^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^127-171^E:4.8e-09`PF01535.17^PPR^PPR repeat^128-153^E:0.016`PF13812.3^PPR_3^Pentatricopeptide repeat domain^156-206^E:5.2e-06`PF13041.3^PPR_2^PPR repeat family^159-207^E:8.6e-13`PF12854.4^PPR_1^PPR repeat^159-186^E:4.1e-07`PF01535.17^PPR^PPR repeat^161-191^E:0.00011`PF13812.3^PPR_3^Pentatricopeptide repeat domain^182-222^E:3.2e-05`PF12854.4^PPR_1^PPR repeat^190-222^E:2.6e-13`PF13041.3^PPR_2^PPR repeat family^193-241^E:2.7e-16`PF01535.17^PPR^PPR repeat^196-225^E:9.8e-10`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^213-296^E:7e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^217-275^E:4.3e-09`PF12854.4^PPR_1^PPR repeat^225-257^E:4e-06`PF01535.17^PPR^PPR repeat^231-260^E:2.6e-05`PF13041.3^PPR_2^PPR repeat family^233-277^E:6.2e-11`PF12854.4^PPR_1^PPR repeat^260-292^E:2.3e-11`PF13041.3^PPR_2^PPR repeat family^263-312^E:2.8e-20`PF13812.3^PPR_3^Pentatricopeptide repeat domain^263-308^E:3.6e-09`PF01535.17^PPR^PPR repeat^267-296^E:4e-09`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^281-392^E:3.9e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^287-343^E:4.8e-12`PF12854.4^PPR_1^PPR repeat^294-327^E:1.2e-11`PF13041.3^PPR_2^PPR repeat family^299-347^E:1.4e-16`PF01535.17^PPR^PPR repeat^301-331^E:6.5e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^321-380^E:1.4e-12`PF12854.4^PPR_1^PPR repeat^330-360^E:5.3e-10`PF13041.3^PPR_2^PPR repeat family^333-381^E:2.1e-16`PF01535.17^PPR^PPR repeat^336-366^E:2.1e-08`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^354-476^E:3.2e-10`PF13041.3^PPR_2^PPR repeat family^368-416^E:6.6e-13`PF01535.17^PPR^PPR repeat^371-401^E:2.4e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^394-448^E:3.9e-09`PF12854.4^PPR_1^PPR repeat^399-432^E:7.1e-08`PF01535.17^PPR^PPR repeat^406-435^E:3.1e-05`PF13041.3^PPR_2^PPR repeat family^408-452^E:2.9e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^431-483^E:2.4e-07`PF12854.4^PPR_1^PPR repeat^435-466^E:5.4e-10`PF01535.17^PPR^PPR repeat^441-468^E:0.00018`PF12854.4^PPR_1^PPR repeat^471-501^E:1.3e-08`PF13041.3^PPR_2^PPR repeat family^473-519^E:9.8e-12`PF01535.17^PPR^PPR repeat^476-505^E:3.5e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^496-545^E:0.00017",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G11690","GO:0005739^cellular_component^mitochondrion`GO:0080156^biological_process^mitochondrial mRNA modification`GO:0009737^biological_process^response to abscisic acid",".",".","."]
["TRINITY_DN24042_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.77192230385093,"0.000313853546609133","0.000484838749114176","TRINITY_DN24042_c0_g1_i1","PUP9_ARATH^PUP9_ARATH^Q:1206-136,H:24-387^41.64%ID^E:2e-46^RecName: Full=Probable purine permease 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN24042_c0_g1_i1.p1","151-894[-]","PUP9_ARATH^PUP9_ARATH^Q:2-244,H:133-377^46.53%ID^E:4e-75^RecName: Full=Probable purine permease 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16913.2^PUNUT^Purine nucleobase transmembrane transport^1-227^E:5.7e-70",".",".","ENOG4111D9S^purine permease","KEGG:ath:AT4G18220","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity",".",".","."]
["TRINITY_DN43818_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",1.75737619237741,"0.0106229655872103","0.0144047076693364","TRINITY_DN43818_c2_g1_i2","NC100_ARATH^NC100_ARATH^Q:3-659,H:97-336^41.15%ID^E:4e-45^RecName: Full=NAC domain-containing protein 100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43818_c2_g1_i2.p1","3-662[+]","NC100_ARATH^NC100_ARATH^Q:1-219,H:97-336^41.15%ID^E:7e-48^RecName: Full=NAC domain-containing protein 100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^1-45^E:9.7e-08",".",".","ENOG410Y9QZ^NAC domain-containing protein","KEGG:ath:AT5G61430","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47475_c5_g3","leaves S. abrotanoides","roots S. abrotanoides",1.74906787294742,"0.000184090860606544","0.000289444191317696","TRINITY_DN47475_c5_g3_i2","PP277_ARATH^PP277_ARATH^Q:2426-396,H:100-782^48.46%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP277_ARATH^PP277_ARATH^Q:2327-591,H:23-608^25.59%ID^E:1e-59^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47475_c5_g3_i2.p1","336-2471[-]","PP277_ARATH^PP277_ARATH^Q:5-692,H:89-782^48.63%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP277_ARATH^PP277_ARATH^Q:33-627,H:8-608^25.41%ID^E:6e-61^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^51-79^E:0.76`PF01535.17^PPR^PPR repeat^154-179^E:0.47`PF13041.3^PPR_2^PPR repeat family^179-228^E:1.8e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^181-227^E:9.6e-05`PF01535.17^PPR^PPR repeat^183-210^E:6.9e-07`PF01535.17^PPR^PPR repeat^255-276^E:0.01`PF13041.3^PPR_2^PPR repeat family^280-329^E:7e-09`PF01535.17^PPR^PPR repeat^283-309^E:4.7e-06`PF01535.17^PPR^PPR repeat^385-415^E:4.8e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^483-530^E:0.0018`PF13041.3^PPR_2^PPR repeat family^484-530^E:8.5e-13`PF01535.17^PPR^PPR repeat^487-516^E:7.6e-08`PF01535.17^PPR^PPR repeat^521-549^E:0.056`PF01535.17^PPR^PPR repeat^557-578^E:0.0074",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G50420",".",".",".","."]
["TRINITY_DN46239_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",1.72250737413535,"0.000222686582185969","0.00034802960333305","TRINITY_DN46239_c0_g4_i1","PP301_ARATH^PP301_ARATH^Q:236-1753,H:95-653^35.55%ID^E:4e-101^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP301_ARATH^PP301_ARATH^Q:683-1672,H:76-388^28.36%ID^E:5e-27^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46239_c0_g4_i1.p1","173-1777[+]","PP301_ARATH^PP301_ARATH^Q:22-527,H:95-653^35.55%ID^E:2e-102^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP301_ARATH^PP301_ARATH^Q:171-500,H:76-388^28.36%ID^E:2e-27^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^29-46^E:1.1`PF01535.17^PPR^PPR repeat^55-83^E:1.8e-06`PF01535.17^PPR^PPR repeat^86-113^E:0.018`PF01535.17^PPR^PPR repeat^189-215^E:0.021`PF01535.17^PPR^PPR repeat^218-247^E:7.2e-06`PF13041.3^PPR_2^PPR repeat family^246-294^E:6.9e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^246-295^E:0.0034`PF01535.17^PPR^PPR repeat^249-279^E:4.6e-07`PF01535.17^PPR^PPR repeat^322-348^E:0.0093`PF13041.3^PPR_2^PPR repeat family^348-395^E:1.7e-07`PF01535.17^PPR^PPR repeat^350-380^E:2e-05`PF01535.17^PPR^PPR repeat^386-413^E:0.053`PF01535.17^PPR^PPR repeat^422-446^E:0.0005",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G02750",".",".",".","."]
["TRINITY_DN119707_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.71924782470806,"0.00258145867047974","0.00371105012461921","TRINITY_DN119707_c0_g1_i1","GRC13_ARATH^GRC13_ARATH^Q:553-263,H:1-97^68.04%ID^E:6e-44^RecName: Full=Glutaredoxin-C13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN119707_c0_g1_i1.p1","254-553[-]","GRC13_ARATH^GRC13_ARATH^Q:1-97,H:1-97^68.04%ID^E:2e-45^RecName: Full=Glutaredoxin-C13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00462.21^Glutaredoxin^Glutaredoxin^13-75^E:6.4e-11",".",".","COG0695^Glutaredoxin","KEGG:ath:AT2G47880","GO:0005737^cellular_component^cytoplasm`GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN22383_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.7184528300606,"0.00487012592934274","0.00682874997814492","TRINITY_DN22383_c0_g1_i1","DIV_ANTMA^DIV_ANTMA^Q:886-347,H:1-198^53.77%ID^E:8e-63^RecName: Full=Transcription factor DIVARICATA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum",".","TRINITY_DN22383_c0_g1_i1.p1","218-964[-]","DIV_ANTMA^DIV_ANTMA^Q:27-206,H:1-198^53.77%ID^E:8e-64^RecName: Full=Transcription factor DIVARICATA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^47-93^E:8.6e-07`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^140-184^E:1.4e-10",".",".",".",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0048262^biological_process^determination of dorsal/ventral asymmetry`GO:0009908^biological_process^flower development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46854_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",1.69563935144771,"0.00387899321438371","0.00549301707552719","TRINITY_DN46854_c3_g1_i1","WRKY9_ARATH^WRKY9_ARATH^Q:2-322,H:223-323^74.77%ID^E:2e-46^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46854_c3_g1_i1.p1","2-817[+]","WRKY9_ARATH^WRKY9_ARATH^Q:1-150,H:223-360^64.67%ID^E:6e-58^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^13-71^E:1.1e-27",".",".","ENOG410Y9PF^WRKY transcription factor","KEGG:ath:AT1G68150","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN42470_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",1.67426555860829,"0.00031352228283997","0.000484436331734956","TRINITY_DN42470_c3_g4_i1","PP449_ARATH^PP449_ARATH^Q:1615-293,H:21-490^32.84%ID^E:7e-81^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42470_c3_g4_i1.p1","257-1657[-]","PP449_ARATH^PP449_ARATH^Q:15-455,H:21-490^32.84%ID^E:2e-82^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^70-116^E:0.0015`PF13041.3^PPR_2^PPR repeat family^174-219^E:1e-07`PF01535.17^PPR^PPR repeat^176-202^E:0.00046`PF01535.17^PPR^PPR repeat^249-273^E:0.01`PF13041.3^PPR_2^PPR repeat family^275-322^E:1.1e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^275-322^E:0.00038`PF01535.17^PPR^PPR repeat^278-306^E:5.2e-07`PF01535.17^PPR^PPR repeat^313-338^E:0.0025`PF01535.17^PPR^PPR repeat^349-373^E:0.19",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G66520","GO:0009507^cellular_component^chloroplast`GO:1900865^biological_process^chloroplast RNA modification`GO:0016554^biological_process^cytidine to uridine editing",".",".","."]
["TRINITY_DN44977_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",1.66732575527438,"0.00297536213344739","0.00425609054485659","TRINITY_DN44977_c1_g3_i1","PP419_ARATH^PP419_ARATH^Q:2277-691,H:48-576^53.4%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g46460, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP419_ARATH^PP419_ARATH^Q:568-170,H:560-697^41.78%ID^E:1e-17^RecName: Full=Pentatricopeptide repeat-containing protein At5g46460, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44977_c1_g3_i1.p1","625-2394[-]","PP419_ARATH^PP419_ARATH^Q:40-568,H:48-576^53.4%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g46460, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^64-84^E:0.42`PF01535.17^PPR^PPR repeat^91-121^E:1.2e-07`PF12854.4^PPR_1^PPR repeat^120-147^E:6.8e-06`PF01535.17^PPR^PPR repeat^122-148^E:8.9e-08`PF12854.4^PPR_1^PPR repeat^151-178^E:1.9e-05`PF01535.17^PPR^PPR repeat^154-183^E:4.1e-05`PF13041.3^PPR_2^PPR repeat family^182-230^E:3.7e-08`PF01535.17^PPR^PPR repeat^184-214^E:0.00076`PF13812.3^PPR_3^Pentatricopeptide repeat domain^280-325^E:0.0041`PF13041.3^PPR_2^PPR repeat family^282-327^E:3.7e-09`PF01535.17^PPR^PPR repeat^285-315^E:4.1e-06`PF13041.3^PPR_2^PPR repeat family^383-430^E:5e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^384-430^E:0.0012`PF01535.17^PPR^PPR repeat^386-416^E:4.4e-05`PF01535.17^PPR^PPR repeat^421-447^E:0.45`PF01535.17^PPR^PPR repeat^459-483^E:0.0094",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G46460","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN41823_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.64937574446313,"0.00898280241263127","0.012269969494941","TRINITY_DN41823_c0_g1_i4","RSLE2_ORYSJ^RSLE2_ORYSJ^Q:2343-796,H:42-563^27.36%ID^E:5e-67^RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`RSLE2_ORYSJ^RSLE2_ORYSJ^Q:692-393,H:601-703^46.6%ID^E:5e-67^RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN41823_c0_g1_i4.p1","1336-2367[-]","RSLE2_ORYSJ^RSLE2_ORYSJ^Q:9-338,H:42-386^28.98%ID^E:4e-37^RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02892.12^zf-BED^BED zinc finger^38-81^E:5.2e-05",".",".","ENOG410Y37V^transposon protein","KEGG:osa:4334009","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0009791^biological_process^post-embryonic development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN46369_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",1.64397875487515,"0.00170845738157153","0.00249228535930815","TRINITY_DN46369_c0_g6_i1","LAC9_ORYSJ^LAC9_ORYSJ^Q:1970-342,H:6-568^46.83%ID^E:4e-179^RecName: Full=Putative laccase-9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46369_c0_g6_i1.p1","273-2036[-]","LAC9_ORYSJ^LAC9_ORYSJ^Q:32-576,H:15-579^48.34%ID^E:0^RecName: Full=Putative laccase-9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF07732.12^Cu-oxidase_3^Multicopper oxidase^53-165^E:6.9e-39`PF00394.19^Cu-oxidase^Multicopper oxidase^178-307^E:1.8e-32`PF07731.11^Cu-oxidase_2^Multicopper oxidase^447-559^E:3.1e-38",".",".","COG2132^Multicopper oxidase",".","GO:0048046^cellular_component^apoplast`GO:0005507^molecular_function^copper ion binding`GO:0052716^molecular_function^hydroquinone:oxygen oxidoreductase activity`GO:0016722^molecular_function^oxidoreductase activity, oxidizing metal ions`GO:0046274^biological_process^lignin catabolic process","GO:0005507^molecular_function^copper ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46887_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.64229954271173,"0.00395035967598106","0.00558974261096472","TRINITY_DN46887_c1_g1_i2","OXI1_ARATH^OXI1_ARATH^Q:938-462,H:154-338^52.43%ID^E:1e-85^RecName: Full=Serine/threonine-protein kinase OXI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`OXI1_ARATH^OXI1_ARATH^Q:1356-934,H:12-154^61.54%ID^E:1e-85^RecName: Full=Serine/threonine-protein kinase OXI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46887_c1_g1_i2.p1","811-1383[-]","OXI1_ARATH^OXI1_ARATH^Q:10-150,H:12-154^61.54%ID^E:1e-51^RecName: Full=Serine/threonine-protein kinase OXI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03989.10^DNA_gyraseA_C^DNA gyrase C-terminal domain, beta-propeller^13-40^E:0.22`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^16-150^E:2.4e-07`PF00069.22^Pkinase^Protein kinase domain^17-150^E:3e-18",".",".","ENOG410XQ0C^serine threonine-protein kinase","KEGG:ath:AT3G25250","GO:0005737^cellular_component^cytoplasm`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity`GO:0004672^molecular_function^protein kinase activity`GO:0019901^molecular_function^protein kinase binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006952^biological_process^defense response`GO:0035556^biological_process^intracellular signal transduction`GO:0006468^biological_process^protein phosphorylation`GO:0006979^biological_process^response to oxidative stress`GO:0009611^biological_process^response to wounding","GO:0003677^molecular_function^DNA binding`GO:0003916^molecular_function^DNA topoisomerase activity`GO:0005524^molecular_function^ATP binding`GO:0006265^biological_process^DNA topological change`GO:0005694^cellular_component^chromosome`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46728_c4_g6","leaves S. abrotanoides","roots S. abrotanoides",1.63214815601872,"0.00108332040331188","0.00160592045278742","TRINITY_DN46728_c4_g6_i1","PP301_ARATH^PP301_ARATH^Q:2459-615,H:63-674^38.05%ID^E:3e-157^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP301_ARATH^PP301_ARATH^Q:1823-930,H:58-369^23.15%ID^E:1e-22^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46728_c4_g6_i1.p1","534-2549[-]","PP301_ARATH^PP301_ARATH^Q:31-645,H:63-674^38.05%ID^E:4e-160^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP301_ARATH^PP301_ARATH^Q:243-540,H:58-369^23.15%ID^E:7e-23^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^39-62^E:0.079`PF13041.3^PPR_2^PPR repeat family^62-93^E:1.9e-08`PF01535.17^PPR^PPR repeat^64-93^E:8.9e-09`PF13041.3^PPR_2^PPR repeat family^93-123^E:2.3e-07`PF12854.4^PPR_1^PPR repeat^93-121^E:4e-07`PF01535.17^PPR^PPR repeat^95-124^E:2.1e-08`PF01535.17^PPR^PPR repeat^126-154^E:2.6e-06`PF01535.17^PPR^PPR repeat^157-186^E:0.00016`PF01535.17^PPR^PPR repeat^189-217^E:0.00014`PF01535.17^PPR^PPR repeat^220-247^E:1e-05`PF01535.17^PPR^PPR repeat^251-278^E:9.3e-05`PF01535.17^PPR^PPR repeat^282-308^E:0.079`PF01535.17^PPR^PPR repeat^312-338^E:0.011`PF01535.17^PPR^PPR repeat^344-372^E:0.0065`PF01535.17^PPR^PPR repeat^416-439^E:0.036`PF13041.3^PPR_2^PPR repeat family^442-489^E:3.6e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^442-488^E:0.009`PF01535.17^PPR^PPR repeat^444-472^E:2.1e-06`PF01535.17^PPR^PPR repeat^480-507^E:1.4`PF01535.17^PPR^PPR repeat^516-544^E:5e-05`PF01535.17^PPR^PPR repeat^586-614^E:0.66",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G02750",".",".",".","."]
["TRINITY_DN46540_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.61176395416511,"0.000206657467903674","0.00032382840879006","TRINITY_DN46540_c0_g1_i1","PP261_ARATH^PP261_ARATH^Q:192-1979,H:26-593^36.06%ID^E:2e-132^RecName: Full=Pentatricopeptide repeat-containing protein At3g29230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46540_c0_g1_i1.p1","168-2021[+]","PP261_ARATH^PP261_ARATH^Q:9-604,H:26-593^36.06%ID^E:7e-134^RecName: Full=Pentatricopeptide repeat-containing protein At3g29230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^167-196^E:0.0071`PF01535.17^PPR^PPR repeat^198-227^E:1.4e-06`PF12854.4^PPR_1^PPR repeat^226-254^E:6.7e-06`PF13041.3^PPR_2^PPR repeat family^227-259^E:9.7e-08`PF01535.17^PPR^PPR repeat^229-258^E:8.2e-08`PF01535.17^PPR^PPR repeat^261-290^E:4.4e-05`PF13041.3^PPR_2^PPR repeat family^288-336^E:1.2e-09`PF01535.17^PPR^PPR repeat^291-320^E:1.2e-07`PF01535.17^PPR^PPR repeat^365-390^E:0.039`PF13041.3^PPR_2^PPR repeat family^391-437^E:4.9e-08`PF01535.17^PPR^PPR repeat^393-422^E:4.9e-07`PF01535.17^PPR^PPR repeat^429-455^E:0.023`PF01535.17^PPR^PPR repeat^465-493^E:0.025",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G29230",".",".",".","."]
["TRINITY_DN38197_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.60076458585891,"0.000260149806021766","0.000404455921097713","TRINITY_DN38197_c0_g1_i1","PP240_ARATH^PP240_ARATH^Q:2189-312,H:50-675^53.83%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g18020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38197_c0_g1_i1.p1","261-2330[-]","PP240_ARATH^PP240_ARATH^Q:48-673,H:50-675^53.83%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g18020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12854.4^PPR_1^PPR repeat^157-186^E:2.1e-05`PF13041.3^PPR_2^PPR repeat family^158-206^E:5e-12`PF01535.17^PPR^PPR repeat^162-190^E:7.7e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^186-240^E:7.5e-10`PF12854.4^PPR_1^PPR repeat^189-221^E:2.7e-11`PF13041.3^PPR_2^PPR repeat family^193-237^E:4.6e-14`PF01535.17^PPR^PPR repeat^196-226^E:2.5e-08`PF01535.17^PPR^PPR repeat^272-296^E:0.12`PF13041.3^PPR_2^PPR repeat family^306-352^E:1.9e-08`PF01535.17^PPR^PPR repeat^307-336^E:0.32`PF12854.4^PPR_1^PPR repeat^334-365^E:8.7e-09`PF13041.3^PPR_2^PPR repeat family^338-387^E:1.4e-11`PF01535.17^PPR^PPR repeat^341-369^E:0.00019`PF12854.4^PPR_1^PPR repeat^441-471^E:7.7e-11`PF13041.3^PPR_2^PPR repeat family^443-492^E:3.2e-14`PF01535.17^PPR^PPR repeat^447-472^E:4.1e-06`PF13041.3^PPR_2^PPR repeat family^479-529^E:8.5e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^479-525^E:1.4e-05`PF01535.17^PPR^PPR repeat^482-505^E:0.11`PF13041.3^PPR_2^PPR repeat family^515-563^E:6.8e-14`PF01535.17^PPR^PPR repeat^518-548^E:1.8e-06`PF13041.3^PPR_2^PPR repeat family^586-634^E:3.8e-09`PF01535.17^PPR^PPR repeat^589-618^E:0.045`PF13812.3^PPR_3^Pentatricopeptide repeat domain^609-660^E:0.00064`PF12854.4^PPR_1^PPR repeat^617-649^E:1.1e-05`PF13041.3^PPR_2^PPR repeat family^621-663^E:3.4e-09`PF01535.17^PPR^PPR repeat^623-653^E:2.1e-05",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G18020",".",".",".","."]
["TRINITY_DN45495_c3_g7","leaves S. abrotanoides","roots S. abrotanoides",1.59348251760148,"0.000859804231574475","0.00128613674605068","TRINITY_DN45495_c3_g7_i1","PP343_ARATH^PP343_ARATH^Q:157-1920,H:23-607^48.9%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g31070, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45495_c3_g7_i1.p1","103-1923[+]","PP343_ARATH^PP343_ARATH^Q:5-606,H:11-607^48.6%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g31070, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^94-119^E:0.015`PF12854.4^PPR_1^PPR repeat^119-147^E:6.8e-06`PF01535.17^PPR^PPR repeat^122-151^E:2.1e-08`PF01535.17^PPR^PPR repeat^196-222^E:0.33`PF13041.3^PPR_2^PPR repeat family^324-372^E:1.2e-08`PF01535.17^PPR^PPR repeat^326-357^E:0.0014`PF01535.17^PPR^PPR repeat^400-427^E:0.00051`PF01535.17^PPR^PPR repeat^428-457^E:5.3e-05`PF01535.17^PPR^PPR repeat^503-527^E:0.55",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G31070","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN43142_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.5914493645456,"0.00106535163663451","0.00158065257184453","TRINITY_DN43142_c0_g1_i4","CACLC_ARATH^CACLC_ARATH^Q:83-442,H:528-647^69.17%ID^E:5e-52^RecName: Full=Anoctamin-like protein At1g73020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43142_c0_g1_i4.p1","128-493[+]","CACLC_ARATH^CACLC_ARATH^Q:2-105,H:544-647^71.15%ID^E:9e-49^RecName: Full=Anoctamin-like protein At1g73020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04547.9^Anoctamin^Calcium-activated chloride channel^2-85^E:2.1e-19",".",".","ENOG410XPYE^Anoctamin","KEGG:ath:AT1G73020","GO:0034707^cellular_component^chloride channel complex`GO:0005254^molecular_function^chloride channel activity",".",".","."]
["TRINITY_DN42705_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.58801395375641,{"v":6632403743.56277,"d":"6.63E+09"},"0.00010750272979163","TRINITY_DN42705_c0_g1_i1","FBK67_ARATH^FBK67_ARATH^Q:1427-372,H:13-360^33.06%ID^E:3e-41^RecName: Full=F-box/kelch-repeat protein At3g23880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42705_c0_g1_i1.p1","339-1544[-]","FBK67_ARATH^FBK67_ARATH^Q:40-391,H:13-360^32.96%ID^E:2e-44^RecName: Full=F-box/kelch-repeat protein At3g23880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12937.4^F-box-like^F-box-like^39-74^E:5.8e-06`PF00646.30^F-box^F-box domain^40-76^E:2.6e-09",".",".","ENOG410Z2HM^F-box Kelch-repeat protein","KEGG:ath:AT3G23880","GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN89256_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.58341293265978,"0.00254785380898759","0.00366543453039336","TRINITY_DN89256_c0_g1_i1","PP169_ARATH^PP169_ARATH^Q:129-1952,H:58-667^40.62%ID^E:1e-155^RecName: Full=Pentatricopeptide repeat-containing protein At2g22410, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN89256_c0_g1_i1.p1","24-2012[+]","PP169_ARATH^PP169_ARATH^Q:36-643,H:58-667^40.62%ID^E:4e-157^RecName: Full=Pentatricopeptide repeat-containing protein At2g22410, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^93-141^E:0.0024`PF13041.3^PPR_2^PPR repeat family^94-142^E:7.7e-09`PF01535.17^PPR^PPR repeat^98-127^E:0.00017`PF13041.3^PPR_2^PPR repeat family^197-243^E:3e-11`PF12854.4^PPR_1^PPR repeat^197-225^E:6e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^197-243^E:0.00031`PF01535.17^PPR^PPR repeat^199-229^E:8.4e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^260-297^E:0.0024`PF01535.17^PPR^PPR repeat^272-299^E:0.00072`PF01535.17^PPR^PPR repeat^300-323^E:0.0001`PF13041.3^PPR_2^PPR repeat family^328-375^E:2.6e-08`PF01535.17^PPR^PPR repeat^331-358^E:1.7e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^389-431^E:0.00026`PF01535.17^PPR^PPR repeat^403-431^E:1.4e-06`PF13041.3^PPR_2^PPR repeat family^429-478^E:4e-13`PF13812.3^PPR_3^Pentatricopeptide repeat domain^430-476^E:5.9e-05`PF01535.17^PPR^PPR repeat^432-462^E:3e-06`PF01535.17^PPR^PPR repeat^467-493^E:0.05`PF01535.17^PPR^PPR repeat^505-529^E:0.004",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G22410","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN32547_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.58123421140657,{"v":850721545.18758,"d":"8.51E+08"},"0.000136934564259767","TRINITY_DN32547_c0_g1_i1","PP189_ARATH^PP189_ARATH^Q:2198-348,H:2-623^50.48%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g36980, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32547_c0_g1_i1.p1","321-2204[-]","PP189_ARATH^PP189_ARATH^Q:3-619,H:2-623^50.48%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g36980, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^35-79^E:1.8e-11`PF01535.17^PPR^PPR repeat^37-67^E:3.2e-05`PF01535.17^PPR^PPR repeat^110-133^E:0.016`PF01535.17^PPR^PPR repeat^138-163^E:0.19`PF13041.3^PPR_2^PPR repeat family^168-214^E:2.2e-07`PF01535.17^PPR^PPR repeat^170-195^E:1.3e-05`PF01535.17^PPR^PPR repeat^270-299^E:1.2e-06`PF13041.3^PPR_2^PPR repeat family^298-345^E:3.7e-07`PF01535.17^PPR^PPR repeat^301-330^E:1.6e-06`PF13041.3^PPR_2^PPR repeat family^399-443^E:1.3e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^400-446^E:0.0024`PF01535.17^PPR^PPR repeat^402-431^E:0.00079`PF01535.17^PPR^PPR repeat^542-571^E:0.96",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G36980","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN41830_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.5781719100158,"0.0059346471752626","0.00825376827671368","TRINITY_DN41830_c0_g1_i3","PEK13_ARATH^PEK13_ARATH^Q:1128-268,H:341-631^41.44%ID^E:5e-64^RecName: Full=Proline-rich receptor-like protein kinase PERK13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41830_c0_g1_i3.p1","220-2076[-]","PEK13_ARATH^PEK13_ARATH^Q:317-603,H:341-631^41.44%ID^E:5e-65^RecName: Full=Proline-rich receptor-like protein kinase PERK13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^331-595^E:4.3e-37`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^332-596^E:4.2e-36",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G70460","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN35404_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.57814907654705,{"v":9190987622.06672,"d":"9.19E+09"},"0.000147593721589874","TRINITY_DN35404_c0_g1_i1","PP350_ARATH^PP350_ARATH^Q:338-2557,H:69-804^54.12%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g35130, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35404_c0_g1_i1.p1","23-2560[+]","PP350_ARATH^PP350_ARATH^Q:29-845,H:18-804^50.98%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g35130, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^111-131^E:0.28`PF13041.3^PPR_2^PPR repeat family^132-178^E:3.7e-09`PF01535.17^PPR^PPR repeat^134-162^E:5.7e-06`PF01535.17^PPR^PPR repeat^204-231^E:0.00032`PF01535.17^PPR^PPR repeat^234-263^E:0.00015`PF01535.17^PPR^PPR repeat^335-363^E:0.0027`PF01535.17^PPR^PPR repeat^410-436^E:0.039`PF01535.17^PPR^PPR repeat^438-464^E:0.00038`PF13812.3^PPR_3^Pentatricopeptide repeat domain^501-546^E:0.0068`PF01535.17^PPR^PPR repeat^511-535^E:0.0005`PF13041.3^PPR_2^PPR repeat family^536-583^E:4.4e-08`PF01535.17^PPR^PPR repeat^539-568^E:0.0029`PF01535.17^PPR^PPR repeat^575-602^E:0.0014`PF01535.17^PPR^PPR repeat^611-635^E:0.028`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^712-835^E:1.6e-19",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G35130","GO:0009507^cellular_component^chloroplast","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN42962_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",1.57135252575187,"0.00213036769462251","0.00308442029903597","TRINITY_DN42962_c0_g3_i1","CKX1_ARATH^CKX1_ARATH^Q:1095-259,H:266-544^62.37%ID^E:9e-130^RecName: Full=Cytokinin dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42962_c0_g3_i1.p1","250-1182[-]","CKX1_ARATH^CKX1_ARATH^Q:30-308,H:266-544^62.37%ID^E:4e-131^RecName: Full=Cytokinin dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF09265.7^Cytokin-bind^Cytokinin dehydrogenase 1, FAD and cytokinin binding^29-303^E:3e-110",".",".","COG0277^FAD linked oxidase domain protein","KEGG:ath:AT2G41510`KO:K00279","GO:0005773^cellular_component^vacuole`GO:0019139^molecular_function^cytokinin dehydrogenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors`GO:0009823^biological_process^cytokinin catabolic process`GO:0048507^biological_process^meristem development","GO:0019139^molecular_function^cytokinin dehydrogenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0009690^biological_process^cytokinin metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45396_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.56277625421545,"0.000506534079887449","0.000770793148627841","TRINITY_DN45396_c0_g2_i1","PP144_ARATH^PP144_ARATH^Q:82-1911,H:8-610^48.04%ID^E:3e-178^RecName: Full=Pentatricopeptide repeat-containing protein At2g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45396_c0_g2_i1.p1","79-1929[+]","PP144_ARATH^PP144_ARATH^Q:2-611,H:8-610^48.04%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^101-123^E:0.01`PF01535.17^PPR^PPR repeat^197-223^E:0.0031`PF01535.17^PPR^PPR repeat^270-294^E:0.28`PF01535.17^PPR^PPR repeat^299-328^E:2.2e-05`PF12854.4^PPR_1^PPR repeat^329-360^E:3.1e-06`PF13041.3^PPR_2^PPR repeat family^333-379^E:3.7e-08`PF01535.17^PPR^PPR repeat^336-364^E:3.7e-08`PF13041.3^PPR_2^PPR repeat family^439-482^E:1.8e-13`PF01535.17^PPR^PPR repeat^440-467^E:1.3e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^440-482^E:7.7e-06`PF01535.17^PPR^PPR repeat^473-496^E:0.39`PF01535.17^PPR^PPR repeat^512-532^E:0.019",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G02750",".",".",".","."]
["TRINITY_DN46861_c2_g5","leaves S. abrotanoides","roots S. abrotanoides",1.54405999934011,"0.000846127623981542","0.00126657807508263","TRINITY_DN46861_c2_g5_i1","AATPC_ARATH^AATPC_ARATH^Q:171-1358,H:38-443^51.58%ID^E:2e-150^RecName: Full=AAA-ATPase At3g50940;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46861_c2_g5_i1.p1","3-1376[+]","AATPC_ARATH^AATPC_ARATH^Q:49-452,H:30-443^51.07%ID^E:4e-154^RecName: Full=AAA-ATPase At3g50940;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14363.3^AAA_assoc^Domain associated at C-terminal with AAA^56-143^E:7.9e-17`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^262-388^E:2.5e-18",".",".","COG0465^Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)","KEGG:ath:AT3G50940","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0009651^biological_process^response to salt stress","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN15500_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.54356135538748,"0.000460528543702793","0.00070262163540303","TRINITY_DN15500_c0_g1_i1","U89B2_STERE^U89B2_STERE^Q:164-1555,H:7-467^57.42%ID^E:2e-180^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia",".","TRINITY_DN15500_c0_g1_i1.p1","143-1564[+]","U89B2_STERE^U89B2_STERE^Q:8-471,H:7-467^57.42%ID^E:0^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^270-402^E:7.3e-20",".",".",".",".","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45350_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.54312599324908,"0.00461999456408048","0.00649131875151192","TRINITY_DN45350_c0_g2_i6","PGLR2_CRYJA^PGLR2_CRYJA^Q:913-344,H:272-401^26.18%ID^E:3e-27^RecName: Full=Polygalacturonase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Cupressales; Cupressaceae; Cryptomeria`PGLR2_CRYJA^PGLR2_CRYJA^Q:1416-1207,H:185-254^38.57%ID^E:3e-27^RecName: Full=Polygalacturonase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Cupressales; Cupressaceae; Cryptomeria`PGLR2_CRYJA^PGLR2_CRYJA^Q:1106-1026,H:254-280^62.96%ID^E:3e-27^RecName: Full=Polygalacturonase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Cupressales; Cupressaceae; Cryptomeria",".","TRINITY_DN45350_c0_g2_i6.p1","1084-1479[-]","PGLR3_ARATH^PGLR3_ARATH^Q:22-91,H:140-209^50%ID^E:6e-17^RecName: Full=Probable polygalacturonase At3g15720;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00295.14^Glyco_hydro_28^Glycosyl hydrolases family 28^21-92^E:1e-15","sigP:1^28^0.558^YES",".","COG5434^Glycoside hydrolase family 28",".","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005576^cellular_component^extracellular region`GO:0009505^cellular_component^plant-type cell wall`GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization","GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47241_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",1.52248920770916,"0.00043416234451865","0.000663208048641872","TRINITY_DN47241_c1_g2_i2","GSO2_ARATH^GSO2_ARATH^Q:921-1886,H:242-612^29.22%ID^E:3e-36^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1879-2061,H:610-670^47.54%ID^E:3e-36^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:921-1868,H:146-467^31.31%ID^E:2e-31^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1879-2058,H:467-526^45%ID^E:2e-31^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:921-1886,H:339-684^28.25%ID^E:1e-27^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1879-2061,H:706-766^50.82%ID^E:1e-27^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1017-1868,H:130-393^28.97%ID^E:9e-26^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1879-2061,H:419-479^40.98%ID^E:9e-26^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:915-1871,H:505-824^30.79%ID^E:1e-23^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:915-1886,H:481-805^27.84%ID^E:2e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1158-1829,H:75-329^28.4%ID^E:3e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1879-2061,H:322-383^38.71%ID^E:3e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:918-1631,H:625-833^31.25%ID^E:1e-11^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:930-1349,H:701-837^30.5%ID^E:9e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1879-2058,H:754-814^47.54%ID^E:1e-06^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47241_c1_g2_i2.p2","130-954[+]","RLP12_ARATH^RLP12_ARATH^Q:33-253,H:34-293^28.41%ID^E:1e-13^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^36-76^E:3.9e-12`PF13516.3^LRR_6^Leucine Rich repeat^112-126^E:0.3`PF13855.3^LRR_8^Leucine rich repeat^137-193^E:2.8e-07`PF00560.30^LRR_1^Leucine Rich Repeat^137-159^E:1.4`PF13516.3^LRR_6^Leucine Rich repeat^159-173^E:0.12`PF00560.30^LRR_1^Leucine Rich Repeat^161-183^E:0.76","sigP:1^29^0.518^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G71400","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45853_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",1.51376660565034,"0.00627604684661021","0.00870602790277241","TRINITY_DN45853_c3_g4_i2","TIC55_PEA^TIC55_PEA^Q:1-765,H:156-405^75.29%ID^E:9e-141^RecName: Full=Protein TIC 55, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN45853_c3_g4_i2.p1","1-765[+]","TIC55_PEA^TIC55_PEA^Q:1-255,H:156-405^75.29%ID^E:8e-141^RecName: Full=Protein TIC 55, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00355.23^Rieske^Rieske [2Fe-2S] domain^4-31^E:1.4e-05`PF08417.9^PaO^Pheophorbide a oxygenase^156-242^E:1.2e-16",".",".",".",".","GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0010277^molecular_function^chlorophyllide a oxygenase [overall] activity`GO:0046872^molecular_function^metal ion binding`GO:0015031^biological_process^protein transport","GO:0016491^molecular_function^oxidoreductase activity`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0055114^biological_process^oxidation-reduction process`GO:0010277^molecular_function^chlorophyllide a oxygenase [overall] activity",".","."]
["TRINITY_DN45297_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.50747698138291,"0.000137907126915572","0.000218739044041306","TRINITY_DN45297_c0_g1_i1","PXL2_ARATH^PXL2_ARATH^Q:1745-3160,H:539-1011^64.23%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:141-1760,H:12-543^60.44%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:456-1487,H:229-596^32.88%ID^E:6e-39^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:837-1781,H:71-406^34.81%ID^E:1e-23^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45297_c0_g1_i1.p1","93-1763[+]","PXL1_ARATH^PXL1_ARATH^Q:12-549,H:7-544^62.48%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL1_ARATH^PXL1_ARATH^Q:208-550,H:84-426^34.11%ID^E:2e-48^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL1_ARATH^PXL1_ARATH^Q:73-428,H:258-644^33.08%ID^E:5e-41^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL1_ARATH^PXL1_ARATH^Q:249-550,H:77-378^30.79%ID^E:8e-32^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL1_ARATH^PXL1_ARATH^Q:368-550,H:76-258^30.6%ID^E:3e-16^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^34-78^E:3.8e-07`PF13855.3^LRR_8^Leucine rich repeat^85-140^E:1.1e-07`PF00560.30^LRR_1^Leucine Rich Repeat^106-127^E:1.6`PF00560.30^LRR_1^Leucine Rich Repeat^179-200^E:0.82`PF13516.3^LRR_6^Leucine Rich repeat^297-312^E:0.29`PF00560.30^LRR_1^Leucine Rich Repeat^371-390^E:0.15`PF13516.3^LRR_6^Leucine Rich repeat^535-550^E:1.6","sigP:1^27^0.589^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT1G08590","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0030154^biological_process^cell differentiation`GO:0010067^biological_process^procambium histogenesis`GO:0001944^biological_process^vasculature development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN27920_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.49722324120076,"0.000141256544061644","0.000223805354743969","TRINITY_DN27920_c0_g1_i1","RPS2_ARATH^RPS2_ARATH^Q:2434-164,H:141-907^47.66%ID^E:0^RecName: Full=Disease resistance protein RPS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN27920_c0_g1_i1.p1","155-2374[-]","RPS2_ARATH^RPS2_ARATH^Q:1-737,H:161-907^47.99%ID^E:0^RecName: Full=Disease resistance protein RPS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^2-273^E:2.7e-78`PF13855.3^LRR_8^Leucine rich repeat^364-424^E:4.7e-12`PF13855.3^LRR_8^Leucine rich repeat^415-466^E:1.7e-06",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G26090`KO:K13459","GO:0005737^cellular_component^cytoplasm`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response`GO:0042742^biological_process^defense response to bacterium`GO:0016045^biological_process^detection of bacterium`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45186_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",1.49414168119024,"0.000128201758067815","0.000203781780993265","TRINITY_DN45186_c2_g1_i4","WTR10_ARATH^WTR10_ARATH^Q:52-279,H:252-327^55.26%ID^E:4e-19^RecName: Full=WAT1-related protein At1g68170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45186_c2_g1_i4.p1","73-462[+]","WTR10_ARATH^WTR10_ARATH^Q:6-69,H:264-327^59.38%ID^E:5e-20^RecName: Full=WAT1-related protein At1g68170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YFQG^auxin-induced protein 5NG4-like","KEGG:ath:AT1G68170","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN44242_c6_g2","leaves S. abrotanoides","roots S. abrotanoides",1.48533870400056,"0.00349141056095159","0.0049662508643986","TRINITY_DN44242_c6_g2_i2","TBL42_ARATH^TBL42_ARATH^Q:1048-548,H:38-208^57.8%ID^E:4e-70^RecName: Full=Protein trichome birefringence-like 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TBL42_ARATH^TBL42_ARATH^Q:465-313,H:209-259^58.82%ID^E:4e-70^RecName: Full=Protein trichome birefringence-like 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44242_c6_g2_i2.p1","545-1198[-]","TBL38_ARATH^TBL38_ARATH^Q:45-214,H:55-229^54.29%ID^E:2e-65^RecName: Full=Protein trichome birefringence-like 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14416.3^PMR5N^PMR5 N terminal Domain^50-102^E:1.9e-23`PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^103-213^E:5.2e-32","sigP:1^40^0.519^YES",".","ENOG410YAJT^function domain containing protein, expressed","KEGG:ath:AT1G29050","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:0071554^biological_process^cell wall organization or biogenesis",".",".","."]
["TRINITY_DN45396_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",1.48368744244339,"0.00323813599818617","0.00461653970106377","TRINITY_DN45396_c0_g4_i1","PP188_ARATH^PP188_ARATH^Q:287-1327,H:23-368^42%ID^E:1e-86^RecName: Full=Pentatricopeptide repeat-containing protein At2g36730;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45396_c0_g4_i1.p1","128-1327[+]","PP188_ARATH^PP188_ARATH^Q:54-400,H:23-368^42%ID^E:3e-87^RecName: Full=Pentatricopeptide repeat-containing protein At2g36730;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^107-155^E:1e-07`PF01535.17^PPR^PPR repeat^110-139^E:0.012`PF01535.17^PPR^PPR repeat^183-209^E:0.061`PF13041.3^PPR_2^PPR repeat family^209-256^E:4.1e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^209-256^E:0.0012`PF01535.17^PPR^PPR repeat^212-241^E:1.5e-06`PF01535.17^PPR^PPR repeat^284-311^E:0.019`PF12854.4^PPR_1^PPR repeat^309-338^E:1.7e-05`PF13041.3^PPR_2^PPR repeat family^310-358^E:1.2e-11`PF01535.17^PPR^PPR repeat^313-341^E:8.2e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^333-392^E:0.0015`PF01535.17^PPR^PPR repeat^352-374^E:0.037",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G36730",".",".",".","."]
["TRINITY_DN43800_c4_g7","leaves S. abrotanoides","roots S. abrotanoides",1.48358762169524,"0.000267478534994872","0.000415519641672694","TRINITY_DN43800_c4_g7_i1","PPR75_ARATH^PPR75_ARATH^Q:130-1422,H:17-459^45.27%ID^E:1e-117^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR75_ARATH^PPR75_ARATH^Q:52-1206,H:82-490^28.67%ID^E:2e-33^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43800_c4_g7_i1.p1","28-1422[+]","PPR75_ARATH^PPR75_ARATH^Q:35-465,H:17-459^45.27%ID^E:3e-126^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR75_ARATH^PPR75_ARATH^Q:9-393,H:82-490^28.67%ID^E:2e-39^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^82-125^E:9.5e-05`PF01535.17^PPR^PPR repeat^151-177^E:0.0036`PF13812.3^PPR_3^Pentatricopeptide repeat domain^176-209^E:0.0052`PF13041.3^PPR_2^PPR repeat family^177-214^E:6.1e-09`PF01535.17^PPR^PPR repeat^179-209^E:2.8e-08`PF01535.17^PPR^PPR repeat^251-276^E:0.1`PF01535.17^PPR^PPR repeat^281-307^E:0.00062`PF01535.17^PPR^PPR repeat^351-376^E:0.00013`PF13041.3^PPR_2^PPR repeat family^376-424^E:1.1e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^377-423^E:6.8e-06`PF01535.17^PPR^PPR repeat^381-409^E:0.00011`PF01535.17^PPR^PPR repeat^414-441^E:0.1",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G50270",".",".",".","."]
["TRINITY_DN11478_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.45885480324769,"0.00748538131480351","0.0103011456700806","TRINITY_DN11478_c0_g1_i1","RNF6_MOUSE^RNF6_MOUSE^Q:391-251,H:613-655^42.55%ID^E:6e-07^RecName: Full=E3 ubiquitin-protein ligase RNF6;^Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus",".","TRINITY_DN11478_c0_g1_i1.p1","218-991[-]","RNG1L_ARATH^RNG1L_ARATH^Q:197-254,H:211-264^44.83%ID^E:2e-10^RecName: Full=E3 ubiquitin-protein ligase RING1-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^202-247^E:1.8e-10`PF17123.2^zf-RING_11^RING-like zinc finger^202-233^E:4.7e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^202-246^E:5.8e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^202-244^E:2.2e-05",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT3G19950`KO:K11982","GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN45762_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",1.44932319960001,"0.00573817460052784","0.00799229069614719","TRINITY_DN45762_c2_g1_i1","Y2267_ARATH^Y2267_ARATH^Q:2081-336,H:23-612^34.74%ID^E:7e-87^RecName: Full=Probable inactive receptor kinase At2g26730;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45762_c2_g1_i1.p1","246-2222[-]","Y2267_ARATH^Y2267_ARATH^Q:32-629,H:7-612^35.13%ID^E:2e-93^RecName: Full=Probable inactive receptor kinase At2g26730;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^54-94^E:1.9e-06`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^373-630^E:9e-25`PF00069.22^Pkinase^Protein kinase domain^373-629^E:6.8e-24",".",".","ENOG4111F0S^inactive receptor kinase","KEGG:ath:AT2G26730","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46870_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",1.42781985848521,"0.00121670027605642","0.00179673751061063","TRINITY_DN46870_c1_g3_i2","LNG2_ARATH^LNG2_ARATH^Q:3089-177,H:4-902^29.21%ID^E:3e-68^RecName: Full=Protein LONGIFOLIA 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46870_c1_g3_i2.p1","126-3083[-]","LNG2_ARATH^LNG2_ARATH^Q:1-969,H:6-902^30.28%ID^E:5e-78^RecName: Full=Protein LONGIFOLIA 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14383.3^VARLMGL^DUF761-associated sequence motif^258-282^E:1.1e-06`PF14309.3^DUF4378^Domain of unknown function (DUF4378)^800-968^E:3.7e-29",".",".","ENOG411078I^NA","KEGG:ath:AT3G02170","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0008017^molecular_function^microtubule binding`GO:0051513^biological_process^regulation of monopolar cell growth",".",".","."]
["TRINITY_DN28063_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.42723818903387,"0.0122555521792923","0.0165032596668582","TRINITY_DN28063_c0_g1_i1","PP224_ARATH^PP224_ARATH^Q:218-1567,H:19-469^51.77%ID^E:3e-168^RecName: Full=Pentatricopeptide repeat-containing protein At3g12770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP224_ARATH^PP224_ARATH^Q:218-1345,H:116-498^28.2%ID^E:2e-46^RecName: Full=Pentatricopeptide repeat-containing protein At3g12770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28063_c0_g1_i1.p1","98-1567[+]","PP224_ARATH^PP224_ARATH^Q:29-490,H:10-469^51.29%ID^E:9e-170^RecName: Full=Pentatricopeptide repeat-containing protein At3g12770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP224_ARATH^PP224_ARATH^Q:40-416,H:115-498^28.12%ID^E:3e-47^RecName: Full=Pentatricopeptide repeat-containing protein At3g12770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^106-151^E:1.5e-07`PF01535.17^PPR^PPR repeat^108-133^E:0.00033`PF13041.3^PPR_2^PPR repeat family^205-244^E:7e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^206-243^E:9.4e-05`PF01535.17^PPR^PPR repeat^208-238^E:3.2e-08`PF01535.17^PPR^PPR repeat^283-307^E:0.0073`PF13041.3^PPR_2^PPR repeat family^307-347^E:2.2e-11`PF12854.4^PPR_1^PPR repeat^307-334^E:2.3e-06`PF01535.17^PPR^PPR repeat^311-339^E:4.9e-07`PF01535.17^PPR^PPR repeat^382-402^E:0.042`PF13041.3^PPR_2^PPR repeat family^407-455^E:2.6e-09`PF01535.17^PPR^PPR repeat^411-439^E:6.6e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^431-478^E:0.0038`PF01535.17^PPR^PPR repeat^445-472^E:0.002",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G12770",".",".",".","."]
["TRINITY_DN35713_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.422186827228,"0.00666518126240836","0.00921827660530977","TRINITY_DN35713_c0_g1_i1","PP251_ARATH^PP251_ARATH^Q:376-2091,H:22-586^35.36%ID^E:7e-103^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35713_c0_g1_i1.p1","289-2094[+]","PP251_ARATH^PP251_ARATH^Q:30-601,H:22-586^35.36%ID^E:7e-111^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^78-126^E:1.2e-07`PF01535.17^PPR^PPR repeat^81-109^E:0.0011`PF13041.3^PPR_2^PPR repeat family^212-255^E:9.5e-08`PF01535.17^PPR^PPR repeat^215-242^E:6.6e-05`PF01535.17^PPR^PPR repeat^287-312^E:0.01`PF01535.17^PPR^PPR repeat^322-350^E:1.5e-06`PF01535.17^PPR^PPR repeat^394-419^E:0.028`PF13041.3^PPR_2^PPR repeat family^423-469^E:6.6e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^423-469^E:0.003`PF01535.17^PPR^PPR repeat^425-455^E:1.5e-07`PF01535.17^PPR^PPR repeat^460-486^E:0.5",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G23330",".",".",".","."]
["TRINITY_DN46297_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",1.41390916924295,"0.00162828337935579","0.00238001941800467","TRINITY_DN46297_c2_g4_i1","IQD14_ARATH^IQD14_ARATH^Q:1034-288,H:321-589^27.99%ID^E:3e-17^RecName: Full=Protein IQ-DOMAIN 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46297_c2_g4_i1.p1","141-1340[-]","IQD14_ARATH^IQD14_ARATH^Q:103-351,H:321-589^27.53%ID^E:2e-17^RecName: Full=Protein IQ-DOMAIN 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00612.24^IQ^IQ calmodulin-binding motif^105-122^E:1e-05`PF13178.3^DUF4005^Protein of unknown function (DUF4005)^299-386^E:2.8e-10",".",".","ENOG4111DSA^IQ calmodulin-binding motif","KEGG:ath:AT2G43680",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47310_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.39786915684578,"0.0093080945104807","0.0126902440617622","TRINITY_DN47310_c0_g2_i1","RX24L_ARATH^RX24L_ARATH^Q:2-487,H:342-502^38.55%ID^E:1e-29^RecName: Full=Probable disease resistance protein RXW24L;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47310_c0_g2_i1.p1","2-502[+]","RX24L_ARATH^RX24L_ARATH^Q:1-162,H:342-502^38.55%ID^E:1e-29^RecName: Full=Probable disease resistance protein RXW24L;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^5-109^E:3.8e-22",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G58410","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46202_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",1.39196369697803,"0.000952776001275597","0.00141947036142164","TRINITY_DN46202_c4_g3_i3","R1A6_SOLDE^R1A6_SOLDE^Q:2033-4201,H:523-1242^34.13%ID^E:2e-83^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:5-2008,H:557-1242^32.72%ID^E:1e-80^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46202_c4_g3_i3.p1","452-4219[+]","R1A6_SOLDE^R1A6_SOLDE^Q:528-1250,H:523-1242^34.13%ID^E:1e-91^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:1-519,H:707-1242^32.06%ID^E:1e-55^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-103^E:3.8e-25`PF00931.19^NB-ARC^NB-ARC domain^535-816^E:2.2e-70",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47097_c2_g6","leaves S. abrotanoides","roots S. abrotanoides",1.390121926125,"0.00230760966400074","0.00333030860278972","TRINITY_DN47097_c2_g6_i2","PP104_ARATH^PP104_ARATH^Q:99-1739,H:4-551^50.09%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g64310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47097_c2_g6_i2.p1","96-1751[+]","PP104_ARATH^PP104_ARATH^Q:2-548,H:4-551^50.09%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g64310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^71-97^E:0.0095`PF01535.17^PPR^PPR repeat^143-163^E:0.089`PF13041.3^PPR_2^PPR repeat family^169-216^E:5.7e-08`PF01535.17^PPR^PPR repeat^172-202^E:4.6e-05`PF01535.17^PPR^PPR repeat^273-302^E:0.00019`PF01535.17^PPR^PPR repeat^346-373^E:0.0012`PF13812.3^PPR_3^Pentatricopeptide repeat domain^371-418^E:0.004`PF13041.3^PPR_2^PPR repeat family^372-420^E:4e-09`PF01535.17^PPR^PPR repeat^374-404^E:0.00085`PF01535.17^PPR^PPR repeat^410-436^E:0.38",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G64310","GO:0005739^cellular_component^mitochondrion`GO:1900864^biological_process^mitochondrial RNA modification",".",".","."]
["TRINITY_DN45691_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.38909631146361,"0.0120624074243008","0.0162631660511881","TRINITY_DN45691_c1_g1_i3","NT101_ARATH^NT101_ARATH^Q:3-413,H:592-728^78.1%ID^E:2e-68^RecName: Full=RNA cytidine acetyltransferase 1 {ECO:0000255|HAMAP-Rule:MF_03211};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45691_c1_g1_i3.p1","3-413[+]","NT101_ARATH^NT101_ARATH^Q:1-137,H:592-728^78.1%ID^E:2e-68^RecName: Full=RNA cytidine acetyltransferase 1 {ECO:0000255|HAMAP-Rule:MF_03211};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13718.3^GNAT_acetyltr_2^GNAT acetyltransferase 2^1-137^E:2.8e-45",".",".","COG1444^Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) (By similarity)","KEGG:ath:AT1G10490`KO:K14521","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0008080^molecular_function^N-acetyltransferase activity","GO:0008080^molecular_function^N-acetyltransferase activity",".","."]
["TRINITY_DN45502_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.37694192302505,"0.000361432078405351","0.000555703405353352","TRINITY_DN45502_c0_g1_i5","EFR_ARATH^EFR_ARATH^Q:373-35,H:772-900^50%ID^E:2e-27^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45502_c0_g1_i5.p1","2-373[-]","EFR_ARATH^EFR_ARATH^Q:1-113,H:772-900^50%ID^E:2e-27^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^4-113^E:1.7e-22`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^4-104^E:3.8e-18",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G20480`KO:K13428","GO:0012505^cellular_component^endomembrane system`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0019199^molecular_function^transmembrane receptor protein kinase activity`GO:0010204^biological_process^defense response signaling pathway, resistance gene-independent`GO:0016045^biological_process^detection of bacterium`GO:0002764^biological_process^immune response-regulating signaling pathway`GO:0009626^biological_process^plant-type hypersensitive response`GO:0010359^biological_process^regulation of anion channel activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43817_c6_g4","leaves S. abrotanoides","roots S. abrotanoides",1.3708297932709,"0.00552757300580856","0.00771308253251405","TRINITY_DN43817_c6_g4_i1","ZHD4_ARATH^ZHD4_ARATH^Q:352-951,H:88-280^45.5%ID^E:6e-39^RecName: Full=Zinc-finger homeodomain protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43817_c6_g4_i1.p1","205-972[+]","ZHD8_ARATH^ZHD8_ARATH^Q:1-248,H:1-240^44.7%ID^E:2e-60^RecName: Full=Zinc-finger homeodomain protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04770.9^ZF-HD_dimer^ZF-HD protein dimerisation region^50-103^E:9.9e-28",".",".","ENOG410YKTX^homeobox protein","KEGG:ath:AT5G15210","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46485_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.35400353186343,"0.000199283686283389","0.00031256000810459","TRINITY_DN46485_c0_g1_i1","P2B10_ARATH^P2B10_ARATH^Q:641-81,H:61-270^31.19%ID^E:2e-20^RecName: Full=F-box protein PP2-B10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46485_c0_g1_i1.p1","69-845[-]","P2B10_ARATH^P2B10_ARATH^Q:69-255,H:61-270^31.19%ID^E:5e-21^RecName: Full=F-box protein PP2-B10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14299.3^PP2^Phloem protein 2^98-253^E:4.5e-30",".",".","ENOG410YD6D^F-box protein","KEGG:ath:AT2G02360","GO:0030246^molecular_function^carbohydrate binding`GO:0016567^biological_process^protein ubiquitination",".",".","."]
["TRINITY_DN58769_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.34822252281754,"0.00111753033927998","0.0016544838495082","TRINITY_DN58769_c0_g1_i1","PP117_ARATH^PP117_ARATH^Q:454-2076,H:48-568^55.64%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g73400, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN58769_c0_g1_i1.p1","325-2082[+]","PP117_ARATH^PP117_ARATH^Q:44-584,H:48-568^55.64%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g73400, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^247-290^E:0.0012`PF13041.3^PPR_2^PPR repeat family^248-296^E:1e-07`PF01535.17^PPR^PPR repeat^253-278^E:0.011`PF13041.3^PPR_2^PPR repeat family^282-331^E:2e-08`PF01535.17^PPR^PPR repeat^286-314^E:0.0034`PF13812.3^PPR_3^Pentatricopeptide repeat domain^305-370^E:0.0018`PF12854.4^PPR_1^PPR repeat^313-343^E:1.3e-08`PF01535.17^PPR^PPR repeat^320-349^E:1.7e-05`PF13041.3^PPR_2^PPR repeat family^356-404^E:2e-10`PF01535.17^PPR^PPR repeat^359-388^E:0.00057`PF13812.3^PPR_3^Pentatricopeptide repeat domain^379-439^E:4.4e-07`PF12854.4^PPR_1^PPR repeat^387-418^E:7e-10`PF13041.3^PPR_2^PPR repeat family^390-438^E:2.4e-13`PF01535.17^PPR^PPR repeat^394-419^E:0.0023`PF13812.3^PPR_3^Pentatricopeptide repeat domain^415-472^E:4e-11`PF12854.4^PPR_1^PPR repeat^424-453^E:1.5e-05`PF13041.3^PPR_2^PPR repeat family^425-471^E:1.2e-14`PF01535.17^PPR^PPR repeat^428-458^E:4.9e-06`PF13041.3^PPR_2^PPR repeat family^460-507^E:1.2e-11`PF01535.17^PPR^PPR repeat^464-493^E:2.5e-05`PF01535.17^PPR^PPR repeat^499-527^E:0.19",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G73400","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN87123_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.34723837718708,"0.00129358027931388","0.0019056438986686","TRINITY_DN87123_c0_g1_i1","PP373_ARATH^PP373_ARATH^Q:3002-99,H:12-995^35.56%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP373_ARATH^PP373_ARATH^Q:2096-681,H:10-490^26.84%ID^E:3e-41^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87123_c0_g1_i1.p1","96-3185[-]","PP373_ARATH^PP373_ARATH^Q:62-1029,H:12-995^35.56%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP373_ARATH^PP373_ARATH^Q:364-835,H:10-490^26.84%ID^E:2e-42^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^90-116^E:0.00091`PF01535.17^PPR^PPR repeat^119-148^E:1.2e-05`PF01535.17^PPR^PPR repeat^192-219^E:0.92`PF13041.3^PPR_2^PPR repeat family^218-264^E:3.7e-07`PF01535.17^PPR^PPR repeat^220-250^E:0.00094`PF13812.3^PPR_3^Pentatricopeptide repeat domain^243-301^E:0.0015`PF01535.17^PPR^PPR repeat^321-347^E:0.00081`PF01535.17^PPR^PPR repeat^394-420^E:0.0051`PF01535.17^PPR^PPR repeat^422-451^E:0.0041`PF01535.17^PPR^PPR repeat^493-520^E:0.00036`PF13041.3^PPR_2^PPR repeat family^520-562^E:1.8e-08`PF01535.17^PPR^PPR repeat^521-550^E:6.6e-07`PF01535.17^PPR^PPR repeat^624-651^E:6.3e-06`PF01535.17^PPR^PPR repeat^725-753^E:1.3e-07`PF13041.3^PPR_2^PPR repeat family^725-769^E:9.1e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^726-768^E:0.0031`PF01535.17^PPR^PPR repeat^759-785^E:0.03`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^897-1018^E:6e-39",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G09950","GO:0009451^biological_process^RNA modification","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN44833_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",1.34315605274958,"0.0110562713635396","0.0149641102583929","TRINITY_DN44833_c2_g4_i5","CDPK9_ARATH^CDPK9_ARATH^Q:271-1671,H:74-541^79.74%ID^E:0^RecName: Full=Calcium-dependent protein kinase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44833_c2_g4_i5.p1","133-1674[+]","CDPK2_ORYSJ^CDPK2_ORYSJ^Q:1-509,H:1-528^72.57%ID^E:0^RecName: Full=Calcium-dependent protein kinase isoform 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00069.22^Pkinase^Protein kinase domain^64-322^E:6e-74`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^66-318^E:1.1e-30`PF13833.3^EF-hand_8^EF-hand domain pair^354-396^E:0.00083`PF00036.29^EF-hand_1^EF hand^370-396^E:1.1e-06`PF13499.3^EF-hand_7^EF-hand domain pair^370-431^E:1.9e-11`PF13405.3^EF-hand_6^EF-hand domain^370-397^E:4e-05`PF13202.3^EF-hand_5^EF hand^370-392^E:0.00028`PF13833.3^EF-hand_8^EF-hand domain pair^385-430^E:1.1e-07`PF13202.3^EF-hand_5^EF hand^408-429^E:0.023`PF13499.3^EF-hand_7^EF-hand domain pair^441-503^E:1.5e-13`PF13405.3^EF-hand_6^EF-hand domain^443-469^E:1.6e-06`PF00036.29^EF-hand_1^EF hand^444-468^E:1.5e-06`PF13202.3^EF-hand_5^EF hand^445-465^E:6e-06`PF13833.3^EF-hand_8^EF-hand domain pair^455-503^E:1.8e-09`PF00036.29^EF-hand_1^EF hand^478-504^E:1e-08`PF13202.3^EF-hand_5^EF hand^481-498^E:0.016",".",".","ENOG410XRMJ^calcium-dependent protein kinase","KEGG:osa:4343373`KO:K13412","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0009931^molecular_function^calcium-dependent protein serine/threonine kinase activity`GO:0005516^molecular_function^calmodulin binding`GO:0004683^molecular_function^calmodulin-dependent protein kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0035556^biological_process^intracellular signal transduction`GO:0018105^biological_process^peptidyl-serine phosphorylation`GO:0046777^biological_process^protein autophosphorylation","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation`GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN45553_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",1.34278173502731,"0.00460352624704184","0.0064695077866434","TRINITY_DN45553_c4_g3_i1","RLP2_ARATH^RLP2_ARATH^Q:254-655,H:255-388^46.27%ID^E:6e-63^RecName: Full=Receptor-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP2_ARATH^RLP2_ARATH^Q:652-1074,H:392-546^36.13%ID^E:6e-63^RecName: Full=Receptor-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP2_ARATH^RLP2_ARATH^Q:1095-1415,H:552-693^41.55%ID^E:6e-63^RecName: Full=Receptor-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP2_ARATH^RLP2_ARATH^Q:239-670,H:298-439^33.79%ID^E:2e-09^RecName: Full=Receptor-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP2_ARATH^RLP2_ARATH^Q:254-646,H:206-336^34.09%ID^E:2e-08^RecName: Full=Receptor-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45553_c4_g3_i1.p1","296-685[+]","PSYR1_ARATH^PSYR1_ARATH^Q:2-120,H:272-390^44.54%ID^E:1e-24^RecName: Full=Tyrosine-sulfated glycopeptide receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PSYR1_ARATH^PSYR1_ARATH^Q:54-115,H:97-158^41.94%ID^E:7e-06^RecName: Full=Tyrosine-sulfated glycopeptide receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^98-112^E:0.12`PF00560.30^LRR_1^Leucine Rich Repeat^99-117^E:0.055",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT1G72300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0001653^molecular_function^peptide receptor activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0004888^molecular_function^transmembrane signaling receptor activity`GO:0045851^biological_process^pH reduction`GO:0007165^biological_process^signal transduction`GO:0009826^biological_process^unidimensional cell growth","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44987_c3_g8","leaves S. abrotanoides","roots S. abrotanoides",1.33054714916115,"0.00597823146813999","0.00830974174071459","TRINITY_DN44987_c3_g8_i1","R1C3_SOLDE^R1C3_SOLDE^Q:106-1452,H:755-1199^26.49%ID^E:3e-20^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1C3_SOLDE^R1C3_SOLDE^Q:9-101,H:695-725^58.06%ID^E:3e-20^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44987_c3_g8_i1.p1","115-1554[+]","R1A6_SOLDE^R1A6_SOLDE^Q:2-451,H:775-1220^27.93%ID^E:3e-20^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN45894_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",1.33038321486527,"0.016480752315581","0.0218702418540128","TRINITY_DN45894_c3_g4_i1","PP256_ARATH^PP256_ARATH^Q:2071-71,H:32-700^55.37%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g26540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45894_c3_g4_i1.p1","35-2170[-]","PP256_ARATH^PP256_ARATH^Q:34-700,H:32-700^55.37%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g26540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^104-127^E:0.0075`PF01535.17^PPR^PPR repeat^131-160^E:9.2e-08`PF13041.3^PPR_2^PPR repeat family^131-174^E:2e-07`PF01535.17^PPR^PPR repeat^231-261^E:0.00061`PF01535.17^PPR^PPR repeat^303-324^E:0.049`PF12854.4^PPR_1^PPR repeat^327-357^E:8.2e-07`PF01535.17^PPR^PPR repeat^332-360^E:7.9e-08`PF01535.17^PPR^PPR repeat^363-391^E:0.00024`PF01535.17^PPR^PPR repeat^436-459^E:0.17`PF13041.3^PPR_2^PPR repeat family^463-510^E:8.3e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^463-510^E:0.003`PF01535.17^PPR^PPR repeat^465-491^E:1.7e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^564-611^E:0.0031`PF01535.17^PPR^PPR repeat^568-594^E:0.056`PF01535.17^PPR^PPR repeat^602-630^E:0.18",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G26540",".",".",".","."]
["TRINITY_DN42965_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",1.32654587820562,"0.00196868456080886","0.00285880518261807","TRINITY_DN42965_c2_g2_i3","AAP7_ARATH^AAP7_ARATH^Q:1770-1018,H:4-256^57.48%ID^E:2e-148^RecName: Full=Probable amino acid permease 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AAP7_ARATH^AAP7_ARATH^Q:911-285,H:256-466^62.09%ID^E:2e-148^RecName: Full=Probable amino acid permease 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42965_c2_g2_i3.p1","982-1806[-]","AAP7_ARATH^AAP7_ARATH^Q:18-263,H:9-256^58.23%ID^E:3e-98^RecName: Full=Probable amino acid permease 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01490.15^Aa_trans^Transmembrane amino acid transporter protein^35-263^E:5.3e-40`PF03222.10^Trp_Tyr_perm^Tryptophan/tyrosine permease family^38-209^E:3.3e-07",".",".","COG0814^amino acid transport","KEGG:ath:AT5G23810","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0015293^molecular_function^symporter activity`GO:0006865^biological_process^amino acid transport","GO:0003333^biological_process^amino acid transmembrane transport",".","."]
["TRINITY_DN46035_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",1.31367403895349,"0.00038154091623188","0.000585372865821244","TRINITY_DN46035_c2_g1_i2","WAK2_ARATH^WAK2_ARATH^Q:2521-488,H:26-692^45.53%ID^E:2e-167^RecName: Full=Wall-associated receptor kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46035_c2_g1_i2.p1","350-2668[-]","WAK2_ARATH^WAK2_ARATH^Q:50-727,H:26-692^45.53%ID^E:0^RecName: Full=Wall-associated receptor kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13947.3^GUB_WAK_bind^Wall-associated receptor kinase galacturonan-binding^51-156^E:2.7e-27`PF07645.12^EGF_CA^Calcium-binding EGF domain^315-347^E:1.3e-08`PF00008.24^EGF^EGF-like domain^319-349^E:8.4e-05`PF12947.4^EGF_3^EGF domain^322-351^E:3.9e-08`PF00069.22^Pkinase^Protein kinase domain^440-706^E:7.4e-51`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^443-710^E:2.4e-47","sigP:1^44^0.635^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G21270","GO:0005623^cellular_component^cell`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009992^biological_process^cellular water homeostasis`GO:0009311^biological_process^oligosaccharide metabolic process`GO:0009751^biological_process^response to salicylic acid`GO:0009826^biological_process^unidimensional cell growth","GO:0030247^molecular_function^polysaccharide binding`GO:0005509^molecular_function^calcium ion binding`GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN117436_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.31282688807123,"0.000126126298639743","0.00020059920053738","TRINITY_DN117436_c0_g1_i1","DIR23_ARATH^DIR23_ARATH^Q:690-211,H:27-187^45.34%ID^E:3e-39^RecName: Full=Dirigent protein 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN117436_c0_g1_i1.p1","196-786[-]","DIR23_ARATH^DIR23_ARATH^Q:33-192,H:27-187^45.34%ID^E:1e-48^RecName: Full=Dirigent protein 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^49-190^E:8.7e-48","sigP:1^18^0.838^YES",".","ENOG410YZUA^Disease resistance response protein","KEGG:ath:AT2G21100","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN43398_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.30994147353392,"0.000355810928316863","0.000547215425447945","TRINITY_DN43398_c0_g1_i1","AB12C_ARATH^AB12C_ARATH^Q:220-4221,H:1-1332^71.86%ID^E:0^RecName: Full=ABC transporter C family member 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB12C_ARATH^AB12C_ARATH^Q:1219-2736,H:949-1472^20.72%ID^E:4e-10^RecName: Full=ABC transporter C family member 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43398_c0_g1_i1.p1","220-4221[+]","AB12C_ARATH^AB12C_ARATH^Q:1-1334,H:1-1332^71.86%ID^E:0^RecName: Full=ABC transporter C family member 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB12C_ARATH^AB12C_ARATH^Q:334-839,H:949-1472^21.12%ID^E:2e-14^RecName: Full=ABC transporter C family member 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00664.20^ABC_membrane^ABC transporter transmembrane region^302-569^E:5.2e-38`PF00005.24^ABC_tran^ABC transporter^631-766^E:4.9e-17`PF00664.20^ABC_membrane^ABC transporter transmembrane region^917-1168^E:8.3e-27`PF00005.24^ABC_tran^ABC transporter^1254-1327^E:7.4e-14",".",".","COG1132^(ABC) transporter","KEGG:ath:AT1G30410","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0008559^molecular_function^xenobiotic-transporting ATPase activity","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN44721_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.30352813516247,"0.000216154135418235","0.000338341642286357","TRINITY_DN44721_c1_g1_i1","PP166_ARATH^PP166_ARATH^Q:1810-530,H:28-458^38.11%ID^E:1e-86^RecName: Full=Pentatricopeptide repeat-containing protein At2g20710, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44721_c1_g1_i1.p1","521-2071[-]","PP166_ARATH^PP166_ARATH^Q:88-514,H:28-458^38.11%ID^E:1e-97^RecName: Full=Pentatricopeptide repeat-containing protein At2g20710, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^197-224^E:0.014`PF01535.17^PPR^PPR repeat^232-260^E:0.00014`PF13812.3^PPR_3^Pentatricopeptide repeat domain^252-291^E:0.0034`PF01535.17^PPR^PPR repeat^265-291^E:0.15`PF01535.17^PPR^PPR repeat^410-434^E:0.0077`PF01535.17^PPR^PPR repeat^443-464^E:0.047",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G20710","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN44697_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.29712767603665,"0.00488814696826701","0.00685296582183368","TRINITY_DN44697_c1_g1_i1","PPR53_ARATH^PPR53_ARATH^Q:180-2207,H:51-760^36.15%ID^E:2e-162^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR53_ARATH^PPR53_ARATH^Q:432-1619,H:33-461^24.13%ID^E:1e-34^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44697_c1_g1_i1.p1","147-2210[+]","PPR53_ARATH^PPR53_ARATH^Q:12-687,H:51-760^36.15%ID^E:1e-165^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR53_ARATH^PPR53_ARATH^Q:96-491,H:33-461^24.13%ID^E:4e-35^RecName: Full=Pentatricopeptide repeat-containing protein At1g20230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^44-72^E:0.00023`PF01535.17^PPR^PPR repeat^145-175^E:0.034`PF13041.3^PPR_2^PPR repeat family^243-281^E:4.3e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^243-292^E:0.00089`PF01535.17^PPR^PPR repeat^247-276^E:7.9e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^268-325^E:3.1e-07`PF12854.4^PPR_1^PPR repeat^274-307^E:1.2e-05`PF13041.3^PPR_2^PPR repeat family^279-325^E:6.3e-12`PF01535.17^PPR^PPR repeat^281-311^E:5.3e-08`PF13041.3^PPR_2^PPR repeat family^380-427^E:1.1e-12`PF01535.17^PPR^PPR repeat^382-412^E:1.5e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^402-460^E:0.0027`PF01535.17^PPR^PPR repeat^417-444^E:0.0092`PF01535.17^PPR^PPR repeat^454-479^E:0.27`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^553-677^E:3.1e-36",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G20230",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN45250_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.29427430101937,"0.00022384383774166","0.000349798311298287","TRINITY_DN45250_c0_g2_i2","AB11B_ARATH^AB11B_ARATH^Q:3802-152,H:41-1277^64.86%ID^E:0^RecName: Full=ABC transporter B family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45250_c0_g2_i2.p1","146-3850[-]","AB11B_ARATH^AB11B_ARATH^Q:17-1233,H:41-1277^65.19%ID^E:0^RecName: Full=ABC transporter B family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00664.20^ABC_membrane^ABC transporter transmembrane region^34-308^E:1.2e-61`PF00005.24^ABC_tran^ABC transporter^377-524^E:2.2e-32`PF00664.20^ABC_membrane^ABC transporter transmembrane region^668-939^E:1.2e-50`PF00005.24^ABC_tran^ABC transporter^1010-1158^E:3e-34",".",".","COG1132^(ABC) transporter","KEGG:ath:AT1G02520`KO:K05658","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0010329^molecular_function^auxin efflux transmembrane transporter activity`GO:0010315^biological_process^auxin efflux`GO:0010540^biological_process^basipetal auxin transport","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN34678_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.29205126966717,"0.0126948614837344","0.017070486741755","TRINITY_DN34678_c0_g2_i1","PP276_ARATH^PP276_ARATH^Q:2277-166,H:16-731^48.68%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g49740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN34678_c0_g2_i1.p1","148-2295[-]","PP276_ARATH^PP276_ARATH^Q:7-714,H:16-735^48.68%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g49740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^116-145^E:6e-05`PF01535.17^PPR^PPR repeat^148-172^E:0.0019`PF13041.3^PPR_2^PPR repeat family^246-292^E:1.8e-09`PF01535.17^PPR^PPR repeat^248-277^E:0.00048`PF13041.3^PPR_2^PPR repeat family^343-388^E:3e-10`PF01535.17^PPR^PPR repeat^346-376^E:1e-05`PF01535.17^PPR^PPR repeat^416-443^E:0.0053`PF13041.3^PPR_2^PPR repeat family^442-485^E:6.4e-08`PF01535.17^PPR^PPR repeat^444-474^E:0.0047`PF01535.17^PPR^PPR repeat^513-538^E:0.045`PF01535.17^PPR^PPR repeat^542-567^E:0.00021`PF01535.17^PPR^PPR repeat^574-600^E:0.015`PF01535.17^PPR^PPR repeat^680-705^E:0.5",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G49740",".",".",".","."]
["TRINITY_DN87_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.28839996191905,"0.000104099289654341","0.000166513864630225","TRINITY_DN87_c0_g1_i1","PPR71_ARATH^PPR71_ARATH^Q:1835-111,H:2-581^55.65%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g34160;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87_c0_g1_i1.p1","108-1832[-]","PPR71_ARATH^PPR71_ARATH^Q:3-574,H:5-581^55.77%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g34160;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^69-94^E:0.82`PF13812.3^PPR_3^Pentatricopeptide repeat domain^130-167^E:0.0015`PF01535.17^PPR^PPR repeat^140-167^E:1e-05`PF13041.3^PPR_2^PPR repeat family^166-206^E:7e-09`PF01535.17^PPR^PPR repeat^169-196^E:2.1e-06`PF01535.17^PPR^PPR repeat^239-265^E:0.00012`PF13041.3^PPR_2^PPR repeat family^268-312^E:8.3e-08`PF01535.17^PPR^PPR repeat^270-297^E:3.2e-06`PF01535.17^PPR^PPR repeat^305-335^E:0.0036`PF01535.17^PPR^PPR repeat^342-365^E:0.049`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^441-564^E:1.3e-37",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G34160",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN40484_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.28150567858174,"0.000829701589972071","0.00124273704398891","TRINITY_DN40484_c0_g1_i2","ACA12_ARATH^ACA12_ARATH^Q:3-1172,H:237-625^68.21%ID^E:1e-156^RecName: Full=Calcium-transporting ATPase 12, plasma membrane-type;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40484_c0_g1_i2.p1","3-1250[+]","ACA13_ARATH^ACA13_ARATH^Q:1-388,H:232-618^66.5%ID^E:7e-160^RecName: Full=Putative calcium-transporting ATPase 13, plasma membrane-type;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00122.17^E1-E2_ATPase^E1-E2 ATPase^5-207^E:7.6e-43`PF13246.3^Cation_ATPase^Cation transport ATPase (P-type)^270-351^E:1.6e-13",".",".","ENOG410XNNC^ATPase, Ca transporting, plasma membrane","KEGG:ath:AT3G22910`KO:K01537","GO:0005887^cellular_component^integral component of plasma membrane`GO:0043231^cellular_component^intracellular membrane-bounded organelle`GO:0005524^molecular_function^ATP binding`GO:0005388^molecular_function^calcium-transporting ATPase activity`GO:0046872^molecular_function^metal ion binding","GO:0000166^molecular_function^nucleotide binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47663_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.27652779448269,"0.0298960695767124","0.0385189890000996","TRINITY_DN47663_c0_g1_i1","RCH1_ARATH^RCH1_ARATH^Q:10-603,H:289-489^44.55%ID^E:6e-25^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:10-447,H:481-629^40.27%ID^E:4e-19^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:1-597,H:310-511^40.89%ID^E:2e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:10-447,H:457-604^43.62%ID^E:5e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:10-597,H:409-607^41.5%ID^E:6e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:10-603,H:217-393^32%ID^E:3e-17^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:1-600,H:117-296^34.98%ID^E:6e-15^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:1-453,H:502-655^35.71%ID^E:2e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH1_ARATH^RCH1_ARATH^Q:88-600,H:98-272^34.66%ID^E:8e-11^RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47663_c0_g1_i1.p1","1-603[+]","RCH2_ARATH^RCH2_ARATH^Q:4-200,H:288-511^41.33%ID^E:5e-33^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:4-200,H:336-559^37.33%ID^E:4e-30^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:4-200,H:240-463^39.21%ID^E:1e-25^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:4-196,H:480-675^39.9%ID^E:4e-22^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:4-196,H:191-411^35.14%ID^E:1e-20^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:5-201,H:96-296^37.13%ID^E:2e-19^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:1-200,H:116-319^36.59%ID^E:3e-19^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:1-155,H:549-699^38.22%ID^E:5e-18^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^16-74^E:2e-08`PF13516.3^LRR_6^Leucine Rich repeat^37-52^E:0.24`PF00560.30^LRR_1^Leucine Rich Repeat^39-55^E:0.2`PF00560.30^LRR_1^Leucine Rich Repeat^63-84^E:1.1`PF13855.3^LRR_8^Leucine rich repeat^108-144^E:2.5e-06`PF13516.3^LRR_6^Leucine Rich repeat^108-121^E:0.014`PF00560.30^LRR_1^Leucine Rich Repeat^109-126^E:1.4`PF00560.30^LRR_1^Leucine Rich Repeat^133-149^E:0.23`PF13516.3^LRR_6^Leucine Rich repeat^133-145^E:0.88",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G24240","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0016032^biological_process^viral process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45927_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.27545834713182,"0.000287694196819815","0.000445634698015442","TRINITY_DN45927_c1_g1_i6","PUB33_ARATH^PUB33_ARATH^Q:811-383,H:48-193^26.97%ID^E:7e-09^RecName: Full=U-box domain-containing protein 33;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45927_c1_g1_i6.p1","224-946[-]","PUB33_ARATH^PUB33_ARATH^Q:45-188,H:47-193^25.5%ID^E:5e-10^RecName: Full=U-box domain-containing protein 33;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00582.23^Usp^Universal stress protein family^53-167^E:3.5e-05",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G45910","GO:0005524^molecular_function^ATP binding`GO:0016874^molecular_function^ligase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity","GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN42734_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.26925361348998,"0.000602394046387493","0.000911093961459747","TRINITY_DN42734_c0_g1_i3","Y5977_ARATH^Y5977_ARATH^Q:357-58,H:678-775^34.65%ID^E:8e-10^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42734_c0_g1_i3.p1","1-363[-]","Y5977_ARATH^Y5977_ARATH^Q:3-102,H:678-775^34.65%ID^E:7e-10^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^3-92^E:0.00011",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G49770","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43010_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.25907173342167,"0.0201972316936475","0.0265256976243238","TRINITY_DN43010_c0_g1_i1","INV1_DAUCA^INV1_DAUCA^Q:1892-225,H:35-592^69.46%ID^E:0^RecName: Full=Beta-fructofuranosidase, insoluble isoenzyme 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN43010_c0_g1_i1.p1","219-1985[-]","INV1_DAUCA^INV1_DAUCA^Q:17-587,H:20-592^68.35%ID^E:0^RecName: Full=Beta-fructofuranosidase, insoluble isoenzyme 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF00251.17^Glyco_hydro_32N^Glycosyl hydrolases family 32 N-terminal domain^61-379^E:6.9e-105`PF08244.9^Glyco_hydro_32C^Glycosyl hydrolases family 32 C terminal^456-540^E:3.7e-15",".",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0004575^molecular_function^sucrose alpha-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process",".",".","."]
["TRINITY_DN45739_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.24609858164404,"0.001428086567347","0.00209657379764437","TRINITY_DN45739_c0_g1_i1","PP227_ARATH^PP227_ARATH^Q:1946-525,H:151-628^61.09%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP227_ARATH^PP227_ARATH^Q:2280-1963,H:42-147^55.66%ID^E:3e-28^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP227_ARATH^PP227_ARATH^Q:1931-1350,H:55-248^29.38%ID^E:2e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP227_ARATH^PP227_ARATH^Q:1955-1671,H:249-343^32.63%ID^E:2e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP227_ARATH^PP227_ARATH^Q:2358-1981,H:110-242^31.34%ID^E:2e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP227_ARATH^PP227_ARATH^Q:2250-1936,H:254-357^32.38%ID^E:4e-08^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45739_c0_g1_i1.p1","522-1649[-]","PP227_ARATH^PP227_ARATH^Q:4-375,H:253-628^59.84%ID^E:7e-162^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP227_ARATH^PP227_ARATH^Q:8-292,H:55-363^23.88%ID^E:6e-14^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP227_ARATH^PP227_ARATH^Q:4-182,H:152-327^25.41%ID^E:3e-12^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^44-70^E:7.8e-05`PF13041.3^PPR_2^PPR repeat family^70-117^E:1.7e-08`PF01535.17^PPR^PPR repeat^72-100^E:1.9e-07`PF01535.17^PPR^PPR repeat^145-169^E:0.041`PF01535.17^PPR^PPR repeat^214-238^E:0.93`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^244-364^E:1.2e-33","sigP:1^20^0.578^YES",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G13770","GO:0005739^cellular_component^mitochondrion","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN45420_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.24408852956932,"0.00417607888053492","0.00589633742320758","TRINITY_DN45420_c0_g2_i2","JMJ30_ARATH^JMJ30_ARATH^Q:1441-413,H:1-368^57.88%ID^E:5e-129^RecName: Full=Putative lysine-specific demethylase JMJD5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45420_c0_g2_i2.p1","356-1441[-]","JMJ30_ARATH^JMJ30_ARATH^Q:1-343,H:1-368^60.43%ID^E:4e-151^RecName: Full=Putative lysine-specific demethylase JMJD5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13621.3^Cupin_8^Cupin-like domain^173-343^E:5.2e-30",".",".","ENOG410XQDR^Domain-Containing protein",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0051213^molecular_function^dioxygenase activity`GO:0046975^molecular_function^histone methyltransferase activity (H3-K36 specific)`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0007623^biological_process^circadian rhythm`GO:0070544^biological_process^histone H3-K36 demethylation`GO:0010452^biological_process^histone H3-K36 methylation`GO:0042752^biological_process^regulation of circadian rhythm`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN44402_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.24217279381977,"0.000458589698146369","0.000699702552200481","TRINITY_DN44402_c0_g1_i2","MORF7_ARATH^MORF7_ARATH^Q:1271-693,H:8-164^49.22%ID^E:5e-51^RecName: Full=Multiple organellar RNA editing factor 7, mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44402_c0_g1_i2.p1","852-1301[-]","MORF7_ARATH^MORF7_ARATH^Q:11-129,H:8-120^52.94%ID^E:1e-33^RecName: Full=Multiple organellar RNA editing factor 7, mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^17^0.484^YES",".","ENOG41117UH^NA",".","GO:0005739^cellular_component^mitochondrion`GO:0080156^biological_process^mitochondrial mRNA modification",".",".","."]
["TRINITY_DN47663_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",1.24132289233387,"0.000677851537181303","0.00102160870948515","TRINITY_DN47663_c0_g3_i1","Y1571_ARATH^Y1571_ARATH^Q:3-518,H:214-387^44.57%ID^E:2e-22^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:3-518,H:166-339^42.94%ID^E:3e-21^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:69-518,H:140-291^42.58%ID^E:3e-20^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:69-647,H:572-766^38.07%ID^E:2e-19^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:69-590,H:452-648^29.06%ID^E:7e-11^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:3-569,H:358-544^34.54%ID^E:2e-08^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:180-518,H:53-195^31.47%ID^E:3e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47663_c0_g3_i1.p1","3-881[+]","Y1571_ARATH^Y1571_ARATH^Q:1-172,H:214-387^44.57%ID^E:7e-27^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:1-172,H:166-339^42.94%ID^E:1e-25^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:1-172,H:118-291^41.24%ID^E:8e-24^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:1-173,H:574-747^37.71%ID^E:1e-21^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:11-215,H:560-766^37.32%ID^E:1e-20^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:11-172,H:79-243^37.5%ID^E:1e-16^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:1-189,H:358-544^34.54%ID^E:1e-12^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1571_ARATH^Y1571_ARATH^Q:60-172,H:53-195^31.47%ID^E:2e-06^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12799.4^LRR_4^Leucine Rich repeats (2 copies)^9-50^E:2.3e-06`PF13855.3^LRR_8^Leucine rich repeat^10-69^E:2.3e-06`PF00560.30^LRR_1^Leucine Rich Repeat^34-53^E:1.3`PF00560.30^LRR_1^Leucine Rich Repeat^127-143^E:1.6",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G35710","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN103189_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.24111485685513,"0.000181192861868133","0.000285018619975591","TRINITY_DN103189_c0_g1_i1","PP215_ARATH^PP215_ARATH^Q:161-1924,H:50-636^58.23%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g05340;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN103189_c0_g1_i1.p1","2-2011[+]","PP215_ARATH^PP215_ARATH^Q:54-641,H:50-636^58.23%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g05340;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^94-120^E:7e-08`PF13041.3^PPR_2^PPR repeat family^94-119^E:2.4e-07`PF12854.4^PPR_1^PPR repeat^94-119^E:8.3e-09`PF01535.17^PPR^PPR repeat^125-150^E:0.00033`PF13041.3^PPR_2^PPR repeat family^225-271^E:3.8e-07`PF01535.17^PPR^PPR repeat^227-252^E:0.079`PF01535.17^PPR^PPR repeat^300-320^E:0.013`PF01535.17^PPR^PPR repeat^328-357^E:0.00025`PF01535.17^PPR^PPR repeat^401-427^E:0.00041`PF13812.3^PPR_3^Pentatricopeptide repeat domain^425-473^E:1.5e-06`PF13041.3^PPR_2^PPR repeat family^426-474^E:1.1e-11`PF01535.17^PPR^PPR repeat^429-457^E:8.9e-08`PF01535.17^PPR^PPR repeat^464-492^E:0.019",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G05340",".",".",".","."]
["TRINITY_DN44780_c6_g1","leaves S. abrotanoides","roots S. abrotanoides",1.23927245870381,"0.0178432032410583","0.0235856552592151","TRINITY_DN44780_c6_g1_i2","PP219_ARATH^PP219_ARATH^Q:129-2120,H:14-685^54.76%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g08820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44780_c6_g1_i2.p1","96-2123[+]","PP219_ARATH^PP219_ARATH^Q:12-675,H:14-685^54.76%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g08820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^69-97^E:0.00048`PF01535.17^PPR^PPR repeat^142-167^E:0.043`PF13041.3^PPR_2^PPR repeat family^165-205^E:7.8e-08`PF01535.17^PPR^PPR repeat^168-197^E:0.0012`PF01535.17^PPR^PPR repeat^241-268^E:0.00029`PF01535.17^PPR^PPR repeat^269-298^E:5.2e-07`PF01535.17^PPR^PPR repeat^342-368^E:0.0018`PF01535.17^PPR^PPR repeat^370-399^E:0.015`PF01535.17^PPR^PPR repeat^442-467^E:0.081`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^542-664^E:4.2e-42",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G08820",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN44484_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",1.23413325508296,"0.00300782481041523","0.0043007292978748","TRINITY_DN44484_c3_g1_i1","WTR11_ARATH^WTR11_ARATH^Q:117-749,H:4-212^49.53%ID^E:2e-86^RecName: Full=WAT1-related protein At1g70260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WTR11_ARATH^WTR11_ARATH^Q:745-1161,H:229-375^44.9%ID^E:2e-86^RecName: Full=WAT1-related protein At1g70260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44484_c3_g1_i1.p1","90-806[+]","WTR11_ARATH^WTR11_ARATH^Q:10-220,H:4-212^49.53%ID^E:5e-62^RecName: Full=WAT1-related protein At1g70260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00892.17^EamA^EamA-like transporter family^22-160^E:1.6e-13",".",".","ENOG41117F8^Nodulin MtN21 family protein","KEGG:ath:AT1G70260","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44287_c3_g7","leaves S. abrotanoides","roots S. abrotanoides",1.23004662476414,"0.000201468546326185","0.00031589631264601","TRINITY_DN44287_c3_g7_i1","D6KL2_ARATH^D6KL2_ARATH^Q:335-1408,H:196-546^53.93%ID^E:5e-126^RecName: Full=Serine/threonine-protein kinase D6PKL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44287_c3_g7_i1.p1","2-1468[+]","D6KL2_ARATH^D6KL2_ARATH^Q:80-469,H:164-546^52.35%ID^E:4e-135^RecName: Full=Serine/threonine-protein kinase D6PKL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^108-272^E:3.4e-17`PF00069.22^Pkinase^Protein kinase domain^145-275^E:3.1e-29`PF00069.22^Pkinase^Protein kinase domain^347-450^E:3.9e-19`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^354-434^E:1.5e-05",".",".","ENOG410XQ0C^serine threonine-protein kinase","KEGG:ath:AT5G47750`KO:K08286","GO:0005737^cellular_component^cytoplasm`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0010540^biological_process^basipetal auxin transport`GO:0035556^biological_process^intracellular signal transduction`GO:0006468^biological_process^protein phosphorylation","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN45454_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",1.22713215738696,"0.000373403722799773","0.000573466861549421","TRINITY_DN45454_c3_g2_i3","PP417_ARATH^PP417_ARATH^Q:2229-364,H:38-657^55.61%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g44230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45454_c3_g2_i3.p1","361-2331[-]","PP417_ARATH^PP417_ARATH^Q:35-656,H:38-657^55.61%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g44230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^112-140^E:0.0055`PF01535.17^PPR^PPR repeat^183-211^E:0.00026`PF12854.4^PPR_1^PPR repeat^210-238^E:7.2e-06`PF01535.17^PPR^PPR repeat^213-241^E:6.8e-06`PF13041.3^PPR_2^PPR repeat family^241-289^E:3.5e-09`PF01535.17^PPR^PPR repeat^244-274^E:2.4e-06`PF01535.17^PPR^PPR repeat^319-346^E:9e-05`PF13041.3^PPR_2^PPR repeat family^344-391^E:4.2e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^344-391^E:2.1e-05`PF12854.4^PPR_1^PPR repeat^345-373^E:6e-06`PF01535.17^PPR^PPR repeat^347-374^E:3.7e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^368-429^E:0.00033`PF01535.17^PPR^PPR repeat^420-443^E:0.25`PF01535.17^PPR^PPR repeat^491-514^E:0.62`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^520-646^E:8.9e-40",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G44230",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN45233_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.20162750936349,{"v":956124387.82098,"d":"9.56E+08"},"0.000153323694727699","TRINITY_DN45233_c0_g1_i6","RPP1_ARATH^RPP1_ARATH^Q:71-367,H:738-828^36.36%ID^E:3e-06^RecName: Full=Probable disease resistance protein RPP1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45233_c0_g1_i6.p1","2-382[+]","RPP1_ARATH^RPP1_ARATH^Q:24-122,H:738-828^35.35%ID^E:1e-06^RecName: Full=Probable disease resistance protein RPP1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G44480","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0000139^cellular_component^Golgi membrane`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0030275^molecular_function^LRR domain binding`GO:0006952^biological_process^defense response`GO:0009817^biological_process^defense response to fungus, incompatible interaction`GO:0002239^biological_process^response to oomycetes`GO:0007165^biological_process^signal transduction",".",".","."]
["TRINITY_DN37482_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.1972774586084,"0.0244214289184934","0.0318004654560419","TRINITY_DN37482_c0_g2_i1","PP224_ARATH^PP224_ARATH^Q:2117-357,H:27-602^34.85%ID^E:1e-111^RecName: Full=Pentatricopeptide repeat-containing protein At3g12770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37482_c0_g2_i1.p1","351-2267[-]","PP224_ARATH^PP224_ARATH^Q:51-637,H:27-602^34.85%ID^E:2e-113^RecName: Full=Pentatricopeptide repeat-containing protein At3g12770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^102-150^E:1.7e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^102-149^E:0.00023`PF01535.17^PPR^PPR repeat^107-134^E:0.43`PF01535.17^PPR^PPR repeat^210-238^E:1.6e-06`PF01535.17^PPR^PPR repeat^319-346^E:3.6e-06`PF01535.17^PPR^PPR repeat^396-422^E:2.4e-05`PF13041.3^PPR_2^PPR repeat family^421-467^E:7.8e-10`PF01535.17^PPR^PPR repeat^424-452^E:3.4e-07`PF01535.17^PPR^PPR repeat^464-487^E:0.27",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G12770",".",".",".","."]
["TRINITY_DN45644_c4_g5","leaves S. abrotanoides","roots S. abrotanoides",1.19492702300853,"0.00259109459463401","0.00372333875340382","TRINITY_DN45644_c4_g5_i1","PP223_ARATH^PP223_ARATH^Q:120-1898,H:21-623^59.44%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g11460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45644_c4_g5_i1.p1","3-1901[+]","PP223_ARATH^PP223_ARATH^Q:29-632,H:11-623^59.19%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g11460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^44-67^E:0.27`PF01535.17^PPR^PPR repeat^111-133^E:0.34`PF01535.17^PPR^PPR repeat^141-170^E:0.0054`PF01535.17^PPR^PPR repeat^214-239^E:0.027`PF13041.3^PPR_2^PPR repeat family^241-287^E:1.8e-08`PF01535.17^PPR^PPR repeat^242-269^E:6.3e-08`PF01535.17^PPR^PPR repeat^315-339^E:0.56`PF13041.3^PPR_2^PPR repeat family^341-387^E:1.2e-08`PF01535.17^PPR^PPR repeat^343-373^E:1.8e-07`PF01535.17^PPR^PPR repeat^381-405^E:0.73`PF01535.17^PPR^PPR repeat^414-440^E:0.018`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^562-621^E:1.5e-18",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G11460","GO:0016554^biological_process^cytidine to uridine editing","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN41643_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.19377640354745,"0.000545230946798318","0.000827700355703423","TRINITY_DN41643_c0_g1_i3","TWIH_ARATH^TWIH_ARATH^Q:345-1343,H:77-413^50.73%ID^E:1e-85^RecName: Full=Twinkle homolog protein, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41643_c0_g1_i3.p1","624-1349[+]","PRIH_ARATH^PRIH_ARATH^Q:25-238,H:122-336^63.26%ID^E:4e-89^RecName: Full=Primase homolog protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13662.3^Toprim_4^Toprim domain^107-199^E:1.9e-18`PF01751.19^Toprim^Toprim domain^108-191^E:4.4e-07`PF13155.3^Toprim_2^Toprim-like^110-217^E:2.1e-09",".",".",".","KEGG:ath:AT1G30660","GO:0043139^molecular_function^5'-3' DNA helicase activity`GO:0046872^molecular_function^metal ion binding`GO:0016779^molecular_function^nucleotidyltransferase activity`GO:0003697^molecular_function^single-stranded DNA binding",".",".","."]
["TRINITY_DN46114_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",1.18691105650569,"0.0276525067533308","0.0357696911723019","TRINITY_DN46114_c1_g5_i1","PP394_ARATH^PP394_ARATH^Q:1298-6,H:60-490^50.93%ID^E:1e-147^RecName: Full=Pentatricopeptide repeat-containing protein At5g19020, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP394_ARATH^PP394_ARATH^Q:1295-3,H:193-596^26.73%ID^E:2e-44^RecName: Full=Pentatricopeptide repeat-containing protein At5g19020, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP394_ARATH^PP394_ARATH^Q:563-102,H:40-193^32.47%ID^E:3e-17^RecName: Full=Pentatricopeptide repeat-containing protein At5g19020, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46114_c1_g5_i1.p1","3-1415[-]","PP394_ARATH^PP394_ARATH^Q:20-470,H:41-490^50.66%ID^E:6e-152^RecName: Full=Pentatricopeptide repeat-containing protein At5g19020, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP394_ARATH^PP394_ARATH^Q:41-471,H:193-596^26.73%ID^E:2e-44^RecName: Full=Pentatricopeptide repeat-containing protein At5g19020, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP394_ARATH^PP394_ARATH^Q:38-277,H:322-604^28.62%ID^E:1e-16^RecName: Full=Pentatricopeptide repeat-containing protein At5g19020, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^60-83^E:0.028`PF01535.17^PPR^PPR repeat^88-118^E:2.6e-06`PF13041.3^PPR_2^PPR repeat family^116-165^E:8e-09`PF12854.4^PPR_1^PPR repeat^117-145^E:6.7e-06`PF01535.17^PPR^PPR repeat^119-149^E:3.7e-07`PF01535.17^PPR^PPR repeat^221-250^E:9.9e-06`PF13041.3^PPR_2^PPR repeat family^249-287^E:9.1e-09`PF12854.4^PPR_1^PPR repeat^250-278^E:1.4e-05`PF01535.17^PPR^PPR repeat^252-279^E:2.9e-06`PF01535.17^PPR^PPR repeat^354-382^E:0.00021`PF13812.3^PPR_3^Pentatricopeptide repeat domain^381-428^E:0.0011`PF13041.3^PPR_2^PPR repeat family^382-427^E:6.2e-12`PF01535.17^PPR^PPR repeat^384-414^E:5.6e-09",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G19020","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN46320_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",1.18555039583116,"0.000249438723508136","0.000388487121250329","TRINITY_DN46320_c2_g4_i1","FB52_ARATH^FB52_ARATH^Q:1218-400,H:32-313^23.88%ID^E:2e-16^RecName: Full=Putative F-box protein At1g50870;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46320_c2_g4_i1.p1","160-1245[-]","CPR30_ARATH^CPR30_ARATH^Q:8-308,H:3-329^26.96%ID^E:3e-18^RecName: Full=F-box protein CPR30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^6-44^E:2.3e-06`PF08268.9^FBA_3^F-box associated domain^192-284^E:2.5e-07`PF07734.10^FBA_1^F-box associated^194-285^E:2.1e-07",".",".","ENOG4111BET^NA","KEGG:ath:AT4G12560","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0031348^biological_process^negative regulation of defense response`GO:0042177^biological_process^negative regulation of protein catabolic process`GO:0009626^biological_process^plant-type hypersensitive response`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44229_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.18514908952656,"0.00066797141622454","0.00100710611664335","TRINITY_DN44229_c1_g1_i1","ARIA_ARATH^ARIA_ARATH^Q:267-2252,H:40-700^76.74%ID^E:0^RecName: Full=ARM REPEAT PROTEIN INTERACTING WITH ABF2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44229_c1_g1_i1.p1","138-2276[+]","ARIA_ARATH^ARIA_ARATH^Q:6-705,H:3-700^73.58%ID^E:0^RecName: Full=ARM REPEAT PROTEIN INTERACTING WITH ABF2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00514.20^Arm^Armadillo/beta-catenin-like repeat^143-189^E:9.7e-05`PF00514.20^Arm^Armadillo/beta-catenin-like repeat^199-231^E:1.6e-07`PF00514.20^Arm^Armadillo/beta-catenin-like repeat^234-273^E:1.8e-07`PF00651.28^BTB^BTB/POZ domain^540-641^E:2.6e-25",".",".","ENOG410XRTN^U-box domain-containing protein",".","GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0010187^biological_process^negative regulation of seed germination`GO:0016567^biological_process^protein ubiquitination`GO:0009737^biological_process^response to abscisic acid`GO:0009651^biological_process^response to salt stress","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45878_c4_g5","leaves S. abrotanoides","roots S. abrotanoides",1.18323588795701,"0.000171279655397462","0.0002699367369064","TRINITY_DN45878_c4_g5_i3","PPR27_ARATH^PPR27_ARATH^Q:47-1849,H:15-606^45.85%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g09820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45878_c4_g5_i3.p1","2-1852[+]","PPR27_ARATH^PPR27_ARATH^Q:16-616,H:15-606^45.85%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g09820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^200-245^E:5.8e-08`PF01535.17^PPR^PPR repeat^200-229^E:0.032`PF13812.3^PPR_3^Pentatricopeptide repeat domain^222-280^E:1.1e-12`PF12854.4^PPR_1^PPR repeat^229-260^E:9.1e-11`PF13041.3^PPR_2^PPR repeat family^232-280^E:9.3e-18`PF01535.17^PPR^PPR repeat^234-264^E:1.2e-06`PF12854.4^PPR_1^PPR repeat^262-282^E:1.3e-09`PF13041.3^PPR_2^PPR repeat family^266-318^E:2.8e-19`PF01535.17^PPR^PPR repeat^269-302^E:3.3e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^292-315^E:0.00057`PF12854.4^PPR_1^PPR repeat^300-333^E:6.9e-11`PF13041.3^PPR_2^PPR repeat family^304-352^E:8.1e-17`PF01535.17^PPR^PPR repeat^307-337^E:3.5e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^327-386^E:1.1e-09`PF12854.4^PPR_1^PPR repeat^335-368^E:8.9e-13`PF13041.3^PPR_2^PPR repeat family^339-388^E:2.2e-15`PF01535.17^PPR^PPR repeat^342-371^E:8.3e-09`PF12854.4^PPR_1^PPR repeat^371-400^E:1.2e-07`PF01535.17^PPR^PPR repeat^377-407^E:0.00012`PF13041.3^PPR_2^PPR repeat family^382-423^E:9.7e-09`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^384-530^E:5.4e-14`PF13812.3^PPR_3^Pentatricopeptide repeat domain^398-456^E:7.2e-14`PF12854.4^PPR_1^PPR repeat^406-437^E:6.1e-12`PF13041.3^PPR_2^PPR repeat family^410-453^E:1e-14`PF01535.17^PPR^PPR repeat^413-440^E:1.1e-08`PF12854.4^PPR_1^PPR repeat^442-473^E:1.7e-08`PF13041.3^PPR_2^PPR repeat family^444-493^E:9.5e-18`PF01535.17^PPR^PPR repeat^447-477^E:1e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^452-491^E:9e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^467-524^E:2.3e-11`PF12854.4^PPR_1^PPR repeat^475-508^E:8.4e-10`PF13041.3^PPR_2^PPR repeat family^480-522^E:2e-13`PF01535.17^PPR^PPR repeat^482-512^E:6e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^502-561^E:3.3e-17`PF12854.4^PPR_1^PPR repeat^510-543^E:5.7e-10`PF13041.3^PPR_2^PPR repeat family^514-561^E:2.5e-15`PF01535.17^PPR^PPR repeat^517-546^E:6.4e-07`PF12854.4^PPR_1^PPR repeat^546-577^E:2.7e-08`PF13041.3^PPR_2^PPR repeat family^549-590^E:2.3e-12`PF01535.17^PPR^PPR repeat^552-582^E:2.7e-07",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G09820",".",".",".","."]
["TRINITY_DN46760_c0_g5","leaves S. abrotanoides","roots S. abrotanoides",1.18294954908208,"0.00258280014444091","0.0037125887850512","TRINITY_DN46760_c0_g5_i1","R1A6_SOLDE^R1A6_SOLDE^Q:40-432,H:614-746^39.26%ID^E:5e-16^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46760_c0_g5_i1.p1","1-432[+]","R1A6_SOLDE^R1A6_SOLDE^Q:14-144,H:614-746^39.26%ID^E:5e-16^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^10-143^E:2.4e-25",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN17621_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.17470428405733,"0.000209723983085848","0.000328520784213706","TRINITY_DN17621_c0_g2_i1","MAPT_ARATH^MAPT_ARATH^Q:1750-1457,H:37-134^36.73%ID^E:2e-13^RecName: Full=Microtubule-associated protein TORTIFOLIA1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MAPT_ARATH^MAPT_ARATH^Q:586-383,H:508-575^44.12%ID^E:1e-09^RecName: Full=Microtubule-associated protein TORTIFOLIA1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MAPT_ARATH^MAPT_ARATH^Q:1219-920,H:228-326^37%ID^E:6e-06^RecName: Full=Microtubule-associated protein TORTIFOLIA1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN17621_c0_g2_i1.p1","221-1765[-]","SP2L_ARATH^SP2L_ARATH^Q:10-284,H:36-325^35.27%ID^E:4e-44^RecName: Full=Microtubule-associated protein SPIRAL2-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SP2L_ARATH^SP2L_ARATH^Q:396-450,H:503-557^41.82%ID^E:2e-07^RecName: Full=Microtubule-associated protein SPIRAL2-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12765.4^Cohesin_HEAT^HEAT repeat associated with sister chromatid cohesion^89-114^E:0.00015",".",".","ENOG410ZR3M^Microtubule-associated protein","KEGG:ath:AT1G50890","GO:0005737^cellular_component^cytoplasm`GO:0005874^cellular_component^microtubule",".",".","."]
["TRINITY_DN45252_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",1.17201838346064,"0.0065262285731437","0.00903842388318804","TRINITY_DN45252_c1_g5_i3","DTX24_ARATH^DTX24_ARATH^Q:182-1564,H:30-490^50.76%ID^E:2e-167^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45252_c1_g5_i3.p1","119-1546[+]","DTX24_ARATH^DTX24_ARATH^Q:22-475,H:30-483^51.32%ID^E:6e-168^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^39-198^E:9e-22`PF01554.15^MatE^MatE^262-421^E:8.7e-21",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT3G03620`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN43430_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.15700331610991,"0.0120754020634064","0.0162794663850641","TRINITY_DN43430_c0_g1_i5","PPR50_ARATH^PPR50_ARATH^Q:49-2526,H:31-856^49.94%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:910-2592,H:146-664^25.09%ID^E:8e-49^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:436-2004,H:299-857^25.27%ID^E:1e-46^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:1285-2631,H:158-572^24.22%ID^E:2e-35^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:436-1488,H:439-860^24.76%ID^E:5e-29^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:1858-2646,H:209-472^29.37%ID^E:3e-27^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:1522-2646,H:202-507^23.47%ID^E:1e-24^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43430_c0_g1_i5.p1","76-2700[+]","PPR50_ARATH^PPR50_ARATH^Q:4-817,H:45-856^50.18%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:279-839,H:146-664^25.09%ID^E:1e-49^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:121-643,H:299-857^25.09%ID^E:3e-47^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:404-852,H:158-572^24.22%ID^E:8e-36^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:121-471,H:439-860^24.76%ID^E:2e-29^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:595-857,H:209-472^29.37%ID^E:1e-27^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR50_ARATH^PPR50_ARATH^Q:483-857,H:202-507^23.47%ID^E:6e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g19290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12854.4^PPR_1^PPR repeat^183-211^E:2e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^215-266^E:2.1e-09`PF13041.3^PPR_2^PPR repeat family^222-270^E:1.6e-11`PF01535.17^PPR^PPR repeat^226-254^E:0.0028`PF13812.3^PPR_3^Pentatricopeptide repeat domain^251-287^E:8.1e-07`PF12854.4^PPR_1^PPR repeat^253-285^E:1.1e-10`PF13041.3^PPR_2^PPR repeat family^256-287^E:1.2e-08`PF01535.17^PPR^PPR repeat^259-287^E:8.1e-09`PF12854.4^PPR_1^PPR repeat^295-322^E:1.6e-09`PF01535.17^PPR^PPR repeat^298-327^E:4.8e-07`PF12854.4^PPR_1^PPR repeat^326-357^E:1.7e-07`PF13041.3^PPR_2^PPR repeat family^330-378^E:1.8e-14`PF01535.17^PPR^PPR repeat^333-361^E:8.1e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^353-409^E:3.5e-09`PF12854.4^PPR_1^PPR repeat^361-393^E:1.4e-11`PF01535.17^PPR^PPR repeat^367-397^E:3.6e-09`PF13041.3^PPR_2^PPR repeat family^368-413^E:8e-16`PF12854.4^PPR_1^PPR repeat^395-427^E:5e-08`PF13041.3^PPR_2^PPR repeat family^399-447^E:2e-12`PF01535.17^PPR^PPR repeat^402-432^E:5.7e-07`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^414-588^E:1.7e-06`PF01535.17^PPR^PPR repeat^439-466^E:1.4`PF12854.4^PPR_1^PPR repeat^466-497^E:2e-05`PF13041.3^PPR_2^PPR repeat family^470-518^E:3.5e-12`PF01535.17^PPR^PPR repeat^474-502^E:1.6e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^493-548^E:0.00022`PF12854.4^PPR_1^PPR repeat^500-532^E:6.9e-09`PF01535.17^PPR^PPR repeat^511-537^E:0.002`PF13812.3^PPR_3^Pentatricopeptide repeat domain^528-584^E:3.1e-10`PF01535.17^PPR^PPR repeat^543-566^E:0.26`PF13812.3^PPR_3^Pentatricopeptide repeat domain^563-619^E:2.2e-08`PF12854.4^PPR_1^PPR repeat^572-602^E:2.3e-06`PF13041.3^PPR_2^PPR repeat family^574-621^E:7.9e-11`PF01535.17^PPR^PPR repeat^577-607^E:2.1e-05`PF12854.4^PPR_1^PPR repeat^605-638^E:5.6e-06`PF01535.17^PPR^PPR repeat^613-640^E:0.014`PF12854.4^PPR_1^PPR repeat^677-704^E:3.8e-07`PF13041.3^PPR_2^PPR repeat family^679-725^E:4.4e-13`PF01535.17^PPR^PPR repeat^683-712^E:6.6e-05`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^696-800^E:2e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^705-759^E:4.3e-08`PF12854.4^PPR_1^PPR repeat^710-742^E:7.2e-06`PF01535.17^PPR^PPR repeat^717-747^E:0.00055`PF13812.3^PPR_3^Pentatricopeptide repeat domain^738-798^E:3.9e-13`PF12854.4^PPR_1^PPR repeat^745-776^E:3e-12`PF13041.3^PPR_2^PPR repeat family^749-798^E:6.1e-19`PF01535.17^PPR^PPR repeat^752-781^E:2e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^772-825^E:9.6e-08`PF12854.4^PPR_1^PPR repeat^780-812^E:1.2e-11`PF13041.3^PPR_2^PPR repeat family^784-828^E:1.9e-12`PF01535.17^PPR^PPR repeat^787-817^E:1e-08",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G19290`KO:K17964",".",".",".","."]
["TRINITY_DN36804_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.14613391795099,"0.0338714178227562","0.0433695424221702","TRINITY_DN36804_c0_g1_i2","PP207_ARATH^PP207_ARATH^Q:2746-287,H:41-881^60.69%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:2749-899,H:172-779^29.49%ID^E:1e-74^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:1534-722,H:11-313^24.67%ID^E:2e-21^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36804_c0_g1_i2.p1","242-2851[-]","PP207_ARATH^PP207_ARATH^Q:36-855,H:41-881^60.69%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:35-651,H:172-779^29.49%ID^E:2e-78^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:264-776,H:36-597^26.46%ID^E:1e-61^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:440-710,H:11-313^24.67%ID^E:1e-21^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^82-109^E:0.045`PF01535.17^PPR^PPR repeat^110-139^E:1e-05`PF01535.17^PPR^PPR repeat^141-168^E:0.00037`PF01535.17^PPR^PPR repeat^214-238^E:0.057`PF01535.17^PPR^PPR repeat^242-272^E:2.2e-06`PF01535.17^PPR^PPR repeat^315-336^E:0.27`PF01535.17^PPR^PPR repeat^344-372^E:1`PF01535.17^PPR^PPR repeat^416-441^E:0.0012`PF01535.17^PPR^PPR repeat^517-541^E:1.4e-05`PF13041.3^PPR_2^PPR repeat family^542-589^E:3.6e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^543-589^E:0.00096`PF01535.17^PPR^PPR repeat^544-574^E:2.3e-05`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^585-737^E:2.9e-07`PF13041.3^PPR_2^PPR repeat family^643-690^E:7.7e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^643-689^E:0.00054`PF01535.17^PPR^PPR repeat^645-672^E:3.2e-06`PF01535.17^PPR^PPR repeat^681-707^E:0.044`PF01535.17^PPR^PPR repeat^717-741^E:0.00066`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^816-856^E:5e-07",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G02330",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN47173_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",1.14295292819602,"0.00293168000353667","0.00419535895149436","TRINITY_DN47173_c0_g4_i1","PPR20_ARATH^PPR20_ARATH^Q:216-1583,H:2-458^53.26%ID^E:6e-163^RecName: Full=Pentatricopeptide repeat-containing protein At1g07740, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47173_c0_g4_i1.p1","204-1592[+]","PPR20_ARATH^PPR20_ARATH^Q:5-460,H:2-458^53.26%ID^E:5e-165^RecName: Full=Pentatricopeptide repeat-containing protein At1g07740, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^124-146^E:0.089`PF13041.3^PPR_2^PPR repeat family^154-197^E:3.4e-07`PF01535.17^PPR^PPR repeat^156-184^E:0.016`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^168-308^E:7.8e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^178-234^E:5.7e-09`PF13041.3^PPR_2^PPR repeat family^188-231^E:9.5e-13`PF01535.17^PPR^PPR repeat^190-219^E:8.1e-05`PF12854.4^PPR_1^PPR repeat^219-249^E:7.2e-08`PF13041.3^PPR_2^PPR repeat family^222-271^E:2.4e-12`PF01535.17^PPR^PPR repeat^225-254^E:0.00045`PF13041.3^PPR_2^PPR repeat family^258-306^E:2.1e-07`PF01535.17^PPR^PPR repeat^260-290^E:0.00066`PF13812.3^PPR_3^Pentatricopeptide repeat domain^281-339^E:1.3e-06`PF13041.3^PPR_2^PPR repeat family^295-336^E:4.3e-10`PF01535.17^PPR^PPR repeat^297-325^E:0.00025`PF12854.4^PPR_1^PPR repeat^324-356^E:1.4e-09`PF13041.3^PPR_2^PPR repeat family^327-375^E:7.3e-14`PF01535.17^PPR^PPR repeat^330-360^E:3.7e-05`PF01535.17^PPR^PPR repeat^403-429^E:0.23",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G07740","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN44987_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",1.13999562104614,"0.01643957444139","0.0218177127382632","TRINITY_DN44987_c4_g3_i1","R1A6_SOLDE^R1A6_SOLDE^Q:3-1319,H:777-1218^27.29%ID^E:2e-24^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44987_c4_g3_i1.p2","3-368[+]","R1C3_SOLDE^R1C3_SOLDE^Q:1-98,H:761-858^36.73%ID^E:1e-14^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN35634_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.13789964178188,"0.0150095582450386","0.020015911825455","TRINITY_DN35634_c0_g1_i1","PP449_ARATH^PP449_ARATH^Q:1774-221,H:23-530^39.16%ID^E:4e-122^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP449_ARATH^PP449_ARATH^Q:1819-848,H:109-429^23.96%ID^E:3e-20^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35634_c0_g1_i1.p1","191-1846[-]","PP449_ARATH^PP449_ARATH^Q:25-542,H:23-530^39.16%ID^E:1e-123^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP449_ARATH^PP449_ARATH^Q:10-333,H:109-429^23.96%ID^E:2e-20^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^77-127^E:5.2e-09`PF01535.17^PPR^PPR repeat^82-108^E:0.0011`PF01535.17^PPR^PPR repeat^117-146^E:0.033`PF01535.17^PPR^PPR repeat^185-215^E:3.2e-05`PF13041.3^PPR_2^PPR repeat family^214-261^E:9.3e-11`PF12854.4^PPR_1^PPR repeat^214-242^E:4e-06`PF01535.17^PPR^PPR repeat^216-245^E:5.9e-08`PF01535.17^PPR^PPR repeat^293-318^E:0.0038`PF13041.3^PPR_2^PPR repeat family^320-368^E:1e-07`PF01535.17^PPR^PPR repeat^321-344^E:1.3e-05`PF01535.17^PPR^PPR repeat^360-387^E:0.55`PF01535.17^PPR^PPR repeat^397-421^E:0.037",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G66520","GO:0009507^cellular_component^chloroplast`GO:1900865^biological_process^chloroplast RNA modification`GO:0016554^biological_process^cytidine to uridine editing",".",".","."]
["TRINITY_DN45650_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.13592425385853,"0.00210076577175798","0.00304350400127236","TRINITY_DN45650_c1_g1_i1","PP198_ARATH^PP198_ARATH^Q:2104-209,H:19-650^56.71%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g41080;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45650_c1_g1_i1.p1","206-2272[-]","PP198_ARATH^PP198_ARATH^Q:44-688,H:5-650^55.95%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g41080;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^121-148^E:0.00013`PF01535.17^PPR^PPR repeat^150-178^E:0.00052`PF13041.3^PPR_2^PPR repeat family^178-225^E:8.9e-10`PF01535.17^PPR^PPR repeat^181-210^E:0.0033`PF13041.3^PPR_2^PPR repeat family^279-325^E:1.4e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^279-325^E:0.0039`PF01535.17^PPR^PPR repeat^281-311^E:0.0019`PF01535.17^PPR^PPR repeat^354-375^E:0.029`PF01535.17^PPR^PPR repeat^385-412^E:4.9e-07`PF01535.17^PPR^PPR repeat^418-446^E:0.31`PF01535.17^PPR^PPR repeat^455-480^E:0.023`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^555-678^E:7.5e-40",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G41080",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN46632_c7_g5","leaves S. abrotanoides","roots S. abrotanoides",1.13588935766076,"0.00688935637455244","0.00951342640465807","TRINITY_DN46632_c7_g5_i1","PP169_ARATH^PP169_ARATH^Q:1966-122,H:40-654^41.61%ID^E:2e-163^RecName: Full=Pentatricopeptide repeat-containing protein At2g22410, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46632_c7_g5_i1.p1","32-2041[-]","PP169_ARATH^PP169_ARATH^Q:26-640,H:40-654^41.61%ID^E:3e-164^RecName: Full=Pentatricopeptide repeat-containing protein At2g22410, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^106-133^E:0.00014`PF13041.3^PPR_2^PPR repeat family^206-253^E:1.3e-12`PF12854.4^PPR_1^PPR repeat^206-234^E:2.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^206-254^E:1.8e-05`PF01535.17^PPR^PPR repeat^208-237^E:3.1e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^268-304^E:0.0028`PF01535.17^PPR^PPR repeat^281-307^E:0.00011`PF12854.4^PPR_1^PPR repeat^306-334^E:1.7e-07`PF13041.3^PPR_2^PPR repeat family^307-339^E:5.7e-08`PF01535.17^PPR^PPR repeat^309-339^E:2.8e-09`PF12854.4^PPR_1^PPR repeat^335-366^E:9.4e-08`PF13041.3^PPR_2^PPR repeat family^338-386^E:5.1e-10`PF01535.17^PPR^PPR repeat^340-368^E:2.3e-09`PF01535.17^PPR^PPR repeat^415-441^E:0.0015`PF13041.3^PPR_2^PPR repeat family^440-488^E:3e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^441-487^E:5e-05`PF01535.17^PPR^PPR repeat^443-473^E:3.6e-08`PF01535.17^PPR^PPR repeat^479-505^E:0.54`PF01535.17^PPR^PPR repeat^515-539^E:0.013",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G22410","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN47723_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",1.13464139247082,"0.00171332567546872","0.00249925404705732","TRINITY_DN47723_c1_g5_i1","R1B23_SOLDE^R1B23_SOLDE^Q:500-159,H:744-858^27.83%ID^E:1e-10^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47723_c1_g5_i1.p1","3-500[-]","R1B23_SOLDE^R1B23_SOLDE^Q:1-114,H:744-858^27.83%ID^E:9e-11^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN45234_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.13282693058981,{"v":9563588747.63572,"d":"9.56E+09"},"0.000153352316376711","TRINITY_DN45234_c0_g1_i3","ALY3_ARATH^ALY3_ARATH^Q:3617-252,H:21-1132^45.53%ID^E:0^RecName: Full=Protein ALWAYS EARLY 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45234_c0_g1_i3.p1","249-3671[-]","ALY3_ARATH^ALY3_ARATH^Q:19-1140,H:21-1132^45.91%ID^E:0^RecName: Full=Protein ALWAYS EARLY 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^44-77^E:9.2e-06`PF06584.10^DIRP^DIRP^636-736^E:9.6e-33",".",".","ENOG410YA1T^lin-9 homolog (C. elegans)","KEGG:ath:AT3G21430","GO:0005634^cellular_component^nucleus`GO:0017053^cellular_component^transcriptional repressor complex`GO:0003677^molecular_function^DNA binding`GO:0007049^biological_process^cell cycle`GO:0006351^biological_process^transcription, DNA-templated","GO:0006351^biological_process^transcription, DNA-templated`GO:0007049^biological_process^cell cycle`GO:0017053^cellular_component^transcriptional repressor complex",".","."]
["TRINITY_DN28582_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.12980612881926,"0.0121434820230197","0.0163644177281667","TRINITY_DN28582_c0_g1_i1","PP449_ARATH^PP449_ARATH^Q:1799-585,H:83-491^37.35%ID^E:6e-81^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP449_ARATH^PP449_ARATH^Q:1715-777,H:7-326^26.14%ID^E:7e-23^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28582_c0_g1_i1.p1","561-1898[-]","PP449_ARATH^PP449_ARATH^Q:34-438,H:83-491^37.35%ID^E:4e-83^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP449_ARATH^PP449_ARATH^Q:62-374,H:7-326^26.14%ID^E:1e-23^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^129-154^E:0.00014`PF01535.17^PPR^PPR repeat^161-186^E:0.00041`PF01535.17^PPR^PPR repeat^237-263^E:0.11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^261-309^E:2.4e-08`PF13041.3^PPR_2^PPR repeat family^262-309^E:1.6e-12`PF01535.17^PPR^PPR repeat^264-294^E:4.9e-06`PF01535.17^PPR^PPR repeat^299-323^E:0.22`PF01535.17^PPR^PPR repeat^332-356^E:0.0087",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G66520","GO:0009507^cellular_component^chloroplast`GO:1900865^biological_process^chloroplast RNA modification`GO:0016554^biological_process^cytidine to uridine editing",".",".","."]
["TRINITY_DN46808_c2_g6","leaves S. abrotanoides","roots S. abrotanoides",1.12771926953908,"0.00792970857749631","0.01088799127401","TRINITY_DN46808_c2_g6_i1","LEC2_CLAKE^LEC2_CLAKE^Q:956-234,H:39-289^35.52%ID^E:6e-30^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN46808_c2_g6_i1.p1","246-986[-]","LEC2_CLAKE^LEC2_CLAKE^Q:11-245,H:39-283^35.97%ID^E:2e-29^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^12-239^E:2.2e-38",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN44072_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",1.12432987548826,"0.0195659472463598","0.0257447663950349","TRINITY_DN44072_c3_g2_i1","HT1_ARATH^HT1_ARATH^Q:148-1173,H:42-390^88.54%ID^E:0^RecName: Full=Serine/threonine-protein kinase HT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44072_c3_g2_i1.p1","55-1176[+]","HT1_ARATH^HT1_ARATH^Q:1-373,H:1-390^82.82%ID^E:0^RecName: Full=Serine/threonine-protein kinase HT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^78-330^E:1.9e-68`PF00069.22^Pkinase^Protein kinase domain^84-328^E:8.7e-57`PF14531.3^Kinase-like^Kinase-like^165-281^E:7.6e-08",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G62400","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN42367_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.12360837309705,"0.0139027434376848","0.0186133488267795","TRINITY_DN42367_c0_g1_i5","PXL2_ARATH^PXL2_ARATH^Q:701-1909,H:502-880^34.68%ID^E:1e-77^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:1977-2282,H:876-980^34.29%ID^E:1e-77^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:303-635,H:358-470^31.86%ID^E:1e-77^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:701-958,H:238-325^37.5%ID^E:9e-11^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:378-632,H:145-229^34.12%ID^E:9e-11^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:611-1153,H:351-552^24.76%ID^E:3e-09^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:345-635,H:251-350^34%ID^E:3e-09^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:336-632,H:203-301^30.3%ID^E:1e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:698-967,H:333-424^28.26%ID^E:1e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:378-638,H:457-543^36.78%ID^E:2e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:366-647,H:501-594^34.04%ID^E:3e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:641-967,H:169-280^33.04%ID^E:4e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42367_c0_g1_i5.p1","1136-1930[+]","BAME1_ARATH^BAME1_ARATH^Q:43-258,H:669-871^47.69%ID^E:2e-54^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^70-253^E:1.5e-33`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^71-253^E:1.4e-27",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G65700","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0043621^molecular_function^protein self-association`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0033612^molecular_function^receptor serine/threonine kinase binding`GO:0030154^biological_process^cell differentiation`GO:0048437^biological_process^floral organ development`GO:0048229^biological_process^gametophyte development`GO:0010075^biological_process^regulation of meristem growth","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44849_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.12022810256274,"0.00454346899763497","0.006388623534864","TRINITY_DN44849_c1_g1_i4","Y4729_ARATH^Y4729_ARATH^Q:332-6,H:622-731^66.36%ID^E:1e-47^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44849_c1_g1_i4.p1","3-335[-]","Y4729_ARATH^Y4729_ARATH^Q:2-110,H:622-731^66.36%ID^E:1e-47^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^4-110^E:9e-09`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^11-110^E:3.4e-09",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27290","GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN21549_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.11825601618964,"0.00376557270101047","0.00533958248002535","TRINITY_DN21549_c0_g1_i2","PP307_ARATH^PP307_ARATH^Q:513-2120,H:63-601^28.6%ID^E:4e-105^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:2132-3025,H:637-935^34%ID^E:4e-105^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:570-2129,H:289-806^28.87%ID^E:3e-72^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:2171-2971,H:249-547^24.84%ID^E:3e-19^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:2144-2767,H:439-646^25.48%ID^E:6e-19^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:306-1097,H:608-870^25.83%ID^E:8e-19^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:2162-2764,H:547-746^26.37%ID^E:1e-18^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:2168-2986,H:140-451^26.88%ID^E:6e-17^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:2144-2785,H:338-551^26.39%ID^E:9e-16^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP307_ARATH^PP307_ARATH^Q:2285-2827,H:80-262^25.65%ID^E:3e-06^RecName: Full=Pentatricopeptide repeat-containing protein At4g13650;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN21549_c0_g1_i2.p1","165-2150[+]","PPR48_ARATH^PPR48_ARATH^Q:62-657,H:113-716^31.3%ID^E:1e-90^RecName: Full=Pentatricopeptide repeat-containing protein At1g18485;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR48_ARATH^PPR48_ARATH^Q:55-651,H:208-812^25.29%ID^E:2e-53^RecName: Full=Pentatricopeptide repeat-containing protein At1g18485;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^199-248^E:3e-07`PF01535.17^PPR^PPR repeat^203-228^E:0.00014`PF13812.3^PPR_3^Pentatricopeptide repeat domain^300-349^E:0.0057`PF01535.17^PPR^PPR repeat^304-318^E:1.1`PF01535.17^PPR^PPR repeat^377-402^E:0.0082`PF01535.17^PPR^PPR repeat^408-436^E:0.0013`PF13041.3^PPR_2^PPR repeat family^504-548^E:4e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^505-548^E:0.0077`PF01535.17^PPR^PPR repeat^507-537^E:6.8e-08`PF01535.17^PPR^PPR repeat^580-606^E:0.62`PF01535.17^PPR^PPR repeat^608-636^E:0.53",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G18485",".",".",".","."]
["TRINITY_DN44782_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.11626995118098,"0.00820127374026813","0.0112450793064825","TRINITY_DN44782_c0_g1_i2","PPR38_ARATH^PPR38_ARATH^Q:201-1793,H:68-598^34.96%ID^E:1e-110^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:735-1811,H:70-466^26.2%ID^E:5e-40^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:192-1346,H:275-588^24.94%ID^E:8e-29^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:1260-1832,H:70-260^26.18%ID^E:5e-14^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:186-920,H:378-586^25.31%ID^E:1e-10^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44782_c0_g1_i2.p1","3-1841[+]","PPR38_ARATH^PPR38_ARATH^Q:67-597,H:68-598^35.15%ID^E:2e-121^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:62-518,H:133-588^28.45%ID^E:5e-60^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:245-603,H:70-466^26.2%ID^E:3e-41^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:64-414,H:275-589^24.79%ID^E:7e-28^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:62-352,H:308-596^27.74%ID^E:6e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:420-610,H:70-260^26.18%ID^E:2e-14^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^74-132^E:2.2e-05`PF13041.3^PPR_2^PPR repeat family^85-133^E:1.4e-09`PF01535.17^PPR^PPR repeat^123-148^E:0.23`PF12854.4^PPR_1^PPR repeat^152-182^E:2.7e-07`PF01535.17^PPR^PPR repeat^159-183^E:0.063`PF01535.17^PPR^PPR repeat^198-219^E:0.38`PF13812.3^PPR_3^Pentatricopeptide repeat domain^215-271^E:3.9e-05`PF12854.4^PPR_1^PPR repeat^225-254^E:9.8e-09`PF13041.3^PPR_2^PPR repeat family^226-275^E:7.1e-14`PF01535.17^PPR^PPR repeat^230-258^E:3.9e-05`PF12854.4^PPR_1^PPR repeat^258-290^E:1.8e-05`PF13041.3^PPR_2^PPR repeat family^263-310^E:1.2e-14`PF01535.17^PPR^PPR repeat^264-294^E:5.8e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^285-324^E:0.0074`PF12854.4^PPR_1^PPR repeat^293-324^E:2.7e-10`PF01535.17^PPR^PPR repeat^299-327^E:8.6e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^324-379^E:5.6e-13`PF12854.4^PPR_1^PPR repeat^329-357^E:9.2e-09`PF13041.3^PPR_2^PPR repeat family^332-380^E:1.1e-17`PF01535.17^PPR^PPR repeat^334-364^E:1.1e-06`PF12854.4^PPR_1^PPR repeat^362-393^E:1.4e-13`PF13041.3^PPR_2^PPR repeat family^366-413^E:1.3e-16`PF01535.17^PPR^PPR repeat^369-399^E:1.8e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^390-446^E:0.0003`PF13041.3^PPR_2^PPR repeat family^404-450^E:1.7e-14`PF01535.17^PPR^PPR repeat^405-431^E:0.0035`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^416-506^E:2.5e-07`PF12854.4^PPR_1^PPR repeat^434-464^E:1.7e-06`PF01535.17^PPR^PPR repeat^440-469^E:0.00058`PF13041.3^PPR_2^PPR repeat family^444-485^E:1.5e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^459-517^E:1.6e-11`PF12854.4^PPR_1^PPR repeat^467-498^E:7.4e-11`PF13041.3^PPR_2^PPR repeat family^471-508^E:7.3e-09`PF01535.17^PPR^PPR repeat^474-503^E:3e-05`PF12854.4^PPR_1^PPR repeat^502-535^E:3.2e-06`PF13041.3^PPR_2^PPR repeat family^506-551^E:1.3e-10`PF01535.17^PPR^PPR repeat^510-539^E:0.00045`PF12854.4^PPR_1^PPR repeat^538-569^E:1.3e-06`PF13041.3^PPR_2^PPR repeat family^542-586^E:1.2e-10`PF01535.17^PPR^PPR repeat^544-572^E:0.0028",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12700","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN47331_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",1.11548990835815,"0.0194949888409336","0.0256563310151048","TRINITY_DN47331_c1_g3_i1","EDR2L_ARATH^EDR2L_ARATH^Q:460-1722,H:289-719^72.85%ID^E:0^RecName: Full=Protein ENHANCED DISEASE RESISTANCE 2-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47331_c1_g3_i1.p1","661-1728[+]","EDR2L_ARATH^EDR2L_ARATH^Q:1-354,H:356-719^71.15%ID^E:3e-172^RecName: Full=Protein ENHANCED DISEASE RESISTANCE 2-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07059.9^DUF1336^Protein of unknown function (DUF1336)^138-341^E:4.1e-70",".",".","ENOG4112846^Domain containing protein, expressed","KEGG:ath:AT5G45560","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0008289^molecular_function^lipid binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN40354_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.10224776574266,"0.00824730291320753","0.011304795298211","TRINITY_DN40354_c0_g1_i1","PP333_ARATH^PP333_ARATH^Q:2391-145,H:32-784^32.02%ID^E:2e-130^RecName: Full=Pentatricopeptide repeat-containing protein At4g21300;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40354_c0_g1_i1.p1","127-2490[-]","PP333_ARATH^PP333_ARATH^Q:34-787,H:32-789^31.94%ID^E:7e-133^RecName: Full=Pentatricopeptide repeat-containing protein At4g21300;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^101-130^E:0.29`PF01535.17^PPR^PPR repeat^173-199^E:0.97`PF13812.3^PPR_3^Pentatricopeptide repeat domain^198-244^E:7e-06`PF13041.3^PPR_2^PPR repeat family^199-246^E:6.8e-10`PF01535.17^PPR^PPR repeat^201-217^E:0.063`PF01535.17^PPR^PPR repeat^308-332^E:0.0022`PF01535.17^PPR^PPR repeat^377-398^E:1.2`PF01535.17^PPR^PPR repeat^407-430^E:0.063`PF01535.17^PPR^PPR repeat^506-534^E:0.0062`PF01535.17^PPR^PPR repeat^579-605^E:0.16`PF01535.17^PPR^PPR repeat^609-637^E:2.2e-07`PF13041.3^PPR_2^PPR repeat family^609-653^E:5.9e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^629-676^E:0.0085`PF01535.17^PPR^PPR repeat^643-671^E:0.0045`PF01535.17^PPR^PPR repeat^680-703^E:0.0052",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G21300",".",".",".","."]
["TRINITY_DN44390_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.08233591415179,"0.0048101258830586","0.00675118795775467","TRINITY_DN44390_c1_g1_i1","DR206_PEA^DR206_PEA^Q:70-573,H:16-184^62.13%ID^E:3e-74^RecName: Full=Disease resistance response protein 206;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44390_c1_g1_i1.p1","1-576[+]","DR206_PEA^DR206_PEA^Q:9-191,H:1-184^58.15%ID^E:8e-76^RecName: Full=Disease resistance response protein 206;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF03018.11^Dirigent^Dirigent-like protein^38-185^E:2.6e-37","sigP:1^24^0.885^YES",".",".",".","GO:0048046^cellular_component^apoplast`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN46617_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.08150954045442,"0.000526476644677932","0.000799983905511116","TRINITY_DN46617_c0_g1_i2","NHX2_ARATH^NHX2_ARATH^Q:80-1015,H:237-542^70.79%ID^E:1e-151^RecName: Full=Sodium/hydrogen exchanger 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46617_c0_g1_i2.p1","137-1042[+]","NHX2_ARATH^NHX2_ARATH^Q:1-293,H:256-542^71.62%ID^E:1e-146^RecName: Full=Sodium/hydrogen exchanger 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00999.18^Na_H_Exchanger^Sodium/hydrogen exchanger family^2-186^E:1.9e-26",".",".","COG0025^Sodium hydrogen exchanger","KEGG:ath:AT3G05030","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015386^molecular_function^potassium:proton antiporter activity`GO:0015385^molecular_function^sodium:proton antiporter activity`GO:0055075^biological_process^potassium ion homeostasis`GO:0010107^biological_process^potassium ion import`GO:0006885^biological_process^regulation of pH`GO:0090333^biological_process^regulation of stomatal closure`GO:0009651^biological_process^response to salt stress`GO:0035725^biological_process^sodium ion transmembrane transport","GO:0015299^molecular_function^solute:proton antiporter activity`GO:0006812^biological_process^cation transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46112_c6_g4","leaves S. abrotanoides","roots S. abrotanoides",1.07633873280312,"0.0335509760106767","0.0429813509286719","TRINITY_DN46112_c6_g4_i1","FDL37_ARATH^FDL37_ARATH^Q:290-451,H:11-64^50%ID^E:1e-07^RecName: Full=F-box/FBD/LRR-repeat protein At5g53840;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46112_c6_g4_i1.p1","185-550[+]","FDL37_ARATH^FDL37_ARATH^Q:36-89,H:11-64^50%ID^E:4e-08^RecName: Full=F-box/FBD/LRR-repeat protein At5g53840;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^44-79^E:7.7e-07",".",".","ENOG411188E^F-box FBD LRR-repeat protein","KEGG:ath:AT5G53840",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46609_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",1.07345215201862,"0.000118504417155438","0.000188882797145946","TRINITY_DN46609_c0_g3_i1","PP330_ARATH^PP330_ARATH^Q:255-1985,H:14-595^62.09%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g21065;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46609_c0_g3_i1.p1","141-1988[+]","PP330_ARATH^PP330_ARATH^Q:39-615,H:14-595^62.09%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g21065;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^107-134^E:0.0033`PF01535.17^PPR^PPR repeat^180-205^E:0.19`PF13041.3^PPR_2^PPR repeat family^206-252^E:1.8e-08`PF01535.17^PPR^PPR repeat^208-234^E:5.7e-06`PF01535.17^PPR^PPR repeat^280-307^E:0.0013`PF13041.3^PPR_2^PPR repeat family^307-353^E:1.6e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^307-353^E:0.0003`PF01535.17^PPR^PPR repeat^309-338^E:1.8e-07`PF01535.17^PPR^PPR repeat^345-371^E:0.086`PF01535.17^PPR^PPR repeat^381-405^E:0.49`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^481-604^E:1.3e-36",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G21065",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN47248_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",1.07151995669684,"0.000446746197144007","0.000681898055540375","TRINITY_DN47248_c0_g3_i4","Y1670_ARATH^Y1670_ARATH^Q:1628-2509,H:544-845^59.28%ID^E:4e-107^RecName: Full=Probable receptor-like protein kinase At1g67000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1670_ARATH^Y1670_ARATH^Q:372-1019,H:34-225^32.42%ID^E:1e-12^RecName: Full=Probable receptor-like protein kinase At1g67000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1670_ARATH^Y1670_ARATH^Q:345-1061,H:245-475^27.38%ID^E:2e-09^RecName: Full=Probable receptor-like protein kinase At1g67000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47248_c0_g3_i4.p1","1502-2509[+]","Y1670_ARATH^Y1670_ARATH^Q:43-336,H:544-845^60.26%ID^E:4e-118^RecName: Full=Probable receptor-like protein kinase At1g67000;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^57-330^E:1.5e-46`PF00069.22^Pkinase^Protein kinase domain^58-328^E:7.2e-49",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G67000","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46385_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",1.06987613730664,"0.0109126286523284","0.0147799243439859","TRINITY_DN46385_c1_g3_i1","CRF4_ARATH^CRF4_ARATH^Q:641-1156,H:10-162^44.32%ID^E:3e-22^RecName: Full=Ethylene-responsive transcription factor CRF4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46385_c1_g3_i1.p2","611-1156[+]","CRF4_ARATH^CRF4_ARATH^Q:11-182,H:10-162^46.29%ID^E:7e-38^RecName: Full=Ethylene-responsive transcription factor CRF4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^137-181^E:7e-11",".",".","ENOG410YM3E^Transcription factor","KEGG:ath:AT4G27950","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009736^biological_process^cytokinin-activated signaling pathway`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0048366^biological_process^leaf development`GO:0042991^biological_process^transcription factor import into nucleus`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46620_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.06296336797567,"0.000392910305649843","0.000602175121710955","TRINITY_DN46620_c1_g1_i12","CYP1_SOYBN^CYP1_SOYBN^Q:575-180,H:39-170^84.09%ID^E:4e-64^RecName: Full=Peptidyl-prolyl cis-trans isomerase 1 {ECO:0000250|UniProtKB:O49886};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46620_c1_g1_i12.p2","174-575[-]","CP19B_ARATH^CP19B_ARATH^Q:1-133,H:40-172^81.2%ID^E:3e-75^RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^16-130^E:4e-38",".",".","COG0652^peptidyl-prolyl cis-trans isomerase activity","KEGG:ath:AT2G21130`KO:K01802","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN44280_c4_g8","leaves S. abrotanoides","roots S. abrotanoides",1.05851043052312,"0.00063338460181908","0.00095690872008893","TRINITY_DN44280_c4_g8_i2","CDPKB_ARATH^CDPKB_ARATH^Q:1473-46,H:11-486^80.25%ID^E:0^RecName: Full=Calcium-dependent protein kinase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44280_c4_g8_i2.p1","10-1509[-]","CDPKB_ARATH^CDPKB_ARATH^Q:11-488,H:9-486^79.92%ID^E:0^RecName: Full=Calcium-dependent protein kinase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^28-286^E:9.3e-76`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^30-280^E:1.1e-26`PF06293.11^Kdo^Lipopolysaccharide kinase (Kdo/WaaP) family^104-174^E:8e-06`PF13833.3^EF-hand_8^EF-hand domain pair^314-359^E:0.0054`PF00036.29^EF-hand_1^EF hand^334-360^E:2.9e-07`PF13405.3^EF-hand_6^EF-hand domain^334-361^E:7.3e-07`PF13499.3^EF-hand_7^EF-hand domain pair^334-394^E:1.1e-09`PF13202.3^EF-hand_5^EF hand^334-356^E:1.2e-05`PF13833.3^EF-hand_8^EF-hand domain pair^346-394^E:1.1e-08`PF13499.3^EF-hand_7^EF-hand domain pair^404-465^E:2.1e-11`PF13405.3^EF-hand_6^EF-hand domain^406-433^E:3.3e-07`PF00036.29^EF-hand_1^EF hand^408-432^E:9.8e-07`PF13202.3^EF-hand_5^EF hand^408-428^E:0.00011`PF12763.4^EF-hand_4^Cytoskeletal-regulatory complex EF hand^415-465^E:4.1e-05`PF13833.3^EF-hand_8^EF-hand domain pair^418-466^E:1e-10`PF00036.29^EF-hand_1^EF hand^440-466^E:1.2e-07`PF13202.3^EF-hand_5^EF hand^442-464^E:0.001",".",".","ENOG410XRMJ^calcium-dependent protein kinase","KEGG:ath:AT1G35670`KO:K13412","GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0009931^molecular_function^calcium-dependent protein serine/threonine kinase activity`GO:0005516^molecular_function^calmodulin binding`GO:0004683^molecular_function^calmodulin-dependent protein kinase activity`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0035556^biological_process^intracellular signal transduction`GO:0018105^biological_process^peptidyl-serine phosphorylation`GO:0009789^biological_process^positive regulation of abscisic acid-activated signaling pathway`GO:0046777^biological_process^protein autophosphorylation`GO:0006468^biological_process^protein phosphorylation`GO:1901979^biological_process^regulation of inward rectifier potassium channel activity`GO:0080092^biological_process^regulation of pollen tube growth","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation`GO:0016773^molecular_function^phosphotransferase activity, alcohol group as acceptor`GO:0016020^cellular_component^membrane`GO:0005509^molecular_function^calcium ion binding`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45514_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",1.05715832924049,"0.000217113320395772","0.000339784766096898","TRINITY_DN45514_c1_g1_i3","R13L4_ARATH^R13L4_ARATH^Q:358-83,H:148-237^38.3%ID^E:1e-09^RecName: Full=Disease resistance RPP13-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45514_c1_g1_i3.p1","41-592[-]","R13L4_ARATH^R13L4_ARATH^Q:79-170,H:148-237^38.3%ID^E:1e-09^RecName: Full=Disease resistance RPP13-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^100-173^E:3.9e-14",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G50950","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46514_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",1.05036817434753,"0.000513891454315827","0.000781554551154139","TRINITY_DN46514_c2_g1_i20","PNC1_ARATH^PNC1_ARATH^Q:1068-2021,H:1-321^68.32%ID^E:2e-132^RecName: Full=Peroxisomal adenine nucleotide carrier 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46514_c2_g1_i20.p1","1068-2027[+]","PNC1_ARATH^PNC1_ARATH^Q:1-318,H:1-321^68.32%ID^E:5e-159^RecName: Full=Peroxisomal adenine nucleotide carrier 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00153.24^Mito_carr^Mitochondrial carrier protein^7-96^E:1.5e-16`PF00153.24^Mito_carr^Mitochondrial carrier protein^103-188^E:1.4e-08`PF00153.24^Mito_carr^Mitochondrial carrier protein^203-297^E:3.2e-14",".",".","ENOG410ZNC0^peroxisomal membrane protein","KEGG:ath:AT3G05290","GO:0016021^cellular_component^integral component of membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0005777^cellular_component^peroxisome`GO:0015217^molecular_function^ADP transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0005347^molecular_function^ATP transmembrane transporter activity`GO:0003735^molecular_function^structural constituent of ribosome`GO:0015866^biological_process^ADP transport`GO:0015867^biological_process^ATP transport`GO:0006635^biological_process^fatty acid beta-oxidation`GO:0080024^biological_process^indolebutyric acid metabolic process`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN45984_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",1.04732983714282,"0.00220132673958731","0.00318245763740665","TRINITY_DN45984_c0_g2_i1","MYB44_ARATH^MYB44_ARATH^Q:155-466,H:4-107^65.38%ID^E:2e-44^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45984_c0_g2_i1.p1","92-1234[+]","MYB44_ARATH^MYB44_ARATH^Q:22-125,H:4-107^65.38%ID^E:1e-45^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^24-69^E:3.1e-15`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^27-84^E:1.7e-13`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^76-120^E:1.6e-15`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^79-124^E:3e-09",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT5G67300`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:2000022^biological_process^regulation of jasmonic acid mediated signaling pathway`GO:2000031^biological_process^regulation of salicylic acid mediated signaling pathway`GO:0009737^biological_process^response to abscisic acid`GO:0009733^biological_process^response to auxin`GO:0046686^biological_process^response to cadmium ion`GO:0010200^biological_process^response to chitin`GO:0009723^biological_process^response to ethylene`GO:0009739^biological_process^response to gibberellin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN43906_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",1.04607085746071,"0.00102470874144898","0.0015228264119775","TRINITY_DN43906_c3_g2_i1","RFS_PEA^RFS_PEA^Q:267-2603,H:4-798^67.29%ID^E:0^RecName: Full=Galactinol--sucrose galactosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN43906_c3_g2_i1.p1","261-2606[+]","RFS_PEA^RFS_PEA^Q:3-781,H:4-798^67.54%ID^E:0^RecName: Full=Galactinol--sucrose galactosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF05691.9^Raffinose_syn^Raffinose synthase or seed imbibition protein Sip1^27-765^E:0",".",".",".",".","GO:0047274^molecular_function^galactinol-sucrose galactosyltransferase activity`GO:0005975^biological_process^carbohydrate metabolic process",".",".","."]
["TRINITY_DN46699_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",1.03786024952709,"0.0234249543336242","0.0305566656115487","TRINITY_DN46699_c1_g3_i2","PSKR1_ARATH^PSKR1_ARATH^Q:50-301,H:561-640^53.57%ID^E:6e-14^RecName: Full=Phytosulfokine receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PSKR1_ARATH^PSKR1_ARATH^Q:53-205,H:115-164^50.98%ID^E:3e-06^RecName: Full=Phytosulfokine receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46699_c1_g3_i2.p1","2-508[+]","EFR_ARATH^EFR_ARATH^Q:1-169,H:535-715^37.91%ID^E:4e-23^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:2-83,H:144-223^36.59%ID^E:5e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:5-69,H:443-507^40%ID^E:8e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^4-63^E:2.9e-08`PF00560.30^LRR_1^Leucine Rich Repeat^4-24^E:0.93`PF00560.30^LRR_1^Leucine Rich Repeat^29-48^E:0.3`PF13516.3^LRR_6^Leucine Rich repeat^29-41^E:2",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G20480`KO:K13428","GO:0012505^cellular_component^endomembrane system`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0019199^molecular_function^transmembrane receptor protein kinase activity`GO:0010204^biological_process^defense response signaling pathway, resistance gene-independent`GO:0016045^biological_process^detection of bacterium`GO:0002764^biological_process^immune response-regulating signaling pathway`GO:0009626^biological_process^plant-type hypersensitive response`GO:0010359^biological_process^regulation of anion channel activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45414_c5_g3","leaves S. abrotanoides","roots S. abrotanoides",1.0370018158385,"0.00344403745001012","0.00490268649894089","TRINITY_DN45414_c5_g3_i4","CYPH_SOLLC^CYPH_SOLLC^Q:407-3,H:1-135^83.7%ID^E:1e-71^RecName: Full=Peptidyl-prolyl cis-trans isomerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45414_c5_g3_i4.p1","3-470[-]","CYPH_SOLLC^CYPH_SOLLC^Q:22-156,H:1-135^83.7%ID^E:2e-81^RecName: Full=Peptidyl-prolyl cis-trans isomerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^28-156^E:2.6e-37",".",".","COG0652^peptidyl-prolyl cis-trans isomerase activity","KEGG:sly:100736432`KO:K01802","GO:0005737^cellular_component^cytoplasm`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN41707_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.03439956320284,"0.00043468013407599","0.000663887897339664","TRINITY_DN41707_c0_g1_i3","E139_ARATH^E139_ARATH^Q:500-1537,H:116-455^62.43%ID^E:3e-139^RecName: Full=Glucan endo-1,3-beta-glucosidase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41707_c0_g1_i3.p1","713-1621[+]","E139_ARATH^E139_ARATH^Q:1-275,H:187-455^64%ID^E:6e-121^RecName: Full=Glucan endo-1,3-beta-glucosidase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^3-161^E:5.9e-32`PF07983.10^X8^X8 domain^181-250^E:7.9e-16",".",".","ENOG410YE41^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT5G58480","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005886^cellular_component^plasma membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44214_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",1.02235658090341,"0.00281146113693091","0.00402942742136392","TRINITY_DN44214_c1_g5_i1","PP201_ARATH^PP201_ARATH^Q:1330-113,H:119-548^43.85%ID^E:2e-119^RecName: Full=Pentatricopeptide repeat-containing protein At2g44880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP201_ARATH^PP201_ARATH^Q:1291-377,H:29-336^24.05%ID^E:2e-16^RecName: Full=Pentatricopeptide repeat-containing protein At2g44880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP201_ARATH^PP201_ARATH^Q:1078-590,H:7-170^27.44%ID^E:2e-09^RecName: Full=Pentatricopeptide repeat-containing protein At2g44880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44214_c1_g5_i1.p1","71-1270[-]","PP201_ARATH^PP201_ARATH^Q:1-386,H:139-548^44.53%ID^E:1e-116^RecName: Full=Pentatricopeptide repeat-containing protein At2g44880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP201_ARATH^PP201_ARATH^Q:67-298,H:112-336^25.32%ID^E:1e-15^RecName: Full=Pentatricopeptide repeat-containing protein At2g44880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP201_ARATH^PP201_ARATH^Q:65-227,H:7-170^27.44%ID^E:2e-09^RecName: Full=Pentatricopeptide repeat-containing protein At2g44880;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^4-35^E:3e-07`PF01535.17^PPR^PPR repeat^7-36^E:1.3e-06`PF01535.17^PPR^PPR repeat^38-67^E:9.1e-06`PF12854.4^PPR_1^PPR repeat^67-94^E:4.3e-06`PF01535.17^PPR^PPR repeat^69-97^E:3e-06`PF01535.17^PPR^PPR repeat^101-125^E:0.0082`PF01535.17^PPR^PPR repeat^174-198^E:0.11`PF13041.3^PPR_2^PPR repeat family^200-246^E:1.1e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^200-246^E:2.2e-07`PF01535.17^PPR^PPR repeat^203-232^E:3.9e-07`PF01535.17^PPR^PPR repeat^238-265^E:0.089",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G44880",".",".",".","."]
["TRINITY_DN45255_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.02209620070089,"0.0235920211178302","0.0307643370765058","TRINITY_DN45255_c0_g1_i1","PME1_ARATH^PME1_ARATH^Q:139-1800,H:1-581^57.95%ID^E:0^RecName: Full=Pectinesterase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45255_c0_g1_i1.p1","139-1818[+]","PME3_PHAVU^PME3_PHAVU^Q:1-559,H:1-580^56.78%ID^E:0^RecName: Full=Pectinesterase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus","PF04043.12^PMEI^Plant invertase/pectin methylesterase inhibitor^70-211^E:1.9e-23`PF01095.16^Pectinesterase^Pectinesterase^253-545^E:3.8e-131",".",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0045330^molecular_function^aspartyl esterase activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0045490^biological_process^pectin catabolic process","GO:0004857^molecular_function^enzyme inhibitor activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0005618^cellular_component^cell wall",".","."]
["TRINITY_DN45739_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",1.02189944300764,"0.0244343352739305","0.0318142457708164","TRINITY_DN45739_c1_g2_i1","PP191_ARATH^PP191_ARATH^Q:2558-702,H:16-635^55.68%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g37310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45739_c1_g2_i1.p1","708-2591[-]","PP191_ARATH^PP191_ARATH^Q:12-627,H:16-632^55.79%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g37310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^169-195^E:0.36`PF01535.17^PPR^PPR repeat^197-226^E:1.7e-07`PF01535.17^PPR^PPR repeat^270-296^E:0.00042`PF12854.4^PPR_1^PPR repeat^297-325^E:5e-06`PF01535.17^PPR^PPR repeat^299-327^E:1.8e-07`PF13041.3^PPR_2^PPR repeat family^328-371^E:2.9e-07`PF01535.17^PPR^PPR repeat^331-360^E:6.1e-05`PF01535.17^PPR^PPR repeat^402-428^E:0.013`PF13041.3^PPR_2^PPR repeat family^429-476^E:4.3e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^429-475^E:7.8e-07`PF01535.17^PPR^PPR repeat^432-460^E:3.1e-06`PF01535.17^PPR^PPR repeat^466-490^E:0.00092`PF01535.17^PPR^PPR repeat^504-529^E:0.058`PF01535.17^PPR^PPR repeat^570-598^E:0.0045`PF13176.3^TPR_7^Tetratricopeptide repeat^573-592^E:0.019",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G37310",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45073_c5_g5","leaves S. abrotanoides","roots S. abrotanoides",1.01530674718881,"0.000280699737350095","0.000435218895184737","TRINITY_DN45073_c5_g5_i3","ING1_ARATH^ING1_ARATH^Q:1043-318,H:1-234^64.88%ID^E:1e-97^RecName: Full=PHD finger protein ING1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45073_c5_g5_i3.p1","315-1043[-]","ING1_ARATH^ING1_ARATH^Q:1-242,H:1-234^64.88%ID^E:5e-103^RecName: Full=PHD finger protein ING1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12998.4^ING^Inhibitor of growth proteins N-terminal histone-binding^5-111^E:1.4e-20",".",".","COG5034^Inhibitor of growth family member","KEGG:ath:AT3G24010`KO:K11346","GO:0005634^cellular_component^nucleus`GO:0035064^molecular_function^methylated histone binding`GO:0008270^molecular_function^zinc ion binding`GO:0016568^biological_process^chromatin modification`GO:0040008^biological_process^regulation of growth`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN39965_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.01509405677882,"0.000316157635695416","0.000488232829813196","TRINITY_DN39965_c0_g1_i3","ETR1_PRUPE^ETR1_PRUPE^Q:61-1836,H:1-594^70.71%ID^E:0^RecName: Full=Ethylene receptor;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN39965_c0_g1_i3.p1","61-1896[+]","ETR1_PRUPE^ETR1_PRUPE^Q:1-592,H:1-594^70.71%ID^E:0^RecName: Full=Ethylene receptor;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF01590.23^GAF^GAF domain^158-305^E:1.5e-10`PF00512.22^HisKA^His Kinase A (phospho-acceptor) domain^341-406^E:3e-15`PF02518.23^HATPase_c^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^453-583^E:2.2e-25",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0051740^molecular_function^ethylene binding`GO:0038199^molecular_function^ethylene receptor activity`GO:0046872^molecular_function^metal ion binding`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0010105^biological_process^negative regulation of ethylene-activated signaling pathway","GO:0005515^molecular_function^protein binding`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0007165^biological_process^signal transduction",".","."]
["TRINITY_DN37498_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.00587880252329,"0.025995661066185","0.0337548704988872","TRINITY_DN37498_c0_g1_i2","PP353_ARATH^PP353_ARATH^Q:1345-236,H:322-691^66.49%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP353_ARATH^PP353_ARATH^Q:2156-1338,H:27-299^52.38%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP353_ARATH^PP353_ARATH^Q:1297-710,H:237-428^31.86%ID^E:1e-22^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP353_ARATH^PP353_ARATH^Q:1940-1362,H:232-392^28.35%ID^E:1e-16^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP353_ARATH^PP353_ARATH^Q:1339-689,H:90-302^25.91%ID^E:2e-15^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP353_ARATH^PP353_ARATH^Q:1991-1587,H:314-461^27.03%ID^E:5e-09^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37498_c0_g1_i2.p1","233-1345[-]","PP353_ARATH^PP353_ARATH^Q:1-370,H:322-691^66.49%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP353_ARATH^PP353_ARATH^Q:17-212,H:237-428^31.86%ID^E:7e-24^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP353_ARATH^PP353_ARATH^Q:3-219,H:90-302^25.91%ID^E:2e-16^RecName: Full=Pentatricopeptide repeat-containing protein At4g37170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^37-61^E:0.048`PF13041.3^PPR_2^PPR repeat family^62-109^E:1.9e-10`PF01535.17^PPR^PPR repeat^65-94^E:7e-09`PF01535.17^PPR^PPR repeat^100-128^E:0.029`PF01535.17^PPR^PPR repeat^138-162^E:0.33`PF01535.17^PPR^PPR repeat^203-232^E:0.027`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^236-360^E:3.8e-40",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G37170",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN46729_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",1.0013876166583,"0.010937216861396","0.0148117610937492","TRINITY_DN46729_c4_g1_i8","MYO2_ARATH^MYO2_ARATH^Q:3881-1692,H:15-756^60.73%ID^E:0^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MYO2_ARATH^MYO2_ARATH^Q:1680-358,H:755-1215^47.64%ID^E:3e-110^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46729_c4_g1_i8.p1","1656-3920[-]","MYO2_ARATH^MYO2_ARATH^Q:1-743,H:2-756^60.59%ID^E:0^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00063.18^Myosin_head^Myosin head (motor domain)^212-736^E:8.5e-195",".",".","COG5022^myosin heavy chain","KEGG:ath:AT5G54280`KO:K10357","GO:0005768^cellular_component^endosome`GO:0016459^cellular_component^myosin complex`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0003774^molecular_function^motor activity`GO:0030048^biological_process^actin filament-based movement`GO:0006897^biological_process^endocytosis","GO:0003774^molecular_function^motor activity`GO:0005524^molecular_function^ATP binding`GO:0016459^cellular_component^myosin complex",".","."]
["TRINITY_DN4845_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",1.00017453631593,"0.00156286633225672","0.0022869646115634","TRINITY_DN4845_c0_g1_i1","PP118_ARATH^PP118_ARATH^Q:333-2984,H:85-971^58.68%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g73710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN4845_c0_g1_i1.p1","3-3053[+]","PP118_ARATH^PP118_ARATH^Q:81-994,H:49-971^57.91%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g73710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^173-202^E:0.13`PF01535.17^PPR^PPR repeat^208-237^E:5.3e-05`PF13041.3^PPR_2^PPR repeat family^323-364^E:4.7e-12`PF01535.17^PPR^PPR repeat^324-353^E:1.9e-08`PF12854.4^PPR_1^PPR repeat^324-348^E:7e-07`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^328-489^E:1.5e-08`PF12854.4^PPR_1^PPR repeat^352-384^E:1.3e-05`PF13041.3^PPR_2^PPR repeat family^356-402^E:3.3e-12`PF01535.17^PPR^PPR repeat^358-388^E:9.5e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^379-437^E:2.1e-08`PF01535.17^PPR^PPR repeat^394-422^E:0.025`PF01535.17^PPR^PPR repeat^429-455^E:0.27`PF01535.17^PPR^PPR repeat^498-520^E:0.09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^529-577^E:2.1e-07`PF13041.3^PPR_2^PPR repeat family^531-578^E:1.3e-11`PF01535.17^PPR^PPR repeat^535-562^E:1.1e-06`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^544-652^E:2.2e-11`PF13041.3^PPR_2^PPR repeat family^565-613^E:2.2e-08`PF12854.4^PPR_1^PPR repeat^565-593^E:1.1e-05`PF01535.17^PPR^PPR repeat^569-595^E:0.0029`PF01535.17^PPR^PPR repeat^603-629^E:0.031`PF13812.3^PPR_3^Pentatricopeptide repeat domain^624-684^E:5.2e-08`PF13041.3^PPR_2^PPR repeat family^635-683^E:5.8e-08`PF01535.17^PPR^PPR repeat^639-668^E:5.7e-06`PF01535.17^PPR^PPR repeat^674-699^E:0.0005`PF01535.17^PPR^PPR repeat^710-738^E:0.0015`PF01535.17^PPR^PPR repeat^742-772^E:0.075`PF01535.17^PPR^PPR repeat^779-803^E:0.24`PF13812.3^PPR_3^Pentatricopeptide repeat domain^877-930^E:2.4e-06`PF13041.3^PPR_2^PPR repeat family^883-928^E:1.4e-09`PF01535.17^PPR^PPR repeat^886-915^E:4.8e-05",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G73710",".",".",".","."]
["TRINITY_DN45896_c6_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.00595275179377,"0.000138894850486837","0.000220241918517637","TRINITY_DN45896_c6_g1_i1","CH62_CUCMA^CH62_CUCMA^Q:2073-385,H:1-563^84.37%ID^E:0^RecName: Full=Chaperonin CPN60-2, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita",".","TRINITY_DN45896_c6_g1_i1.p1","322-2196[-]","CH62_CUCMA^CH62_CUCMA^Q:42-604,H:1-563^84.37%ID^E:0^RecName: Full=Chaperonin CPN60-2, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita","PF00118.21^Cpn60_TCP1^TCP-1/cpn60 chaperonin family^95-596^E:2.1e-86",".",".",".",".","GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0042026^biological_process^protein refolding","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN45262_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.00957438807762,"0.0139868081551615","0.0187167457221711","TRINITY_DN45262_c1_g3_i1","MYOB3_ARATH^MYOB3_ARATH^Q:861-232,H:392-664^39.27%ID^E:3e-42^RecName: Full=Myosin-binding protein 3 {ECO:0000303|PubMed:23995081};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MYOB3_ARATH^MYOB3_ARATH^Q:1860-1372,H:1-149^37.13%ID^E:5e-19^RecName: Full=Myosin-binding protein 3 {ECO:0000303|PubMed:23995081};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45262_c1_g3_i1.p1","163-1860[-]","MYOB3_ARATH^MYOB3_ARATH^Q:302-543,H:360-664^40.07%ID^E:3e-51^RecName: Full=Myosin-binding protein 3 {ECO:0000303|PubMed:23995081};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MYOB3_ARATH^MYOB3_ARATH^Q:1-212,H:1-208^33.05%ID^E:1e-27^RecName: Full=Myosin-binding protein 3 {ECO:0000303|PubMed:23995081};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04576.12^Zein-binding^Zein-binding^302-391^E:8.2e-31",".",".","ENOG410YA8U^Pfam:DUF593","KEGG:ath:AT5G16720","GO:0016021^cellular_component^integral component of membrane`GO:0017022^molecular_function^myosin binding",".",".","."]
["TRINITY_DN38690_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.01001427752088,"0.000388109740069252","0.00059511753904784","TRINITY_DN38690_c0_g1_i1","NU133_ARATH^NU133_ARATH^Q:4063-140,H:1-1270^54.15%ID^E:0^RecName: Full=Nuclear pore complex protein NUP133 {ECO:0000303|PubMed:21189294};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38690_c0_g1_i1.p1","71-4063[-]","NU133_ARATH^NU133_ARATH^Q:1-1308,H:1-1270^54.15%ID^E:0^RecName: Full=Nuclear pore complex protein NUP133 {ECO:0000303|PubMed:21189294};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08801.8^Nucleoporin_N^Nup133 N terminal like^81-541^E:3.4e-33`PF03177.11^Nucleoporin_C^Non-repetitive/WGA-negative nucleoporin C-terminal^1015-1148^E:2.7e-07",".",".","ENOG410ZVJJ^Non-repetitive/WGA-negative nucleoporin C-terminal","KEGG:ath:AT2G05120`KO:K14300","GO:0009507^cellular_component^chloroplast`GO:0005643^cellular_component^nuclear pore`GO:0051028^biological_process^mRNA transport`GO:0015031^biological_process^protein transport",".",".","."]
["TRINITY_DN44224_c0_g5","leaves S. abrotanoides","roots S. abrotanoides",-1.01591616051644,"0.000864135844427123","0.00129240438188584","TRINITY_DN44224_c0_g5_i2","TBL19_ARATH^TBL19_ARATH^Q:509-1504,H:67-412^55.14%ID^E:3e-131^RecName: Full=Protein trichome birefringence-like 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44224_c0_g5_i2.p1","65-1531[+]","TBL19_ARATH^TBL19_ARATH^Q:149-480,H:67-412^55.14%ID^E:2e-132^RecName: Full=Protein trichome birefringence-like 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14416.3^PMR5N^PMR5 N terminal Domain^147-200^E:1.2e-23`PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^201-475^E:6e-83",".",".","ENOG410YEYH^Pfam:DUF231","KEGG:ath:AT5G15900","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:0071554^biological_process^cell wall organization or biogenesis",".",".","."]
["TRINITY_DN47367_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.01737628601368,"0.00107995207786566","0.00160144740323813","TRINITY_DN47367_c0_g1_i3","EDR2_ARATH^EDR2_ARATH^Q:1122-424,H:487-709^37.34%ID^E:4e-40^RecName: Full=Protein ENHANCED DISEASE RESISTANCE 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47367_c0_g1_i3.p1","271-1164[-]","EDR2_ARATH^EDR2_ARATH^Q:16-249,H:488-711^37.18%ID^E:5e-42^RecName: Full=Protein ENHANCED DISEASE RESISTANCE 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07059.9^DUF1336^Protein of unknown function (DUF1336)^30-244^E:4.6e-60",".",".","ENOG4112846^Domain containing protein, expressed","KEGG:ath:AT4G19040","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0070273^molecular_function^phosphatidylinositol-4-phosphate binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:1900056^biological_process^negative regulation of leaf senescence`GO:0009626^biological_process^plant-type hypersensitive response`GO:1900150^biological_process^regulation of defense response to fungus`GO:0009723^biological_process^response to ethylene`GO:0009751^biological_process^response to salicylic acid",".",".","."]
["TRINITY_DN45526_c2_g8","leaves S. abrotanoides","roots S. abrotanoides",-1.01957610470433,"0.00145067520133518","0.00212882309957992","TRINITY_DN45526_c2_g8_i1","IDD3_ARATH^IDD3_ARATH^Q:1-315,H:91-195^89.52%ID^E:3e-63^RecName: Full=Zinc finger protein MAGPIE {ECO:0000303|PubMed:17785527};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45526_c2_g8_i1.p1","1-945[+]","IDD12_ARATH^IDD12_ARATH^Q:1-268,H:103-355^49.67%ID^E:5e-74^RecName: Full=Protein indeterminate-domain 12 {ECO:0000303|PubMed:16784536};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5048^Zinc finger protein","KEGG:ath:AT4G02670","GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45325_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.02028148468466,"0.000106690382539752","0.000170568819773822","TRINITY_DN45325_c1_g3_i1","RLP2_ARATH^RLP2_ARATH^Q:2206-383,H:75-725^45.5%ID^E:2e-146^RecName: Full=Receptor-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45325_c1_g3_i1.p1","305-2332[-]","RLP2_ARATH^RLP2_ARATH^Q:5-650,H:32-725^45.35%ID^E:0^RecName: Full=Receptor-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^32-53^E:0.0011`PF13516.3^LRR_6^Leucine Rich repeat^101-116^E:0.086`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^175-188^E:1800`PF00560.30^LRR_1^Leucine Rich Repeat^294-314^E:1.9`PF13855.3^LRR_8^Leucine rich repeat^397-456^E:1.4e-09`PF13516.3^LRR_6^Leucine Rich repeat^420-434^E:0.15`PF00560.30^LRR_1^Leucine Rich Repeat^421-442^E:1.3`PF00560.30^LRR_1^Leucine Rich Repeat^547-567^E:1.1`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^656-661^E:6400","sigP:1^18^0.889^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G17240","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47106_c6_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.0223411003495,"0.000252228125901013","0.000392675124881883","TRINITY_DN47106_c6_g2_i2","R1A4_SOLDE^R1A4_SOLDE^Q:38-613,H:1030-1219^33%ID^E:3e-12^RecName: Full=Putative late blight resistance protein homolog R1A-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47106_c6_g2_i2.p1","2-691[+]","R1A4_SOLDE^R1A4_SOLDE^Q:13-213,H:1030-1228^33.97%ID^E:7e-14^RecName: Full=Putative late blight resistance protein homolog R1A-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN43728_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.0238563280983,"0.000641118949135417","0.000968006185717641","TRINITY_DN43728_c0_g1_i10","ARK3_ARATH^ARK3_ARATH^Q:303-1526,H:70-476^84.07%ID^E:0^RecName: Full=Armadillo repeat-containing kinesin-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43728_c0_g1_i10.p1","108-1547[+]","ARK3_ARATH^ARK3_ARATH^Q:5-473,H:11-476^76.65%ID^E:0^RecName: Full=Armadillo repeat-containing kinesin-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16796.2^Microtub_bd^Microtubule binding^64-209^E:2.3e-19`PF00225.20^Kinesin^Kinesin motor domain^72-409^E:6.3e-96",".",".","COG5059^Kinesin family member",".","GO:0005737^cellular_component^cytoplasm`GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0005524^molecular_function^ATP binding`GO:0003777^molecular_function^microtubule motor activity`GO:0007018^biological_process^microtubule-based movement","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN45200_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.02869238391713,"0.000237670811614646","0.000370686326504748","TRINITY_DN45200_c2_g2_i1","GGPPS_HEVBR^GGPPS_HEVBR^Q:1443-547,H:69-368^63.67%ID^E:7e-111^RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea",".","TRINITY_DN45200_c2_g2_i1.p1","538-1695[-]","GGPPS_HEVBR^GGPPS_HEVBR^Q:85-383,H:69-368^63.67%ID^E:2e-135^RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea","PF00348.14^polyprenyl_synt^Polyprenyl synthetase^121-355^E:3.1e-51",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004161^molecular_function^dimethylallyltranstransferase activity`GO:0004311^molecular_function^farnesyltranstransferase activity`GO:0004337^molecular_function^geranyltranstransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0045337^biological_process^farnesyl diphosphate biosynthetic process`GO:0033384^biological_process^geranyl diphosphate biosynthetic process`GO:0033386^biological_process^geranylgeranyl diphosphate biosynthetic process","GO:0008299^biological_process^isoprenoid biosynthetic process",".","."]
["TRINITY_DN46200_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.0352981489629,"0.000161340542831455","0.000254712486846569","TRINITY_DN46200_c2_g1_i1","Y1112_ARATH^Y1112_ARATH^Q:368-6,H:36-157^50.41%ID^E:1e-24^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46200_c2_g1_i1.p1","3-497[-]","Y1112_ARATH^Y1112_ARATH^Q:44-164,H:36-157^50.41%ID^E:1e-26^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^83-165^E:3.8e-19","sigP:1^24^0.694^YES",".","COG0515^Serine Threonine protein kinase",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen",".",".","."]
["TRINITY_DN45945_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.03679476740294,"0.000156222232858465","0.000246845551203886","TRINITY_DN45945_c3_g1_i1","TENAC_ARATH^TENAC_ARATH^Q:510-2264,H:63-615^47.25%ID^E:1e-157^RecName: Full=Probable aminopyrimidine aminohydrolase, mitochondrial {ECO:0000303|PubMed:25014715};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45945_c3_g1_i1.p2","492-1091[+]","TENAC_ARATH^TENAC_ARATH^Q:7-194,H:63-250^48.4%ID^E:4e-49^RecName: Full=Probable aminopyrimidine aminohydrolase, mitochondrial {ECO:0000303|PubMed:25014715};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111Z2Y^NA","KEGG:ath:AT5G32470","GO:0005829^cellular_component^cytosol`GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN42306_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.03739161599566,"0.013688785482287","0.0183439372057093","TRINITY_DN42306_c0_g1_i3","PARP3_SOYBN^PARP3_SOYBN^Q:321-2918,H:2-805^60.32%ID^E:0^RecName: Full=Poly [ADP-ribose] polymerase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN42306_c0_g1_i3.p1","642-2660[+]","PARP3_SOYBN^PARP3_SOYBN^Q:1-653,H:77-729^66.62%ID^E:0^RecName: Full=Poly [ADP-ribose] polymerase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF08063.9^PADR1^PADR1 (NUC008) domain^21-70^E:6.5e-17`PF00533.23^BRCT^BRCA1 C Terminus (BRCT) domain^109-185^E:1.5e-10`PF05406.12^WGR^WGR domain^257-335^E:1.1e-09`PF02877.11^PARP_reg^Poly(ADP-ribose) polymerase, regulatory domain^374-507^E:1.2e-16`PF00644.17^PARP^Poly(ADP-ribose) polymerase catalytic domain^510-653^E:5.3e-30",".",".","ENOG410XP18^Poly (ADP-ribose) polymerase","KEGG:gmx:548024`KO:K10798","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003910^molecular_function^DNA ligase (ATP) activity`GO:0003950^molecular_function^NAD+ ADP-ribosyltransferase activity`GO:0051103^biological_process^DNA ligation involved in DNA repair`GO:0006273^biological_process^lagging strand elongation`GO:0006471^biological_process^protein ADP-ribosylation","GO:0003950^molecular_function^NAD+ ADP-ribosyltransferase activity`GO:0006471^biological_process^protein ADP-ribosylation",".","."]
["TRINITY_DN6517_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.03749060688611,"0.00038227212990514","0.000586429004660642","TRINITY_DN6517_c0_g1_i2","H2A1_SOLLC^H2A1_SOLLC^Q:579-271,H:21-123^87.38%ID^E:2e-45^RecName: Full=Histone H2A.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN6517_c0_g1_i2.p1","208-645[-]","H2A5_ARATH^H2A5_ARATH^Q:1-145,H:1-150^78.67%ID^E:6e-78^RecName: Full=Probable histone H2A.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^20-97^E:4.8e-13`PF00808.20^CBFD_NFYB_HMF^Histone-like transcription factor (CBF/NF-Y) and archaeal histone^33-96^E:4.9e-05`PF16211.2^Histone_H2A_C^C-terminus of histone H2A^100-132^E:1.8e-17",".",".","COG5262^histone h2a","KEGG:ath:AT5G27670`KO:K11251","GO:0000792^cellular_component^heterochromatin`GO:0000790^cellular_component^nuclear chromatin`GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0003682^molecular_function^chromatin binding`GO:0003677^molecular_function^DNA binding`GO:0006342^biological_process^chromatin silencing","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN45505_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.04255680486574,"0.000116291143316225","0.000185441438238306","TRINITY_DN45505_c1_g2_i5","ANTR3_ARATH^ANTR3_ARATH^Q:1962-481,H:6-512^67.18%ID^E:0^RecName: Full=Probable anion transporter 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45505_c1_g2_i5.p1","478-2016[-]","ANTR3_ARATH^ANTR3_ARATH^Q:19-512,H:6-512^67.57%ID^E:0^RecName: Full=Probable anion transporter 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^110-470^E:3.7e-51`PF00083.21^Sugar_tr^Sugar (and other) transporter^130-271^E:8.4e-09",".",".","ENOG410XPWC^solute carrier family 17","KEGG:ath:AT2G38060","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009536^cellular_component^plastid`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0098656^biological_process^anion transmembrane transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0022857^molecular_function^transmembrane transporter activity",".","."]
["TRINITY_DN46092_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.04360595443889,"0.000137133819232733","0.000217539720751219","TRINITY_DN46092_c3_g2_i1","C82A3_SOYBN^C82A3_SOYBN^Q:1778-258,H:14-524^50.29%ID^E:5e-168^RecName: Full=Cytochrome P450 82A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46092_c3_g2_i1.p1","252-1796[-]","C82A3_SOYBN^C82A3_SOYBN^Q:7-513,H:14-524^50.29%ID^E:1e-177^RecName: Full=Cytochrome P450 82A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00067.19^p450^Cytochrome P450^40-489^E:2.8e-89",".",".","COG2124^Cytochrome p450","KEGG:gmx:100789386","GO:0016020^cellular_component^membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0044550^biological_process^secondary metabolite biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43910_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.04877022198315,{"v":6435603494.83807,"d":"6.44E+09"},"0.000104430299555052","TRINITY_DN43910_c0_g3_i6","MCA1_ARATH^MCA1_ARATH^Q:34-525,H:78-241^78.66%ID^E:5e-90^RecName: Full=Metacaspase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MCA1_ARATH^MCA1_ARATH^Q:567-722,H:228-279^69.23%ID^E:2e-30^RecName: Full=Metacaspase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MCA1_ARATH^MCA1_ARATH^Q:796-1065,H:276-367^64.13%ID^E:2e-30^RecName: Full=Metacaspase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43910_c0_g3_i6.p1","1-534[+]","MCA1_ARATH^MCA1_ARATH^Q:12-175,H:78-241^78.66%ID^E:4e-95^RecName: Full=Metacaspase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00656.19^Peptidase_C14^Caspase domain^14-171^E:5.1e-46",".",".","ENOG410Y41C^Metacaspase","KEGG:ath:AT1G02170","GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0006952^biological_process^defense response`GO:0043068^biological_process^positive regulation of programmed cell death",".",".","."]
["TRINITY_DN45783_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.0507272730516,"0.0180027025757815","0.0237838570286402","TRINITY_DN45783_c0_g2_i2","Y1661_ARATH^Y1661_ARATH^Q:1706-468,H:2-436^44.27%ID^E:1e-108^RecName: Full=Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45783_c0_g2_i2.p1","462-1712[-]","Y1661_ARATH^Y1661_ARATH^Q:3-415,H:2-436^44.27%ID^E:1e-117^RecName: Full=Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^77-182^E:1e-33`PF00954.17^S_locus_glycop^S-locus glycoprotein domain^213-318^E:3.5e-24`PF08276.8^PAN_2^PAN-like domain^332-395^E:8.8e-18`PF14295.3^PAN_4^PAN domain^360-381^E:0.02",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G61610","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen",".","."]
["TRINITY_DN44285_c6_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.05317835040219,"0.00628497967402844","0.00871753613686155","TRINITY_DN44285_c6_g2_i2","M310_ARATH^M310_ARATH^Q:287-568,H:59-152^45.74%ID^E:7e-19^RecName: Full=Uncharacterized mitochondrial protein AtMg00310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44285_c6_g2_i2.p1","598-1608[+]","RNHX1_ARATH^RNHX1_ARATH^Q:12-336,H:220-541^21.36%ID^E:7e-10^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13966.3^zf-RVT^zinc-binding in reverse transcriptase^80-151^E:5.3e-20`PF13456.3^RVT_3^Reverse transcriptase-like^286-335^E:1.7e-07",".",".",".",".","GO:0046872^molecular_function^metal ion binding`GO:0003676^molecular_function^nucleic acid binding`GO:0004523^molecular_function^RNA-DNA hybrid ribonuclease activity",".",".","."]
["TRINITY_DN44134_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.05792399002368,"0.000241569208299966","0.000376509171317547","TRINITY_DN44134_c0_g1_i2","PP325_ARATH^PP325_ARATH^Q:3783-1561,H:80-818^47.58%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:3357-1786,H:324-838^29.14%ID^E:7e-63^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:3015-1477,H:230-811^26.93%ID^E:9e-61^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:2922-1495,H:226-735^27.79%ID^E:1e-55^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:2091-1462,H:223-431^25.71%ID^E:2e-20^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44134_c0_g1_i2.p1","1456-4011[-]","PP325_ARATH^PP325_ARATH^Q:77-817,H:80-818^47.58%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:219-742,H:324-838^29.14%ID^E:3e-64^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:333-845,H:230-811^26.93%ID^E:6e-62^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:364-839,H:226-735^27.79%ID^E:1e-56^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP325_ARATH^PP325_ARATH^Q:641-850,H:223-431^25.71%ID^E:1e-20^RecName: Full=Pentatricopeptide repeat-containing protein At4g19440, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^268-314^E:5.3e-05`PF12854.4^PPR_1^PPR repeat^269-299^E:5.1e-09`PF13041.3^PPR_2^PPR repeat family^270-311^E:1.3e-11`PF01535.17^PPR^PPR repeat^274-303^E:3.6e-06`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^276-418^E:1.9e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^293-351^E:8.4e-12`PF12854.4^PPR_1^PPR repeat^301-334^E:1.2e-11`PF13041.3^PPR_2^PPR repeat family^306-354^E:3.3e-16`PF01535.17^PPR^PPR repeat^308-337^E:1.1e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^329-388^E:2.5e-09`PF01535.17^PPR^PPR repeat^343-373^E:0.0017`PF13812.3^PPR_3^Pentatricopeptide repeat domain^364-420^E:2e-09`PF12854.4^PPR_1^PPR repeat^371-403^E:2.2e-12`PF13041.3^PPR_2^PPR repeat family^375-424^E:9.8e-19`PF01535.17^PPR^PPR repeat^378-407^E:2.8e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^398-454^E:0.0015`PF12854.4^PPR_1^PPR repeat^407-438^E:5.3e-13`PF13041.3^PPR_2^PPR repeat family^410-444^E:8.2e-09`PF01535.17^PPR^PPR repeat^413-442^E:3.6e-07`PF01535.17^PPR^PPR repeat^451-475^E:0.078`PF13041.3^PPR_2^PPR repeat family^480-528^E:5.3e-09`PF01535.17^PPR^PPR repeat^485-512^E:0.002`PF13041.3^PPR_2^PPR repeat family^516-564^E:9.1e-11`PF01535.17^PPR^PPR repeat^518-548^E:0.0013`PF13812.3^PPR_3^Pentatricopeptide repeat domain^538-595^E:1e-10`PF12854.4^PPR_1^PPR repeat^547-579^E:2.8e-09`PF13041.3^PPR_2^PPR repeat family^551-598^E:5.2e-17`PF01535.17^PPR^PPR repeat^553-583^E:3.7e-07`PF12854.4^PPR_1^PPR repeat^581-605^E:9.8e-08`PF13041.3^PPR_2^PPR repeat family^585-634^E:1.7e-11`PF01535.17^PPR^PPR repeat^588-617^E:0.00014`PF13812.3^PPR_3^Pentatricopeptide repeat domain^609-667^E:0.0004`PF13041.3^PPR_2^PPR repeat family^620-666^E:1.3e-09`PF01535.17^PPR^PPR repeat^625-648^E:0.014`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^639-750^E:1.4e-06`PF12854.4^PPR_1^PPR repeat^652-684^E:2.6e-08`PF13041.3^PPR_2^PPR repeat family^655-702^E:1.8e-13`PF01535.17^PPR^PPR repeat^658-688^E:3.8e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^678-737^E:2.3e-11`PF12854.4^PPR_1^PPR repeat^686-719^E:1.1e-05`PF13041.3^PPR_2^PPR repeat family^693-731^E:3.6e-07`PF01535.17^PPR^PPR repeat^694-723^E:4.5e-05`PF12854.4^PPR_1^PPR repeat^721-753^E:1.4e-08`PF13041.3^PPR_2^PPR repeat family^725-774^E:1.1e-16`PF01535.17^PPR^PPR repeat^728-758^E:5.7e-07`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^743-843^E:3.7e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^748-803^E:4.1e-09`PF12854.4^PPR_1^PPR repeat^757-788^E:1.7e-09`PF13041.3^PPR_2^PPR repeat family^763-809^E:2.8e-12`PF01535.17^PPR^PPR repeat^763-793^E:8.9e-07`PF12854.4^PPR_1^PPR repeat^791-823^E:8.7e-09`PF13041.3^PPR_2^PPR repeat family^795-842^E:2.5e-09`PF01535.17^PPR^PPR repeat^798-828^E:1.4e-05",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G19440","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN103393_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.05907882131475,"0.00957282509479169","0.0130349413013765","TRINITY_DN103393_c0_g1_i1","ATL42_ARATH^ATL42_ARATH^Q:1453-326,H:28-421^47.19%ID^E:2e-93^RecName: Full=E3 ubiquitin-protein ligase ATL42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN103393_c0_g1_i1.p1","293-1549[-]","ATL42_ARATH^ATL42_ARATH^Q:9-408,H:4-421^46.12%ID^E:6e-101^RecName: Full=E3 ubiquitin-protein ligase ATL42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^118-161^E:1.5e-13`PF17123.2^zf-RING_11^RING-like zinc finger^118-147^E:3.6e-09`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^119-160^E:1e-09`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^119-160^E:1.2e-07`PF12861.4^zf-ANAPC11^Anaphase-promoting complex subunit 11 RING-H2 finger^119-165^E:3e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^119-158^E:4e-05`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^131-161^E:3.5e-09","sigP:1^18^0.851^YES",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT4G28890`KO:K10664","GO:0016021^cellular_component^integral component of membrane`GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0005680^cellular_component^anaphase-promoting complex",".","."]
["TRINITY_DN39914_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.06136889409819,"0.00139077339009177","0.00204376664918336","TRINITY_DN39914_c0_g1_i1","Y4294_ARATH^Y4294_ARATH^Q:2796-223,H:151-1037^41.51%ID^E:1e-176^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g20940;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4294_ARATH^Y4294_ARATH^Q:3081-1567,H:8-460^30.37%ID^E:3e-34^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g20940;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4294_ARATH^Y4294_ARATH^Q:2799-2290,H:386-573^31.31%ID^E:2e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g20940;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39914_c0_g1_i1.p1","211-3138[-]","Y5020_ARATH^Y5020_ARATH^Q:15-972,H:21-1046^41.55%ID^E:0^RecName: Full=Probable inactive receptor kinase At5g10020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^19-63^E:5.1e-06`PF00560.30^LRR_1^Leucine Rich Repeat^312-342^E:1.3`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^699-907^E:7.8e-25`PF00069.22^Pkinase^Protein kinase domain^699-899^E:2.2e-21","sigP:1^17^0.858^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G10020","GO:0005829^cellular_component^cytosol`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN45350_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.06282509737291,"0.00399531965215685","0.00565073281519606","TRINITY_DN45350_c0_g1_i3","PGLR_ACTDE^PGLR_ACTDE^Q:2495-1155,H:5-455^53.24%ID^E:4e-167^RecName: Full=Polygalacturonase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia",".","TRINITY_DN45350_c0_g1_i3.p1","1401-2501[-]","PGLR_ACTDE^PGLR_ACTDE^Q:3-360,H:5-392^55.98%ID^E:5e-149^RecName: Full=Polygalacturonase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia","PF12708.4^Pectate_lyase_3^Pectate lyase superfamily protein^82-286^E:8.8e-09`PF00295.14^Glyco_hydro_28^Glycosyl hydrolases family 28^108-172^E:2.9e-06`PF00295.14^Glyco_hydro_28^Glycosyl hydrolases family 28^174-355^E:4.1e-66","sigP:1^20^0.712^YES",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0009835^biological_process^fruit ripening","GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN61943_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.06764914608774,"0.0013106980087576","0.00193023790329189","TRINITY_DN61943_c0_g1_i1","LOR5_ARATH^LOR5_ARATH^Q:4-288,H:96-191^58.76%ID^E:1e-26^RecName: Full=Protein LURP-one-related 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN61943_c0_g1_i1.p1","34-390[+]","LOR5_ARATH^LOR5_ARATH^Q:1-85,H:106-191^57.47%ID^E:1e-22^RecName: Full=Protein LURP-one-related 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04525.9^LOR^LURP-one-related^10-80^E:6.8e-16",".",".","ENOG410YKW3^LURP-one-related 12-like","KEGG:ath:AT1G80120",".",".",".","."]
["TRINITY_DN45001_c2_g8","leaves S. abrotanoides","roots S. abrotanoides",-1.06795844839788,"0.004058024306047","0.00573586329285526","TRINITY_DN45001_c2_g8_i1","SHR_ARATH^SHR_ARATH^Q:1506-241,H:52-528^59.41%ID^E:0^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45001_c2_g8_i1.p1","232-1593[-]","SHR_ARATH^SHR_ARATH^Q:1-453,H:1-530^56.87%ID^E:0^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03514.11^GRAS^GRAS domain family^76-452^E:1.5e-105",".",".","ENOG41116YR^Transcription factor","KEGG:ath:AT4G37650","GO:0005769^cellular_component^early endosome`GO:0005770^cellular_component^late endosome`GO:0005634^cellular_component^nucleus`GO:0055037^cellular_component^recycling endosome`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008356^biological_process^asymmetric cell division`GO:0055072^biological_process^iron ion homeostasis`GO:0048366^biological_process^leaf development`GO:0045930^biological_process^negative regulation of mitotic cell cycle`GO:0009956^biological_process^radial pattern formation`GO:0032350^biological_process^regulation of hormone metabolic process`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47344_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.07292753496834,"0.00350136890336236","0.0049793811831094","TRINITY_DN47344_c1_g1_i10","R1A6_SOLDE^R1A6_SOLDE^Q:518-3,H:642-810^45.66%ID^E:2e-39^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47344_c1_g1_i10.p1","3-518[-]","R1A6_SOLDE^R1A6_SOLDE^Q:1-172,H:642-810^45.66%ID^E:2e-39^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^2-169^E:8.6e-43",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47394_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.07638162562331,"0.0138566533651398","0.0185579936954721","TRINITY_DN47394_c1_g3_i1","Y3471_ARATH^Y3471_ARATH^Q:290-3,H:37-131^42.71%ID^E:3e-19^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47394_c1_g3_i1.p1","3-371[-]","Y3471_ARATH^Y3471_ARATH^Q:28-123,H:37-131^42.71%ID^E:4e-20^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^30-69^E:1.3e-12`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^96-109^E:4900`PF13516.3^LRR_6^Leucine Rich repeat^96-111^E:0.14`PF00560.30^LRR_1^Leucine Rich Repeat^99-120^E:0.27","sigP:1^25^0.649^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47110","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44987_c3_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.07775241305867,"0.00797307185160202","0.0109442391354162","TRINITY_DN44987_c3_g3_i2","R1C3_SOLDE^R1C3_SOLDE^Q:6-218,H:660-730^57.75%ID^E:1e-15^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1C3_SOLDE^R1C3_SOLDE^Q:263-1516,H:782-1199^25.88%ID^E:2e-08^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44987_c3_g3_i2.p1","725-1522[+]","R1A6_SOLDE^R1A6_SOLDE^Q:5-264,H:956-1215^29.75%ID^E:3e-12^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46028_c2_g11","leaves S. abrotanoides","roots S. abrotanoides",-1.07898715406575,"0.021605358114684","0.0282963229985838","TRINITY_DN46028_c2_g11_i1","BZP43_ARATH^BZP43_ARATH^Q:648-190,H:1-154^51.57%ID^E:2e-39^RecName: Full=Basic leucine zipper 43 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46028_c2_g11_i1.p1","157-648[-]","BZP43_ARATH^BZP43_ARATH^Q:1-153,H:1-154^51.57%ID^E:2e-40^RecName: Full=Basic leucine zipper 43 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07716.12^bZIP_2^Basic region leucine zipper^70-115^E:1.3e-06`PF00170.18^bZIP_1^bZIP transcription factor^71-129^E:3.7e-12",".",".","ENOG410YWTI^Transcription factor","KEGG:ath:AT5G38800","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43735_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.08102444528627,"0.00640598702536154","0.00887728455037828","TRINITY_DN43735_c0_g1_i2","Y1668_ARATH^Y1668_ARATH^Q:2286-235,H:16-681^47.29%ID^E:0^RecName: Full=Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43735_c0_g1_i2.p1","214-2337[-]","Y1668_ARATH^Y1668_ARATH^Q:1-701,H:1-681^47.43%ID^E:0^RecName: Full=Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^25-64^E:5.1e-13`PF00560.30^LRR_1^Leucine Rich Repeat^93-111^E:0.66`PF13516.3^LRR_6^Leucine Rich repeat^162-177^E:0.87`PF00069.22^Pkinase^Protein kinase domain^414-694^E:1.7e-33`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^414-696^E:3.6e-27","sigP:1^17^0.744^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G66830","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46534_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",-1.09375242820063,"0.00365388546114878","0.00518658159673615","TRINITY_DN46534_c0_g6_i5","TBL16_ARATH^TBL16_ARATH^Q:1654-512,H:171-551^60.21%ID^E:2e-175^RecName: Full=Protein trichome birefringence-like 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46534_c0_g6_i5.p1","509-1609[-]","TBL16_ARATH^TBL16_ARATH^Q:5-366,H:190-551^61.88%ID^E:5e-178^RecName: Full=Protein trichome birefringence-like 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14416.3^PMR5N^PMR5 N terminal Domain^26-79^E:1.2e-14`PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^80-365^E:1.1e-79",".",".","ENOG4110MRA^expressed protein","KEGG:ath:AT5G20680","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0016413^molecular_function^O-acetyltransferase activity`GO:0071554^biological_process^cell wall organization or biogenesis",".",".","."]
["TRINITY_DN44340_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.09660957548656,"0.00226619093362677","0.00327225829653564","TRINITY_DN44340_c1_g3_i5","SKA1_ARATH^SKA1_ARATH^Q:719-321,H:1-136^57.35%ID^E:3e-41^RecName: Full=Spindle and kinetochore-associated protein 1 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44340_c1_g3_i5.p1","165-815[-]","SKA1_ARATH^SKA1_ARATH^Q:33-165,H:1-136^57.35%ID^E:5e-42^RecName: Full=Spindle and kinetochore-associated protein 1 homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07160.9^DUF1395^Protein of unknown function (DUF1395)^52-156^E:1.3e-19",".",".","ENOG4111IBI^Spindle and kinetochore associated complex subunit 1","KEGG:ath:AT3G60660",".","GO:0008017^molecular_function^microtubule binding`GO:0007059^biological_process^chromosome segregation`GO:0051301^biological_process^cell division",".","."]
["TRINITY_DN35997_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.09908021605685,"0.00324463210180217","0.00462531942545936","TRINITY_DN35997_c0_g1_i2","PUB26_ARATH^PUB26_ARATH^Q:428-646,H:12-84^61.64%ID^E:3e-23^RecName: Full=U-box domain-containing protein 26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35997_c0_g1_i2.p1","413-1465[+]","PUB25_ARATH^PUB25_ARATH^Q:6-335,H:12-384^28.91%ID^E:2e-31^RecName: Full=U-box domain-containing protein 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^8-78^E:1.5e-19`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^14-50^E:0.00012",".",".","ENOG410YB5U^Ubox domain-containing protein","KEGG:ath:AT3G19380","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010200^biological_process^response to chitin","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN42160_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.09917627889451,"0.00104898719369366","0.00155772322803218","TRINITY_DN42160_c1_g1_i3","VAB_ARATH^VAB_ARATH^Q:160-1164,H:161-489^63.69%ID^E:1e-73^RecName: Full=VAN3-binding protein {ECO:0000303|PubMed:19363154};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42160_c1_g1_i3.p1","433-1176[+]","VAB_ARATH^VAB_ARATH^Q:1-244,H:251-489^66.12%ID^E:1e-88^RecName: Full=VAN3-binding protein {ECO:0000303|PubMed:19363154};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05703.8^Auxin_canalis^Auxin canalisation^1-84^E:2.2e-39`PF08458.7^PH_2^Plant pleckstrin homology-like region^133-238^E:8.4e-40",".",".","ENOG4111DWT^Plant pleckstrin homology-like region","KEGG:ath:AT3G63300","GO:0009734^biological_process^auxin-activated signaling pathway`GO:0010305^biological_process^leaf vascular tissue pattern formation`GO:0010087^biological_process^phloem or xylem histogenesis`GO:0009733^biological_process^response to auxin",".",".","."]
["TRINITY_DN39088_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.10315219461765,"0.00183018246179512","0.00266446309486607","TRINITY_DN39088_c0_g1_i3",".",".","TRINITY_DN39088_c0_g1_i3.p1","19-438[-]","HIP26_ARATH^HIP26_ARATH^Q:33-99,H:30-95^44.78%ID^E:2e-09^RecName: Full=Heavy metal-associated isoprenylated plant protein 26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00403.23^HMA^Heavy-metal-associated domain^33-86^E:3.1e-12",".",".","COG2608^heavy metal transport detoxification protein","KEGG:ath:AT4G38580","GO:0005737^cellular_component^cytoplasm`GO:0031965^cellular_component^nuclear membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0046914^molecular_function^transition metal ion binding`GO:0046916^biological_process^cellular transition metal ion homeostasis`GO:0010286^biological_process^heat acclimation`GO:0030001^biological_process^metal ion transport","GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport",".","."]
["TRINITY_DN47246_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.10663246908964,"0.00656165236314428","0.00908334900459936","TRINITY_DN47246_c0_g2_i1","POLX_TOBAC^POLX_TOBAC^Q:52-354,H:520-621^44.12%ID^E:1e-28^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:354-605,H:622-706^32.94%ID^E:1e-28^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:1098-1301,H:895-964^55.71%ID^E:9e-26^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:842-1105,H:809-896^37.5%ID^E:9e-26^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47246_c0_g2_i1.p2","803-1129[+]","M820_ARATH^M820_ARATH^Q:8-101,H:30-110^36.17%ID^E:1e-14^RecName: Full=Uncharacterized mitochondrial protein AtMg00820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07727.11^RVT_2^Reverse transcriptase (RNA-dependent DNA polymerase)^45-103^E:1.1e-16",".",".","COG2801^Retrotransposon protein","KEGG:ath:ArthMp071","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN41610_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.10831009520406,"0.000556894858186141","0.000844985421494492","TRINITY_DN41610_c0_g1_i2","CXE11_ARATH^CXE11_ARATH^Q:1755-385,H:1-460^68.74%ID^E:0^RecName: Full=Probable carboxylesterase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41610_c0_g1_i2.p1","382-1755[-]","CXE11_ARATH^CXE11_ARATH^Q:1-457,H:1-460^70.36%ID^E:0^RecName: Full=Probable carboxylesterase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00135.25^COesterase^Carboxylesterase family^162-207^E:2.2e-06`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^166-422^E:2.7e-64",".",".","COG0657^alpha beta hydrolase fold-3 domain protein","KEGG:ath:AT3G27320","GO:0052689^molecular_function^carboxylic ester hydrolase activity","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN40463_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.11034388288542,"0.0012164639848979","0.00179648545456042","TRINITY_DN40463_c0_g1_i6","PRI2_ARATH^PRI2_ARATH^Q:194-1534,H:1-449^70.89%ID^E:0^RecName: Full=Probable DNA primase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40463_c0_g1_i6.p1","194-1552[+]","PRI2_ARATH^PRI2_ARATH^Q:1-447,H:1-449^70.89%ID^E:0^RecName: Full=Probable DNA primase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04104.11^DNA_primase_lrg^Eukaryotic and archaeal DNA primase, large subunit^171-436^E:1e-94",".",".",".",".","GO:1990077^cellular_component^primosome complex`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0003677^molecular_function^DNA binding`GO:0003896^molecular_function^DNA primase activity`GO:0046872^molecular_function^metal ion binding","GO:0003896^molecular_function^DNA primase activity`GO:0006269^biological_process^DNA replication, synthesis of RNA primer",".","."]
["TRINITY_DN39493_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.11929091047935,"0.00775873429230726","0.010662856769197","TRINITY_DN39493_c2_g1_i1","PUB24_ARATH^PUB24_ARATH^Q:92-1258,H:6-441^36.96%ID^E:6e-73^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39493_c2_g1_i1.p1","89-1282[+]","PUB24_ARATH^PUB24_ARATH^Q:2-394,H:6-445^38.88%ID^E:9e-92^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^6-77^E:2.9e-19",".",".","ENOG410Y8GW^Ubiquitin-protein ligase","KEGG:ath:AT3G11840","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0006952^biological_process^defense response","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN44974_c5_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.12527148951323,"0.000561577271149988","0.00085180692493769","TRINITY_DN44974_c5_g3_i1","ERF03_ARATH^ERF03_ARATH^Q:174-641,H:1-176^57.95%ID^E:9e-44^RecName: Full=Ethylene-responsive transcription factor ERF003;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44974_c5_g3_i1.p1","174-662[+]","ERF03_ARATH^ERF03_ARATH^Q:1-156,H:1-176^58.52%ID^E:6e-62^RecName: Full=Ethylene-responsive transcription factor ERF003;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^7-55^E:3.2e-11",".",".","ENOG4111RRZ^Transcription factor","KEGG:ath:AT5G25190","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46953_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.12572457535319,"0.000197766367398539","0.000310251299826652","TRINITY_DN46953_c4_g1_i1","AIR3_ARATH^AIR3_ARATH^Q:88-2307,H:31-771^66.17%ID^E:0^RecName: Full=Subtilisin-like protease SBT5.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46953_c4_g1_i1.p1","1096-2316[+]","SBT54_ARATH^SBT54_ARATH^Q:3-404,H:375-775^65.02%ID^E:1e-178^RecName: Full=Subtilisin-like protease SBT5.4 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02225.19^PA^PA domain^38-111^E:2.7e-12`PF00082.19^Peptidase_S8^Subtilase family^129-253^E:3.8e-23",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT5G59810","GO:0005618^cellular_component^cell wall`GO:0005783^cellular_component^endoplasmic reticulum`GO:0005886^cellular_component^plasma membrane`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0010074^biological_process^maintenance of meristem identity`GO:0040008^biological_process^regulation of growth","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46070_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.12797403748365,"0.000929915798710673","0.00138752639037131","TRINITY_DN46070_c1_g3_i5","ARAE1_ARATH^ARAE1_ARATH^Q:1541-282,H:21-417^74.52%ID^E:0^RecName: Full=UDP-arabinose 4-epimerase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46070_c1_g3_i5.p1","534-1571[-]","ARAE1_ARATH^ARAE1_ARATH^Q:11-334,H:21-344^79.01%ID^E:0^RecName: Full=UDP-arabinose 4-epimerase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04321.14^RmlD_sub_bind^RmlD substrate binding domain^62-240^E:1.1e-11`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^63-324^E:2.3e-49`PF02719.12^Polysacc_synt_2^Polysaccharide biosynthesis protein^63-243^E:3.9e-14`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^64-304^E:1.7e-45`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^64-223^E:7.4e-13`PF07993.9^NAD_binding_4^Male sterility protein^65-248^E:3.2e-06`PF13460.3^NAD_binding_10^NAD(P)H-binding^67-249^E:4.8e-09",".",".","COG1087^udp-glucose 4-epimerase","KEGG:ath:AT1G30620`KO:K12448","GO:0005794^cellular_component^Golgi apparatus`GO:0032580^cellular_component^Golgi cisterna membrane`GO:0016021^cellular_component^integral component of membrane`GO:0050373^molecular_function^UDP-arabinose 4-epimerase activity`GO:0003978^molecular_function^UDP-glucose 4-epimerase activity`GO:0019567^biological_process^arabinose biosynthetic process`GO:0045227^biological_process^capsule polysaccharide biosynthetic process`GO:0006012^biological_process^galactose metabolic process`GO:0009832^biological_process^plant-type cell wall biogenesis`GO:0033358^biological_process^UDP-L-arabinose biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47196_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.12891248191459,"0.00037428618679251","0.000574757663354604","TRINITY_DN47196_c3_g1_i1","RP8L3_ARATH^RP8L3_ARATH^Q:23-751,H:373-615^27.1%ID^E:2e-14^RecName: Full=Disease resistance RPP8-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47196_c3_g1_i1.p1","2-751[+]","RP8L3_ARATH^RP8L3_ARATH^Q:8-250,H:373-615^27.1%ID^E:2e-14^RecName: Full=Disease resistance RPP8-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^7-75^E:2e-12",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT5G35450","GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN42655_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.13003825973893,"0.00579804546165548","0.00807075431458478","TRINITY_DN42655_c0_g1_i3","C90D1_ARATH^C90D1_ARATH^Q:3-986,H:161-490^64.65%ID^E:2e-140^RecName: Full=3-epi-6-deoxocathasterone 23-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42655_c0_g1_i3.p1","3-1001[+]","C90D1_ARATH^C90D1_ARATH^Q:1-328,H:161-490^64.65%ID^E:5e-158^RecName: Full=3-epi-6-deoxocathasterone 23-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^57-310^E:2.4e-43",".",".","COG2124^Cytochrome p450","KEGG:ath:AT3G13730`KO:K12638","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0010268^biological_process^brassinosteroid homeostasis`GO:0048366^biological_process^leaf development`GO:0048441^biological_process^petal development`GO:0048443^biological_process^stamen development`GO:0016125^biological_process^sterol metabolic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44244_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.13242692419213,"0.018028147426745","0.0238151749233711","TRINITY_DN44244_c0_g1_i1","FAN1_ORYSJ^FAN1_ORYSJ^Q:23-1111,H:1-388^30.89%ID^E:1e-38^RecName: Full=Fanconi-associated nuclease 1 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44244_c0_g1_i1.p1","2-1114[+]","FAN1_ORYSJ^FAN1_ORYSJ^Q:8-370,H:1-388^32.17%ID^E:8e-42^RecName: Full=Fanconi-associated nuclease 1 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08797.8^HIRAN^HIRAN domain^211-290^E:3.9e-14",".",".","ENOG410XRN3^FANCD2 FANCI-associated nuclease 1","KEGG:osa:4340269`KO:K15363","GO:0003677^molecular_function^DNA binding`GO:0016818^molecular_function^hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides`GO:0004528^molecular_function^phosphodiesterase I activity`GO:0008270^molecular_function^zinc ion binding`GO:0006281^biological_process^DNA repair","GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding`GO:0016818^molecular_function^hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides",".","."]
["TRINITY_DN45441_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.13458131016017,"0.00124086916316451","0.00183055275805052","TRINITY_DN45441_c0_g1_i7","ALB33_ARATH^ALB33_ARATH^Q:1494-199,H:120-550^50.46%ID^E:9e-136^RecName: Full=ALBINO3-like protein 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45441_c0_g1_i7.p1","157-1803[-]","ALB33_ARATH^ALB33_ARATH^Q:104-535,H:120-550^50.46%ID^E:7e-149^RecName: Full=ALBINO3-like protein 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02096.17^60KD_IMP^60Kd inner membrane protein^122-321^E:6.5e-08",".",".","COG0706^Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins","KEGG:ath:AT3G44370","GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion`GO:0051205^biological_process^protein insertion into membrane","GO:0051205^biological_process^protein insertion into membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN13302_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.13727751699713,"0.00410282823573375","0.00579590103070043","TRINITY_DN13302_c0_g1_i1","MAKR2_ARATH^MAKR2_ARATH^Q:1560-355,H:1-407^35.68%ID^E:1e-34^RecName: Full=Probable membrane-associated kinase regulator 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN13302_c0_g1_i1.p1","274-1560[-]","MAKR2_ARATH^MAKR2_ARATH^Q:1-402,H:1-407^37.73%ID^E:8e-50^RecName: Full=Probable membrane-associated kinase regulator 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YGY6^membrane-associated kinase regulator 2-like","KEGG:ath:AT1G64080","GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN44519_c3_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.13857960849974,"0.00509150849656305","0.00712603001080429","TRINITY_DN44519_c3_g3_i1","WRKY6_ARATH^WRKY6_ARATH^Q:1214-285,H:84-434^46.74%ID^E:5e-63^RecName: Full=WRKY transcription factor 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44519_c3_g3_i1.p1","21-1301[-]","WRK42_ARATH^WRK42_ARATH^Q:80-401,H:115-503^45.41%ID^E:3e-82^RecName: Full=Probable WRKY transcription factor 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^230-287^E:1.2e-26",".",".","ENOG410YDVM^Transcription factor","KEGG:ath:AT4G04450","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45001_c2_g10","leaves S. abrotanoides","roots S. abrotanoides",-1.14044241040421,"0.0146765284140516","0.0195899282262723","TRINITY_DN45001_c2_g10_i1","SHR_ARATH^SHR_ARATH^Q:1623-187,H:1-531^56.82%ID^E:0^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45001_c2_g10_i1.p2","184-1623[-]","SHR_ARATH^SHR_ARATH^Q:1-479,H:1-531^56.45%ID^E:0^RecName: Full=Protein SHORT-ROOT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03514.11^GRAS^GRAS domain family^96-477^E:4e-98",".",".","ENOG41116YR^Transcription factor","KEGG:ath:AT4G37650","GO:0005769^cellular_component^early endosome`GO:0005770^cellular_component^late endosome`GO:0005634^cellular_component^nucleus`GO:0055037^cellular_component^recycling endosome`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008356^biological_process^asymmetric cell division`GO:0055072^biological_process^iron ion homeostasis`GO:0048366^biological_process^leaf development`GO:0045930^biological_process^negative regulation of mitotic cell cycle`GO:0009956^biological_process^radial pattern formation`GO:0032350^biological_process^regulation of hormone metabolic process`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46057_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.14536490906846,"0.020120590093642","0.0264326481737766","TRINITY_DN46057_c0_g1_i1","AX15A_SOYBN^AX15A_SOYBN^Q:491-300,H:17-81^47.69%ID^E:4e-13^RecName: Full=Auxin-induced protein 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46057_c0_g1_i1.p1","144-641[-]","AX15A_SOYBN^AX15A_SOYBN^Q:51-114,H:17-81^47.69%ID^E:2e-13^RecName: Full=Auxin-induced protein 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF02519.11^Auxin_inducible^Auxin responsive protein^27-114^E:2.6e-24",".",".","ENOG410Z28U^auxin-induced protein",".","GO:0009734^biological_process^auxin-activated signaling pathway","GO:0009733^biological_process^response to auxin",".","."]
["TRINITY_DN44477_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.15200274743995,"0.00496888769258289","0.00696081504507071","TRINITY_DN44477_c0_g2_i2","RGA4_SOLBU^RGA4_SOLBU^Q:9-458,H:474-617^35.71%ID^E:3e-11^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44477_c0_g2_i2.p1","3-497[+]","RGA4_SOLBU^RGA4_SOLBU^Q:3-165,H:474-630^36.14%ID^E:1e-14^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN43701_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.15302514722917,"0.00106667697291785","0.00158244747802631","TRINITY_DN43701_c0_g1_i3","HBL2_SOLLC^HBL2_SOLLC^Q:4012-3548,H:2-156^78.71%ID^E:1e-75^RecName: Full=Non-symbiotic hemoglobin 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN43701_c0_g1_i3.p1","1484-3070[+]","RLP12_ARATH^RLP12_ARATH^Q:46-516,H:379-828^32.16%ID^E:3e-54^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:69-445,H:112-457^30.15%ID^E:6e-34^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:19-431,H:159-558^27.12%ID^E:1e-31^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:161-432,H:85-321^30.43%ID^E:2e-22^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:20-236,H:542-762^25.11%ID^E:5e-11^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:340-457,H:109-227^34.45%ID^E:3e-08^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^68-82^E:0.99`PF13855.3^LRR_8^Leucine rich repeat^232-291^E:1.3e-06`PF00560.30^LRR_1^Leucine Rich Repeat^281-302^E:0.65`PF13516.3^LRR_6^Leucine Rich repeat^341-356^E:1.2`PF13855.3^LRR_8^Leucine rich repeat^366-425^E:1.2e-06`PF00560.30^LRR_1^Leucine Rich Repeat^391-412^E:1.9",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G71400","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46854_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.15326942706621,"0.00311864547418629","0.00445383691559629","TRINITY_DN46854_c4_g2_i3","WRKY9_ARATH^WRKY9_ARATH^Q:1137-403,H:97-360^46.01%ID^E:1e-62^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46854_c4_g2_i3.p1","79-1275[-]","WRKY9_ARATH^WRKY9_ARATH^Q:47-291,H:97-360^46.01%ID^E:7e-64^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^177-235^E:6.7e-27",".",".","ENOG410Y9PF^WRKY transcription factor","KEGG:ath:AT1G68150","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46450_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.15866180362783,"0.0020464300052177","0.00296792504808412","TRINITY_DN46450_c3_g4_i2","R1B8_SOLDE^R1B8_SOLDE^Q:3-1229,H:611-1018^31.11%ID^E:2e-49^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46450_c3_g4_i2.p1","3-1259[+]","R1B8_SOLDE^R1B8_SOLDE^Q:1-409,H:611-1018^31.11%ID^E:2e-49^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^4-130^E:4.5e-29",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN40017_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.16270916540699,"0.000367634262189647","0.000564859667912641","TRINITY_DN40017_c0_g1_i1","CND2_ARATH^CND2_ARATH^Q:438-1769,H:211-670^51.8%ID^E:2e-130^RecName: Full=Condensin complex subunit 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40017_c0_g1_i1.p1","636-1787[+]","CND2_ARATH^CND2_ARATH^Q:1-378,H:277-670^48.39%ID^E:3e-112^RecName: Full=Condensin complex subunit 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05786.11^Cnd2^Condensin complex subunit 2^25-235^E:6.2e-21`PF05786.11^Cnd2^Condensin complex subunit 2^265-376^E:1.1e-28",".",".","COG5229^Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity)","KEGG:ath:AT2G32590`KO:K06676","GO:0000793^cellular_component^condensed chromosome`GO:0000796^cellular_component^condensin complex`GO:0005737^cellular_component^cytoplasm`GO:0051301^biological_process^cell division`GO:0007076^biological_process^mitotic chromosome condensation","GO:0007076^biological_process^mitotic chromosome condensation`GO:0000796^cellular_component^condensin complex",".","."]
["TRINITY_DN46705_c0_g7","leaves S. abrotanoides","roots S. abrotanoides",-1.16879866501266,"0.00115826005699737","0.00171302377211769","TRINITY_DN46705_c0_g7_i2","CXE17_ARATH^CXE17_ARATH^Q:941-345,H:97-308^42.06%ID^E:2e-39^RecName: Full=Probable carboxylesterase 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46705_c0_g7_i2.p1","234-1130[-]","CXE17_ARATH^CXE17_ARATH^Q:3-296,H:28-342^36.68%ID^E:9e-56^RecName: Full=Probable carboxylesterase 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10340.6^DUF2424^Protein of unknown function (DUF2424)^55-184^E:4.8e-08`PF00135.25^COesterase^Carboxylesterase family^55-154^E:5.6e-06`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^62-275^E:1.8e-52",".",".","COG0657^alpha beta hydrolase fold-3 domain protein","KEGG:ath:AT5G16080","GO:0052689^molecular_function^carboxylic ester hydrolase activity","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN30566_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.16989589621557,"0.00670848399913014","0.00927488727396651","TRINITY_DN30566_c0_g1_i1","PSF2_ARATH^PSF2_ARATH^Q:1180-548,H:1-210^64.62%ID^E:1e-76^RecName: Full=DNA replication complex GINS protein PSF2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN30566_c0_g1_i1.p1","545-1180[-]","PSF2_ARATH^PSF2_ARATH^Q:1-211,H:1-210^64.62%ID^E:6e-92^RecName: Full=DNA replication complex GINS protein PSF2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05916.8^Sld5^GINS complex protein^54-162^E:4.3e-21",".",".","COG5093^DNA replication complex GINS protein psf2","KEGG:ath:AT3G12530`KO:K10733","GO:0000811^cellular_component^GINS complex`GO:0031298^cellular_component^replication fork protection complex`GO:0032508^biological_process^DNA duplex unwinding`GO:0000727^biological_process^double-strand break repair via break-induced replication`GO:1902975^biological_process^mitotic DNA replication initiation",".",".","."]
["TRINITY_DN43706_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.17690596446058,"0.00848869019544895","0.011618804539737","TRINITY_DN43706_c1_g3_i2","CNBL3_ORYSJ^CNBL3_ORYSJ^Q:2-466,H:63-217^86.45%ID^E:1e-92^RecName: Full=Calcineurin B-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43706_c1_g3_i2.p1","2-439[+]","CNBL3_ORYSJ^CNBL3_ORYSJ^Q:1-145,H:63-207^91.72%ID^E:6e-93^RecName: Full=Calcineurin B-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF13833.3^EF-hand_8^EF-hand domain pair^1-47^E:0.00012`PF13202.3^EF-hand_5^EF hand^25-46^E:0.0015`PF13833.3^EF-hand_8^EF-hand domain pair^74-129^E:0.026`PF00036.29^EF-hand_1^EF hand^105-131^E:6.5e-07`PF13202.3^EF-hand_5^EF hand^105-129^E:5.2e-08",".",".","COG5126^Calcium-binding protein","KEGG:osa:4333502`KO:K06268","GO:0005509^molecular_function^calcium ion binding","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN47283_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",-1.17747076573459,"0.00492573420123957","0.00690354077349489","TRINITY_DN47283_c0_g6_i1","LIN2_LOTJA^LIN2_LOTJA^Q:986-6,H:413-808^37.66%ID^E:4e-59^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-2 {ECO:0000303|PubMed:19776163};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN47283_c0_g6_i1.p1","3-926[-]","LIN_MEDTR^LIN_MEDTR^Q:55-307,H:504-811^41.35%ID^E:3e-62^RecName: Full=Putative E3 ubiquitin-protein ligase LIN;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF04564.12^U-box^U-box domain^63-134^E:1.4e-15",".",".",".",".","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0009877^biological_process^nodulation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN40907_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.18289142232157,"0.000963330722457729","0.00143472670363646","TRINITY_DN40907_c0_g2_i1","ZDHC3_ARATH^ZDHC3_ARATH^Q:369-2159,H:1-513^54.5%ID^E:0^RecName: Full=Protein S-acyltransferase 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40907_c0_g2_i1.p1","369-2303[+]","ZDHC3_ARATH^ZDHC3_ARATH^Q:1-644,H:1-565^53.75%ID^E:0^RecName: Full=Protein S-acyltransferase 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01529.17^zf-DHHC^DHHC palmitoyltransferase^151-288^E:9.1e-34",".",".","COG5273^Zinc finger, DHHC-type containing","KEGG:ath:AT2G33640`KO:K18932","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0019706^molecular_function^protein-cysteine S-palmitoyltransferase activity`GO:0008270^molecular_function^zinc ion binding","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN47716_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.18469034799205,"0.000366600257681321","0.000563334167008284","TRINITY_DN47716_c1_g3_i5","POLX_TOBAC^POLX_TOBAC^Q:2-970,H:125-445^29.82%ID^E:3e-34^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47716_c1_g3_i5.p1","2-970[+]","POLX_TOBAC^POLX_TOBAC^Q:1-323,H:125-445^30.99%ID^E:1e-38^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00098.20^zf-CCHC^Zinc knuckle^116-132^E:5.8e-05`PF13976.3^gag_pre-integrs^GAG-pre-integrase domain^277-321^E:8.6e-07",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration","GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN46144_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.18527550284299,"0.00719835876416366","0.00992510866259283","TRINITY_DN46144_c3_g2_i1","R1C3_SOLDE^R1C3_SOLDE^Q:525-1265,H:510-757^31.03%ID^E:1e-17^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46144_c3_g2_i1.p1","3-1268[+]","R1C3_SOLDE^R1C3_SOLDE^Q:175-421,H:510-757^31.42%ID^E:1e-22^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^181-421^E:8.1e-41",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45760_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.19287764030954,"0.00392498973206467","0.0055555667235153","TRINITY_DN45760_c3_g1_i4","C2GR1_ARATH^C2GR1_ARATH^Q:1938-3749,H:476-1013^59.11%ID^E:0^RecName: Full=C2 and GRAM domain-containing protein At1g03370;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`C2GR1_ARATH^C2GR1_ARATH^Q:611-1921,H:1-430^52.54%ID^E:2e-139^RecName: Full=C2 and GRAM domain-containing protein At1g03370;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45760_c3_g1_i4.p1","2058-3755[+]","C2GR1_ARATH^C2GR1_ARATH^Q:1-564,H:516-1013^58.87%ID^E:0^RecName: Full=C2 and GRAM domain-containing protein At1g03370;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^21-123^E:4.8e-14`PF02893.17^GRAM^GRAM domain^175-239^E:1.7e-16`PF16016.2^DUF4782^Domain of unknown function (DUF4782)^415-544^E:4.9e-18",".",".","ENOG410XS5D^Unc-13 homolog","KEGG:ath:AT1G03370","GO:0016021^cellular_component^integral component of membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47522_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.19496880427525,"0.000100121054155652","0.000160347106441937","TRINITY_DN47522_c1_g1_i9","HSP22_ARATH^HSP22_ARATH^Q:234-548,H:75-192^27.97%ID^E:4e-10^RecName: Full=22.0 kDa heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47522_c1_g1_i9.p1","171-761[+]","HSP22_ARATH^HSP22_ARATH^Q:22-126,H:75-192^27.97%ID^E:1e-10^RecName: Full=22.0 kDa heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00011.18^HSP20^Hsp20/alpha crystallin family^23-113^E:8.5e-08",".",".","COG0071^response to heat","KEGG:ath:AT4G10250`KO:K13993","GO:0005783^cellular_component^endoplasmic reticulum`GO:0009408^biological_process^response to heat",".",".","."]
["TRINITY_DN47577_c5_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.20097027096393,"0.00120970509507747","0.00178669658136496","TRINITY_DN47577_c5_g2_i3","FLS2_ARATH^FLS2_ARATH^Q:3-1136,H:95-493^37.47%ID^E:2e-61^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:9-1136,H:334-760^34.42%ID^E:4e-55^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:12-1148,H:242-642^32.43%ID^E:4e-47^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:114-1148,H:84-473^34.26%ID^E:4e-47^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:315-1190,H:77-360^38.1%ID^E:1e-41^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:12-863,H:457-765^34.62%ID^E:2e-41^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:3-713,H:526-764^35.56%ID^E:8e-30^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47577_c5_g2_i3.p1","3-1190[+]","FLS2_ARATH^FLS2_ARATH^Q:1-378,H:95-493^37.47%ID^E:2e-61^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:3-378,H:334-760^34.42%ID^E:4e-55^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:4-382,H:242-642^32.43%ID^E:4e-47^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:38-382,H:84-473^34.26%ID^E:4e-47^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:105-396,H:77-360^38.1%ID^E:1e-41^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:4-287,H:457-765^34.62%ID^E:2e-41^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1-237,H:526-764^35.56%ID^E:7e-30^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^2-16^E:0.99`PF13855.3^LRR_8^Leucine rich repeat^4-62^E:8.9e-08`PF00560.30^LRR_1^Leucine Rich Repeat^4-25^E:1.4`PF00560.30^LRR_1^Leucine Rich Repeat^51-72^E:0.67",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G46330`KO:K13420","GO:0005768^cellular_component^endosome`GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004675^molecular_function^transmembrane receptor protein serine/threonine kinase activity`GO:0052544^biological_process^defense response by callose deposition in cell wall`GO:0042742^biological_process^defense response to bacterium`GO:0016045^biological_process^detection of bacterium`GO:0006898^biological_process^receptor-mediated endocytosis`GO:0010359^biological_process^regulation of anion channel activity`GO:0007178^biological_process^transmembrane receptor protein serine/threonine kinase signaling pathway","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44699_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.20201077642219,"0.00241054060636514","0.00347391365844412","TRINITY_DN44699_c2_g3_i1","YLS9_ARATH^YLS9_ARATH^Q:438-953,H:13-194^30%ID^E:2e-10^RecName: Full=Protein YLS9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44699_c2_g3_i1.p1","336-1049[+]","YLS9_ARATH^YLS9_ARATH^Q:35-206,H:13-194^30%ID^E:1e-16^RecName: Full=Protein YLS9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03168.10^LEA_2^Late embryogenesis abundant protein^110-207^E:3.5e-12",".",".","ENOG410YGQV^harpin-induced protein 1 domain containing protein, expressed","KEGG:ath:AT2G35980","GO:0046658^cellular_component^anchored component of plasma membrane`GO:0009507^cellular_component^chloroplast`GO:0009506^cellular_component^plasmodesma`GO:0004871^molecular_function^signal transducer activity`GO:0051607^biological_process^defense response to virus`GO:0010150^biological_process^leaf senescence`GO:0051707^biological_process^response to other organism`GO:0007165^biological_process^signal transduction",".",".","."]
["TRINITY_DN22634_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.20413193037748,"0.00421209316778592","0.00594320333969608","TRINITY_DN22634_c0_g1_i1","LBD1_ARATH^LBD1_ARATH^Q:794-315,H:29-189^68.9%ID^E:1e-62^RecName: Full=LOB domain-containing protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22634_c0_g1_i1.p1","312-923[-]","LBD1_ARATH^LBD1_ARATH^Q:44-203,H:29-189^68.9%ID^E:3e-73^RecName: Full=LOB domain-containing protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03195.11^DUF260^Protein of unknown function DUF260^48-145^E:5.7e-43",".",".","ENOG410YHTF^lob domain-containing protein","KEGG:ath:AT1G07900","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN47732_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.20439589681436,"0.000104057825506925","0.000166457263456954","TRINITY_DN47732_c2_g1_i1","RPS5_ARATH^RPS5_ARATH^Q:4-426,H:336-465^35.46%ID^E:2e-18^RecName: Full=Disease resistance protein RPS5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47732_c2_g1_i1.p1","37-450[+]","RPS5_ARATH^RPS5_ARATH^Q:2-130,H:348-465^37.21%ID^E:1e-16^RecName: Full=Disease resistance protein RPS5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^2-105^E:3.6e-11",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G12220`KO:K13460","GO:0005622^cellular_component^intracellular`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0000166^molecular_function^nucleotide binding`GO:0038023^molecular_function^signaling receptor activity`GO:0008219^biological_process^cell death`GO:0006952^biological_process^defense response`GO:0009816^biological_process^defense response to bacterium, incompatible interaction`GO:0009626^biological_process^plant-type hypersensitive response`GO:0007165^biological_process^signal transduction","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN42606_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.20964004605782,"0.00186868212993374","0.00271892256981804","TRINITY_DN42606_c0_g1_i1","UBC23_ARATH^UBC23_ARATH^Q:1198-500,H:817-1051^50%ID^E:1e-68^RecName: Full=Probable ubiquitin-conjugating enzyme E2 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42606_c0_g1_i1.p1","212-1219[-]","UBC23_ARATH^UBC23_ARATH^Q:8-274,H:817-1087^47.45%ID^E:5e-72^RecName: Full=Probable ubiquitin-conjugating enzyme E2 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00179.23^UQ_con^Ubiquitin-conjugating enzyme^42-160^E:1.6e-24",".",".","ENOG410XQ7W^ubiquitin-conjugating enzyme","KEGG:ath:AT2G16920`KO:K10581","GO:0005829^cellular_component^cytosol`GO:0005524^molecular_function^ATP binding`GO:0061630^molecular_function^ubiquitin protein ligase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding",".",".","."]
["TRINITY_DN45928_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.21140573356477,"0.00392217916754416","0.00555187553087939","TRINITY_DN45928_c3_g4_i1","RUK_ARATH^RUK_ARATH^Q:4230-142,H:1-1366^61.54%ID^E:0^RecName: Full=Serine/threonine-protein kinase RUNKEL {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45928_c3_g4_i1.p1","139-4230[-]","RUK_ARATH^RUK_ARATH^Q:1-1363,H:1-1366^61.9%ID^E:0^RecName: Full=Serine/threonine-protein kinase RUNKEL {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^4-254^E:2.3e-66`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^6-250^E:2.9e-40",".",".","ENOG410XRQ6^Serine threonine kinase","KEGG:ath:AT5G18700`KO:K17545","GO:0005874^cellular_component^microtubule`GO:0009524^cellular_component^phragmoplast`GO:0009506^cellular_component^plasmodesma`GO:0009574^cellular_component^preprophase band`GO:0005819^cellular_component^spindle`GO:0005524^molecular_function^ATP binding`GO:0008017^molecular_function^microtubule binding`GO:0016740^molecular_function^transferase activity`GO:0007349^biological_process^cellularization`GO:0000911^biological_process^cytokinesis by cell plate formation`GO:0010342^biological_process^endosperm cellularization`GO:0009556^biological_process^microsporogenesis`GO:0000914^biological_process^phragmoplast assembly`GO:0009555^biological_process^pollen development`GO:0006468^biological_process^protein phosphorylation`GO:0010245^biological_process^radial microtubular system formation","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45567_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.21259507536737,{"v":6992963997.46598,"d":"6.99E+09"},"0.000113179462818495","TRINITY_DN45567_c0_g1_i8","R1B23_SOLDE^R1B23_SOLDE^Q:52-627,H:1031-1225^29.15%ID^E:2e-07^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45567_c0_g1_i8.p1","1-672[+]","R1B23_SOLDE^R1B23_SOLDE^Q:18-209,H:1031-1225^29.15%ID^E:6e-08^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN47654_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.21312448210918,"0.0023017650103921","0.00332222387094491","TRINITY_DN47654_c1_g1_i2","NRPE1_ARATH^NRPE1_ARATH^Q:351-4463,H:1-1374^58.15%ID^E:0^RecName: Full=DNA-directed RNA polymerase V subunit 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47654_c1_g1_i2.p1","351-4475[+]","NRPE1_ARATH^NRPE1_ARATH^Q:10-1371,H:10-1374^58.56%ID^E:0^RecName: Full=DNA-directed RNA polymerase V subunit 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04997.9^RNA_pol_Rpb1_1^RNA polymerase Rpb1, domain 1^43-281^E:3e-12`PF00623.17^RNA_pol_Rpb1_2^RNA polymerase Rpb1, domain 2^322-475^E:4.6e-34`PF04983.15^RNA_pol_Rpb1_3^RNA polymerase Rpb1, domain 3^480-623^E:8.1e-10`PF04998.14^RNA_pol_Rpb1_5^RNA polymerase Rpb1, domain 5^751-1175^E:9.4e-08",".",".","COG0086^DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)","KEGG:ath:AT2G40030`KO:K16251","GO:0005666^cellular_component^DNA-directed RNA polymerase III complex`GO:0000419^cellular_component^DNA-directed RNA polymerase V complex`GO:0016604^cellular_component^nuclear body`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003899^molecular_function^DNA-directed RNA polymerase activity`GO:0046872^molecular_function^metal ion binding`GO:0006306^biological_process^DNA methylation`GO:0035194^biological_process^posttranscriptional gene silencing by RNA`GO:0030422^biological_process^production of siRNA involved in RNA interference`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006383^biological_process^transcription from RNA polymerase III promoter","GO:0003677^molecular_function^DNA binding`GO:0003899^molecular_function^DNA-directed RNA polymerase activity`GO:0006351^biological_process^transcription, DNA-templated",".","."]
["TRINITY_DN32269_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.22263192334051,"0.00085612983754074","0.00128078033989172","TRINITY_DN32269_c0_g1_i1","MAN6_ORYSJ^MAN6_ORYSJ^Q:1675-509,H:44-430^58.88%ID^E:3e-151^RecName: Full=Mannan endo-1,4-beta-mannosidase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN32269_c0_g1_i1.p1","455-1786[-]","MAN6_ORYSJ^MAN6_ORYSJ^Q:38-426,H:44-430^58.88%ID^E:4e-154^RecName: Full=Mannan endo-1,4-beta-mannosidase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00150.15^Cellulase^Cellulase (glycosyl hydrolase family 5)^72-385^E:1.4e-12",".",".","COG3934^Mannan endo-1,4-beta-mannosidase","KEGG:osa:4340863","GO:0005576^cellular_component^extracellular region`GO:0016985^molecular_function^mannan endo-1,4-beta-mannosidase activity`GO:0046355^biological_process^mannan catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47233_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.22549733885806,"0.0384726187407014","0.0489383434280962","TRINITY_DN47233_c3_g2_i1","Y3471_ARATH^Y3471_ARATH^Q:269-6,H:39-125^48.86%ID^E:5e-20^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47233_c3_g2_i1.p1","3-359[-]","Y3471_ARATH^Y3471_ARATH^Q:31-118,H:39-125^48.86%ID^E:1e-20^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^31-69^E:2.4e-07`PF00560.30^LRR_1^Leucine Rich Repeat^100-117^E:0.91","sigP:1^23^0.539^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47110","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44843_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.2272369782594,"0.00020323332062389","0.000318608691741225","TRINITY_DN44843_c3_g1_i4","R1B8_SOLDE^R1B8_SOLDE^Q:306-518,H:709-786^42.5%ID^E:6e-08^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1B8_SOLDE^R1B8_SOLDE^Q:256-303,H:694-709^50%ID^E:6e-08^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44843_c3_g1_i4.p1","318-695[+]","R1A4_SOLDE^R1A4_SOLDE^Q:12-67,H:802-858^47.37%ID^E:5e-07^RecName: Full=Putative late blight resistance protein homolog R1A-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46639_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",-1.23051261896277,"0.00206384467329934","0.00299223056541303","TRINITY_DN46639_c0_g6_i1","PLDA1_RICCO^PLDA1_RICCO^Q:165-2504,H:31-808^70.13%ID^E:0^RecName: Full=Phospholipase D alpha 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN46639_c0_g6_i1.p1","879-2507[+]","PLDA1_RICCO^PLDA1_RICCO^Q:1-542,H:269-808^73.8%ID^E:0^RecName: Full=Phospholipase D alpha 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus","PF00614.19^PLDc^Phospholipase D Active site motif^59-96^E:7.3e-10`PF13091.3^PLDc_2^PLD-like domain^237-423^E:9.7e-08`PF00614.19^PLDc^Phospholipase D Active site motif^389-415^E:1e-07`PF12357.5^PLD_C^Phospholipase D C terminal^460-531^E:9.7e-28",".",".",".",".","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005886^cellular_component^plasma membrane`GO:0009536^cellular_component^plastid`GO:0005773^cellular_component^vacuole`GO:0005509^molecular_function^calcium ion binding`GO:0070290^molecular_function^N-acylphosphatidylethanolamine-specific phospholipase D activity`GO:0004630^molecular_function^phospholipase D activity`GO:0016042^biological_process^lipid catabolic process`GO:0046470^biological_process^phosphatidylcholine metabolic process","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN8456_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.23595284964435,"0.00030127351492625","0.000466009866080636","TRINITY_DN8456_c0_g1_i1","ARFR_ORYSJ^ARFR_ORYSJ^Q:71-1222,H:299-699^54.09%ID^E:2e-124^RecName: Full=Auxin response factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN8456_c0_g1_i1.p1","2-1228[+]","ARFR_ORYSJ^ARFR_ORYSJ^Q:4-406,H:279-698^54.5%ID^E:1e-140^RecName: Full=Auxin response factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF06507.10^Auxin_resp^Auxin response factor^17-100^E:6.1e-32",".",".","ENOG410ZZ2C^auxin response factor","KEGG:osa:4341882","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009725^biological_process^response to hormone`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN43250_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.24192926336147,"0.000194272104332827","0.00030496176524569","TRINITY_DN43250_c0_g1_i1","ZDH12_ARATH^ZDH12_ARATH^Q:994-521,H:151-287^30.43%ID^E:6e-10^RecName: Full=Probable protein S-acyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43250_c0_g1_i1.p1","515-1258[-]","ZDHC2_ARATH^ZDHC2_ARATH^Q:89-243,H:372-520^27.95%ID^E:8e-11^RecName: Full=Probable protein S-acyltransferase 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01529.17^zf-DHHC^DHHC palmitoyltransferase^89-205^E:6.2e-21",".",".","COG0666^Ankyrin Repeat`COG5273^Zinc finger, DHHC-type containing","KEGG:ath:AT2G14255","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0019706^molecular_function^protein-cysteine S-palmitoyltransferase activity`GO:0008270^molecular_function^zinc ion binding","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN46043_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.24524603416908,"0.00419261886120053","0.00591755488254492","TRINITY_DN46043_c0_g4_i2","PTR1_ARATH^PTR1_ARATH^Q:88-912,H:293-564^61.45%ID^E:2e-105^RecName: Full=Protein NRT1/ PTR FAMILY 8.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46043_c0_g4_i2.p1","256-936[+]","PTR1_ARATH^PTR1_ARATH^Q:1-224,H:349-569^60.27%ID^E:4e-92^RecName: Full=Protein NRT1/ PTR FAMILY 8.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^1-177^E:9e-43",".",".","COG3104^transporter","KEGG:ath:AT3G54140","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0042936^molecular_function^dipeptide transporter activity`GO:0042937^molecular_function^tripeptide transporter activity`GO:0042938^biological_process^dipeptide transport`GO:0006807^biological_process^nitrogen compound metabolic process`GO:0015031^biological_process^protein transport`GO:0042939^biological_process^tripeptide transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46667_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.25675987071174,"0.00685233738938469","0.00946373907971559","TRINITY_DN46667_c2_g4_i2","DRL4_ARATH^DRL4_ARATH^Q:814-83,H:1-245^34%ID^E:3e-29^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46667_c2_g4_i2.p1","2-814[-]","DRL4_ARATH^DRL4_ARATH^Q:1-244,H:1-245^34%ID^E:1e-29^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^176-250^E:1.1e-14",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G50180","GO:0009506^cellular_component^plasmodesma`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN118369_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.2652031318973,"0.00437711170331671","0.00616524097381418","TRINITY_DN118369_c0_g1_i1","PUB7_ARATH^PUB7_ARATH^Q:1179-358,H:455-737^27.97%ID^E:3e-13^RecName: Full=U-box domain-containing protein 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN118369_c0_g1_i1.p1","193-1503[-]","PUB7_ARATH^PUB7_ARATH^Q:93-382,H:439-737^27.48%ID^E:4e-17^RecName: Full=U-box domain-containing protein 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XQ5K^Ubox domain-containing protein","KEGG:ath:AT1G67530","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity",".",".","."]
["TRINITY_DN44569_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.26792965951169,"0.000275137239918305","0.000426908603846495","TRINITY_DN44569_c2_g1_i2","MYB1_MAIZE^MYB1_MAIZE^Q:61-345,H:1-95^71.58%ID^E:2e-44^RecName: Full=Myb-related protein Zm1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN44569_c2_g1_i2.p1","1-351[+]","MYB1_MAIZE^MYB1_MAIZE^Q:21-115,H:1-95^71.58%ID^E:2e-45^RecName: Full=Myb-related protein Zm1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^36-83^E:5.6e-15`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^39-98^E:1.2e-11",".",".","COG5147^Myblike DNAbinding domain containing protein",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN35480_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.26846837363781,"0.00992561601402969","0.0134925110857911","TRINITY_DN35480_c0_g1_i2","XRI1_ARATH^XRI1_ARATH^Q:1232-351,H:6-300^45.33%ID^E:1e-71^RecName: Full=Protein XRI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35480_c0_g1_i2.p1","348-1343[-]","XRI1_ARATH^XRI1_ARATH^Q:38-331,H:6-300^46.51%ID^E:6e-76^RecName: Full=Protein XRI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YGP1^NA","KEGG:ath:AT5G48720","GO:0005634^cellular_component^nucleus`GO:0006281^biological_process^DNA repair`GO:0007143^biological_process^female meiotic division`GO:0007140^biological_process^male meiosis`GO:0009555^biological_process^pollen development`GO:0010165^biological_process^response to X-ray",".",".","."]
["TRINITY_DN43519_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.2720200874212,"0.00540344076757055","0.0075471776862221","TRINITY_DN43519_c0_g1_i22","LIS_CLABR^LIS_CLABR^Q:1859-354,H:349-819^43.33%ID^E:6e-121^RecName: Full=S-linalool synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia",".","TRINITY_DN43519_c0_g1_i22.p1","267-1553[-]","LIS_CLABR^LIS_CLABR^Q:3-400,H:427-819^46.53%ID^E:2e-115^RecName: Full=S-linalool synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia","PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^49-306^E:4.3e-60",".",".",".","KEGG:ag:AAC49395","GO:0000287^molecular_function^magnesium ion binding`GO:0034007^molecular_function^S-linalool synthase activity`GO:0010333^molecular_function^terpene synthase activity","GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity",".","."]
["TRINITY_DN40659_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.27476998627077,"0.000261856406343344","0.000407062956281566","TRINITY_DN40659_c0_g1_i1","Y2090_ARATH^Y2090_ARATH^Q:29-730,H:1-233^69.66%ID^E:2e-97^RecName: Full=Putative ABC1 protein At2g40090;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2090_ARATH^Y2090_ARATH^Q:1382-1651,H:233-317^66.67%ID^E:2e-28^RecName: Full=Putative ABC1 protein At2g40090;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40659_c0_g1_i1.p1","29-742[+]","Y2090_ARATH^Y2090_ARATH^Q:1-234,H:1-233^70.94%ID^E:4e-114^RecName: Full=Putative ABC1 protein At2g40090;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03109.13^ABC1^ABC1 family^148-234^E:1.4e-26",".",".","COG0661^Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)","KEGG:ath:AT2G40090`KO:K08869","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN45848_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.27497668458798,"0.00105280214841203","0.00156304929678847","TRINITY_DN45848_c2_g3_i1","Y1133_ARATH^Y1133_ARATH^Q:4167-1774,H:27-842^47.4%ID^E:0^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45848_c2_g3_i1.p1","1771-4260[-]","Y1133_ARATH^Y1133_ARATH^Q:32-829,H:27-842^47.4%ID^E:0^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^82-186^E:2.8e-31`PF00954.17^S_locus_glycop^S-locus glycoprotein domain^217-325^E:9.2e-29`PF08276.8^PAN_2^PAN-like domain^352-411^E:4.3e-14`PF00069.22^Pkinase^Protein kinase domain^512-778^E:3.5e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^513-779^E:9.7e-46","sigP:1^32^0.657^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G11330","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44015_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.27753799356722,"0.00202772773003816","0.00294189193767272","TRINITY_DN44015_c0_g3_i2","GRF1_ARATH^GRF1_ARATH^Q:303-1310,H:180-487^48.86%ID^E:2e-77^RecName: Full=Growth-regulating factor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44015_c0_g3_i2.p1","558-1436[+]","GRF1_ARATH^GRF1_ARATH^Q:1-269,H:275-505^46.21%ID^E:4e-44^RecName: Full=Growth-regulating factor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111S3M^growth-regulating factor","KEGG:ath:AT2G22840","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0061062^biological_process^regulation of nematode larval development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009624^biological_process^response to nematode`GO:0048364^biological_process^root development`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN116951_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.27829270099935,"0.00058859577493798","0.000891159908499763","TRINITY_DN116951_c0_g1_i1","PRPX_HORVU^PRPX_HORVU^Q:263-964,H:1-231^49.79%ID^E:5e-72^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN116951_c0_g1_i1.p1","191-970[+]","PRPX_HORVU^PRPX_HORVU^Q:25-258,H:1-231^49.79%ID^E:2e-74^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".",".",".","ENOG410YA3P^NA",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN46066_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.27907461096834,"0.00232821847481861","0.00335898875110422","TRINITY_DN46066_c1_g1_i3","R1B17_SOLDE^R1B17_SOLDE^Q:270-1,H:722-808^38.89%ID^E:3e-19^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1B17_SOLDE^R1B17_SOLDE^Q:554-381,H:626-683^37.93%ID^E:3e-19^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46066_c1_g1_i3.p1","216-635[-]","R1A6_SOLDE^R1A6_SOLDE^Q:33-132,H:617-716^35%ID^E:2e-12^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^4-119^E:1.1e-18",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN43818_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.27947732360156,"0.0221624198742335","0.0289884663680982","TRINITY_DN43818_c1_g1_i1","Y232_RICCO^Y232_RICCO^Q:1448-282,H:175-575^41.44%ID^E:5e-91^RecName: Full=UPF0392 protein RCOM_0530710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN43818_c1_g1_i1.p1","279-1916[-]","Y8219_ORYSJ^Y8219_ORYSJ^Q:112-531,H:126-574^39.34%ID^E:7e-94^RecName: Full=UPF0392 protein Os08g0121900;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF01697.24^Glyco_transf_92^Glycosyltransferase family 92^266-480^E:2e-28`PF13704.3^Glyco_tranf_2_4^Glycosyl transferase family 2^278-366^E:1.6e-11",".",".","COG0463^Glycosyl transferase, family 2","KEGG:osa:4344548","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN44549_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.28082937511241,"0.0223930602551129","0.0292733646329191","TRINITY_DN44549_c1_g2_i2","PTR9_ARATH^PTR9_ARATH^Q:1842-214,H:21-555^62.32%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 5.10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44549_c1_g2_i2.p1","211-1926[-]","PTR9_ARATH^PTR9_ARATH^Q:28-571,H:20-555^62.39%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 5.10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^57-511^E:2.4e-10`PF00854.18^PTR2^POT family^110-524^E:8.1e-87",".",".","COG3104^transporter","KEGG:ath:AT1G22540","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006857^biological_process^oligopeptide transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45685_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.28216936458378,"0.00655433401620255","0.00907505326215677","TRINITY_DN45685_c0_g1_i1","U86A1_ARATH^U86A1_ARATH^Q:2384-960,H:1-477^61.95%ID^E:0^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U86A1_ARATH^U86A1_ARATH^Q:5-625,H:272-477^54.11%ID^E:3e-70^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45685_c0_g1_i1.p1","846-2480[-]","U86A1_ARATH^U86A1_ARATH^Q:33-507,H:1-477^61.95%ID^E:0^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^314-464^E:2.4e-21",".",".","COG1819^Transferase","KEGG:ath:AT2G36970","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44423_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.28367150050374,"0.000297553061681576","0.000460385099334761","TRINITY_DN44423_c2_g1_i1","GATA9_ARATH^GATA9_ARATH^Q:1130-285,H:18-308^44.34%ID^E:4e-63^RecName: Full=GATA transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44423_c2_g1_i1.p1","282-1214[-]","GATA9_ARATH^GATA9_ARATH^Q:25-310,H:14-308^45.37%ID^E:1e-71^RecName: Full=GATA transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00320.24^GATA^GATA zinc finger^211-245^E:1.1e-14",".",".","COG5641^Transcription factor","KEGG:ath:AT4G32890","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003682^molecular_function^chromatin binding`GO:0000977^molecular_function^RNA polymerase II regulatory region sequence-specific DNA binding`GO:0001085^molecular_function^RNA polymerase II transcription factor binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0001228^molecular_function^transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding`GO:0008270^molecular_function^zinc ion binding`GO:0030154^biological_process^cell differentiation`GO:0007623^biological_process^circadian rhythm`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0009416^biological_process^response to light stimulus`GO:0006366^biological_process^transcription from RNA polymerase II promoter","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43675_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.28685584783508,"0.00211838045980322","0.00306788725041208","TRINITY_DN43675_c0_g1_i4","SUVH5_ARATH^SUVH5_ARATH^Q:1815-193,H:309-794^44.44%ID^E:8e-133^RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43675_c0_g1_i4.p1","190-2850[-]","SUVH5_ARATH^SUVH5_ARATH^Q:346-886,H:309-794^44.44%ID^E:3e-134^RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02182.14^SAD_SRA^SAD/SRA domain^399-557^E:6e-39`PF05033.13^Pre-SET^Pre-SET motif^630-728^E:5.2e-16`PF00856.25^SET^SET domain^747-856^E:7.7e-23",".",".","COG2940^Histone-lysine N-methyltransferase`COG3440^ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase","KEGG:ath:AT2G35160`KO:K11420","GO:0000775^cellular_component^chromosome, centromeric region`GO:0005634^cellular_component^nucleus`GO:0042054^molecular_function^histone methyltransferase activity`GO:0018024^molecular_function^histone-lysine N-methyltransferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0031048^biological_process^chromatin silencing by small RNA`GO:0016571^biological_process^histone methylation`GO:0040029^biological_process^regulation of gene expression, epigenetic`GO:0010200^biological_process^response to chitin","GO:0042393^molecular_function^histone binding`GO:0008270^molecular_function^zinc ion binding`GO:0018024^molecular_function^histone-lysine N-methyltransferase activity`GO:0034968^biological_process^histone lysine methylation`GO:0005634^cellular_component^nucleus`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN28646_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.29117174122025,"0.00130155770452334","0.00191718959779251","TRINITY_DN28646_c1_g1_i1","TAF8_ARATH^TAF8_ARATH^Q:1145-705,H:25-170^38.93%ID^E:1e-18^RecName: Full=Transcription initiation factor TFIID subunit 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28646_c1_g1_i1.p1","441-1379[-]","TAF8_ARATH^TAF8_ARATH^Q:79-227,H:25-172^38.41%ID^E:1e-19^RecName: Full=Transcription initiation factor TFIID subunit 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07524.10^Bromo_TP^Bromodomain associated^80-149^E:3.8e-18",".",".","ENOG410ZS4D^TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor","KEGG:ath:AT4G34340`KO:K14649","GO:0005634^cellular_component^nucleus`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47345_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.29545454984898,"0.00549863689084123","0.00767426982578519","TRINITY_DN47345_c0_g1_i2","FAB1B_ARATH^FAB1B_ARATH^Q:5527-2501,H:5-1016^58.75%ID^E:0^RecName: Full=1-phosphatidylinositol-3-phosphate 5-kinase FAB1B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FAB1B_ARATH^FAB1B_ARATH^Q:2224-2,H:1001-1739^55.51%ID^E:0^RecName: Full=1-phosphatidylinositol-3-phosphate 5-kinase FAB1B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47345_c0_g1_i2.p1","2462-5530[-]","FAB1B_ARATH^FAB1B_ARATH^Q:2-1010,H:5-1016^59.33%ID^E:0^RecName: Full=1-phosphatidylinositol-3-phosphate 5-kinase FAB1B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01363.18^FYVE^FYVE zinc finger^33-100^E:1.5e-18`PF00118.21^Cpn60_TCP1^TCP-1/cpn60 chaperonin family^401-647^E:2.4e-32",".",".","COG0459^Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity)`COG5253^phosphatidylinositol-4-phosphate 5-kinase","KEGG:ath:AT3G14270`KO:K00921","GO:0005768^cellular_component^endosome`GO:0010008^cellular_component^endosome membrane`GO:0005739^cellular_component^mitochondrion`GO:0000285^molecular_function^1-phosphatidylinositol-3-phosphate 5-kinase activity`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0010256^biological_process^endomembrane system organization`GO:0046854^biological_process^phosphatidylinositol phosphorylation`GO:0009555^biological_process^pollen development`GO:0090332^biological_process^stomatal closure`GO:0007033^biological_process^vacuole organization","GO:0046872^molecular_function^metal ion binding`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN58651_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.29554936870102,"0.0252553412855227","0.0328394990465581","TRINITY_DN58651_c0_g1_i1","PUB27_ARATH^PUB27_ARATH^Q:341-1537,H:1-420^43.53%ID^E:7e-86^RecName: Full=U-box domain-containing protein 27;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN58651_c0_g1_i1.p1","341-1540[+]","PUB27_ARATH^PUB27_ARATH^Q:1-399,H:1-420^43.53%ID^E:5e-94^RecName: Full=U-box domain-containing protein 27;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^10-74^E:2.9e-18",".",".","ENOG410YF56^Ubox domain-containing protein","KEGG:ath:AT5G64660","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010200^biological_process^response to chitin","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN44212_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.30497727782557,"0.000322701534627766","0.000497945234008346","TRINITY_DN44212_c1_g1_i3","ARAD1_ARATH^ARAD1_ARATH^Q:1036-2154,H:60-422^38.16%ID^E:1e-70^RecName: Full=Probable arabinosyltransferase ARAD1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44212_c1_g1_i3.p1","760-2178[+]","ARAD1_ARATH^ARAD1_ARATH^Q:93-452,H:60-409^38.69%ID^E:1e-74^RecName: Full=Probable arabinosyltransferase ARAD1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03016.12^Exostosin^Exostosin family^92-406^E:1.1e-61",".",".","ENOG410XTFH^Exostosin","KEGG:ath:AT2G35100","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0071555^biological_process^cell wall organization`GO:0045489^biological_process^pectin biosynthetic process",".",".","."]
["TRINITY_DN46489_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.30724195797075,"0.0293547225120491","0.0378586686926623","TRINITY_DN46489_c0_g1_i3","FAO4A_ARATH^FAO4A_ARATH^Q:1952-3,H:1-664^53.06%ID^E:0^RecName: Full=Long-chain-alcohol oxidase FAO4A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46489_c0_g1_i3.p1","3-1952[-]","FAO4A_ARATH^FAO4A_ARATH^Q:1-650,H:1-664^53.06%ID^E:0^RecName: Full=Long-chain-alcohol oxidase FAO4A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00732.16^GMC_oxred_N^GMC oxidoreductase^221-487^E:9e-63",".",".","COG2303^oxidoreductase","KEGG:ath:AT4G19380`KO:K17756","GO:0016021^cellular_component^integral component of membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0046577^molecular_function^long-chain-alcohol oxidase activity","GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45149_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.30895159251028,"0.00160432243740362","0.00234637404814524","TRINITY_DN45149_c0_g2_i1","Y4265_ARATH^Y4265_ARATH^Q:3458-333,H:22-1065^65.33%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g26540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45149_c0_g2_i1.p1","258-3518[-]","Y4265_ARATH^Y4265_ARATH^Q:21-1086,H:22-1091^64.96%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g26540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^25-64^E:2.4e-09`PF13855.3^LRR_8^Leucine rich repeat^309-368^E:7.5e-10`PF13855.3^LRR_8^Leucine rich repeat^599-654^E:2.2e-06`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^762-1035^E:2.7e-34`PF00069.22^Pkinase^Protein kinase domain^763-966^E:2.2e-38","sigP:1^23^0.877^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G26540","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN87673_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.30905726848159,"0.0158579434885465","0.021086683171314","TRINITY_DN87673_c0_g1_i1","Y1124_ARATH^Y1124_ARATH^Q:592-3144,H:25-879^61.57%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g12460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87673_c0_g1_i1.p1","511-3156[+]","Y1124_ARATH^Y1124_ARATH^Q:12-878,H:6-879^61.6%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g12460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^28-67^E:2.9e-07`PF13855.3^LRR_8^Leucine rich repeat^287-346^E:8.7e-07`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^599-872^E:6.3e-33`PF00069.22^Pkinase^Protein kinase domain^599-870^E:4.9e-32","sigP:1^29^0.652^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G12460","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN47441_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.31018147146082,"0.00153800741557404","0.00225131004761127","TRINITY_DN47441_c0_g1_i1","LPAI_ARATH^LPAI_ARATH^Q:398-883,H:6-158^49.39%ID^E:8e-37^RecName: Full=Phospholipase A I;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47441_c0_g1_i1.p1","233-883[+]","LPAI_ARATH^LPAI_ARATH^Q:42-217,H:4-158^48.31%ID^E:3e-38^RecName: Full=Phospholipase A I;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XQXJ^patatin-like phospholipase domain containing 8","KEGG:ath:AT1G61850","GO:0009507^cellular_component^chloroplast`GO:0047372^molecular_function^acylglycerol lipase activity`GO:0004620^molecular_function^phospholipase activity`GO:0050832^biological_process^defense response to fungus`GO:0009695^biological_process^jasmonic acid biosynthetic process`GO:0016042^biological_process^lipid catabolic process",".",".","."]
["TRINITY_DN44213_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.31413176956592,"0.00212094468938923","0.00307127596137205","TRINITY_DN44213_c1_g3_i1","SCAR1_ARATH^SCAR1_ARATH^Q:289-855,H:56-234^49.74%ID^E:4e-55^RecName: Full=Protein SCAR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SCAR1_ARATH^SCAR1_ARATH^Q:132-287,H:1-52^59.62%ID^E:4e-55^RecName: Full=Protein SCAR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44213_c1_g3_i1.p1","915-1916[+]","SCAR3_ARATH^SCAR3_ARATH^Q:86-187,H:719-830^38.26%ID^E:8e-09^RecName: Full=Protein SCAR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XRBQ^WAS protein family, member",".","GO:0005856^cellular_component^cytoskeleton`GO:0031209^cellular_component^SCAR complex`GO:0030036^biological_process^actin cytoskeleton organization`GO:0051127^biological_process^positive regulation of actin nucleation",".",".","."]
["TRINITY_DN41800_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.31452992768493,"0.000542055479572427","0.00082297101336947","TRINITY_DN41800_c0_g1_i1","RLP12_ARATH^RLP12_ARATH^Q:2096-3001,H:494-793^36.39%ID^E:4e-54^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:1597-2088,H:324-489^34.91%ID^E:4e-54^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:74-637,H:8-218^28.7%ID^E:2e-10^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:1468-2127,H:333-549^31.3%ID^E:1e-09^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2615-2911,H:165-269^39.05%ID^E:2e-09^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2591-2938,H:109-225^35.9%ID^E:7e-09^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2087-2863,H:253-533^25.18%ID^E:3e-08^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2603-2863,H:185-271^39.08%ID^E:1e-07^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2177-2968,H:116-319^28.68%ID^E:3e-07^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2096-2863,H:112-319^28.29%ID^E:1e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41800_c0_g1_i1.p2","2558-3172[+]","BRL2_ARATH^BRL2_ARATH^Q:11-171,H:603-774^37.21%ID^E:5e-26^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRL2_ARATH^BRL2_ARATH^Q:17-123,H:403-509^34.86%ID^E:2e-09^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRL2_ARATH^BRL2_ARATH^Q:17-103,H:181-270^38.89%ID^E:5e-09^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRL2_ARATH^BRL2_ARATH^Q:15-125,H:206-318^36.28%ID^E:5e-09^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRL2_ARATH^BRL2_ARATH^Q:20-103,H:454-537^38.1%ID^E:1e-08^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRL2_ARATH^BRL2_ARATH^Q:23-103,H:385-465^35.8%ID^E:2e-07^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRL2_ARATH^BRL2_ARATH^Q:10-131,H:350-471^33.33%ID^E:7e-07^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRL2_ARATH^BRL2_ARATH^Q:12-118,H:251-360^36.36%ID^E:4e-06^RecName: Full=Serine/threonine-protein kinase BRI1-like 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT2G01950","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004675^molecular_function^transmembrane receptor protein serine/threonine kinase activity`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0009742^biological_process^brassinosteroid mediated signaling pathway`GO:0010305^biological_process^leaf vascular tissue pattern formation`GO:0010233^biological_process^phloem transport`GO:0007178^biological_process^transmembrane receptor protein serine/threonine kinase signaling pathway`GO:0010051^biological_process^xylem and phloem pattern formation",".",".","."]
["TRINITY_DN30344_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.32622151981565,"0.0225429148523258","0.0294611139211195","TRINITY_DN30344_c0_g1_i1","PUB23_ARATH^PUB23_ARATH^Q:1218-43,H:9-410^49.63%ID^E:6e-131^RecName: Full=E3 ubiquitin-protein ligase PUB23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN30344_c0_g1_i1.p1","34-1221[-]","PUB23_ARATH^PUB23_ARATH^Q:2-393,H:9-410^49.63%ID^E:4e-132^RecName: Full=E3 ubiquitin-protein ligase PUB23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^5-74^E:4.3e-20",".",".","ENOG410YC1Z^e3 ubiquitin-protein ligase","KEGG:ath:AT2G35930","GO:0005829^cellular_component^cytosol`GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0006952^biological_process^defense response`GO:0051865^biological_process^protein autoubiquitination`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin`GO:0009414^biological_process^response to water deprivation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN45489_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.32742359870492,"0.0129747255154999","0.0174296505964952","TRINITY_DN45489_c2_g3_i2","P2C60_ARATH^P2C60_ARATH^Q:581-847,H:266-355^61.11%ID^E:6e-26^RecName: Full=Probable protein phosphatase 2C 60;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45489_c2_g3_i2.p1","527-865[+]","P2C60_ARATH^P2C60_ARATH^Q:19-107,H:266-355^61.11%ID^E:2e-28^RecName: Full=Probable protein phosphatase 2C 60;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00481.18^PP2C^Protein phosphatase 2C^22-64^E:0.00021",".",".","COG0631^Phosphatase","KEGG:ath:AT4G31860`KO:K17499","GO:0005886^cellular_component^plasma membrane`GO:0046872^molecular_function^metal ion binding`GO:0004722^molecular_function^protein serine/threonine phosphatase activity","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN47384_c3_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.33391181241787,"0.0240548370074967","0.0313469567304184","TRINITY_DN47384_c3_g3_i7","SPO11_ARATH^SPO11_ARATH^Q:872-240,H:182-359^60.19%ID^E:1e-79^RecName: Full=Meiotic recombination protein SPO11-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SPO11_ARATH^SPO11_ARATH^Q:1280-1143,H:131-176^65.22%ID^E:1e-11^RecName: Full=Meiotic recombination protein SPO11-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47384_c3_g3_i7.p1","231-545[-]","SPO11_ARATH^SPO11_ARATH^Q:1-102,H:258-359^66.67%ID^E:4e-42^RecName: Full=Meiotic recombination protein SPO11-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1697^DNA topoisomerase VI, subunit A","KEGG:ath:AT3G13170`KO:K10878","GO:0005694^cellular_component^chromosome`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0016787^molecular_function^hydrolase activity`GO:0051026^biological_process^chiasma assembly`GO:0000737^biological_process^DNA catabolic process, endonucleolytic`GO:0042138^biological_process^meiotic DNA double-strand break formation`GO:0007131^biological_process^reciprocal meiotic recombination`GO:0007129^biological_process^synapsis",".",".","."]
["TRINITY_DN47344_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.34111429323,"0.0141981944608114","0.0189819919402597","TRINITY_DN47344_c1_g2_i1","R1A6_SOLDE^R1A6_SOLDE^Q:301-2,H:676-771^45%ID^E:7e-17^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47344_c1_g2_i1.p1","2-316[-]","R1A6_SOLDE^R1A6_SOLDE^Q:6-105,H:676-771^45%ID^E:7e-17^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^6-103^E:8.1e-19",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN43553_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.34158375999533,"0.000240331035000919","0.000374622003269207","TRINITY_DN43553_c0_g1_i3","PLDZ1_ARATH^PLDZ1_ARATH^Q:1707-88,H:42-581^68.14%ID^E:0^RecName: Full=Phospholipase D zeta 1 {ECO:0000303|PubMed:11891260};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43553_c0_g1_i3.p1","58-1794[-]","PLDZ1_ARATH^PLDZ1_ARATH^Q:30-569,H:42-581^68.14%ID^E:0^RecName: Full=Phospholipase D zeta 1 {ECO:0000303|PubMed:11891260};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00787.21^PX^PX domain^43-195^E:1.4e-05`PF00169.26^PH^PH domain^208-328^E:4e-06`PF00614.19^PLDc^Phospholipase D Active site motif^465-492^E:6.7e-11",".",".","COG1502^Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)","KEGG:ath:AT3G16785`KO:K01115","GO:0016023^cellular_component^cytoplasmic, membrane-bounded vesicle`GO:0070290^molecular_function^N-acylphosphatidylethanolamine-specific phospholipase D activity`GO:0004630^molecular_function^phospholipase D activity`GO:0016042^biological_process^lipid catabolic process`GO:0048364^biological_process^root development","GO:0035091^molecular_function^phosphatidylinositol binding`GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN47715_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.34177969103212,"0.00010389497970594","0.000166206474807954","TRINITY_DN47715_c3_g2_i11","FHY3_ARATH^FHY3_ARATH^Q:737-1177,H:235-380^22.3%ID^E:5e-06^RecName: Full=Protein FAR-RED ELONGATED HYPOCOTYL 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47715_c3_g2_i11.p1","152-1414[+]","FHY3_ARATH^FHY3_ARATH^Q:196-342,H:235-380^22.3%ID^E:2e-06^RecName: Full=Protein FAR-RED ELONGATED HYPOCOTYL 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03108.12^DBD_Tnp_Mut^MuDR family transposase^51-109^E:2.3e-10`PF00872.15^Transposase_mut^Transposase, Mutator family^245-388^E:7.9e-11`PF10551.6^MULE^MULE transposase domain^246-339^E:1.9e-19",".",".","ENOG410ZJSX^protein FAR1-RELATED SEQUENCE 5-like","KEGG:ath:AT3G22170","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0007623^biological_process^circadian rhythm`GO:0042753^biological_process^positive regulation of circadian rhythm`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0010017^biological_process^red or far-red light signaling pathway`GO:0009585^biological_process^red, far-red light phototransduction`GO:0010218^biological_process^response to far red light`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0004803^molecular_function^transposase activity`GO:0006313^biological_process^transposition, DNA-mediated",".","."]
["TRINITY_DN47429_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.34384857294971,"0.0156108161924596","0.0207721939743487","TRINITY_DN47429_c1_g4_i3","PPR38_ARATH^PPR38_ARATH^Q:711-1172,H:444-598^43.87%ID^E:1e-47^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:43-414,H:225-346^31.5%ID^E:1e-47^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:422-625,H:381-448^30.88%ID^E:1e-47^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1214,H:234-401^32.74%ID^E:1e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:401-625,H:167-238^28%ID^E:1e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1136,H:269-410^26.06%ID^E:3e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:434-625,H:210-273^34.38%ID^E:3e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:49-420,H:122-208^20.47%ID^E:3e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1214,H:199-370^29.65%ID^E:9e-23^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:494-625,H:160-203^36.36%ID^E:9e-23^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1139,H:164-306^31.47%ID^E:1e-20^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:473-625,H:118-168^37.25%ID^E:1e-20^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1190,H:374-571^27.78%ID^E:8e-19^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:461-622,H:289-342^29.63%ID^E:8e-19^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1139,H:304-446^27.97%ID^E:3e-12^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1139,H:339-481^24.48%ID^E:4e-12^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:711-1211,H:129-295^27.98%ID^E:5e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:771-1214,H:114-261^31.76%ID^E:2e-10^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:365-667,H:438-532^37.62%ID^E:2e-09^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47429_c1_g4_i3.p1","804-1217[+]","PPR38_ARATH^PPR38_ARATH^Q:1-123,H:475-598^42.74%ID^E:4e-26^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-137,H:231-370^30.71%ID^E:2e-16^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-137,H:266-401^33.09%ID^E:8e-16^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-112,H:196-306^32.43%ID^E:3e-15^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-129,H:406-571^29.52%ID^E:4e-13^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:5-137,H:129-261^31.58%ID^E:5e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-111,H:301-410^24.55%ID^E:5e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-136,H:161-295^30.15%ID^E:2e-10^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-112,H:371-481^23.42%ID^E:2e-09^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:2-112,H:336-446^26.13%ID^E:8e-09^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^1-30^E:6.6e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^1-43^E:0.0043`PF12854.4^PPR_1^PPR repeat^2-24^E:6.7e-09`PF12854.4^PPR_1^PPR repeat^28-61^E:5.7e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^28-77^E:8.9e-06`PF13041.3^PPR_2^PPR repeat family^32-79^E:1.5e-13`PF01535.17^PPR^PPR repeat^36-65^E:1.2e-06`PF12854.4^PPR_1^PPR repeat^63-95^E:7.5e-06`PF13041.3^PPR_2^PPR repeat family^67-112^E:1.7e-11`PF01535.17^PPR^PPR repeat^70-100^E:0.02",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12700","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN39773_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.34500473070303,"0.0025563272085326","0.00367685197768926","TRINITY_DN39773_c0_g1_i4","GDL61_ARATH^GDL61_ARATH^Q:1027-137,H:82-380^64.88%ID^E:6e-138^RecName: Full=GDSL esterase/lipase At4g01130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39773_c0_g1_i4.p1","116-859[-]","GDL61_ARATH^GDL61_ARATH^Q:1-241,H:138-380^59.67%ID^E:3e-101^RecName: Full=GDSL esterase/lipase At4g01130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^28-224^E:3.3e-20",".",".","ENOG410Y9BR^GDSL esterase lipase","KEGG:ath:AT4G01130","GO:0005576^cellular_component^extracellular region`GO:0016788^molecular_function^hydrolase activity, acting on ester bonds`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN47492_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.34937445429785,"0.00034172841387169","0.000526177977791751","TRINITY_DN47492_c0_g3_i4","R1A6_SOLDE^R1A6_SOLDE^Q:13-849,H:927-1203^32.88%ID^E:6e-14^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47492_c0_g3_i4.p1","31-630[+]","R1B12_SOLDE^R1B12_SOLDE^Q:3-128,H:976-1104^35.34%ID^E:6e-08^RecName: Full=Putative late blight resistance protein homolog R1B-12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN47562_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.35303418006721,"0.0303472482913903","0.0390745615255156","TRINITY_DN47562_c0_g2_i1","SD11_ARATH^SD11_ARATH^Q:1-156,H:387-436^44.23%ID^E:3e-08^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47562_c0_g2_i1.p1","1-324[+]","SD11_ARATH^SD11_ARATH^Q:1-50,H:387-434^46%ID^E:2e-08^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08276.8^PAN_2^PAN-like domain^1-27^E:2.3e-05",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0048544^biological_process^recognition of pollen",".",".","."]
["TRINITY_DN45260_c4_g7","leaves S. abrotanoides","roots S. abrotanoides",-1.35698336071455,{"v":9142071362.02291,"d":"9.14E+09"},"0.000146851258348257","TRINITY_DN45260_c4_g7_i2","DOF56_ARATH^DOF56_ARATH^Q:201-1148,H:1-372^39.74%ID^E:3e-48^RecName: Full=Dof zinc finger protein DOF5.6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45260_c4_g7_i2.p1","3-1151[+]","DOF56_ARATH^DOF56_ARATH^Q:67-382,H:1-372^39.74%ID^E:2e-50^RecName: Full=Dof zinc finger protein DOF5.6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02701.12^zf-Dof^Dof domain, zinc finger^127-183^E:2.4e-33",".",".","ENOG410YEQW^Zinc finger protein","KEGG:ath:AT5G62940","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010087^biological_process^phloem or xylem histogenesis`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0010067^biological_process^procambium histogenesis`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45259_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.35831302174827,"0.00669464635604308","0.00925730521601716","TRINITY_DN45259_c1_g4_i1","DRL27_ARATH^DRL27_ARATH^Q:476-159,H:862-968^35.19%ID^E:1e-08^RecName: Full=Disease resistance protein At4g27190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45259_c1_g4_i1.p1","141-476[-]","DRL27_ARATH^DRL27_ARATH^Q:1-106,H:862-968^35.19%ID^E:6e-09^RecName: Full=Disease resistance protein At4g27190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G27190","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN46538_c1_g6","leaves S. abrotanoides","roots S. abrotanoides",-1.35934511457218,"0.0234169679852678","0.0305491583773506","TRINITY_DN46538_c1_g6_i1","R1B14_SOLDE^R1B14_SOLDE^Q:504-1,H:541-711^37.93%ID^E:4e-28^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46538_c1_g6_i1.p1","1-477[-]","R1B17_SOLDE^R1B17_SOLDE^Q:14-159,H:563-711^40.79%ID^E:3e-27^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^2-159^E:1.1e-40`PF13173.3^AAA_14^AAA domain^14-131^E:2.7e-06",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN28714_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.3679116962004,"0.0124892689728745","0.0168055848788315","TRINITY_DN28714_c0_g1_i2","ARG7_VIGRR^ARG7_VIGRR^Q:463-660,H:23-89^55.22%ID^E:2e-19^RecName: Full=Indole-3-acetic acid-induced protein ARG7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna",".","TRINITY_DN28714_c0_g1_i2.p1","235-696[+]","ARG7_VIGRR^ARG7_VIGRR^Q:77-142,H:23-89^55.22%ID^E:3e-20^RecName: Full=Indole-3-acetic acid-induced protein ARG7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna","PF02519.11^Auxin_inducible^Auxin responsive protein^59-141^E:2.9e-25",".",".",".",".","GO:0009733^biological_process^response to auxin","GO:0009733^biological_process^response to auxin",".","."]
["TRINITY_DN46309_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.36831319888911,"0.00180084466782513","0.00262286737615316","TRINITY_DN46309_c0_g1_i1","SBT19_ARATH^SBT19_ARATH^Q:71-1705,H:21-560^41.03%ID^E:7e-122^RecName: Full=Subtilisin-like protease SBT1.9 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46309_c0_g1_i1.p1","2-1705[+]","SBT19_ARATH^SBT19_ARATH^Q:5-568,H:4-560^40.55%ID^E:8e-131^RecName: Full=Subtilisin-like protease SBT1.9 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05922.13^Inhibitor_I9^Peptidase inhibitor I9^27-111^E:1e-15`PF00082.19^Peptidase_S8^Subtilase family^136-568^E:4.5e-44","sigP:1^23^0.877^YES",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT5G67090","GO:0004252^molecular_function^serine-type endopeptidase activity","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN47018_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.37022931928262,{"v":631208361.59644,"d":"6.31E+08"},"0.000102503714569219","TRINITY_DN47018_c0_g3_i1","ATL80_ARATH^ATL80_ARATH^Q:226-615,H:26-164^68.35%ID^E:2e-47^RecName: Full=RING-H2 finger protein ATL80;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47018_c0_g3_i1.p1","136-705[+]","ATL80_ARATH^ATL80_ARATH^Q:6-160,H:7-164^63.41%ID^E:5e-64^RecName: Full=RING-H2 finger protein ATL80;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^106-149^E:2.1e-14`PF17123.2^zf-RING_11^RING-like zinc finger^106-135^E:2e-12`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^107-148^E:9.8e-10`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^107-148^E:8e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^107-146^E:2.1e-05`PF12861.4^zf-ANAPC11^Anaphase-promoting complex subunit 11 RING-H2 finger^115-155^E:2.7e-06`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^116-149^E:1.1e-07",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT1G20823","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0061630^molecular_function^ubiquitin protein ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0070417^biological_process^cellular response to cold`GO:0006952^biological_process^defense response`GO:0009909^biological_process^regulation of flower development`GO:0010966^biological_process^regulation of phosphate transport`GO:0010200^biological_process^response to chitin","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0005680^cellular_component^anaphase-promoting complex",".","."]
["TRINITY_DN42350_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.3787540782668,"0.0219348699057768","0.028701798759014","TRINITY_DN42350_c0_g1_i3","Y2982_ORYSJ^Y2982_ORYSJ^Q:567-283,H:962-1047^35.71%ID^E:4e-09^RecName: Full=B3 domain-containing protein Os02g0598200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42350_c0_g1_i3.p1","271-927[-]","Y2982_ORYSJ^Y2982_ORYSJ^Q:121-215,H:962-1047^35.71%ID^E:8e-10^RecName: Full=B3 domain-containing protein Os02g0598200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02362.18^B3^B3 DNA binding domain^147-214^E:2.4e-08",".",".","ENOG410YW9B^B3 domain-containing protein","KEGG:osa:4329874","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN47336_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.39325374539712,"0.00190092405173513","0.00276421875145574","TRINITY_DN47336_c1_g3_i1","R1B17_SOLDE^R1B17_SOLDE^Q:1018-206,H:791-1055^35%ID^E:2e-31^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47336_c1_g3_i1.p1","2-1018[-]","R1B17_SOLDE^R1B17_SOLDE^Q:1-271,H:791-1055^35%ID^E:2e-31^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN47129_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.39496594303913,"0.0154564638056711","0.0205768434278627","TRINITY_DN47129_c0_g1_i2","AB5C_ARATH^AB5C_ARATH^Q:1-1542,H:728-1242^81.17%ID^E:0^RecName: Full=ABC transporter C family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB5C_ARATH^AB5C_ARATH^Q:43-321,H:1400-1491^34.41%ID^E:5e-06^RecName: Full=ABC transporter C family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47129_c0_g1_i2.p1","1-1545[+]","AB5C_ARATH^AB5C_ARATH^Q:1-514,H:728-1242^81.17%ID^E:0^RecName: Full=ABC transporter C family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB5C_ARATH^AB5C_ARATH^Q:15-107,H:1400-1491^34.41%ID^E:5e-06^RecName: Full=ABC transporter C family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^9-47^E:3e-08`PF00664.20^ABC_membrane^ABC transporter transmembrane region^223-465^E:1.8e-28",".",".","COG1132^(ABC) transporter",".","GO:0016021^cellular_component^integral component of membrane`GO:0000325^cellular_component^plant-type vacuole`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0008281^molecular_function^sulfonylurea receptor activity`GO:0008559^molecular_function^xenobiotic-transporting ATPase activity`GO:1901527^biological_process^abscisic acid-activated signaling pathway involved in stomatal movement`GO:0030007^biological_process^cellular potassium ion homeostasis`GO:0009651^biological_process^response to salt stress","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN42655_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.39523794145234,"0.00279395702304919","0.00400496912328724","TRINITY_DN42655_c0_g2_i1","C90D2_ORYSJ^C90D2_ORYSJ^Q:380-3,H:41-166^64.57%ID^E:4e-50^RecName: Full=Cytochrome P450 90D2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42655_c0_g2_i1.p1","3-614[-]","C90D2_ORYSJ^C90D2_ORYSJ^Q:79-204,H:41-166^64.57%ID^E:3e-50^RecName: Full=Cytochrome P450 90D2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".",".",".","COG2124^Cytochrome p450","KEGG:osa:4327329`KO:K09589","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0010268^biological_process^brassinosteroid homeostasis`GO:0007275^biological_process^multicellular organism development`GO:0016125^biological_process^sterol metabolic process",".",".","."]
["TRINITY_DN46917_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.39764548278546,{"v":6198679877.64436,"d":"6.20E+09"},"0.000100734985809813","TRINITY_DN46917_c2_g1_i1","BCCP2_ARATH^BCCP2_ARATH^Q:131-766,H:43-255^53.99%ID^E:2e-48^RecName: Full=Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46917_c2_g1_i1.p1","272-769[+]","BCCP2_ARATH^BCCP2_ARATH^Q:1-165,H:90-255^67.07%ID^E:2e-65^RecName: Full=Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00364.19^Biotin_lipoyl^Biotin-requiring enzyme^91-163^E:1.1e-25",".",".","COG0511^Acetyl-CoA carboxylase, biotin carboxyl carrier protein","KEGG:ath:AT5G15530`KO:K02160","GO:0009317^cellular_component^acetyl-CoA carboxylase complex`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0003989^molecular_function^acetyl-CoA carboxylase activity`GO:0006633^biological_process^fatty acid biosynthetic process",".",".","."]
["TRINITY_DN14514_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.40312694272513,"0.000113842076234362","0.00018168420407539","TRINITY_DN14514_c0_g1_i2","NPC3_ARATH^NPC3_ARATH^Q:1789-611,H:15-407^69.44%ID^E:0^RecName: Full=Non-specific phospholipase C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NPC3_ARATH^NPC3_ARATH^Q:564-205,H:398-521^38.71%ID^E:4e-14^RecName: Full=Non-specific phospholipase C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN14514_c0_g1_i2.p1","539-1813[-]","NPC3_ARATH^NPC3_ARATH^Q:9-401,H:15-407^69.44%ID^E:0^RecName: Full=Non-specific phospholipase C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04185.11^Phosphoesterase^Phosphoesterase family^10-375^E:4.1e-103",".",".","COG3511^phospholipase C","KEGG:ath:AT3G03520`KO:K01114","GO:0016020^cellular_component^membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0052642^molecular_function^lysophosphatidic acid phosphatase activity`GO:0016036^biological_process^cellular response to phosphate starvation`GO:0016311^biological_process^dephosphorylation`GO:0006796^biological_process^phosphate-containing compound metabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN47206_c5_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.40677179285663,"0.00109911454846842","0.00162862844592591","TRINITY_DN47206_c5_g3_i8","MAD27_ORYSJ^MAD27_ORYSJ^Q:304-5,H:1-100^78%ID^E:2e-50^RecName: Full=MADS-box transcription factor 27;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47206_c5_g3_i8.p1","2-304[-]","MAD27_ORYSJ^MAD27_ORYSJ^Q:1-100,H:1-100^78%ID^E:2e-51^RecName: Full=MADS-box transcription factor 27;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00319.15^SRF-TF^SRF-type transcription factor (DNA-binding and dimerisation domain)^10-57^E:2.9e-25",".",".","COG5068^Transcription factor","KEGG:osa:4329771`KO:K09264","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN45371_c1_g7","leaves S. abrotanoides","roots S. abrotanoides",-1.41137286793775,{"v":6488350761.16351,"d":"6.49E+09"},"0.000105236337672772","TRINITY_DN45371_c1_g7_i1","H32_TOBAC^H32_TOBAC^Q:650-270,H:1-127^100%ID^E:7e-70^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45371_c1_g7_i1.p1","240-650[-]","H32_TOBAC^H32_TOBAC^Q:1-136,H:1-136^100%ID^E:3e-93^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^1-132^E:8.3e-55",".",".",".",".","GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN43866_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.41537987339837,"0.00913444266939299","0.0124634233701723","TRINITY_DN43866_c1_g2_i1","TBL7_ARATH^TBL7_ARATH^Q:1796-1008,H:33-299^62.55%ID^E:2e-141^RecName: Full=Protein trichome berefringence-like 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TBL7_ARATH^TBL7_ARATH^Q:1017-595,H:302-440^61.7%ID^E:2e-141^RecName: Full=Protein trichome berefringence-like 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43866_c1_g2_i1.p1","981-1826[-]","TBL7_ARATH^TBL7_ARATH^Q:11-273,H:33-299^62.55%ID^E:3e-111^RecName: Full=Protein trichome berefringence-like 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14416.3^PMR5N^PMR5 N terminal Domain^88-140^E:1.8e-23`PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^141-270^E:4e-39",".",".","ENOG410Y13E^powdery mildew resistant protein 5","KEGG:ath:AT1G48880","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:0071554^biological_process^cell wall organization or biogenesis",".",".","."]
["TRINITY_DN42448_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.41549163132231,"0.00481273239901177","0.00675450009134024","TRINITY_DN42448_c0_g1_i7","SRS2L_ARATH^SRS2L_ARATH^Q:2065-3642,H:617-1147^62.38%ID^E:0^RecName: Full=ATP-dependent DNA helicase SRS2-like protein At4g25120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SRS2L_ARATH^SRS2L_ARATH^Q:150-2093,H:6-616^49.62%ID^E:0^RecName: Full=ATP-dependent DNA helicase SRS2-like protein At4g25120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42448_c0_g1_i7.p1","120-2126[+]","SRS2L_ARATH^SRS2L_ARATH^Q:11-658,H:6-616^49.62%ID^E:0^RecName: Full=ATP-dependent DNA helicase SRS2-like protein At4g25120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00580.18^UvrD-helicase^UvrD/REP helicase N-terminal domain^296-575^E:6.8e-59`PF13245.3^AAA_19^Part of AAA domain^312-379^E:1.7e-09`PF13361.3^UvrD_C^UvrD-like helicase C-terminal domain^581-645^E:1.2e-06",".",".","COG0210^helicase","KEGG:ath:AT4G25120","GO:0005634^cellular_component^nucleus`GO:0043138^molecular_function^3'-5' DNA helicase activity`GO:0005524^molecular_function^ATP binding`GO:0004003^molecular_function^ATP-dependent DNA helicase activity`GO:0003677^molecular_function^DNA binding`GO:0032508^biological_process^DNA duplex unwinding","GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN47404_c7_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.41656843732349,"0.000127037853779452","0.000202013795008288","TRINITY_DN47404_c7_g1_i7","POLX_TOBAC^POLX_TOBAC^Q:944-192,H:1060-1327^28.11%ID^E:5e-26^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:1397-1287,H:905-941^51.35%ID^E:5e-26^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:1282-965,H:944-1050^39.09%ID^E:5e-26^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47404_c7_g1_i7.p1","866-1306[-]","POLX_TOBAC^POLX_TOBAC^Q:9-114,H:944-1050^39.09%ID^E:4e-11^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF07727.11^RVT_2^Reverse transcriptase (RNA-dependent DNA polymerase)^7-126^E:9.3e-30",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration",".",".","."]
["TRINITY_DN40144_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.41833018638758,"0.000237949764834953","0.000371079128109546","TRINITY_DN40144_c0_g1_i3","CDT1A_ARATH^CDT1A_ARATH^Q:1455-1084,H:107-232^50%ID^E:2e-24^RecName: Full=CDT1-like protein a, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CDT1A_ARATH^CDT1A_ARATH^Q:591-334,H:464-549^37.21%ID^E:2e-11^RecName: Full=CDT1-like protein a, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40144_c0_g1_i3.p1","295-1632[-]","CDT1B_ARATH^CDT1B_ARATH^Q:37-438,H:16-470^28.76%ID^E:5e-36^RecName: Full=CDT1-like protein b;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08839.8^CDT1^DNA replication factor CDT1 like^64-138^E:6.6e-13",".",".","ENOG410XT37^Chromatin licensing and DNA replication factor 1","KEGG:ath:AT3G54710`KO:K10727","GO:0005634^cellular_component^nucleus`GO:0004693^molecular_function^cyclin-dependent protein serine/threonine kinase activity`GO:0070182^molecular_function^DNA polymerase binding`GO:0007049^biological_process^cell cycle`GO:0009658^biological_process^chloroplast organization`GO:0051276^biological_process^chromosome organization`GO:0006260^biological_process^DNA replication`GO:0048229^biological_process^gametophyte development`GO:0051726^biological_process^regulation of cell cycle",".",".","."]
["TRINITY_DN47160_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.4202380880174,"0.00146417759700136","0.00214760164650963","TRINITY_DN47160_c0_g1_i1","Y5977_ARATH^Y5977_ARATH^Q:3086-444,H:24-911^49.38%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47160_c0_g1_i1.p1","291-3146[-]","Y5977_ARATH^Y5977_ARATH^Q:16-901,H:19-911^49.44%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g49770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^90-112^E:0.98`PF00560.30^LRR_1^Leucine Rich Repeat^266-282^E:1.2`PF00069.22^Pkinase^Protein kinase domain^627-892^E:6.5e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^629-892^E:3.5e-47","sigP:1^22^0.869^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G49770","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN41829_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.42531841738394,"0.000848420146708814","0.00126973213517667","TRINITY_DN41829_c1_g1_i7","AKT1_ARATH^AKT1_ARATH^Q:95-2731,H:2-856^69.95%ID^E:0^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41829_c1_g1_i7.p1","71-2755[+]","AKT1_ARATH^AKT1_ARATH^Q:9-887,H:2-856^69.95%ID^E:0^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00520.28^Ion_trans^Ion transport protein^75-319^E:5.9e-38`PF07885.13^Ion_trans_2^Ion channel^219-312^E:5.1e-13`PF00027.26^cNMP_binding^Cyclic nucleotide-binding domain^412-496^E:2.4e-14`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^542-632^E:9.8e-13`PF13637.3^Ank_4^Ankyrin repeats (many copies)^542-591^E:1.7e-08`PF13857.3^Ank_5^Ankyrin repeats (many copies)^557-608^E:9e-09`PF13606.3^Ank_3^Ankyrin repeat^570-598^E:5.4e-05`PF00023.27^Ank^Ankyrin repeat^570-601^E:4.4e-07`PF13637.3^Ank_4^Ankyrin repeats (many copies)^641-688^E:5.6e-05`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^642-726^E:6.5e-12`PF13606.3^Ank_3^Ankyrin repeat^667-695^E:1.7e-05`PF00023.27^Ank^Ankyrin repeat^667-694^E:7e-05`PF13637.3^Ank_4^Ankyrin repeats (many copies)^670-704^E:4.3e-05`PF11834.5^KHA^KHA, dimerisation domain of potassium ion channel^822-884^E:4.9e-22",".",".","ENOG410XPSE^Potassium voltage-gated channel, subfamily H (Eag-related), member","KEGG:ath:AT2G26650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0042802^molecular_function^identical protein binding`GO:0005242^molecular_function^inward rectifier potassium channel activity`GO:0010107^biological_process^potassium ion import`GO:0006813^biological_process^potassium ion transport`GO:0042391^biological_process^regulation of membrane potential`GO:0090333^biological_process^regulation of stomatal closure`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0048767^biological_process^root hair elongation","GO:0005216^molecular_function^ion channel activity`GO:0006811^biological_process^ion transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN88071_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.42670191334689,"0.029546903335769","0.0380834480604078","TRINITY_DN88071_c0_g1_i1","DET2_GOSHI^DET2_GOSHI^Q:710-994,H:163-258^39.6%ID^E:1e-13^RecName: Full=Steroid 5-alpha-reductase DET2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium",".","TRINITY_DN88071_c0_g1_i1.p1","200-997[+]","DET2_GOSHI^DET2_GOSHI^Q:160-265,H:152-258^38.39%ID^E:6e-16^RecName: Full=Steroid 5-alpha-reductase DET2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium","PF02544.13^Steroid_dh^3-oxo-5-alpha-steroid 4-dehydrogenase^126-265^E:2.4e-26",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016021^cellular_component^integral component of membrane`GO:0003865^molecular_function^3-oxo-5-alpha-steroid 4-dehydrogenase activity`GO:0047751^molecular_function^cholestenone 5-alpha-reductase activity`GO:0050213^molecular_function^progesterone 5-alpha-reductase activity`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process`GO:0090378^biological_process^seed trichome elongation`GO:0090377^biological_process^seed trichome initiation","GO:0016627^molecular_function^oxidoreductase activity, acting on the CH-CH group of donors`GO:0006629^biological_process^lipid metabolic process`GO:0005737^cellular_component^cytoplasm`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN4931_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.43239349983148,"0.0289540332556876","0.0373614953414303","TRINITY_DN4931_c0_g1_i1","PME68_ARATH^PME68_ARATH^Q:1223-144,H:3-362^73.61%ID^E:0^RecName: Full=Probable pectinesterase 68;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN4931_c0_g1_i1.p1","141-1220[-]","PME68_ARATH^PME68_ARATH^Q:1-359,H:4-362^74.72%ID^E:0^RecName: Full=Probable pectinesterase 68;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01095.16^Pectinesterase^Pectinesterase^58-350^E:9.8e-62","sigP:1^34^0.674^YES",".","COG4677^pectinesterase","KEGG:ath:AT5G47500","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0045330^molecular_function^aspartyl esterase activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0045490^biological_process^pectin catabolic process","GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0005618^cellular_component^cell wall",".","."]
["TRINITY_DN45816_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.43304392800048,"0.000645207791883839","0.000973857621274124","TRINITY_DN45816_c1_g3_i7","RNG1A_ARATH^RNG1A_ARATH^Q:258-1445,H:107-519^46.27%ID^E:9e-89^RecName: Full=Putative E3 ubiquitin-protein ligase RING1a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45816_c1_g3_i7.p1","120-1466[+]","RNG1A_ARATH^RNG1A_ARATH^Q:50-442,H:113-519^47.57%ID^E:6e-111^RecName: Full=Putative E3 ubiquitin-protein ligase RING1a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^74-114^E:8.6e-12`PF13639.3^zf-RING_2^Ring finger domain^74-115^E:1.3e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^75-114^E:2.5e-08`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^75-109^E:0.00025",".",".",".",".","GO:0005634^cellular_component^nucleus`GO:0035102^cellular_component^PRC1 complex`GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0001709^biological_process^cell fate determination`GO:0016568^biological_process^chromatin modification`GO:0010076^biological_process^maintenance of floral meristem identity`GO:0010077^biological_process^maintenance of inflorescence meristem identity`GO:0010492^biological_process^maintenance of shoot apical meristem identity`GO:0045814^biological_process^negative regulation of gene expression, epigenetic`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0016567^biological_process^protein ubiquitination`GO:0006351^biological_process^transcription, DNA-templated","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47053_c10_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.43366234460163,"0.00332853546203472","0.00474221053886039","TRINITY_DN47053_c10_g1_i1","MIZ1_ARATH^MIZ1_ARATH^Q:303-761,H:129-296^45.24%ID^E:4e-37^RecName: Full=Protein MIZU-KUSSEI 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47053_c10_g1_i1.p1","111-767[+]","MIZ1_ARATH^MIZ1_ARATH^Q:53-217,H:118-296^44.44%ID^E:2e-38^RecName: Full=Protein MIZU-KUSSEI 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04759.10^DUF617^Protein of unknown function, DUF617^65-217^E:6.3e-61",".",".","ENOG4111IZ9^DUF617 domain containing protein","KEGG:ath:AT2G41660","GO:0032541^cellular_component^cortical endoplasmic reticulum`GO:0005737^cellular_component^cytoplasm`GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016020^cellular_component^membrane`GO:0009658^biological_process^chloroplast organization`GO:0010274^biological_process^hydrotropism",".",".","."]
["TRINITY_DN45572_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.43600708313978,"0.00622383999543256","0.00863579481099213","TRINITY_DN45572_c2_g3_i1","R1B17_SOLDE^R1B17_SOLDE^Q:651-1829,H:627-1023^34.4%ID^E:6e-58^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1B17_SOLDE^R1B17_SOLDE^Q:290-607,H:495-602^33.64%ID^E:6e-58^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45572_c2_g3_i1.p1","1110-1916[+]","R1B12_SOLDE^R1B12_SOLDE^Q:2-237,H:805-1056^34.38%ID^E:1e-26^RecName: Full=Putative late blight resistance protein homolog R1B-12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-43^E:1.9e-06",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45498_c6_g5","leaves S. abrotanoides","roots S. abrotanoides",-1.43868924652153,"0.00123914211729355","0.00182810347491241","TRINITY_DN45498_c6_g5_i1","R1A6_SOLDE^R1A6_SOLDE^Q:2-460,H:471-633^32.32%ID^E:7e-13^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45498_c6_g5_i1.p1","41-475[+]","R1A3_SOLDE^R1A3_SOLDE^Q:26-140,H:9-129^34.71%ID^E:1e-12^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^44-140^E:6e-17",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN40204_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.44117812131489,"0.029398108728686","0.0379059382830724","TRINITY_DN40204_c0_g2_i4","CLPB1_ARATH^CLPB1_ARATH^Q:1956-2651,H:566-782^30.86%ID^E:2e-17^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPB1_ARATH^CLPB1_ARATH^Q:87-1676,H:345-862^25.18%ID^E:3e-16^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40204_c0_g2_i4.p1","81-2795[+]","CLPB1_ARATH^CLPB1_ARATH^Q:3-532,H:345-862^24.65%ID^E:6e-25^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPB1_ARATH^CLPB1_ARATH^Q:626-857,H:566-782^30.08%ID^E:6e-24^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^255-367^E:6e-07`PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^722-836^E:3.2e-05",".",".","COG0542^ATP-dependent CLP protease ATP-binding subunit","KEGG:ath:AT1G74310`KO:K03695","GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0045727^biological_process^positive regulation of translation`GO:0019538^biological_process^protein metabolic process`GO:0043335^biological_process^protein unfolding`GO:0009408^biological_process^response to heat`GO:0009644^biological_process^response to high light intensity`GO:0042542^biological_process^response to hydrogen peroxide","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN45664_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.4417652189598,"0.0345552656045182","0.0442120754157799","TRINITY_DN45664_c0_g3_i1","Y5270_ARATH^Y5270_ARATH^Q:261-653,H:74-203^58.02%ID^E:1e-45^RecName: Full=B3 domain-containing protein At5g42700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45664_c0_g3_i1.p1","318-701[+]","Y5270_ARATH^Y5270_ARATH^Q:1-112,H:93-203^58.04%ID^E:3e-40^RecName: Full=B3 domain-containing protein At5g42700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02362.18^B3^B3 DNA binding domain^18-103^E:1.4e-13",".",".","ENOG4111SA1^B3 domain-containing protein","KEGG:ath:AT5G42700","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN45018_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.44250467646467,"0.0162226756772084","0.0215486552543777","TRINITY_DN45018_c0_g3_i1","WEB1_ARATH^WEB1_ARATH^Q:1-414,H:649-800^50.33%ID^E:2e-20^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45018_c0_g3_i1.p1","1-453[+]","WEB1_ARATH^WEB1_ARATH^Q:1-142,H:649-804^49.68%ID^E:5e-32^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05701.8^WEMBL^Weak chloroplast movement under blue light^1-80^E:2.6e-28",".",".","ENOG410YG1U^Pfam:DUF827","KEGG:ath:AT2G26570","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0009904^biological_process^chloroplast accumulation movement`GO:0009903^biological_process^chloroplast avoidance movement",".",".","."]
["TRINITY_DN44024_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.44385814372087,"0.0114862508583676","0.0155215163469542","TRINITY_DN44024_c3_g2_i5","R1A6_SOLDE^R1A6_SOLDE^Q:1000-5,H:523-844^38.92%ID^E:4e-55^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44024_c3_g2_i5.p1","260-1462[-]","R1A6_SOLDE^R1A6_SOLDE^Q:119-388,H:484-749^36.5%ID^E:2e-41^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^162-397^E:1.9e-57",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45447_c8_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.4444928872146,"0.00183088535626383","0.0026653446948736","TRINITY_DN45447_c8_g2_i1","UGT9_GARJA^UGT9_GARJA^Q:305-1486,H:5-398^46.73%ID^E:7e-91^RecName: Full=Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae; Gardenia",".","TRINITY_DN45447_c8_g2_i1.p1","533-1627[+]","UGT9_GARJA^UGT9_GARJA^Q:1-356,H:79-438^42.78%ID^E:3e-89^RecName: Full=Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae; Gardenia","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^174-319^E:7.2e-15",".",".",".",".","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44437_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.44514539522159,"0.000822731029007253","0.00123256613236162","TRINITY_DN44437_c1_g1_i9","RCH2_ARATH^RCH2_ARATH^Q:692-258,H:526-668^36.3%ID^E:4e-11^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44437_c1_g1_i9.p1","168-692[-]","RCH2_ARATH^RCH2_ARATH^Q:1-145,H:526-668^38.1%ID^E:8e-15^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:1-164,H:189-351^32.53%ID^E:6e-10^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:1-124,H:454-576^37.8%ID^E:7e-09^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:3-147,H:360-502^38%ID^E:2e-07^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:3-103,H:576-675^37.14%ID^E:5e-07^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:1-147,H:286-430^33.56%ID^E:2e-06^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^38-97^E:5.6e-09`PF13855.3^LRR_8^Leucine rich repeat^76-122^E:3.9e-08",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G24240","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0016032^biological_process^viral process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45003_c4_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.45056357081595,"0.000322636648662305","0.000497873167107348","TRINITY_DN45003_c4_g4_i1","GONS1_ARATH^GONS1_ARATH^Q:1197-205,H:3-330^78.31%ID^E:9e-170^RecName: Full=GDP-mannose transporter GONST1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45003_c4_g4_i1.p1","202-1317[-]","GONS1_ARATH^GONS1_ARATH^Q:41-371,H:3-330^78.31%ID^E:3e-179^RecName: Full=GDP-mannose transporter GONST1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03151.13^TPT^Triose-phosphate Transporter family^75-358^E:9.7e-13",".",".","COG5070^Solute carrier family 35","KEGG:ath:AT2G13650`KO:K15356","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005458^molecular_function^GDP-mannose transmembrane transporter activity`GO:0005338^molecular_function^nucleotide-sugar transmembrane transporter activity`GO:0008643^biological_process^carbohydrate transport`GO:1990570^biological_process^GDP-mannose transmembrane transport`GO:0015784^biological_process^GDP-mannose transport`GO:1901679^biological_process^nucleotide transmembrane transport",".",".","."]
["TRINITY_DN46394_c1_g6","leaves S. abrotanoides","roots S. abrotanoides",-1.4566439665335,"0.00285772531988299","0.00409316311509341","TRINITY_DN46394_c1_g6_i3","SCC12_ARATH^SCC12_ARATH^Q:2743-2309,H:1-146^53.42%ID^E:3e-37^RecName: Full=Sister chromatid cohesion 1 protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SCC12_ARATH^SCC12_ARATH^Q:1219-257,H:431-800^26.65%ID^E:6e-19^RecName: Full=Sister chromatid cohesion 1 protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46394_c1_g6_i3.p1","221-2743[-]","SCC12_ARATH^SCC12_ARATH^Q:1-146,H:1-147^53.74%ID^E:2e-38^RecName: Full=Sister chromatid cohesion 1 protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SCC12_ARATH^SCC12_ARATH^Q:509-829,H:431-800^26.65%ID^E:4e-19^RecName: Full=Sister chromatid cohesion 1 protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04825.10^Rad21_Rec8_N^N terminus of Rad21 / Rec8 like protein^1-93^E:1.2e-27`PF04824.13^Rad21_Rec8^Conserved region of Rad21 / Rec8 like protein^782-834^E:8.9e-17",".",".","ENOG410XRB4^Doublestrandbreak repair protein rad21",".","GO:0000798^cellular_component^nuclear cohesin complex`GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0007059^biological_process^chromosome segregation`GO:0006302^biological_process^double-strand break repair`GO:0007067^biological_process^mitotic nuclear division","GO:0005515^molecular_function^protein binding`GO:0000228^cellular_component^nuclear chromosome",".","."]
["TRINITY_DN46731_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.4649617509508,"0.00425592865032171","0.00600165280830978","TRINITY_DN46731_c1_g3_i4",".",".","TRINITY_DN46731_c1_g3_i4.p1","2-529[+]","R1A3_SOLDE^R1A3_SOLDE^Q:13-123,H:593-699^38.74%ID^E:1e-09^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN43681_c4_g14","leaves S. abrotanoides","roots S. abrotanoides",-1.46632808191472,"0.0274308025122258","0.0355013548157802","TRINITY_DN43681_c4_g14_i1","ERF61_ARATH^ERF61_ARATH^Q:278-580,H:17-146^35.21%ID^E:1e-08^RecName: Full=Ethylene-responsive transcription factor ERF061;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43681_c4_g14_i1.p1","230-580[+]","ERF61_ARATH^ERF61_ARATH^Q:17-117,H:17-146^35.21%ID^E:2e-09^RecName: Full=Ethylene-responsive transcription factor ERF061;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YMKN^Transcription factor","KEGG:ath:AT1G64380","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0010200^biological_process^response to chitin`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46066_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.47658602429775,"0.00749846819473063","0.0103175998480634","TRINITY_DN46066_c2_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:2440-1622,H:481-749^35.38%ID^E:8e-81^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:1580-90,H:760-1256^29.46%ID^E:8e-81^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46066_c2_g1_i1.p2","1613-2773[-]","R1A6_SOLDE^R1A6_SOLDE^Q:160-384,H:526-749^39.3%ID^E:1e-43^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^169-384^E:4e-59",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN32038_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.47766575426309,"0.0107075889447879","0.0145180188193269","TRINITY_DN32038_c0_g1_i2","SM3L3_ARATH^SM3L3_ARATH^Q:2559-70,H:369-1186^66.59%ID^E:0^RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32038_c0_g1_i2.p1","46-3609[-]","SM3L3_ARATH^SM3L3_ARATH^Q:351-1180,H:369-1186^66.59%ID^E:0^RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08797.8^HIRAN^HIRAN domain^382-486^E:5.1e-13`PF04851.12^ResIII^Type III restriction enzyme, res subunit^610-847^E:1.5e-06`PF00176.20^SNF2_N^SNF2 family N-terminal domain^615-982^E:3e-86`PF00270.26^DEAD^DEAD/DEAH box helicase^682-827^E:3.5e-06`PF13920.3^zf-C3HC4_3^Zinc finger, C3HC4 type (RING finger)^1031-1079^E:3.7e-10`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^1033-1073^E:1.1e-07`PF13639.3^zf-RING_2^Ring finger domain^1033-1074^E:4.3e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^1034-1073^E:1.6e-07`PF14447.3^Prok-RING_4^Prokaryotic RING finger family 4^1034-1081^E:1.4e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^1034-1086^E:1.2e-06`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^1107-1171^E:0.00024",".",".","ENOG410XPDU^Transcription termination factor, RNA polymerase II","KEGG:ath:AT5G43530`KO:K15505","GO:0009941^cellular_component^chloroplast envelope`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding`GO:0016568^biological_process^chromatin modification`GO:0006281^biological_process^DNA repair","GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding`GO:0016818^molecular_function^hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides`GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity`GO:0005515^molecular_function^protein binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN43370_c3_g8","leaves S. abrotanoides","roots S. abrotanoides",-1.47855790498117,"0.000170333492367162","0.00026847648773902","TRINITY_DN43370_c3_g8_i2","PTI5_SOLLC^PTI5_SOLLC^Q:162-497,H:9-131^60.98%ID^E:7e-33^RecName: Full=Pathogenesis-related genes transcriptional activator PTI5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN43370_c3_g8_i2.p1","132-551[+]","PTI5_SOLLC^PTI5_SOLLC^Q:11-122,H:9-131^60.98%ID^E:5e-46^RecName: Full=Pathogenesis-related genes transcriptional activator PTI5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00847.17^AP2^AP2 domain^51-101^E:1.8e-14",".",".","ENOG410YP8B^Transcription factor","KEGG:sly:544042`KO:K13433","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006952^biological_process^defense response`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47687_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.48064242661108,"0.000526883665809119","0.000800557952549723","TRINITY_DN47687_c1_g2_i1","LPXC5_ARATH^LPXC5_ARATH^Q:511-936,H:183-324^61.27%ID^E:2e-85^RecName: Full=Probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LPXC5_ARATH^LPXC5_ARATH^Q:116-529,H:21-157^57.25%ID^E:2e-85^RecName: Full=Probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47687_c1_g2_i1.p2","499-972[+]","LPXC5_ARATH^LPXC5_ARATH^Q:9-146,H:187-324^63.04%ID^E:3e-59^RecName: Full=Probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03331.10^LpxC^UDP-3-O-acyl N-acetylglycosamine deacetylase^6-146^E:9.9e-45",".",".","COG0774^involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)","KEGG:ath:AT1G25054`KEGG:ath:AT1G25145`KO:K02535","GO:0005739^cellular_component^mitochondrion`GO:0008759^molecular_function^UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity`GO:0009245^biological_process^lipid A biosynthetic process`GO:2001289^biological_process^lipid X metabolic process","GO:0008759^molecular_function^UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity`GO:0009245^biological_process^lipid A biosynthetic process",".","."]
["TRINITY_DN47277_c3_g5","leaves S. abrotanoides","roots S. abrotanoides",-1.48106382765024,"0.00250585737991853","0.00360653277800426","TRINITY_DN47277_c3_g5_i1","LRP1_ARATH^LRP1_ARATH^Q:1076-441,H:112-306^54.13%ID^E:2e-58^RecName: Full=Protein LATERAL ROOT PRIMORDIUM 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47277_c3_g5_i1.p1","378-1502[-]","LRP1_ARATH^LRP1_ARATH^Q:22-354,H:8-306^45.75%ID^E:2e-70^RecName: Full=Protein LATERAL ROOT PRIMORDIUM 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05142.9^DUF702^Domain of unknown function (DUF702)^141-321^E:2.1e-60",".",".","ENOG4111TEK^Domain of unknown function (DUF702)","KEGG:ath:AT5G12330","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0009851^biological_process^auxin biosynthetic process`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0007275^biological_process^multicellular organism development",".",".","."]
["TRINITY_DN45364_c2_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.48234167190059,"0.000398626736426016","0.000610355397201611","TRINITY_DN45364_c2_g3_i1","FACR3_ARATH^FACR3_ARATH^Q:997-200,H:231-493^53.01%ID^E:6e-101^RecName: Full=Fatty acyl-CoA reductase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FACR3_ARATH^FACR3_ARATH^Q:1268-1074,H:167-231^55.38%ID^E:6e-101^RecName: Full=Fatty acyl-CoA reductase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45364_c2_g3_i1.p1","191-949[-]","FACR1_ARATH^FACR1_ARATH^Q:1-252,H:241-491^51.78%ID^E:4e-92^RecName: Full=Fatty acyl-CoA reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07993.9^NAD_binding_4^Male sterility protein^1-76^E:7.7e-17`PF03015.16^Sterile^Male sterility protein^150-251^E:8.8e-21",".",".","ENOG410XS7R^fatty-acyl-CoA reductase (alcohol-forming) activity","KEGG:ath:AT5G22500`KO:K13356","GO:0009507^cellular_component^chloroplast`GO:0005886^cellular_component^plasma membrane`GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity`GO:0050062^molecular_function^long-chain-fatty-acyl-CoA reductase activity`GO:0006629^biological_process^lipid metabolic process`GO:0009651^biological_process^response to salt stress`GO:0009611^biological_process^response to wounding`GO:0010345^biological_process^suberin biosynthetic process","GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity",".","."]
["TRINITY_DN44166_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.49081206705009,"0.0196896851865727","0.0258938934523062","TRINITY_DN44166_c5_g1_i3","PAO1_ARATH^PAO1_ARATH^Q:950-90,H:20-309^68.97%ID^E:7e-142^RecName: Full=Polyamine oxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44166_c5_g1_i3.p1","36-1022[-]","PAO1_ARATH^PAO1_ARATH^Q:25-311,H:20-309^68.97%ID^E:8e-149^RecName: Full=Polyamine oxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13450.3^NAD_binding_8^NAD(P)-binding Rossmann-like domain^13-80^E:5.4e-12`PF01593.21^Amino_oxidase^Flavin containing amine oxidoreductase^18-116^E:3.5e-16`PF01593.21^Amino_oxidase^Flavin containing amine oxidoreductase^171-293^E:2.4e-25",".",".","ENOG410XSNC^amine oxidase","KEGG:ath:AT5G13700`KO:K13366","GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0052895^molecular_function^N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity`GO:0052894^molecular_function^norspermine:oxygen oxidoreductase activity`GO:0046592^molecular_function^polyamine oxidase activity`GO:0052901^molecular_function^spermine:oxygen oxidoreductase (spermidine-forming) activity`GO:0006598^biological_process^polyamine catabolic process`GO:0046208^biological_process^spermine catabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN38450_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.5025103838314,"0.00148274152501693","0.0021735498490117","TRINITY_DN38450_c0_g1_i2","NEK1_ARATH^NEK1_ARATH^Q:1476-517,H:1-319^76.95%ID^E:7e-176^RecName: Full=Serine/threonine-protein kinase Nek1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38450_c0_g1_i2.p1","208-1476[-]","NEK1_ARATH^NEK1_ARATH^Q:1-386,H:1-375^68.22%ID^E:0^RecName: Full=Serine/threonine-protein kinase Nek1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^4-257^E:4.1e-63`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^6-254^E:3.8e-40",".",".","ENOG410Y7JF^NIMA-related kinase","KEGG:ath:AT1G54510`KO:K08857","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006468^biological_process^protein phosphorylation","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44548_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.50738768443381,"0.0254366445561456","0.0330673964052856","TRINITY_DN44548_c0_g3_i2","FBL42_ARATH^FBL42_ARATH^Q:242-1126,H:50-340^26.86%ID^E:5e-11^RecName: Full=F-box/LRR-repeat protein At3g03360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44548_c0_g3_i2.p1","260-1192[+]","FBL42_ARATH^FBL42_ARATH^Q:2-289,H:57-340^27.48%ID^E:9e-14^RecName: Full=F-box/LRR-repeat protein At3g03360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZQIV^F-box protein","KEGG:ath:AT3G03360",".",".",".","."]
["TRINITY_DN43534_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.51267382816879,"0.0150885369281658","0.0201124181815686","TRINITY_DN43534_c2_g4_i4","SOT6_ARATH^SOT6_ARATH^Q:1063-404,H:34-256^38.12%ID^E:2e-53^RecName: Full=Cytosolic sulfotransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SOT6_ARATH^SOT6_ARATH^Q:410-198,H:258-329^56.94%ID^E:2e-53^RecName: Full=Cytosolic sulfotransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43534_c2_g4_i4.p1","350-1138[-]","SOT13_ARATH^SOT13_ARATH^Q:29-251,H:39-262^37.5%ID^E:4e-51^RecName: Full=Cytosolic sulfotransferase 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00685.24^Sulfotransfer_1^Sulfotransferase domain^56-243^E:2.1e-46`PF13469.3^Sulfotransfer_3^Sulfotransferase family^144-240^E:1.7e-07",".",".","ENOG4111H56^Sulfotransferase","KEGG:ath:AT2G03770","GO:0005737^cellular_component^cytoplasm`GO:1990135^molecular_function^flavonoid sulfotransferase activity`GO:0008146^molecular_function^sulfotransferase activity`GO:0009812^biological_process^flavonoid metabolic process","GO:0008146^molecular_function^sulfotransferase activity",".","."]
["TRINITY_DN47643_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.51585910579976,"0.0182662689836499","0.0241157727968413","TRINITY_DN47643_c1_g3_i1","GLR22_ARATH^GLR22_ARATH^Q:126-479,H:21-140^45%ID^E:2e-16^RecName: Full=Glutamate receptor 2.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47643_c1_g3_i1.p1","54-479[+]","GLR22_ARATH^GLR22_ARATH^Q:25-142,H:21-140^45%ID^E:9e-24^RecName: Full=Glutamate receptor 2.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01094.25^ANF_receptor^Receptor family ligand binding region^55-138^E:2.7e-11","sigP:1^26^0.778^YES",".","ENOG410XQQV^glutamate receptor","KEGG:ath:AT2G24720`KO:K05387","GO:0016021^cellular_component^integral component of membrane`GO:0005622^cellular_component^intracellular`GO:0005886^cellular_component^plasma membrane`GO:0005262^molecular_function^calcium channel activity`GO:0008066^molecular_function^glutamate receptor activity`GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0019722^biological_process^calcium-mediated signaling`GO:0071230^biological_process^cellular response to amino acid stimulus",".",".","."]
["TRINITY_DN43872_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.51879275060075,"0.000327762074565517","0.000505326777086174","TRINITY_DN43872_c3_g1_i2","SCAM1_ORYSI^SCAM1_ORYSI^Q:172-1023,H:1-288^70.55%ID^E:2e-146^RecName: Full=Putative secretory carrier-associated membrane protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43872_c3_g1_i2.p1","172-1068[+]","SCAM1_ORYSI^SCAM1_ORYSI^Q:1-298,H:1-302^69.61%ID^E:4e-155^RecName: Full=Putative secretory carrier-associated membrane protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF04144.10^SCAMP^SCAMP family^111-283^E:2.1e-52",".",".","ENOG410XSJN^secretory carrier membrane protein",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0030658^cellular_component^transport vesicle membrane`GO:0015031^biological_process^protein transport","GO:0015031^biological_process^protein transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN41303_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.5232583630005,"0.0011094977129155","0.00164339134920566","TRINITY_DN41303_c0_g1_i1","SINA2_ARATH^SINA2_ARATH^Q:1138-242,H:1-306^74.84%ID^E:2e-168^RecName: Full=E3 ubiquitin-protein ligase SINAT2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41303_c0_g1_i1.p1","236-1138[-]","SINA2_ARATH^SINA2_ARATH^Q:1-299,H:1-306^74.84%ID^E:3e-171^RecName: Full=E3 ubiquitin-protein ligase SINAT2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03145.13^Sina^Seven in absentia protein family^95-294^E:7.3e-73",".",".","ENOG410XVP0^e3 ubiquitin-protein ligase","KEGG:ath:AT3G58040`KO:K04506","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0016874^molecular_function^ligase activity`GO:0061630^molecular_function^ubiquitin protein ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0007275^biological_process^multicellular organism development`GO:0043161^biological_process^proteasome-mediated ubiquitin-dependent protein catabolic process`GO:0042787^biological_process^protein ubiquitination involved in ubiquitin-dependent protein catabolic process","GO:0006511^biological_process^ubiquitin-dependent protein catabolic process`GO:0007275^biological_process^multicellular organism development`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN27493_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.5329247019991,"0.00639330024529452","0.00886104877344231","TRINITY_DN27493_c0_g1_i1","MENB_ARATH^MENB_ARATH^Q:1366-386,H:6-337^70.78%ID^E:1e-171^RecName: Full=1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN27493_c0_g1_i1.p1","383-1390[-]","MENB_ARATH^MENB_ARATH^Q:9-335,H:6-337^70.78%ID^E:4e-174^RecName: Full=1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00378.17^ECH_1^Enoyl-CoA hydratase/isomerase^81-329^E:1.9e-74`PF16113.2^ECH_2^Enoyl-CoA hydratase/isomerase^86-262^E:4.5e-20",".",".","COG0447^Naphthoate synthase","KEGG:ath:AT1G60550`KO:K01661","GO:0005777^cellular_component^peroxisome`GO:0008935^molecular_function^1,4-dihydroxy-2-naphthoyl-CoA synthase activity`GO:0016853^molecular_function^isomerase activity`GO:0009234^biological_process^menaquinone biosynthetic process`GO:0042372^biological_process^phylloquinone biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process`GO:0016836^molecular_function^hydro-lyase activity",".","."]
["TRINITY_DN41433_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.54361596880328,"0.00290855805523809","0.00416314072586821","TRINITY_DN41433_c0_g1_i4","TSO1_ARATH^TSO1_ARATH^Q:1433-486,H:404-661^36.88%ID^E:8e-48^RecName: Full=CRC domain-containing protein TSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41433_c0_g1_i4.p1","318-2564[-]","TSO1_ARATH^TSO1_ARATH^Q:229-726,H:309-693^31.88%ID^E:1e-58^RecName: Full=CRC domain-containing protein TSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^375-410^E:8.8e-11`PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^463-498^E:1.9e-11",".",".","ENOG4110UR5^Tesmin TSO1-like CXC domain containing protein","KEGG:ath:AT3G22780","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0048444^biological_process^floral organ morphogenesis`GO:0051302^biological_process^regulation of cell division`GO:0009934^biological_process^regulation of meristem structural organization`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN39819_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.54466750434089,"0.0302269150192742","0.0389269441740482","TRINITY_DN39819_c0_g1_i4","TOP3A_ARATH^TOP3A_ARATH^Q:1481-432,H:563-918^57.54%ID^E:9e-117^RecName: Full=DNA topoisomerase 3-alpha;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39819_c0_g1_i4.p1","423-1448[-]","TOP3A_ARATH^TOP3A_ARATH^Q:1-339,H:574-918^57.14%ID^E:4e-117^RecName: Full=DNA topoisomerase 3-alpha;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01396.16^zf-C4_Topoisom^Topoisomerase DNA binding C4 zinc finger^66-104^E:7.6e-09`PF06839.9^zf-GRF^GRF zinc finger^232-271^E:1.3e-10",".",".","COG0550^Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity)","KEGG:ath:AT5G63920`KO:K03165","GO:0005694^cellular_component^chromosome`GO:0003677^molecular_function^DNA binding`GO:0003917^molecular_function^DNA topoisomerase type I activity`GO:0008270^molecular_function^zinc ion binding`GO:0007059^biological_process^chromosome segregation`GO:0006281^biological_process^DNA repair`GO:0006265^biological_process^DNA topological change`GO:0007126^biological_process^meiotic nuclear division`GO:0007067^biological_process^mitotic nuclear division`GO:0000712^biological_process^resolution of meiotic recombination intermediates","GO:0003677^molecular_function^DNA binding`GO:0003916^molecular_function^DNA topoisomerase activity`GO:0006265^biological_process^DNA topological change`GO:0005694^cellular_component^chromosome`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN47374_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.54566477485991,"0.0076382552534516","0.0105025530306435","TRINITY_DN47374_c4_g1_i1","MAVI_CUCPE^MAVI_CUCPE^Q:235-600,H:2-104^31.15%ID^E:8e-07^RecName: Full=Mavicyanin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita",".","TRINITY_DN47374_c4_g1_i1.p1","154-804[+]","LAML_ARATH^LAML_ARATH^Q:12-166,H:11-136^29.49%ID^E:3e-07^RecName: Full=Lamin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02298.14^Cu_bind_like^Plastocyanin-like domain^46-140^E:3.7e-17","sigP:1^23^0.871^YES",".","ENOG410ZMPK^Plastocyanin-like domain","KEGG:ath:AT5G15350","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0009055^molecular_function^electron carrier activity","GO:0009055^molecular_function^electron carrier activity",".","."]
["TRINITY_DN47751_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",-1.54877991412411,"0.0112407156055365","0.0152032260904083","TRINITY_DN47751_c1_g5_i1","RGA4_SOLBU^RGA4_SOLBU^Q:760-8,H:393-641^37.31%ID^E:1e-29^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47751_c1_g5_i1.p1","2-766[-]","RGA4_SOLBU^RGA4_SOLBU^Q:3-253,H:393-641^37.31%ID^E:1e-29^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^2-48^E:6.3e-08",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN43804_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.55016181990699,"0.000801371554078484","0.0012014869286756","TRINITY_DN43804_c0_g3_i2","Y3471_ARATH^Y3471_ARATH^Q:10-399,H:12-146^40.44%ID^E:2e-23^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43804_c0_g3_i2.p1","1-408[+]","Y3471_ARATH^Y3471_ARATH^Q:4-133,H:12-146^40.44%ID^E:2e-23^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^26-62^E:5.4e-07`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^90-106^E:5400`PF13516.3^LRR_6^Leucine Rich repeat^90-105^E:0.13`PF00560.30^LRR_1^Leucine Rich Repeat^93-110^E:0.26`PF13516.3^LRR_6^Leucine Rich repeat^116-128^E:0.55","sigP:1^17^0.717^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47110","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN73215_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.55019733968707,"0.0131584125627286","0.0176643205807039","TRINITY_DN73215_c0_g1_i1","Y5986_ARATH^Y5986_ARATH^Q:286-867,H:141-383^36.07%ID^E:2e-34^RecName: Full=Uncharacterized protein At5g39865;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN73215_c0_g1_i1.p1","139-888[+]","Y5986_ARATH^Y5986_ARATH^Q:41-248,H:132-388^35.66%ID^E:7e-38^RecName: Full=Uncharacterized protein At5g39865;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00462.21^Glutaredoxin^Glutaredoxin^96-163^E:2.2e-11",".",".","ENOG4111HAI^Glutaredoxin","KEGG:ath:AT5G39865","GO:0005886^cellular_component^plasma membrane`GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN47258_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.55625442134667,"0.00640163610179928","0.00887170410322231","TRINITY_DN47258_c2_g2_i2","GRF5_ARATH^GRF5_ARATH^Q:670-846,H:66-124^76.27%ID^E:2e-43^RecName: Full=Growth-regulating factor 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GRF5_ARATH^GRF5_ARATH^Q:384-566,H:1-65^64.62%ID^E:2e-43^RecName: Full=Growth-regulating factor 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47258_c2_g2_i2.p1","649-1395[+]","GRF4_ORYSJ^GRF4_ORYSJ^Q:8-236,H:113-377^37.13%ID^E:6e-30^RecName: Full=Growth-regulating factor 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08879.7^WRC^WRC^24-66^E:1.9e-21",".",".",".","KEGG:osa:4330436","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0032502^biological_process^developmental process`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN42002_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.56502843994798,"0.00608143127992709","0.00844590113801509","TRINITY_DN42002_c0_g1_i1","APC4_ARATH^APC4_ARATH^Q:1878-238,H:4-549^64.17%ID^E:0^RecName: Full=Anaphase-promoting complex subunit 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42002_c0_g1_i1.p1","205-1878[-]","APC4_ARATH^APC4_ARATH^Q:1-549,H:4-551^63.93%ID^E:0^RecName: Full=Anaphase-promoting complex subunit 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12894.4^ANAPC4_WD40^Anaphase-promoting complex subunit 4 WD40 domain^28-113^E:2.5e-27`PF12896.4^ANAPC4^Anaphase-promoting complex, cyclosome, subunit 4^266-468^E:1.2e-57",".",".","ENOG410XPXK^anaphase promoting complex subunit 4","KEGG:ath:AT4G21530`KO:K03351","GO:0005680^cellular_component^anaphase-promoting complex`GO:0005634^cellular_component^nucleus`GO:0031145^biological_process^anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process`GO:0051301^biological_process^cell division`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0007067^biological_process^mitotic nuclear division`GO:0048481^biological_process^plant ovule development`GO:0016567^biological_process^protein ubiquitination`GO:0030071^biological_process^regulation of mitotic metaphase/anaphase transition",".",".","."]
["TRINITY_DN21248_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.56667466436981,"0.0211855962578985","0.027766485537263","TRINITY_DN21248_c0_g1_i2","LEA34_GOSHI^LEA34_GOSHI^Q:965-258,H:1-245^61.22%ID^E:6e-65^RecName: Full=Late embryogenesis abundant protein D-34;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium",".","TRINITY_DN21248_c0_g1_i2.p1","180-1031[-]","LEA34_GOSHI^LEA34_GOSHI^Q:23-273,H:1-260^61.54%ID^E:8e-94^RecName: Full=Late embryogenesis abundant protein D-34;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium","PF04927.9^SMP^Seed maturation protein^38-93^E:8.3e-17`PF04927.9^SMP^Seed maturation protein^151-207^E:8.2e-19`PF04927.9^SMP^Seed maturation protein^216-274^E:1.8e-16",".",".",".",".",".",".",".","."]
["TRINITY_DN46659_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.57796502902103,"0.000130200891474711","0.000206803422926451","TRINITY_DN46659_c1_g1_i1","PMGI_MESCR^PMGI_MESCR^Q:2026-350,H:1-559^85.69%ID^E:0^RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum",".","TRINITY_DN46659_c1_g1_i1.p1","347-2026[-]","PMGI_MESCR^PMGI_MESCR^Q:1-559,H:1-559^85.69%ID^E:0^RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum","PF01676.15^Metalloenzyme^Metalloenzyme superfamily^20-545^E:1.3e-100`PF06415.10^iPGM_N^BPG-independent PGAM N-terminus (iPGM_N)^102-322^E:4.3e-59",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0030145^molecular_function^manganese ion binding`GO:0004619^molecular_function^phosphoglycerate mutase activity`GO:0006007^biological_process^glucose catabolic process`GO:0006096^biological_process^glycolytic process","GO:0003824^molecular_function^catalytic activity`GO:0046872^molecular_function^metal ion binding`GO:0004619^molecular_function^phosphoglycerate mutase activity`GO:0030145^molecular_function^manganese ion binding`GO:0006007^biological_process^glucose catabolic process`GO:0005737^cellular_component^cytoplasm",".","."]
["TRINITY_DN43901_c6_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.57805144279471,"0.00516985664558993","0.00723125016734889","TRINITY_DN43901_c6_g3_i1","SCGT_TOBAC^SCGT_TOBAC^Q:1666-257,H:3-474^46.86%ID^E:2e-159^RecName: Full=Scopoletin glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43901_c6_g3_i1.p1","254-1639[-]","SCGT_TOBAC^SCGT_TOBAC^Q:1-461,H:12-474^46.91%ID^E:3e-159^RecName: Full=Scopoletin glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^246-375^E:2.7e-19",".",".",".",".","GO:0042802^molecular_function^identical protein binding`GO:0050275^molecular_function^scopoletin glucosyltransferase activity","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45361_c1_g7","leaves S. abrotanoides","roots S. abrotanoides",-1.58141988237926,"0.000192930870599162","0.000302908435847534","TRINITY_DN45361_c1_g7_i1","PER4_VITVI^PER4_VITVI^Q:1163-216,H:8-321^65.51%ID^E:1e-137^RecName: Full=Peroxidase 4 {ECO:0000250|UniProtKB:Q42578};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN45361_c1_g7_i1.p1","213-1223[-]","PER4_VITVI^PER4_VITVI^Q:12-336,H:2-321^68%ID^E:3e-159^RecName: Full=Peroxidase 4 {ECO:0000250|UniProtKB:Q42578};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF00141.20^peroxidase^Peroxidase^56-300^E:2.8e-82",".",".","ENOG410YETZ^peroxidase","KEGG:vvi:100257005`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47572_c2_g7","leaves S. abrotanoides","roots S. abrotanoides",-1.58203442787405,"0.000399653022368001","0.000611858364726768","TRINITY_DN47572_c2_g7_i3","VTI13_ARATH^VTI13_ARATH^Q:983-642,H:1-114^70.18%ID^E:6e-47^RecName: Full=Vesicle transport v-SNARE 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47572_c2_g7_i3.p1","588-983[-]","VTI13_ARATH^VTI13_ARATH^Q:1-114,H:1-114^70.18%ID^E:1e-50^RecName: Full=Vesicle transport v-SNARE 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05008.12^V-SNARE^Vesicle transport v-SNARE protein N-terminus^12-90^E:8.9e-26",".",".","ENOG4111J90^vesicle transport through interaction with t-SNAREs","KEGG:ath:AT3G29100`KO:K08493","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0006886^biological_process^intracellular protein transport`GO:0061025^biological_process^membrane fusion`GO:0016192^biological_process^vesicle-mediated transport","GO:0006886^biological_process^intracellular protein transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN38371_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.59333671902414,"0.00575420013574687","0.00801338871571767","TRINITY_DN38371_c0_g1_i2","E138_ARATH^E138_ARATH^Q:367-1650,H:28-452^59.11%ID^E:1e-174^RecName: Full=Glucan endo-1,3-beta-glucosidase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38371_c0_g1_i2.p1","256-1752[+]","E138_ARATH^E138_ARATH^Q:11-465,H:3-452^58.46%ID^E:0^RecName: Full=Glucan endo-1,3-beta-glucosidase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^35-355^E:1.2e-73`PF07983.10^X8^X8 domain^378-447^E:1.3e-17","sigP:1^30^0.491^YES",".","ENOG410YARB^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT1G64760","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN36690_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.59939475793637,"0.000316920237993618","0.000489327706624147","TRINITY_DN36690_c0_g1_i2","LAT52_SOLLC^LAT52_SOLLC^Q:98-568,H:1-161^52.8%ID^E:2e-50^RecName: Full=Anther-specific protein LAT52;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN36690_c0_g1_i2.p1","98-574[+]","LAT52_SOLLC^LAT52_SOLLC^Q:1-157,H:1-161^52.8%ID^E:2e-52^RecName: Full=Anther-specific protein LAT52;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF01190.14^Pollen_Ole_e_I^Pollen proteins Ole e I like^25-106^E:6.3e-17","sigP:1^19^0.898^YES",".","ENOG410ZND9^pollen Ole e 1 allergen and extensin family protein","KEGG:sly:101261755","GO:0005615^cellular_component^extracellular space",".",".","."]
["TRINITY_DN45487_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.60091183882385,"0.000128928922930421","0.000204878174129742","TRINITY_DN45487_c1_g3_i2","MYO11_ARATH^MYO11_ARATH^Q:5103-547,H:6-1526^78.13%ID^E:0^RecName: Full=Myosin-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45487_c1_g3_i2.p1","535-5109[-]","MYO11_ARATH^MYO11_ARATH^Q:3-1521,H:6-1526^78.19%ID^E:0^RecName: Full=Myosin-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02736.16^Myosin_N^Myosin N-terminal SH3-like domain^10-45^E:4.3e-06`PF00063.18^Myosin_head^Myosin head (motor domain)^64-724^E:1.5e-256`PF00612.24^IQ^IQ calmodulin-binding motif^741-759^E:0.03`PF00612.24^IQ^IQ calmodulin-binding motif^763-782^E:0.17`PF00612.24^IQ^IQ calmodulin-binding motif^789-807^E:0.0066`PF00612.24^IQ^IQ calmodulin-binding motif^836-856^E:0.0024`PF01843.16^DIL^DIL domain^1342-1446^E:8.3e-25",".",".","COG5022^myosin heavy chain","KEGG:ath:AT1G54560","GO:0005737^cellular_component^cytoplasm`GO:0016459^cellular_component^myosin complex`GO:0005524^molecular_function^ATP binding`GO:0003774^molecular_function^motor activity`GO:0030048^biological_process^actin filament-based movement","GO:0003774^molecular_function^motor activity`GO:0005524^molecular_function^ATP binding`GO:0016459^cellular_component^myosin complex`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44679_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.60289406266656,"0.000367598064134431","0.000564835743796259","TRINITY_DN44679_c4_g2_i1","NUDT1_ARATH^NUDT1_ARATH^Q:554-147,H:6-141^66.91%ID^E:5e-63^RecName: Full=Nudix hydrolase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44679_c4_g2_i1.p1","132-686[-]","NUDT1_ARATH^NUDT1_ARATH^Q:45-180,H:6-141^66.91%ID^E:1e-63^RecName: Full=Nudix hydrolase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00293.25^NUDIX^NUDIX domain^48-162^E:2e-19",".",".","COG1051^NUDiX hydrolase","KEGG:ath:AT1G68760`KO:K03574","GO:0005829^cellular_component^cytosol`GO:0035539^molecular_function^8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity`GO:0008413^molecular_function^8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity`GO:0019177^molecular_function^dihydroneopterin triphosphate pyrophosphohydrolase activity`GO:0046872^molecular_function^metal ion binding`GO:0000210^molecular_function^NAD+ diphosphatase activity`GO:0006974^biological_process^cellular response to DNA damage stimulus`GO:0006203^biological_process^dGTP catabolic process","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN46093_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.606610088333,"0.00755472639646508","0.0103913538735384","TRINITY_DN46093_c3_g2_i2","R1A3_SOLDE^R1A3_SOLDE^Q:671-6,H:285-531^27.67%ID^E:3e-13^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46093_c3_g2_i2.p1","3-671[-]","R1A3_SOLDE^R1A3_SOLDE^Q:1-222,H:285-531^27.67%ID^E:5e-14^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN39501_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.61751441667352,"0.00012110691669004","0.000192896155172369","TRINITY_DN39501_c1_g1_i1","LBD4_ARATH^LBD4_ARATH^Q:680-306,H:1-125^83.2%ID^E:8e-63^RecName: Full=LOB domain-containing protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39501_c1_g1_i1.p1","228-680[-]","LBD4_ARATH^LBD4_ARATH^Q:1-125,H:1-125^83.2%ID^E:3e-64^RecName: Full=LOB domain-containing protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03195.11^DUF260^Protein of unknown function DUF260^13-110^E:1e-44",".",".","ENOG410YHFG^lob domain-containing protein","KEGG:ath:AT1G31320",".",".",".","."]
["TRINITY_DN44091_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.63136931651275,"0.00830665435528087","0.0113798837407773","TRINITY_DN44091_c3_g2_i1","GDL53_ARATH^GDL53_ARATH^Q:1409-267,H:1-380^60.99%ID^E:6e-175^RecName: Full=GDSL esterase/lipase At3g26430;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44091_c3_g2_i1.p1","258-1409[-]","GDL53_ARATH^GDL53_ARATH^Q:1-381,H:1-380^60.99%ID^E:8e-177^RecName: Full=GDSL esterase/lipase At3g26430;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^34-362^E:1.3e-21","sigP:1^25^0.801^YES",".","ENOG410Y9BR^GDSL esterase lipase","KEGG:ath:AT3G26430","GO:0005576^cellular_component^extracellular region`GO:0016298^molecular_function^lipase activity`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN44908_c3_g5","leaves S. abrotanoides","roots S. abrotanoides",-1.63212129180607,"0.00388419223781101","0.00549952616587274","TRINITY_DN44908_c3_g5_i1","R1B16_SOLDE^R1B16_SOLDE^Q:39-425,H:1133-1264^39.39%ID^E:4e-15^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44908_c3_g5_i1.p1","3-593[+]","R1B16_SOLDE^R1B16_SOLDE^Q:13-141,H:1133-1264^39.39%ID^E:3e-15^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^156-194^E:1.1e-05",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44266_c4_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.63823759403979,"0.00245435938183446","0.00353464410186036","TRINITY_DN44266_c4_g2_i1","BH025_ARATH^BH025_ARATH^Q:675-202,H:152-324^46.86%ID^E:2e-36^RecName: Full=Transcription factor bHLH25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44266_c4_g2_i1.p1","187-957[-]","BH025_ARATH^BH025_ARATH^Q:95-252,H:152-324^48%ID^E:2e-39^RecName: Full=Transcription factor bHLH25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^95-141^E:6.2e-12",".",".","ENOG410YG6S^Transcription factor","KEGG:ath:AT4G37850","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN46691_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.64323884684031,"0.000636790933702522","0.000961842690582831","TRINITY_DN46691_c3_g1_i1","SCP40_ARATH^SCP40_ARATH^Q:375-1,H:49-179^68.7%ID^E:1e-56^RecName: Full=Serine carboxypeptidase-like 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46691_c3_g1_i1.p1","1-465[-]","SCP40_ARATH^SCP40_ARATH^Q:31-155,H:49-179^68.7%ID^E:7e-57^RecName: Full=Serine carboxypeptidase-like 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^62-155^E:5.5e-38","sigP:1^16^0.785^YES",".","COG2939^carboxy-peptidase","KEGG:ath:AT3G63470`KO:K16297","GO:0005576^cellular_component^extracellular region`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN45097_c5_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.64355141728932,"0.000798314516822426","0.00119710018148779","TRINITY_DN45097_c5_g2_i1","CRR38_ARATH^CRR38_ARATH^Q:821-204,H:46-249^51.44%ID^E:2e-57^RecName: Full=Cysteine-rich repeat secretory protein 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45097_c5_g2_i1.p1","195-929[-]","CRR38_ARATH^CRR38_ARATH^Q:5-242,H:13-249^48.13%ID^E:1e-74^RecName: Full=Cysteine-rich repeat secretory protein 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01657.14^Stress-antifung^Salt stress response/antifungal^31-124^E:1.9e-20`PF01657.14^Stress-antifung^Salt stress response/antifungal^150-238^E:5.1e-15","sigP:1^23^0.895^YES",".","ENOG410YIB0^cysteine-rich repeat secretory protein","KEGG:ath:AT3G22060","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005773^cellular_component^vacuole`GO:0009737^biological_process^response to abscisic acid",".",".","."]
["TRINITY_DN47590_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.64538594756272,"0.00198225581271775","0.0028779020688007","TRINITY_DN47590_c0_g3_i1","Y4374_ARATH^Y4374_ARATH^Q:586-2343,H:29-634^62.42%ID^E:0^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47590_c0_g3_i1.p1","487-2355[+]","Y4374_ARATH^Y4374_ARATH^Q:34-619,H:29-634^63.3%ID^E:0^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^32-70^E:1.9e-07`PF00560.30^LRR_1^Leucine Rich Repeat^194-215^E:0.44`PF00069.22^Pkinase^Protein kinase domain^337-600^E:1.1e-33`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^338-602^E:1.8e-31","sigP:1^27^0.637^YES",".","ENOG410YDXU^Leucine rich repeat N-terminal domain","KEGG:ath:AT4G23740","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44009_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.64651383538809,"0.00256922079591775","0.00369442698391092","TRINITY_DN44009_c0_g1_i1","NACK2_TOBAC^NACK2_TOBAC^Q:258-3095,H:1-955^68.01%ID^E:0^RecName: Full=Kinesin-like protein NACK2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44009_c0_g1_i1.p1","258-3098[+]","NACK2_TOBAC^NACK2_TOBAC^Q:1-946,H:1-955^69.15%ID^E:0^RecName: Full=Kinesin-like protein NACK2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF16796.2^Microtub_bd^Microtubule binding^31-165^E:2.2e-20`PF00225.20^Kinesin^Kinesin motor domain^36-349^E:1.1e-96`PF11995.5^DUF3490^Domain of unknown function (DUF3490)^763-927^E:4.5e-64",".",".",".",".","GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0005634^cellular_component^nucleus`GO:0009524^cellular_component^phragmoplast`GO:0005524^molecular_function^ATP binding`GO:0003777^molecular_function^microtubule motor activity`GO:0000919^biological_process^cell plate assembly`GO:0007018^biological_process^microtubule-based movement","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN47723_c1_g7","leaves S. abrotanoides","roots S. abrotanoides",-1.64797845855299,{"v":6333167510.71129,"d":"6.33E+09"},"0.000102822913521764","TRINITY_DN47723_c1_g7_i2","R1B16_SOLDE^R1B16_SOLDE^Q:360-106,H:941-1020^33.72%ID^E:4e-06^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47723_c1_g7_i2.p1","73-393[-]","R1B16_SOLDE^R1B16_SOLDE^Q:12-96,H:941-1020^33.72%ID^E:3e-06^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46425_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.65076767254543,"0.000231166405501314","0.000360911664396058","TRINITY_DN46425_c3_g1_i5","DCYD1_ORYSJ^DCYD1_ORYSJ^Q:65-1198,H:57-413^66.14%ID^E:5e-163^RecName: Full=Putative D-cysteine desulfhydrase 1, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46425_c3_g1_i5.p1","26-1003[+]","DCYD1_ORYSJ^DCYD1_ORYSJ^Q:14-316,H:57-358^70.63%ID^E:3e-151^RecName: Full=Putative D-cysteine desulfhydrase 1, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00291.22^PALP^Pyridoxal-phosphate dependent enzyme^39-314^E:1.6e-29",".",".","COG2515^1-aminocyclopropane-1-carboxylate deaminase","KEGG:osa:4330881","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0005739^cellular_component^mitochondrion`GO:0008660^molecular_function^1-aminocyclopropane-1-carboxylate deaminase activity`GO:0050897^molecular_function^cobalt ion binding`GO:0019148^molecular_function^D-cysteine desulfhydrase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0019447^biological_process^D-cysteine catabolic process`GO:0009693^biological_process^ethylene biosynthetic process`GO:0006094^biological_process^gluconeogenesis`GO:0019761^biological_process^glucosinolate biosynthetic process`GO:0006096^biological_process^glycolytic process`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway`GO:0032880^biological_process^regulation of protein localization`GO:0009651^biological_process^response to salt stress",".",".","."]
["TRINITY_DN57259_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.66287947567541,"0.00102857911112205","0.00152832936132481","TRINITY_DN57259_c0_g1_i1","BARD1_ARATH^BARD1_ARATH^Q:2127-223,H:9-711^38.21%ID^E:3e-140^RecName: Full=BRCA1-associated RING domain protein 1 {ECO:0000303|PubMed:18591352};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN57259_c0_g1_i1.p1","211-2157[-]","BARD1_ARATH^BARD1_ARATH^Q:11-645,H:9-711^38.21%ID^E:9e-145^RecName: Full=BRCA1-associated RING domain protein 1 {ECO:0000303|PubMed:18591352};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^26-60^E:1.5e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^27-57^E:5.8e-06`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^27-60^E:0.00011`PF13832.3^zf-HC5HC2H_2^PHD-zinc-finger like domain^314-375^E:1.7e-07`PF13771.3^zf-HC5HC2H^PHD-like zinc-binding domain^315-393^E:1.4e-09`PF00533.23^BRCT^BRCA1 C Terminus (BRCT) domain^445-510^E:1.4e-09`PF16589.2^BRCT_2^BRCT domain, a BRCA1 C-terminus domain^547-647^E:7.7e-08",".",".","ENOG4111WR7^E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability. Regulates centrosomal microtubule nucleation. Required for normal cell cycle progression from G2 to mitosis. Required for appropriate cell cycle arrests after ionizing irradiation in both the S-phase and the G2 phase of the cell cycle. Involved in transcriptional regulation of P21 in response to DNA damage. Required for FANCD2 targeting to sites of DNA damage. May function as a transcriptional regulator. Inhibits lipid synthesis by binding to inactive phosphorylated ACACA and preventing its dephosphorylation. Contributes to homologous recombination repair (HRR) via its direct interaction with PALB2, fine-tunes recombinational repair partly through its modulatory role in the PALB2-dependent loading of BRCA2-RAD51 repair machinery at DNA breaks. Component of the BRCA1-RBBP8 complex which regulates CHEK1 activation and controls cell cycle G2 M checkpoints on DNA damage via BRCA1-mediated ubiquitination of RBBP8 (By similarity)","KEGG:ath:AT1G04020`KO:K10683","GO:0070531^cellular_component^BRCA1-A complex`GO:0031436^cellular_component^BRCA1-BARD1 complex`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0003677^molecular_function^DNA binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0006281^biological_process^DNA repair`GO:0000724^biological_process^double-strand break repair via homologous recombination`GO:0080182^biological_process^histone H3-K4 trimethylation`GO:0048366^biological_process^leaf development`GO:0010078^biological_process^maintenance of root meristem identity`GO:0010492^biological_process^maintenance of shoot apical meristem identity`GO:0045717^biological_process^negative regulation of fatty acid biosynthetic process`GO:0035067^biological_process^negative regulation of histone acetylation`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0071158^biological_process^positive regulation of cell cycle arrest`GO:0035066^biological_process^positive regulation of histone acetylation`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0016567^biological_process^protein ubiquitination`GO:0065004^biological_process^protein-DNA complex assembly`GO:0042127^biological_process^regulation of cell proliferation`GO:0009934^biological_process^regulation of meristem structural organization`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN46291_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.6674050879978,"0.00878087279784557","0.012006723250944","TRINITY_DN46291_c3_g1_i3","R1A6_SOLDE^R1A6_SOLDE^Q:500-3,H:629-792^42.26%ID^E:4e-42^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:960-496,H:453-620^30.77%ID^E:4e-42^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46291_c3_g1_i3.p1","478-1254[-]","RPM1_ARATH^RPM1_ARATH^Q:162-255,H:170-265^32.29%ID^E:7e-11^RecName: Full=Disease resistance protein RPM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^176-237^E:1.3e-12",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G07040`KO:K13457","GO:0012505^cellular_component^endomembrane system`GO:0019897^cellular_component^extrinsic component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0000166^molecular_function^nucleotide binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN41829_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.68360805494721,"0.00418302799505944","0.00590523563379454","TRINITY_DN41829_c0_g2_i1","AKT1_ARATH^AKT1_ARATH^Q:2-217,H:484-555^77.78%ID^E:5e-20^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41829_c0_g2_i1.p1","50-325[+]","AKT1_ARATH^AKT1_ARATH^Q:1-56,H:500-555^76.79%ID^E:2e-22^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XPSE^Potassium voltage-gated channel, subfamily H (Eag-related), member","KEGG:ath:AT2G26650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0042802^molecular_function^identical protein binding`GO:0005242^molecular_function^inward rectifier potassium channel activity`GO:0010107^biological_process^potassium ion import`GO:0006813^biological_process^potassium ion transport`GO:0042391^biological_process^regulation of membrane potential`GO:0090333^biological_process^regulation of stomatal closure`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0048767^biological_process^root hair elongation",".",".","."]
["TRINITY_DN73893_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.69798230861983,"0.0012209712478895","0.00180275292143634","TRINITY_DN73893_c0_g1_i1","LRK91_ARATH^LRK91_ARATH^Q:2083-344,H:30-620^55.63%ID^E:0^RecName: Full=L-type lectin-domain containing receptor kinase IX.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN73893_c0_g1_i1.p1","233-2200[-]","LRK91_ARATH^LRK91_ARATH^Q:13-625,H:4-626^53.98%ID^E:0^RecName: Full=L-type lectin-domain containing receptor kinase IX.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00139.16^Lectin_legB^Legume lectin domain^30-264^E:1.2e-64`PF00069.22^Pkinase^Protein kinase domain^341-539^E:5.2e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^343-544^E:3.1e-43","sigP:1^29^0.798^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G10530","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45498_c6_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.69804354550517,"0.00882093963897377","0.012058498833509","TRINITY_DN45498_c6_g3_i1","RPM1_ARATH^RPM1_ARATH^Q:121-432,H:169-279^34.23%ID^E:2e-13^RecName: Full=Disease resistance protein RPM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45498_c6_g3_i1.p1","1-432[+]","RPM1_ARATH^RPM1_ARATH^Q:41-144,H:169-279^34.23%ID^E:1e-13^RecName: Full=Disease resistance protein RPM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^53-141^E:4.3e-16",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G07040`KO:K13457","GO:0012505^cellular_component^endomembrane system`GO:0019897^cellular_component^extrinsic component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0000166^molecular_function^nucleotide binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45521_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.70331436689624,{"v":8985055723.59348,"d":"8.99E+09"},"0.000144405318041531","TRINITY_DN45521_c1_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:922-125,H:514-780^34.06%ID^E:1e-38^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:150-1,H:772-821^44%ID^E:1e-38^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45521_c1_g1_i1.p1","104-1093[-]","R1B17_SOLDE^R1B17_SOLDE^Q:62-323,H:532-795^35.16%ID^E:8e-35^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^76-325^E:9.3e-48",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44247_c0_g5","leaves S. abrotanoides","roots S. abrotanoides",-1.72270063365601,"0.000234012979118856","0.000365210156571962","TRINITY_DN44247_c0_g5_i1","ARFP_ARATH^ARFP_ARATH^Q:816-97,H:1-237^72.95%ID^E:8e-103^RecName: Full=Auxin response factor 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44247_c0_g5_i1.p1","1-816[-]","ARFP_ARATH^ARFP_ARATH^Q:1-240,H:1-237^74.29%ID^E:4e-115^RecName: Full=Auxin response factor 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02362.18^B3^B3 DNA binding domain^124-225^E:4.5e-23",".",".","ENOG410ZZ2C^auxin response factor","KEGG:ath:AT4G30080","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0035198^molecular_function^miRNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0051301^biological_process^cell division`GO:0007389^biological_process^pattern specification process`GO:0009733^biological_process^response to auxin`GO:0048829^biological_process^root cap development`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN43635_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.73671387219843,"0.00400272710553341","0.00566033238642953","TRINITY_DN43635_c0_g1_i4","RNHX1_ARATH^RNHX1_ARATH^Q:865-566,H:1-100^37%ID^E:5e-17^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RNHX1_ARATH^RNHX1_ARATH^Q:519-304,H:119-193^36%ID^E:5e-17^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43635_c0_g1_i4.p1","467-1285[-]","M1250_ARATH^M1250_ARATH^Q:7-73,H:14-80^44.78%ID^E:6e-15^RecName: Full=Uncharacterized mitochondrial protein AtMg01250;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00078.24^RVT_1^Reverse transcriptase (RNA-dependent DNA polymerase)^4-141^E:6e-11",".",".","ENOG410Y65V^Retrotransposon protein","KEGG:ath:ArthMp102","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN45335_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.73919451009857,"0.00317890444720676","0.00453634584803078","TRINITY_DN45335_c0_g3_i1","FIPS5_ARATH^FIPS5_ARATH^Q:2917-2462,H:328-485^56.96%ID^E:5e-49^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FIPS5_ARATH^FIPS5_ARATH^Q:1729-533,H:780-1178^34.43%ID^E:4e-35^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45335_c0_g3_i1.p1","485-2755[-]","FIPS5_ARATH^FIPS5_ARATH^Q:343-741,H:780-1178^34.43%ID^E:2e-35^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FIPS5_ARATH^FIPS5_ARATH^Q:2-98,H:383-485^53.4%ID^E:3e-22^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5213^mRNA processing","KEGG:ath:AT5G58040","GO:0005634^cellular_component^nucleus`GO:0042802^molecular_function^identical protein binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing",".",".","."]
["TRINITY_DN44555_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.74898647239657,"0.00799601588948085","0.0109746330059473","TRINITY_DN44555_c4_g3_i1","PDCB5_ARATH^PDCB5_ARATH^Q:133-372,H:39-118^65%ID^E:3e-33^RecName: Full=PLASMODESMATA CALLOSE-BINDING PROTEIN 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44555_c4_g3_i1.p1","31-543[+]","PDCB5_ARATH^PDCB5_ARATH^Q:8-168,H:12-180^46.15%ID^E:5e-47^RecName: Full=PLASMODESMATA CALLOSE-BINDING PROTEIN 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07983.10^X8^X8 domain^36-107^E:1e-19","sigP:1^24^0.826^YES",".","ENOG410YRJI^glucan endo-1,3-beta-glucosidase-like protein","KEGG:ath:AT3G58100","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0001872^molecular_function^(1->3)-beta-D-glucan binding`GO:0030247^molecular_function^polysaccharide binding",".",".","."]
["TRINITY_DN47486_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.77114554131792,"0.00570370072764277","0.00794629544772537","TRINITY_DN47486_c5_g1_i1","PTR53_ARATH^PTR53_ARATH^Q:1076-204,H:314-613^57%ID^E:2e-108^RecName: Full=Protein NRT1/ PTR FAMILY 2.11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47486_c5_g1_i1.p1","171-1094[-]","PTR53_ARATH^PTR53_ARATH^Q:7-297,H:314-613^57%ID^E:3e-120^RecName: Full=Protein NRT1/ PTR FAMILY 2.11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^6-237^E:1.1e-39",".",".","COG3104^transporter","KEGG:ath:AT5G62680","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0090448^molecular_function^glucosinolate:proton symporter activity`GO:1901349^biological_process^glucosinolate transport`GO:0090449^biological_process^phloem glucosinolate loading`GO:0080167^biological_process^response to karrikin","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46154_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.77370640211369,"0.000111523691826471","0.000178077628624658","TRINITY_DN46154_c2_g1_i1","HSP72_SOLLC^HSP72_SOLLC^Q:1-282,H:525-618^65.96%ID^E:9e-34^RecName: Full=Heat shock cognate 70 kDa protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN46154_c2_g1_i1.p1","1-399[+]","MD37C_ARATH^MD37C_ARATH^Q:1-94,H:525-618^65.96%ID^E:2e-34^RecName: Full=Probable mediator of RNA polymerase II transcription subunit 37c;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00012.17^HSP70^Hsp70 protein^1-94^E:9e-07",".",".","COG0443^Heat shock protein","KEGG:ath:AT3G12580`KO:K03283","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005829^cellular_component^cytosol`GO:0005794^cellular_component^Golgi apparatus`GO:0005739^cellular_component^mitochondrion`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0005524^molecular_function^ATP binding`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0016567^biological_process^protein ubiquitination`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009617^biological_process^response to bacterium`GO:0046686^biological_process^response to cadmium ion`GO:0009408^biological_process^response to heat`GO:0009644^biological_process^response to high light intensity`GO:0042542^biological_process^response to hydrogen peroxide`GO:0009266^biological_process^response to temperature stimulus`GO:0009615^biological_process^response to virus`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46189_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.77575755452569,"0.00449700406164866","0.00632695176592124","TRINITY_DN46189_c5_g1_i4","Y5262_ARATH^Y5262_ARATH^Q:1792-458,H:17-411^23.55%ID^E:2e-13^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46189_c5_g1_i4.p1","116-2023[-]","Y5262_ARATH^Y5262_ARATH^Q:78-522,H:17-411^23.55%ID^E:2e-13^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^127-202^E:1.2e-06`PF13962.3^PGG^Domain of unknown function^464-575^E:1.9e-20",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT5G02620","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN46502_c9_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.78516061124288,"0.000376067105901997","0.000577362949142991","TRINITY_DN46502_c9_g1_i1","PKS4_ARATH^PKS4_ARATH^Q:1176-493,H:33-291^31.02%ID^E:8e-14^RecName: Full=Protein PHYTOCHROME KINASE SUBSTRATE 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46502_c9_g1_i1.p1","136-1182[-]","PKS4_ARATH^PKS4_ARATH^Q:3-230,H:33-291^31.02%ID^E:8e-14^RecName: Full=Protein PHYTOCHROME KINASE SUBSTRATE 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YSDM^phytochrome kinase substrate","KEGG:ath:AT5G04190","GO:0009638^biological_process^phototropism`GO:0010017^biological_process^red or far-red light signaling pathway`GO:0009585^biological_process^red, far-red light phototransduction",".",".","."]
["TRINITY_DN116851_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.79384269872765,"0.00566467424745033","0.00789473610127913","TRINITY_DN116851_c0_g1_i1","TRN1_DATST^TRN1_DATST^Q:124-894,H:16-273^58.27%ID^E:2e-100^RecName: Full=Tropinone reductase 1 {ECO:0000303|PubMed:8415746};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Datureae; Datura",".","TRINITY_DN116851_c0_g1_i1.p1","91-891[+]","TRN1_DATST^TRN1_DATST^Q:12-266,H:16-271^58.33%ID^E:8e-109^RecName: Full=Tropinone reductase 1 {ECO:0000303|PubMed:8415746};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Datureae; Datura","PF00106.22^adh_short^short chain dehydrogenase^20-208^E:5.6e-53`PF08659.7^KR^KR domain^21-179^E:6e-13`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^21-181^E:0.00011`PF13561.3^adh_short_C2^Enoyl-(Acyl carrier protein) reductase^26-263^E:4.5e-56",".",".",".","KEGG:ag:AAA33281`KO:K08081","GO:0050356^molecular_function^tropine dehydrogenase activity`GO:0009710^biological_process^tropane alkaloid biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding",".","."]
["TRINITY_DN45607_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.80444064411803,"0.00881743521251709","0.0120543099562833","TRINITY_DN45607_c0_g3_i1","CAP10_ARATH^CAP10_ARATH^Q:254-1720,H:18-494^46.09%ID^E:8e-110^RecName: Full=Putative clathrin assembly protein At5g35200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45607_c0_g3_i1.p1","200-1363[+]","CAP10_ARATH^CAP10_ARATH^Q:19-371,H:18-372^53.99%ID^E:5e-125^RecName: Full=Putative clathrin assembly protein At5g35200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07651.13^ANTH^ANTH domain^32-298^E:1.8e-72",".",".","ENOG410XQ90^Clathrin assembly protein","KEGG:ath:AT5G35200","GO:0030136^cellular_component^clathrin-coated vesicle`GO:0005905^cellular_component^coated pit`GO:0005794^cellular_component^Golgi apparatus`GO:0005886^cellular_component^plasma membrane`GO:0005545^molecular_function^1-phosphatidylinositol binding`GO:0048268^biological_process^clathrin coat assembly`GO:0006897^biological_process^endocytosis","GO:0005543^molecular_function^phospholipid binding",".","."]
["TRINITY_DN28061_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.81668083138146,"0.01080936200087","0.0146473060010799","TRINITY_DN28061_c0_g1_i1","SEOC_ARATH^SEOC_ARATH^Q:49-2010,H:12-664^30.92%ID^E:5e-96^RecName: Full=Protein SIEVE ELEMENT OCCLUSION C {ECO:0000303|PubMed:20932300};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28061_c0_g1_i1.p1","1-2022[+]","SEOC_ARATH^SEOC_ARATH^Q:17-670,H:12-664^32.6%ID^E:5e-119^RecName: Full=Protein SIEVE ELEMENT OCCLUSION C {ECO:0000303|PubMed:20932300};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14576.3^SEO_N^Sieve element occlusion N-terminus^17-286^E:2.9e-65`PF14577.3^SEO_C^Sieve element occlusion C-terminus^443-672^E:2.8e-67",".",".","ENOG411157J^NA","KEGG:ath:AT1G67790",".",".",".","."]
["TRINITY_DN39006_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.81841340676612,{"v":7769102296.26522,"d":"7.77E+09"},"0.000125377963330169","TRINITY_DN39006_c0_g1_i1","C94B3_ARATH^C94B3_ARATH^Q:243-1574,H:34-489^64.91%ID^E:0^RecName: Full=Cytochrome P450 94B3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39006_c0_g1_i1.p1","132-1619[+]","C94B3_ARATH^C94B3_ARATH^Q:2-495,H:4-503^62.03%ID^E:0^RecName: Full=Cytochrome P450 94B3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^70-468^E:2.2e-63","sigP:1^21^0.763^YES",".","COG2124^Cytochrome p450","KEGG:ath:AT3G48520","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0052694^molecular_function^jasmonoyl-isoleucine-12-hydroxylase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0048653^biological_process^anther development`GO:0002213^biological_process^defense response to insect`GO:0010154^biological_process^fruit development`GO:0009694^biological_process^jasmonic acid metabolic process`GO:0009555^biological_process^pollen development`GO:0009611^biological_process^response to wounding`GO:0048480^biological_process^stigma development","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46066_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.82957862679566,"0.00281634630457517","0.00403621766149484","TRINITY_DN46066_c0_g1_i3","R1A6_SOLDE^R1A6_SOLDE^Q:1248-151,H:520-863^33.06%ID^E:7e-42^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46066_c0_g1_i3.p1","1-1617[-]","R1A6_SOLDE^R1A6_SOLDE^Q:123-489,H:519-863^32.98%ID^E:5e-42^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^153-425^E:4.2e-56",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46671_c4_g6","leaves S. abrotanoides","roots S. abrotanoides",-1.8296792148341,"0.0196721386787804","0.0258720605850364","TRINITY_DN46671_c4_g6_i2","Y3475_ARATH^Y3475_ARATH^Q:311-1147,H:22-297^36.79%ID^E:2e-45^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:449-1147,H:362-590^33.05%ID^E:6e-23^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:452-1147,H:188-423^34.45%ID^E:2e-22^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:482-1012,H:421-593^32.77%ID^E:1e-17^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46671_c4_g6_i2.p1","107-1168[+]","Y3475_ARATH^Y3475_ARATH^Q:69-347,H:22-297^36.79%ID^E:6e-46^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:115-347,H:362-590^33.05%ID^E:5e-23^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:116-347,H:188-423^34.45%ID^E:2e-22^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:126-347,H:271-519^31.1%ID^E:7e-20^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:200-349,H:80-226^37.33%ID^E:2e-18^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:128-302,H:423-593^33.14%ID^E:6e-18^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^71-109^E:2.7e-09`PF00560.30^LRR_1^Leucine Rich Repeat^140-161^E:0.53",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN35559_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.83558372993612,"0.00828216752823776","0.0113491764712873","TRINITY_DN35559_c0_g1_i2","AT21A_ARATH^AT21A_ARATH^Q:2385-1879,H:30-201^34.29%ID^E:6e-21^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AT21A_ARATH^AT21A_ARATH^Q:639-463,H:305-364^41.67%ID^E:1e-07^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35559_c0_g1_i2.p1","454-2463[-]","AT21A_ARATH^AT21A_ARATH^Q:27-202,H:30-208^35.71%ID^E:7e-26^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AT21A_ARATH^AT21A_ARATH^Q:609-667,H:305-364^41.67%ID^E:4e-08^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^621-665^E:9.2e-14`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^623-664^E:6.3e-09`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^623-665^E:3.9e-08`PF17123.2^zf-RING_11^RING-like zinc finger^623-651^E:1.3e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^623-662^E:1.2e-06`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^623-664^E:2.9e-05","sigP:1^18^0.863^YES",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT2G46495","GO:0016021^cellular_component^integral component of membrane`GO:0030247^molecular_function^polysaccharide binding`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN28774_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.84152536507199,"0.00286520581334171","0.0041030190768087","TRINITY_DN28774_c0_g1_i3","PHYLO_ARATH^PHYLO_ARATH^Q:4912-23,H:64-1692^52.35%ID^E:0^RecName: Full=Protein PHYLLO, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28774_c0_g1_i3.p1","2-5095[-]","PHYLO_ARATH^PHYLO_ARATH^Q:62-1691,H:64-1692^52.47%ID^E:0^RecName: Full=Protein PHYLLO, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02776.15^TPP_enzyme_N^Thiamine pyrophosphate enzyme, N-terminal TPP binding domain^366-529^E:2.8e-27`PF16582.2^TPP_enzyme_M_2^Middle domain of thiamine pyrophosphate^546-775^E:6.1e-20`PF02775.18^TPP_enzyme_C^Thiamine pyrophosphate enzyme, C-terminal TPP binding domain^819-939^E:5.1e-08`PF13378.3^MR_MLE_C^Enolase C-terminal domain-like^1158-1337^E:1.5e-25`PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^1433-1557^E:8.6e-16`PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^1433-1640^E:7.3e-08`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^1434-1684^E:2e-19`PF03096.11^Ndr^Ndr family^1451-1692^E:2.9e-09",".",".","COG1165^Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) (By similarity)`COG1441^Converts SHCHC to OSB (By similarity)","KEGG:ath:AT1G68890`KO:K14759","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0070204^molecular_function^2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity`GO:0070205^molecular_function^2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity`GO:0046872^molecular_function^metal ion binding`GO:0030976^molecular_function^thiamine pyrophosphate binding`GO:0009063^biological_process^cellular amino acid catabolic process`GO:0009234^biological_process^menaquinone biosynthetic process`GO:0042550^biological_process^photosystem I stabilization`GO:0042372^biological_process^phylloquinone biosynthetic process","GO:0030976^molecular_function^thiamine pyrophosphate binding`GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN44730_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.86602474639151,"0.00344858392568112","0.00490839303690037","TRINITY_DN44730_c0_g2_i1","R13L1_ARATH^R13L1_ARATH^Q:2-466,H:671-823^36.59%ID^E:2e-23^RecName: Full=Putative disease resistance RPP13-like protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44730_c0_g2_i1.p1","2-466[+]","R13L1_ARATH^R13L1_ARATH^Q:1-155,H:671-823^36.59%ID^E:2e-23^RecName: Full=Putative disease resistance RPP13-like protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G14470","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN46414_c4_g5","leaves S. abrotanoides","roots S. abrotanoides",-1.87380882675901,"0.000297465790441214","0.00046027607728156","TRINITY_DN46414_c4_g5_i1","ATL43_ARATH^ATL43_ARATH^Q:1353-454,H:54-374^48.54%ID^E:7e-63^RecName: Full=RING-H2 finger protein ATL43;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46414_c4_g5_i1.p1","292-1494[-]","ATL43_ARATH^ATL43_ARATH^Q:45-375,H:51-397^48.53%ID^E:2e-84^RecName: Full=RING-H2 finger protein ATL43;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^121-164^E:1.9e-14`PF17123.2^zf-RING_11^RING-like zinc finger^121-150^E:8.3e-11`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^121-163^E:8.2e-09`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^122-163^E:1.4e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^122-161^E:0.00015`PF12861.4^zf-ANAPC11^Anaphase-promoting complex subunit 11 RING-H2 finger^124-166^E:1.9e-05`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^130-164^E:2e-08","sigP:1^21^0.74^YES",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT5G05810","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0005680^cellular_component^anaphase-promoting complex",".","."]
["TRINITY_DN47732_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.884132905539,"0.000304192578389999","0.000470445350392711","TRINITY_DN47732_c1_g3_i1","DRL28_ARATH^DRL28_ARATH^Q:350-3,H:467-582^36.21%ID^E:7e-15^RecName: Full=Probable disease resistance protein At4g27220;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47732_c1_g3_i1.p1","3-350[-]","DRL28_ARATH^DRL28_ARATH^Q:1-116,H:467-582^36.21%ID^E:3e-18^RecName: Full=Probable disease resistance protein At4g27220;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13306.3^LRR_5^Leucine rich repeats (6 copies)^6-90^E:0.0088`PF13855.3^LRR_8^Leucine rich repeat^29-86^E:2.9e-12",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G27220","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45143_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.88473957024887,"0.000120399777470166","0.000191825630212694","TRINITY_DN45143_c1_g1_i1","Y4276_ARATH^Y4276_ARATH^Q:571-131,H:84-254^38.15%ID^E:9e-29^RecName: Full=Uncharacterized protein At4g22758;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45143_c1_g1_i1.p1","125-790[-]","Y4276_ARATH^Y4276_ARATH^Q:73-220,H:83-254^38.64%ID^E:4e-30^RecName: Full=Uncharacterized protein At4g22758;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G22758",".",".",".","."]
["TRINITY_DN46093_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.88515071863078,"0.000103736255445796","0.000165962250693634","TRINITY_DN46093_c3_g1_i4","R1B19_SOLDE^R1B19_SOLDE^Q:458-216,H:819-900^39.02%ID^E:2e-10^RecName: Full=Putative late blight resistance protein homolog R1B-19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46093_c3_g1_i4.p1","3-458[-]","R1B14_SOLDE^R1B14_SOLDE^Q:1-116,H:818-951^33.09%ID^E:2e-11^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN47728_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.91032114667368,"0.000373578457881729","0.000573703040332869","TRINITY_DN47728_c3_g4_i2","ATB40_ARATH^ATB40_ARATH^Q:878-255,H:1-215^50.46%ID^E:2e-45^RecName: Full=Homeobox-leucine zipper protein ATHB-40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47728_c3_g4_i2.p1","246-878[-]","ATB40_ARATH^ATB40_ARATH^Q:1-208,H:1-215^51.14%ID^E:1e-63^RecName: Full=Homeobox-leucine zipper protein ATHB-40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00046.26^Homeobox^Homeobox domain^55-107^E:3.7e-18",".",".","ENOG410Z2UE^homeobox-leucine zipper protein","KEGG:ath:AT4G36740`KO:K09338","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009733^biological_process^response to auxin`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN46887_c3_g7","leaves S. abrotanoides","roots S. abrotanoides",-1.91069605075666,"0.000306459915633278","0.000473818071807693","TRINITY_DN46887_c3_g7_i1","CGT_FRAAN^CGT_FRAAN^Q:1308-1,H:7-449^60.71%ID^E:0^RecName: Full=Cinnamate beta-D-glucosyltransferase {ECO:0000303|PubMed:16443693, ECO:0000303|PubMed:17323078};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".","TRINITY_DN46887_c3_g7_i1.p1","1-1350[-]","CGT_FRAAN^CGT_FRAAN^Q:15-450,H:7-449^61.16%ID^E:0^RecName: Full=Cinnamate beta-D-glucosyltransferase {ECO:0000303|PubMed:16443693, ECO:0000303|PubMed:17323078};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^274-425^E:2.2e-26",".",".",".",".","GO:0050412^molecular_function^cinnamate beta-D-glucosyltransferase activity`GO:0009636^biological_process^response to toxic substance","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN39036_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.93719587106464,"0.000226538499132395","0.000353888055322173","TRINITY_DN39036_c0_g1_i1","ELCL_ARATH^ELCL_ARATH^Q:270-1202,H:13-350^29.79%ID^E:6e-30^RecName: Full=Protein ELC-like {ECO:0000303|PubMed:17090720};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39036_c0_g1_i1.p1","234-1229[+]","ELCL_ARATH^ELCL_ARATH^Q:13-323,H:13-350^28.91%ID^E:1e-40^RecName: Full=Protein ELC-like {ECO:0000303|PubMed:17090720};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05743.10^UEV^UEV domain^39-152^E:7.8e-18`PF09454.7^Vps23_core^Vps23 core domain^259-322^E:1.6e-17",".",".","ENOG410XT2Q^Tumor susceptibility gene 101","KEGG:ath:AT5G13860`KO:K12183","GO:0000813^cellular_component^ESCRT I complex`GO:0005770^cellular_component^late endosome`GO:0006464^biological_process^cellular protein modification process`GO:0015031^biological_process^protein transport","GO:0006464^biological_process^cellular protein modification process`GO:0015031^biological_process^protein transport",".","."]
["TRINITY_DN43016_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.94119837801226,{"v":9316861848.56515,"d":"9.32E+09"},"0.000149544916763927","TRINITY_DN43016_c0_g1_i4","5EAS_TOBAC^5EAS_TOBAC^Q:372-1,H:12-131^50.81%ID^E:1e-33^RecName: Full=5-epi-aristolochene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43016_c0_g1_i4.p1","1-393[-]","5EAS_TOBAC^5EAS_TOBAC^Q:8-131,H:12-131^50.81%ID^E:5e-34^RecName: Full=5-epi-aristolochene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^21-129^E:5e-29",".",".",".","KEGG:ag:AAA19216`KO:K15804","GO:0005737^cellular_component^cytoplasm`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN41829_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.94510490059623,"0.0055821289876492","0.00778643156582946","TRINITY_DN41829_c0_g1_i1","AKT1_ARATH^AKT1_ARATH^Q:2-610,H:658-855^47.83%ID^E:2e-37^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41829_c0_g1_i1.p1","83-619[+]","AKT1_ARATH^AKT1_ARATH^Q:2-176,H:686-855^47.78%ID^E:7e-37^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11834.5^KHA^KHA, dimerisation domain of potassium ion channel^112-172^E:6.5e-21",".",".","ENOG410XPSE^Potassium voltage-gated channel, subfamily H (Eag-related), member","KEGG:ath:AT2G26650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0042802^molecular_function^identical protein binding`GO:0005242^molecular_function^inward rectifier potassium channel activity`GO:0010107^biological_process^potassium ion import`GO:0006813^biological_process^potassium ion transport`GO:0042391^biological_process^regulation of membrane potential`GO:0090333^biological_process^regulation of stomatal closure`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0048767^biological_process^root hair elongation",".",".","."]
["TRINITY_DN44989_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",-1.95197874896515,{"v":9416942746.44609,"d":"9.42E+09"},"0.000151089320458155","TRINITY_DN44989_c4_g3_i1","RBOHD_SOLTU^RBOHD_SOLTU^Q:3-185,H:343-403^85.25%ID^E:1e-28^RecName: Full=Respiratory burst oxidase homolog protein D;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44989_c4_g3_i1.p1","3-323[+]","RBOHD_SOLTU^RBOHD_SOLTU^Q:1-61,H:343-403^85.25%ID^E:3e-31^RecName: Full=Respiratory burst oxidase homolog protein D;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005509^molecular_function^calcium ion binding`GO:0050664^molecular_function^oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor`GO:0004601^molecular_function^peroxidase activity",".",".","."]
["TRINITY_DN44704_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.95482774262854,"0.000434987833749694","0.000664283746113873","TRINITY_DN44704_c0_g4_i2","DCAM_MAIZE^DCAM_MAIZE^Q:453-1436,H:16-360^58.09%ID^E:6e-129^RecName: Full=S-adenosylmethionine decarboxylase proenzyme;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN44704_c0_g4_i2.p1","429-1505[+]","DCAM_MAIZE^DCAM_MAIZE^Q:6-336,H:13-360^59.03%ID^E:8e-137^RecName: Full=S-adenosylmethionine decarboxylase proenzyme;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF01536.13^SAM_decarbox^Adenosylmethionine decarboxylase^9-319^E:1.3e-101",".",".","ENOG410XRN0^S-adenosylmethionine decarboxylase proenzyme","KEGG:zma:542733`KO:K01611","GO:0004014^molecular_function^adenosylmethionine decarboxylase activity`GO:0006557^biological_process^S-adenosylmethioninamine biosynthetic process`GO:0008295^biological_process^spermidine biosynthetic process`GO:0006597^biological_process^spermine biosynthetic process","GO:0004014^molecular_function^adenosylmethionine decarboxylase activity`GO:0006597^biological_process^spermine biosynthetic process`GO:0008295^biological_process^spermidine biosynthetic process",".","."]
["TRINITY_DN46823_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-1.96992378197164,"0.00564217055932132","0.00786568455625932","TRINITY_DN46823_c2_g2_i4","ASPL2_ARATH^ASPL2_ARATH^Q:632-1378,H:73-321^46.46%ID^E:2e-79^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ASPL2_ARATH^ASPL2_ARATH^Q:1368-1580,H:342-412^43.66%ID^E:2e-79^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ASPL2_ARATH^ASPL2_ARATH^Q:1562-1732,H:400-455^54.39%ID^E:5e-11^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46823_c2_g2_i4.p1","986-1387[+]","ASPL2_ARATH^ASPL2_ARATH^Q:5-131,H:193-321^47.73%ID^E:3e-34^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^4-62^E:3.4e-12`PF14541.3^TAXi_C^Xylanase inhibitor C-terminal^81-131^E:2.7e-05",".",".","ENOG410XNV7^aspartic","KEGG:ath:AT1G65240","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0004190^molecular_function^aspartic-type endopeptidase activity",".",".","."]
["TRINITY_DN45875_c5_g4","leaves S. abrotanoides","roots S. abrotanoides",-1.98063771455794,"0.000873536926077083","0.00130603667195025","TRINITY_DN45875_c5_g4_i1","ECP40_DAUCA^ECP40_DAUCA^Q:727-626,H:1-34^79.41%ID^E:3e-09^RecName: Full=Embryogenic cell protein 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45875_c5_g4_i1.p1","281-727[-]","DHLE_RAPSA^DHLE_RAPSA^Q:1-148,H:1-183^49.46%ID^E:1e-27^RecName: Full=Late embryogenesis abundant protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus","PF00257.16^Dehydrin^Dehydrin^64-145^E:6.2e-31",".",".",".",".","GO:0006950^biological_process^response to stress`GO:0009415^biological_process^response to water","GO:0006950^biological_process^response to stress`GO:0009415^biological_process^response to water",".","."]
["TRINITY_DN46605_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.98331081988137,"0.000381780726798863","0.000585707974784765","TRINITY_DN46605_c0_g1_i1","SPL8_ARATH^SPL8_ARATH^Q:677-982,H:134-234^72.64%ID^E:3e-43^RecName: Full=Squamosa promoter-binding-like protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46605_c0_g1_i1.p1","347-1099[+]","SPL8_ARATH^SPL8_ARATH^Q:1-212,H:1-234^47.52%ID^E:9e-55^RecName: Full=Squamosa promoter-binding-like protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03110.11^SBP^SBP domain^166-226^E:1.6e-16",".",".","ENOG41120IC^Squamosa promoter-binding-like protein","KEGG:ath:AT1G02065","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0048653^biological_process^anther development`GO:0030154^biological_process^cell differentiation`GO:0009554^biological_process^megasporogenesis`GO:0009556^biological_process^microsporogenesis`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN40360_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.98596178556998,"0.024348576031836","0.0317101235365626","TRINITY_DN40360_c0_g1_i1","TPT_SPIOL^TPT_SPIOL^Q:1345-407,H:88-400^82.75%ID^E:3e-167^RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN40360_c0_g1_i1.p1","383-1600[-]","TPT_PEA^TPT_PEA^Q:39-399,H:58-399^76.45%ID^E:0^RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF03151.13^TPT^Triose-phosphate Transporter family^99-386^E:1.6e-108`PF00892.17^EamA^EamA-like transporter family^242-386^E:4e-06",".",".",".",".","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN31928_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-1.9867887899017,"0.00112587804893161","0.00166648208723753","TRINITY_DN31928_c0_g1_i2","2A5B_ARATH^2A5B_ARATH^Q:1714-458,H:67-485^71.12%ID^E:0^RecName: Full=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN31928_c0_g1_i2.p1","449-1879[-]","2A5B_ARATH^2A5B_ARATH^Q:1-474,H:1-485^66.46%ID^E:0^RecName: Full=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01603.17^B56^Protein phosphatase 2A regulatory B subunit (B56 family)^61-472^E:8.8e-174",".",".","ENOG410XQJW^Protein phosphatase 2, regulatory subunit B","KEGG:ath:AT3G09880`KO:K11584","GO:0000159^cellular_component^protein phosphatase type 2A complex`GO:0008601^molecular_function^protein phosphatase type 2A regulator activity`GO:0007165^biological_process^signal transduction","GO:0008601^molecular_function^protein phosphatase type 2A regulator activity`GO:0007165^biological_process^signal transduction`GO:0000159^cellular_component^protein phosphatase type 2A complex",".","."]
["TRINITY_DN43418_c1_g6","leaves S. abrotanoides","roots S. abrotanoides",-2.02205888311238,"0.0066590689769813","0.00921028820066062","TRINITY_DN43418_c1_g6_i1","Y4919_ARATH^Y4919_ARATH^Q:846-1136,H:166-293^45.31%ID^E:4e-19^RecName: Full=Uncharacterized zinc finger CCHC domain-containing protein At4g19190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43418_c1_g6_i1.p1","3-1508[+]","Y4919_ARATH^Y4919_ARATH^Q:234-378,H:113-293^41.94%ID^E:4e-24^RecName: Full=Uncharacterized zinc finger CCHC domain-containing protein At4g19190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZVMR^corepressor interacting with RBPJ, 1","KEGG:ath:AT4G19190","GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding",".",".","."]
["TRINITY_DN46031_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-2.02976543791486,"0.018222162204055","0.0240610216816297","TRINITY_DN46031_c2_g2_i1","RGA4_SOLBU^RGA4_SOLBU^Q:886-2,H:2-273^32.54%ID^E:8e-37^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46031_c2_g2_i1.p1","2-901[-]","RGA4_SOLBU^RGA4_SOLBU^Q:6-300,H:2-273^32.23%ID^E:6e-37^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^179-296^E:4.9e-26`PF13401.3^AAA_22^AAA domain^194-292^E:9.3e-07",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44738_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.04164234116271,{"v":7274987124.20645,"d":"7.27E+09"},"0.000117611862334482","TRINITY_DN44738_c0_g1_i5","CMT3_ARATH^CMT3_ARATH^Q:1401-301,H:447-812^61.41%ID^E:9e-153^RecName: Full=DNA (cytosine-5)-methyltransferase CMT3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44738_c0_g1_i5.p1","199-1278[-]","CMT3_ARATH^CMT3_ARATH^Q:1-326,H:488-812^60.24%ID^E:1e-132^RecName: Full=DNA (cytosine-5)-methyltransferase CMT3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00145.14^DNA_methylase^C-5 cytosine-specific DNA methylase^2-312^E:6.7e-26",".",".","COG0270^Cytosine-specific methyltransferase","KEGG:ath:AT1G69770`KO:K00558","GO:0005634^cellular_component^nucleus`GO:0003682^molecular_function^chromatin binding`GO:0003886^molecular_function^DNA (cytosine-5-)-methyltransferase activity`GO:0003677^molecular_function^DNA binding`GO:0090116^biological_process^C-5 methylation of cytosine`GO:0006342^biological_process^chromatin silencing`GO:0006306^biological_process^DNA methylation`GO:0010425^biological_process^DNA methylation on cytosine within a CNG sequence`GO:0051567^biological_process^histone H3-K9 methylation`GO:0045814^biological_process^negative regulation of gene expression, epigenetic`GO:0006351^biological_process^transcription, DNA-templated`GO:0010069^biological_process^zygote asymmetric cytokinesis in embryo sac",".",".","."]
["TRINITY_DN40913_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.04686228606759,"0.000310913634440473","0.000480568302770573","TRINITY_DN40913_c0_g1_i2","POK1_ARATH^POK1_ARATH^Q:202-3477,H:14-1048^52.19%ID^E:0^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`POK1_ARATH^POK1_ARATH^Q:3685-6279,H:1214-2066^40.77%ID^E:9e-157^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40913_c0_g1_i2.p1","163-6303[+]","POK1_ARATH^POK1_ARATH^Q:14-1105,H:14-1048^52.64%ID^E:0^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`POK1_ARATH^POK1_ARATH^Q:1175-2039,H:1214-2066^40.77%ID^E:2e-166^RecName: Full=Phragmoplast orienting kinesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16796.2^Microtub_bd^Microtubule binding^162-314^E:5.4e-22`PF00225.20^Kinesin^Kinesin motor domain^168-499^E:9.6e-109`PF06548.8^Kinesin-related^Kinesin-related^572-752^E:6.5e-18`PF12711.4^Kinesin-relat_1^Kinesin motor^633-718^E:2.6e-29",".",".","COG5059^Kinesin family member","KEGG:ath:AT3G17360`KO:K10400","GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0009524^cellular_component^phragmoplast`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0003777^molecular_function^microtubule motor activity`GO:0000911^biological_process^cytokinesis by cell plate formation`GO:0007018^biological_process^microtubule-based movement`GO:0000281^biological_process^mitotic cytokinesis","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN39586_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.05556536020576,"0.000138007223055267","0.000218885131127853","TRINITY_DN39586_c0_g1_i2","NIP61_ARATH^NIP61_ARATH^Q:165-1061,H:8-305^74.5%ID^E:7e-108^RecName: Full=Aquaporin NIP6-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39586_c0_g1_i2.p1","141-1064[+]","NIP61_ARATH^NIP61_ARATH^Q:9-307,H:8-305^74.92%ID^E:7e-153^RecName: Full=Aquaporin NIP6-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^75-283^E:4.7e-51",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT1G80760`KO:K09874","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0046715^molecular_function^borate transmembrane transporter activity`GO:0015254^molecular_function^glycerol channel activity`GO:0015168^molecular_function^glycerol transmembrane transporter activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0015250^molecular_function^water channel activity`GO:0035445^biological_process^borate transmembrane transport`GO:0046713^biological_process^borate transport`GO:0080029^biological_process^cellular response to boron-containing substance levels`GO:0015793^biological_process^glycerol transport`GO:0071918^biological_process^urea transmembrane transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44315_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.06286243537539,"0.000291991628616755","0.000452061218206174","TRINITY_DN44315_c0_g1_i11","RGA2_SOLBU^RGA2_SOLBU^Q:306-13,H:370-482^28.57%ID^E:4e-06^RecName: Full=Disease resistance protein RGA2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44315_c0_g1_i11.p1","1-312[-]","RGA2_SOLBU^RGA2_SOLBU^Q:3-100,H:370-482^28.57%ID^E:4e-06^RecName: Full=Disease resistance protein RGA2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN35271_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.06899241377996,"0.0023806864502472","0.00343161220545976","TRINITY_DN35271_c0_g1_i2","CMT3_ARATH^CMT3_ARATH^Q:244-2697,H:1-831^52.25%ID^E:0^RecName: Full=DNA (cytosine-5)-methyltransferase CMT3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35271_c0_g1_i2.p1","244-2730[+]","CMT3_ARATH^CMT3_ARATH^Q:1-818,H:1-831^53.25%ID^E:0^RecName: Full=DNA (cytosine-5)-methyltransferase CMT3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01426.15^BAH^BAH domain^101-208^E:5.5e-06`PF00385.21^Chromo^Chromo (CHRromatin Organisation MOdifier) domain^369-423^E:2.7e-11`PF00145.14^DNA_methylase^C-5 cytosine-specific DNA methylase^434-791^E:2.2e-31",".",".","COG0270^Cytosine-specific methyltransferase","KEGG:ath:AT1G69770`KO:K00558","GO:0005634^cellular_component^nucleus`GO:0003682^molecular_function^chromatin binding`GO:0003886^molecular_function^DNA (cytosine-5-)-methyltransferase activity`GO:0003677^molecular_function^DNA binding`GO:0090116^biological_process^C-5 methylation of cytosine`GO:0006342^biological_process^chromatin silencing`GO:0006306^biological_process^DNA methylation`GO:0010425^biological_process^DNA methylation on cytosine within a CNG sequence`GO:0051567^biological_process^histone H3-K9 methylation`GO:0045814^biological_process^negative regulation of gene expression, epigenetic`GO:0006351^biological_process^transcription, DNA-templated`GO:0010069^biological_process^zygote asymmetric cytokinesis in embryo sac","GO:0003682^molecular_function^chromatin binding",".","."]
["TRINITY_DN45344_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",-2.08188556625731,{"v":6874963996.01168,"d":"6.87E+09"},"0.000111289394125554","TRINITY_DN45344_c2_g4_i1","SD11_ARATH^SD11_ARATH^Q:547-107,H:671-815^54.05%ID^E:1e-41^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45344_c2_g4_i1.p1","104-547[-]","SD11_ARATH^SD11_ARATH^Q:1-147,H:671-815^54.05%ID^E:3e-42^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^1-98^E:5.4e-06`PF11883.5^DUF3403^Domain of unknown function (DUF3403)^103-147^E:2.3e-08",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0004674^molecular_function^protein serine/threonine kinase activity",".","."]
["TRINITY_DN41518_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.1017008394225,"0.000212145532416327","0.000332180987771975","TRINITY_DN41518_c0_g1_i6","MUS81_ARATH^MUS81_ARATH^Q:1845-613,H:1-417^41.55%ID^E:1e-87^RecName: Full=Crossover junction endonuclease MUS81;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41518_c0_g1_i6.p1","610-1845[-]","MUS81_ARATH^MUS81_ARATH^Q:1-411,H:1-417^42.05%ID^E:6e-91^RecName: Full=Crossover junction endonuclease MUS81;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1948^Excision repair cross-complementing rodent repair deficiency, complementation group 4","KEGG:ath:AT4G30870`KO:K08991","GO:0000794^cellular_component^condensed nuclear chromosome`GO:0005730^cellular_component^nucleolus`GO:0003677^molecular_function^DNA binding`GO:0004519^molecular_function^endonuclease activity`GO:0046872^molecular_function^metal ion binding`GO:0051301^biological_process^cell division`GO:0006974^biological_process^cellular response to DNA damage stimulus`GO:0051026^biological_process^chiasma assembly`GO:0006281^biological_process^DNA repair`GO:0000724^biological_process^double-strand break repair via homologous recombination`GO:0007067^biological_process^mitotic nuclear division`GO:0006312^biological_process^mitotic recombination",".",".","."]
["TRINITY_DN46373_c1_g6","leaves S. abrotanoides","roots S. abrotanoides",-2.1072207567198,"0.00160780979577445","0.00235097215985965","TRINITY_DN46373_c1_g6_i3","PME_PRUPE^PME_PRUPE^Q:75-284,H:49-116^60%ID^E:2e-14^RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN46373_c1_g6_i3.p1","3-362[+]","PME_PRUPE^PME_PRUPE^Q:5-94,H:27-116^50%ID^E:3e-17^RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","sigP:1^16^0.832^YES",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0045330^molecular_function^aspartyl esterase activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0045490^biological_process^pectin catabolic process",".",".","."]
["TRINITY_DN44991_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-2.11272389463985,"0.00190118469111947","0.00276430692157449","TRINITY_DN44991_c1_g3_i11","IQD1_ARATH^IQD1_ARATH^Q:391-1062,H:106-287^35.09%ID^E:3e-12^RecName: Full=Protein IQ-DOMAIN 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44991_c1_g3_i11.p2","844-1500[+]","IQD1_ARATH^IQD1_ARATH^Q:4-73,H:220-287^37.14%ID^E:4e-06^RecName: Full=Protein IQ-DOMAIN 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13178.3^DUF4005^Protein of unknown function (DUF4005)^121-180^E:3.4e-05",".",".","ENOG411040N^NA",".","GO:0005634^cellular_component^nucleus",".",".","."]
["TRINITY_DN44441_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.12028217466339,"0.0174448792182316","0.0230736186848686","TRINITY_DN44441_c4_g1_i1","HSP11_MEDSA^HSP11_MEDSA^Q:313-657,H:32-143^68.1%ID^E:7e-25^RecName: Full=18.1 kDa class I heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN44441_c4_g1_i1.p1","274-663[+]","HSP12_MEDSA^HSP12_MEDSA^Q:14-126,H:47-156^70.18%ID^E:1e-44^RecName: Full=18.2 kDa class I heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF00011.18^HSP20^Hsp20/alpha crystallin family^24-126^E:1.9e-28",".",".",".",".","GO:0005737^cellular_component^cytoplasm",".",".","."]
["TRINITY_DN28486_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.13172736901922,"0.00543142397059407","0.00758432853578671","TRINITY_DN28486_c0_g1_i2","BIG1B_ARATH^BIG1B_ARATH^Q:467-1231,H:104-365^36.67%ID^E:9e-18^RecName: Full=Protein BIG GRAIN 1-like B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28486_c0_g1_i2.p1","116-1249[+]","BIG1B_ARATH^BIG1B_ARATH^Q:10-372,H:12-365^38.95%ID^E:7e-37^RecName: Full=Protein BIG GRAIN 1-like B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YYWK^NA","KEGG:ath:AT1G54200","GO:0005886^cellular_component^plasma membrane`GO:0060918^biological_process^auxin transport`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0010929^biological_process^positive regulation of auxin mediated signaling pathway",".",".","."]
["TRINITY_DN46712_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-2.14710096418664,{"v":7614758172.53101,"d":"7.61E+09"},"0.000122966870931425","TRINITY_DN46712_c1_g3_i1","CRK2_ARATH^CRK2_ARATH^Q:895-215,H:30-257^56.14%ID^E:8e-80^RecName: Full=Cysteine-rich receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46712_c1_g3_i1.p1","188-979[-]","CRK2_ARATH^CRK2_ARATH^Q:4-255,H:2-257^51.17%ID^E:1e-86^RecName: Full=Cysteine-rich receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01657.14^Stress-antifung^Salt stress response/antifungal^45-131^E:5.4e-12`PF01657.14^Stress-antifung^Salt stress response/antifungal^152-240^E:1.3e-10","sigP:1^28^0.73^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G70520","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006952^biological_process^defense response`GO:0046777^biological_process^protein autophosphorylation`GO:0010193^biological_process^response to ozone",".",".","."]
["TRINITY_DN39758_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.15698528962694,"0.000566196359881688","0.000858480339016626","TRINITY_DN39758_c0_g1_i2","PAO1_ARATH^PAO1_ARATH^Q:319-1197,H:20-309^75.77%ID^E:1e-155^RecName: Full=Polyamine oxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39758_c0_g1_i2.p1","253-1212[+]","PAO1_ARATH^PAO1_ARATH^Q:23-319,H:20-313^75.08%ID^E:3e-159^RecName: Full=Polyamine oxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01494.16^FAD_binding_3^FAD binding domain^6-36^E:1.9e-05`PF00890.21^FAD_binding_2^FAD binding domain^9-45^E:0.00016`PF13450.3^NAD_binding_8^NAD(P)-binding Rossmann-like domain^11-79^E:3.6e-16`PF01593.21^Amino_oxidase^Flavin containing amine oxidoreductase^16-293^E:3.3e-44",".",".","ENOG410XSNC^amine oxidase","KEGG:ath:AT5G13700`KO:K13366","GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0052895^molecular_function^N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity`GO:0052894^molecular_function^norspermine:oxygen oxidoreductase activity`GO:0046592^molecular_function^polyamine oxidase activity`GO:0052901^molecular_function^spermine:oxygen oxidoreductase (spermidine-forming) activity`GO:0006598^biological_process^polyamine catabolic process`GO:0046208^biological_process^spermine catabolic process","GO:0071949^molecular_function^FAD binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43658_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.15934044509998,"0.000358614181811308","0.000551464712783683","TRINITY_DN43658_c0_g1_i4","SBT43_ARATH^SBT43_ARATH^Q:1781-108,H:170-725^50.62%ID^E:9e-166^RecName: Full=Subtilisin-like protease SBT4.3 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43658_c0_g1_i4.p1","90-728[-]","SBT44_ARATH^SBT44_ARATH^Q:1-207,H:529-738^48.11%ID^E:2e-61^RecName: Full=Subtilisin-like protease SBT4.4 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00082.19^Peptidase_S8^Subtilase family^1-51^E:4.1e-09",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT5G59100","GO:0004252^molecular_function^serine-type endopeptidase activity","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN44555_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.17736200171672,"0.00146978654666679","0.00215513601110451","TRINITY_DN44555_c0_g1_i1","ATL1_ARATH^ATL1_ARATH^Q:1116-319,H:41-335^45.72%ID^E:2e-66^RecName: Full=RING-H2 finger protein ATL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44555_c0_g1_i1.p1","211-1182[-]","ATL1_ARATH^ATL1_ARATH^Q:22-311,H:40-364^44.31%ID^E:1e-69^RecName: Full=RING-H2 finger protein ATL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^115-158^E:7.4e-14`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^115-158^E:5.6e-10`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^115-157^E:6.1e-08`PF17123.2^zf-RING_11^RING-like zinc finger^116-144^E:1.2e-11`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^116-157^E:3.2e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^116-155^E:6.4e-05`PF12861.4^zf-ANAPC11^Anaphase-promoting complex subunit 11 RING-H2 finger^128-161^E:0.00014",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT1G04360","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0005680^cellular_component^anaphase-promoting complex",".","."]
["TRINITY_DN45643_c8_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.19822321495471,0,0,"TRINITY_DN45643_c8_g1_i1","PALY_DIGLA^PALY_DIGLA^Q:2129-381,H:130-713^91.27%ID^E:0^RecName: Full=Phenylalanine ammonia-lyase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Digitalideae; Digitalis",".","TRINITY_DN45643_c8_g1_i1.p1","378-2051[-]","PALY_DIGLA^PALY_DIGLA^Q:1-557,H:156-713^91.04%ID^E:0^RecName: Full=Phenylalanine ammonia-lyase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Digitalideae; Digitalis","PF00221.16^Lyase_aromatic^Aromatic amino acid lyase^1-371^E:2.2e-128",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0045548^molecular_function^phenylalanine ammonia-lyase activity`GO:0009800^biological_process^cinnamic acid biosynthetic process`GO:0006559^biological_process^L-phenylalanine catabolic process",".",".","."]
["TRINITY_DN37248_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.2240864478758,"0.00190392363473052","0.00276799261427267","TRINITY_DN37248_c0_g1_i1","WEE1_ARATH^WEE1_ARATH^Q:1117-1698,H:304-499^71.21%ID^E:6e-148^RecName: Full=Wee1-like protein kinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WEE1_ARATH^WEE1_ARATH^Q:174-1043,H:7-305^46.2%ID^E:6e-148^RecName: Full=Wee1-like protein kinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37248_c0_g1_i1.p1","183-1064[+]","WEE1_ARATH^WEE1_ARATH^Q:25-287,H:30-305^50.18%ID^E:2e-80^RecName: Full=Wee1-like protein kinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^231-286^E:7.2e-07",".",".","ENOG410XS1M^Protein kinase, membrane associated tyrosine threonine 1","KEGG:ath:AT1G02970`KO:K06632","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0004715^molecular_function^non-membrane spanning protein tyrosine kinase activity`GO:0004672^molecular_function^protein kinase activity`GO:0007050^biological_process^cell cycle arrest`GO:0051301^biological_process^cell division`GO:0000076^biological_process^DNA replication checkpoint`GO:0007067^biological_process^mitotic nuclear division","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45160_c5_g2","leaves S. abrotanoides","roots S. abrotanoides",-2.22681350952978,{"v":8362599277.74933,"d":"8.36E+09"},"0.000134709721761639","TRINITY_DN45160_c5_g2_i1","GATA7_ARATH^GATA7_ARATH^Q:1062-349,H:10-231^42.62%ID^E:8e-43^RecName: Full=GATA transcription factor 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45160_c5_g2_i1.p1","298-1140[-]","GATA5_ARATH^GATA5_ARATH^Q:77-279,H:94-332^49.59%ID^E:9e-58^RecName: Full=GATA transcription factor 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00320.24^GATA^GATA zinc finger^199-233^E:1.3e-17",".",".","COG5641^Transcription factor","KEGG:ath:AT5G66320","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003682^molecular_function^chromatin binding`GO:0000977^molecular_function^RNA polymerase II regulatory region sequence-specific DNA binding`GO:0001085^molecular_function^RNA polymerase II transcription factor binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0001228^molecular_function^transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding`GO:0008270^molecular_function^zinc ion binding`GO:0030154^biological_process^cell differentiation`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0006366^biological_process^transcription from RNA polymerase II promoter","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44969_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-2.22728375436812,"0.0121881700897006","0.0164197904932732","TRINITY_DN44969_c3_g2_i1","IP5P6_ARATH^IP5P6_ARATH^Q:397-2214,H:1-617^62.82%ID^E:0^RecName: Full=Type IV inositol polyphosphate 5-phosphatase 6 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44969_c3_g2_i1.p1","397-2217[+]","IP5P6_ARATH^IP5P6_ARATH^Q:1-606,H:1-617^64.48%ID^E:0^RecName: Full=Type IV inositol polyphosphate 5-phosphatase 6 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03372.20^Exo_endo_phos^Endonuclease/Exonuclease/phosphatase family^337-559^E:8.4e-35",".",".","COG5411^inositol","KEGG:ath:AT1G05470","GO:0005622^cellular_component^intracellular`GO:0046030^molecular_function^inositol trisphosphate phosphatase activity`GO:0034485^molecular_function^phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity`GO:0004439^molecular_function^phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0030154^biological_process^cell differentiation`GO:0010588^biological_process^cotyledon vascular tissue pattern formation`GO:0046855^biological_process^inositol phosphate dephosphorylation`GO:0048016^biological_process^inositol phosphate-mediated signaling`GO:0032957^biological_process^inositol trisphosphate metabolic process`GO:0010305^biological_process^leaf vascular tissue pattern formation`GO:0046856^biological_process^phosphatidylinositol dephosphorylation`GO:0010067^biological_process^procambium histogenesis`GO:0009737^biological_process^response to abscisic acid`GO:0010051^biological_process^xylem and phloem pattern formation",".",".","."]
["TRINITY_DN40108_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.23802753750452,"0.000285624453310204","0.000442578904764221","TRINITY_DN40108_c0_g1_i3","FBK61_ARATH^FBK61_ARATH^Q:1177-458,H:3-244^25.1%ID^E:2e-09^RecName: Full=Putative F-box/kelch-repeat protein At3g17570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40108_c0_g1_i3.p1","83-1375[-]","FBK61_ARATH^FBK61_ARATH^Q:67-306,H:3-244^25.1%ID^E:8e-10^RecName: Full=Putative F-box/kelch-repeat protein At3g17570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^68-104^E:0.00036",".",".","ENOG41118Y7^F-box associated","KEGG:ath:AT3G17570",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45771_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.2582637075282,"0.00569778707156253","0.00793846053630796","TRINITY_DN45771_c0_g1_i1","SABP2_TOBAC^SABP2_TOBAC^Q:71-829,H:6-259^49.41%ID^E:8e-80^RecName: Full=Salicylic acid-binding protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45771_c0_g1_i1.p1","53-838[+]","SABP2_TOBAC^SABP2_TOBAC^Q:3-259,H:2-259^49.03%ID^E:3e-81^RecName: Full=Salicylic acid-binding protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^5-111^E:1.3e-11`PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^7-165^E:1.7e-15`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^9-249^E:4.4e-18",".",".",".",".","GO:0016298^molecular_function^lipase activity`GO:0080031^molecular_function^methyl salicylate esterase activity`GO:0008152^biological_process^metabolic process`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway",".",".","."]
["TRINITY_DN15924_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.29798677632491,"0.00229104723583175","0.00330692881022513","TRINITY_DN15924_c0_g1_i1","BAG3_ARATH^BAG3_ARATH^Q:131-508,H:15-140^39.06%ID^E:2e-16^RecName: Full=BAG family molecular chaperone regulator 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN15924_c0_g1_i1.p1","2-517[+]","BAG3_ARATH^BAG3_ARATH^Q:44-169,H:15-140^39.06%ID^E:3e-20^RecName: Full=BAG family molecular chaperone regulator 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14560.3^Ubiquitin_2^Ubiquitin-like domain^79-124^E:0.19`PF00240.20^ubiquitin^Ubiquitin family^85-141^E:5.1e-08",".",".","ENOG4111WNH^BCL-2-associated athanogene","KEGG:ath:AT5G07220",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN58909_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.29922500261679,"0.000217619199822071","0.000340537547787174","TRINITY_DN58909_c0_g1_i1","KIP1_PETIN^KIP1_PETIN^Q:3450-2050,H:1-455^52.55%ID^E:4e-143^RecName: Full=Kinase-interacting protein 1 {ECO:0000303|PubMed:11500547};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia`KIP1_PETIN^KIP1_PETIN^Q:1140-82,H:617-974^54.05%ID^E:2e-107^RecName: Full=Kinase-interacting protein 1 {ECO:0000303|PubMed:11500547};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN58909_c0_g1_i1.p1","31-3450[-]","KIP1_PETIN^KIP1_PETIN^Q:1-467,H:1-455^52.98%ID^E:7e-150^RecName: Full=Kinase-interacting protein 1 {ECO:0000303|PubMed:11500547};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia`KIP1_PETIN^KIP1_PETIN^Q:768-1123,H:614-974^53.89%ID^E:4e-109^RecName: Full=Kinase-interacting protein 1 {ECO:0000303|PubMed:11500547};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF07765.9^KIP1^KIP1-like protein^11-84^E:1.8e-34",".",".",".",".","GO:0005737^cellular_component^cytoplasm","GO:0003779^molecular_function^actin binding",".","."]
["TRINITY_DN44843_c2_g4","leaves S. abrotanoides","roots S. abrotanoides",-2.31218678293006,{"v":7113852779.13299,"d":"7.11E+09"},"0.00011507480544128","TRINITY_DN44843_c2_g4_i3","R1B16_SOLDE^R1B16_SOLDE^Q:3-1418,H:778-1243^29.52%ID^E:6e-34^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44843_c2_g4_i3.p1","3-1865[+]","R1B16_SOLDE^R1B16_SOLDE^Q:1-472,H:778-1243^29.52%ID^E:2e-37^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF09011.7^HMG_box_2^HMG-box domain^521-591^E:3.8e-11`PF00505.16^HMG_box^HMG (high mobility group) box^524-590^E:9.6e-14",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN43370_c3_g13","leaves S. abrotanoides","roots S. abrotanoides",-2.31886467510733,"0.000388020368965638","0.00059501381886017","TRINITY_DN43370_c3_g13_i1","ABR1_ARATH^ABR1_ARATH^Q:757-930,H:192-249^89.66%ID^E:2e-19^RecName: Full=Ethylene-responsive transcription factor ABR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43370_c3_g13_i1.p1","334-933[+]","EF114_ARATH^EF114_ARATH^Q:43-194,H:30-149^48.37%ID^E:3e-32^RecName: Full=Ethylene-responsive transcription factor ERF114;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^134-183^E:2.3e-14",".",".","ENOG410YY7D^Transcription factor","KEGG:ath:AT5G61890","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0050832^biological_process^defense response to fungus`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN41055_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.33445446837175,"0.000308791717622422","0.000477342418632425","TRINITY_DN41055_c0_g1_i4","PER48_ARATH^PER48_ARATH^Q:435-277,H:311-365^41.82%ID^E:2e-08^RecName: Full=Putative Peroxidase 48;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PER48_ARATH^PER48_ARATH^Q:268-182,H:369-399^48.39%ID^E:2e-08^RecName: Full=Putative Peroxidase 48;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41055_c0_g1_i4.p1","127-534[-]","PER48_ARATH^PER48_ARATH^Q:1-86,H:265-365^35.64%ID^E:3e-06^RecName: Full=Putative Peroxidase 48;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^21-86^E:2.4e-07",".",".","ENOG410YD1D^peroxidase","KEGG:ath:AT4G33870`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN36041_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.337178286555,"0.000839670597588802","0.00125718737895862","TRINITY_DN36041_c0_g1_i2","TRA1_MAIZE^TRA1_MAIZE^Q:558-1592,H:141-489^30.11%ID^E:9e-33^RecName: Full=Putative AC transposase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN36041_c0_g1_i2.p2","837-1178[+]","TRA1_MAIZE^TRA1_MAIZE^Q:2-111,H:236-342^39.09%ID^E:3e-18^RecName: Full=Putative AC transposase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".",".",".",".",".","GO:0003677^molecular_function^DNA binding`GO:0006310^biological_process^DNA recombination`GO:0032196^biological_process^transposition",".",".","."]
["TRINITY_DN41388_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.33762068063455,"0.00039262382083408","0.000601803419305884","TRINITY_DN41388_c0_g1_i1","HIDM_GLYEC^HIDM_GLYEC^Q:221-1180,H:11-327^50.15%ID^E:3e-96^RecName: Full=2-hydroxyisoflavanone dehydratase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Galegeae; Glycyrrhiza",".","TRINITY_DN41388_c0_g1_i1.p1","203-1189[+]","HIDM_GLYEC^HIDM_GLYEC^Q:7-326,H:11-327^50.15%ID^E:1e-113^RecName: Full=2-hydroxyisoflavanone dehydratase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Galegeae; Glycyrrhiza","PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^81-306^E:4.8e-42",".",".",".",".","GO:0033987^molecular_function^2-hydroxyisoflavanone dehydratase activity`GO:0052689^molecular_function^carboxylic ester hydrolase activity`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0009717^biological_process^isoflavonoid biosynthetic process`GO:0046287^biological_process^isoflavonoid metabolic process","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN9867_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.35162301006201,"0.000567221852584404","0.00085989237609028","TRINITY_DN9867_c0_g1_i2","Y5986_ARATH^Y5986_ARATH^Q:995-276,H:141-388^33.72%ID^E:5e-26^RecName: Full=Uncharacterized protein At5g39865;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN9867_c0_g1_i2.p1","270-1235[-]","Y5986_ARATH^Y5986_ARATH^Q:60-320,H:125-388^34.91%ID^E:3e-38^RecName: Full=Uncharacterized protein At5g39865;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00462.21^Glutaredoxin^Glutaredoxin^165-235^E:3.6e-10`PF04908.12^SH3BGR^SH3-binding, glutamic acid-rich protein^167-255^E:0.00027",".",".","ENOG4111HAI^Glutaredoxin","KEGG:ath:AT5G39865","GO:0005886^cellular_component^plasma membrane`GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN45213_c4_g3","leaves S. abrotanoides","roots S. abrotanoides",-2.36656103195325,"0.000540806995769412","0.000821166572316392","TRINITY_DN45213_c4_g3_i1","YLS9_ARATH^YLS9_ARATH^Q:335-772,H:54-200^30.46%ID^E:3e-11^RecName: Full=Protein YLS9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45213_c4_g3_i1.p1","53-850[+]","YLS9_ARATH^YLS9_ARATH^Q:55-240,H:17-200^30.73%ID^E:6e-17^RecName: Full=Protein YLS9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03168.10^LEA_2^Late embryogenesis abundant protein^137-239^E:1.5e-12",".",".","ENOG410YGQV^harpin-induced protein 1 domain containing protein, expressed","KEGG:ath:AT2G35980","GO:0046658^cellular_component^anchored component of plasma membrane`GO:0009507^cellular_component^chloroplast`GO:0009506^cellular_component^plasmodesma`GO:0004871^molecular_function^signal transducer activity`GO:0051607^biological_process^defense response to virus`GO:0010150^biological_process^leaf senescence`GO:0051707^biological_process^response to other organism`GO:0007165^biological_process^signal transduction",".",".","."]
["TRINITY_DN44453_c5_g6","leaves S. abrotanoides","roots S. abrotanoides",-2.37083349036529,0,0,"TRINITY_DN44453_c5_g6_i1","U496D_ORYSJ^U496D_ORYSJ^Q:1621-773,H:36-285^23.34%ID^E:6e-10^RecName: Full=UPF0496 protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44453_c5_g6_i1.p1","590-1759[-]","U496D_ORYSJ^U496D_ORYSJ^Q:47-329,H:36-285^23.69%ID^E:1e-12^RecName: Full=UPF0496 protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF05633.8^DUF793^Protein of unknown function (DUF793)^17-382^E:1.7e-165",".",".","ENOG410YDX5^protein BPS1, chloroplastic-like","KEGG:osa:4349103","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN42742_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.38182761332444,"0.000128957206552426","0.000204911227704119","TRINITY_DN42742_c0_g1_i1","TCX2_ARATH^TCX2_ARATH^Q:2361-217,H:1-674^42.59%ID^E:8e-119^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42742_c0_g1_i1.p1","214-2409[-]","TCX2_ARATH^TCX2_ARATH^Q:17-731,H:1-674^42.46%ID^E:2e-143^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^451-486^E:6.4e-12`PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^536-572^E:7.1e-12",".",".","ENOG4110UR5^Tesmin TSO1-like CXC domain containing protein","KEGG:ath:AT4G14770","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0007275^biological_process^multicellular organism development",".",".","."]
["TRINITY_DN57610_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.40266778288857,"0.00028725880482845","0.000444985452996405","TRINITY_DN57610_c0_g1_i1","SCP28_ARATH^SCP28_ARATH^Q:1331-18,H:24-462^61.76%ID^E:0^RecName: Full=Serine carboxypeptidase-like 28;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN57610_c0_g1_i1.p1","15-1421[-]","SCP28_ARATH^SCP28_ARATH^Q:23-468,H:14-462^60.67%ID^E:0^RecName: Full=Serine carboxypeptidase-like 28;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^51-459^E:1.4e-136","sigP:1^31^0.511^YES",".","COG2939^carboxy-peptidase","KEGG:ath:AT2G35770`KO:K16297","GO:0005576^cellular_component^extracellular region`GO:0005773^cellular_component^vacuole`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN39716_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.42202522450895,"0.000960011719867594","0.00142986135029286","TRINITY_DN39716_c0_g1_i4","ATK4_ARATH^ATK4_ARATH^Q:2819-1587,H:328-742^60.1%ID^E:4e-153^RecName: Full=Kinesin-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39716_c0_g1_i4.p1","1503-3170[-]","ATK4_ARATH^ATK4_ARATH^Q:118-528,H:328-742^60.1%ID^E:1e-159^RecName: Full=Kinesin-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14295.3^PAN_4^PAN domain^94-117^E:0.0028`PF16796.2^Microtub_bd^Microtubule binding^166-326^E:8.5e-45`PF00225.20^Kinesin^Kinesin motor domain^220-506^E:3.6e-98",".",".","COG5059^Kinesin family member","KEGG:ath:AT5G27000`KO:K10406","GO:0005737^cellular_component^cytoplasm`GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0007018^biological_process^microtubule-based movement","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN43375_c4_g7","leaves S. abrotanoides","roots S. abrotanoides",-2.42768447761379,"0.000184298285633113","0.000289737051067375","TRINITY_DN43375_c4_g7_i1","AB10G_ARATH^AB10G_ARATH^Q:1935-127,H:1-589^57.77%ID^E:0^RecName: Full=ABC transporter G family member 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43375_c4_g7_i1.p1","121-1977[-]","AB10G_ARATH^AB10G_ARATH^Q:15-617,H:1-589^57.77%ID^E:0^RecName: Full=ABC transporter G family member 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^68-214^E:7.6e-28`PF01061.21^ABC2_membrane^ABC-2 type transporter^343-556^E:6.1e-43`PF06422.9^PDR_CDR^CDR ABC transporter^566-609^E:1.4e-05",".",".","COG1131^(ABC) transporter","KEGG:ath:AT1G53270","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0016020^cellular_component^membrane`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47562_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-2.4577721077464,"0.000330288194434806","0.000509106762071956","TRINITY_DN47562_c0_g3_i2","SD18_ARATH^SD18_ARATH^Q:2-772,H:285-519^30.77%ID^E:8e-33^RecName: Full=Receptor-like serine/threonine-protein kinase SD1-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47562_c0_g3_i2.p1","2-613[+]","SD11_ARATH^SD11_ARATH^Q:1-154,H:281-434^39.1%ID^E:5e-32^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00954.17^S_locus_glycop^S-locus glycoprotein domain^1-43^E:3.3e-11`PF08276.8^PAN_2^PAN-like domain^65-131^E:4.1e-19",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen",".","."]
["TRINITY_DN47368_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-2.4699860530897,0,0,"TRINITY_DN47368_c2_g2_i7","METE_PLESU^METE_PLESU^Q:1109-2074,H:1-321^89.44%ID^E:0^RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Solenostemon",".","TRINITY_DN47368_c2_g2_i7.p1","1109-2173[+]","METE_PLESU^METE_PLESU^Q:1-334,H:1-330^87.72%ID^E:0^RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Solenostemon","PF08267.9^Meth_synt_1^Cobalamin-independent synthase, N-terminal domain^3-316^E:5.9e-118",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0003871^molecular_function^5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009086^biological_process^methionine biosynthetic process","GO:0003871^molecular_function^5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0008652^biological_process^cellular amino acid biosynthetic process",".","."]
["TRINITY_DN8710_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.47458028988428,"0.00125201669924602","0.00184610270181755","TRINITY_DN8710_c0_g1_i1","LOR6_ARATH^LOR6_ARATH^Q:89-679,H:4-191^52.53%ID^E:5e-65^RecName: Full=Protein LURP-one-related 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN8710_c0_g1_i1.p1","62-682[+]","LOR6_ARATH^LOR6_ARATH^Q:10-206,H:4-191^52.53%ID^E:6e-66^RecName: Full=Protein LURP-one-related 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04525.9^LOR^LURP-one-related^10-195^E:8.4e-40",".",".","ENOG410YHS0^LURP-one-related","KEGG:ath:AT2G05910",".",".",".","."]
["TRINITY_DN42114_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.50631061104651,"0.000102626481522882","0.000164225160328487","TRINITY_DN42114_c0_g1_i1","C3H62_ORYSJ^C3H62_ORYSJ^Q:1396-737,H:122-338^55.45%ID^E:3e-63^RecName: Full=Zinc finger CCCH domain-containing protein 62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42114_c0_g1_i1.p1","173-1630[-]","C3H62_ORYSJ^C3H62_ORYSJ^Q:2-298,H:46-338^46.62%ID^E:4e-74^RecName: Full=Zinc finger CCCH domain-containing protein 62;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02037.24^SAP^SAP domain^91-122^E:3.1e-07`PF00642.21^zf-CCCH^Zinc finger C-x8-C-x5-C-x3-H type (and similar)^457-480^E:1.8e-05`PF14608.3^zf-CCCH_2^RNA-binding, Nab2-type zinc finger^461-480^E:0.025",".",".","ENOG410YC7U^zinc finger CCCH domain-containing protein","KEGG:osa:4348530","GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47200_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-2.52235182200183,"0.000785028903719243","0.00117808113501091","TRINITY_DN47200_c0_g3_i1","Y5389_ARATH^Y5389_ARATH^Q:3-767,H:476-729^54.96%ID^E:5e-85^RecName: Full=Probable receptor-like protein kinase At5g38990;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47200_c0_g3_i1.p1","3-794[+]","Y5389_ARATH^Y5389_ARATH^Q:1-255,H:476-729^54.96%ID^E:4e-85^RecName: Full=Probable receptor-like protein kinase At5g38990;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^54-257^E:1.1e-43`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^56-253^E:8.3e-44",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G38990","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN41966_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-2.56696535190842,"0.000479059994282922","0.000730203163008586","TRINITY_DN41966_c0_g2_i1","LIN1_LOTJA^LIN1_LOTJA^Q:1366-230,H:812-1181^32.11%ID^E:1e-21^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:1660-1439,H:512-584^52.7%ID^E:5e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:2602-2231,H:114-267^32.47%ID^E:1e-12^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN41966_c0_g2_i1.p1","212-3601[-]","LIN1_LOTJA^LIN1_LOTJA^Q:746-1124,H:812-1181^32.11%ID^E:2e-34^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:648-721,H:512-584^52.7%ID^E:3e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:286-457,H:75-267^31.68%ID^E:3e-14^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus","PF04564.12^U-box^U-box domain^647-719^E:6.5e-08",".",".",".",".","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0009877^biological_process^nodulation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN46044_c4_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.57301461370687,"0.000703028201126435","0.00105827174050053","TRINITY_DN46044_c4_g1_i4","MLO4_ARATH^MLO4_ARATH^Q:1623-148,H:6-450^48.18%ID^E:2e-124^RecName: Full=MLO-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46044_c4_g1_i4.p1","661-1632[-]","MLO4_ARATH^MLO4_ARATH^Q:4-309,H:6-295^50.49%ID^E:7e-88^RecName: Full=MLO-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03094.12^Mlo^Mlo family^7-309^E:5e-92",".",".","ENOG410YDUG^May be involved in modulation of pathogen defense and leaf cell death (By similarity)","KEGG:ath:AT1G11000`KO:K08472","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN74769_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.57780468491632,"0.00500117469127304","0.00700461186492402","TRINITY_DN74769_c0_g1_i1","CVIF2_ARATH^CVIF2_ARATH^Q:227-673,H:30-178^54.36%ID^E:1e-45^RecName: Full=Cell wall / vacuolar inhibitor of fructosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN74769_c0_g1_i1.p1","149-682[+]","CVIF2_ARATH^CVIF2_ARATH^Q:1-175,H:1-178^51.4%ID^E:5e-57^RecName: Full=Cell wall / vacuolar inhibitor of fructosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04043.12^PMEI^Plant invertase/pectin methylesterase inhibitor^26-170^E:7.9e-25","sigP:1^17^0.875^YES",".","ENOG410YWNR^cell wall vacuolar inhibitor of fructosidase","KEGG:ath:AT5G64620","GO:0005773^cellular_component^vacuole`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0043086^biological_process^negative regulation of catalytic activity`GO:0080167^biological_process^response to karrikin","GO:0004857^molecular_function^enzyme inhibitor activity",".","."]
["TRINITY_DN28781_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.59832072254245,"0.000134285006109353","0.00021314203120174","TRINITY_DN28781_c0_g1_i1","E2FE_ARATH^E2FE_ARATH^Q:1376-333,H:32-396^49.86%ID^E:4e-101^RecName: Full=E2F transcription factor-like E2FE;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28781_c0_g1_i1.p1","318-1436[-]","E2FE_ARATH^E2FE_ARATH^Q:21-368,H:32-396^52.72%ID^E:4e-116^RecName: Full=E2F transcription factor-like E2FE;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02319.17^E2F_TDP^E2F/DP family winged-helix DNA-binding domain^24-88^E:7.5e-20`PF02319.17^E2F_TDP^E2F/DP family winged-helix DNA-binding domain^152-232^E:1.3e-18",".",".","ENOG4111IGY^E2F transcription factor","KEGG:ath:AT3G48160","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0042023^biological_process^DNA endoreduplication`GO:0032876^biological_process^negative regulation of DNA endoreduplication`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0005667^cellular_component^transcription factor complex",".","."]
["TRINITY_DN47234_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.60144818597359,"0.000151444298909272","0.000239544945257798","TRINITY_DN47234_c2_g1_i1","SURF1_ARATH^SURF1_ARATH^Q:1173-355,H:65-343^30.14%ID^E:4e-24^RecName: Full=Surfeit locus protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47234_c2_g1_i1.p1","325-1299[-]","SURF1_ARATH^SURF1_ARATH^Q:43-315,H:65-343^30.82%ID^E:7e-27^RecName: Full=Surfeit locus protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02104.12^SURF1^SURF1 family^66-309^E:1.3e-12",".",".","COG3346^Surfeit locus 1 family protein","KEGG:ath:AT3G17910`KO:K14998","GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN27839_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.60388675221717,"0.000139814937006815","0.00022164187517209","TRINITY_DN27839_c0_g1_i1","GAT18_ARATH^GAT18_ARATH^Q:448-1131,H:40-295^44.4%ID^E:4e-45^RecName: Full=GATA transcription factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN27839_c0_g1_i1.p1","424-1134[+]","GAT18_ARATH^GAT18_ARATH^Q:9-236,H:40-295^46.1%ID^E:1e-55^RecName: Full=GATA transcription factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00320.24^GATA^GATA zinc finger^112-146^E:5.3e-18",".",".","COG5641^Transcription factor","KEGG:ath:AT3G50870","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003682^molecular_function^chromatin binding`GO:0000977^molecular_function^RNA polymerase II regulatory region sequence-specific DNA binding`GO:0001085^molecular_function^RNA polymerase II transcription factor binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0001228^molecular_function^transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding`GO:0008270^molecular_function^zinc ion binding`GO:0030154^biological_process^cell differentiation`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0009909^biological_process^regulation of flower development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006366^biological_process^transcription from RNA polymerase II promoter","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN26392_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.64294091555061,"0.00064481166478348","0.000973313368434267","TRINITY_DN26392_c0_g1_i2","BRCA1_ARATH^BRCA1_ARATH^Q:1574-276,H:528-937^50.67%ID^E:3e-104^RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog {ECO:0000303|PubMed:12582233};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BRCA1_ARATH^BRCA1_ARATH^Q:3206-2265,H:1-326^43.58%ID^E:4e-66^RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog {ECO:0000303|PubMed:12582233};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN26392_c0_g1_i2.p1","246-3206[-]","BRCA1_ARATH^BRCA1_ARATH^Q:1-981,H:1-941^40.95%ID^E:0^RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog {ECO:0000303|PubMed:12582233};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13920.3^zf-C3HC4_3^Zinc finger, C3HC4 type (RING finger)^13-59^E:1.6e-08`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^15-53^E:2.9e-10`PF13639.3^zf-RING_2^Ring finger domain^15-54^E:9e-09`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^16-51^E:2.3e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^16-53^E:5.5e-08`PF15227.3^zf-C3HC4_4^zinc finger of C3HC4-type, RING^16-53^E:2.1e-07`PF13832.3^zf-HC5HC2H_2^PHD-zinc-finger like domain^621-686^E:6.2e-07`PF13771.3^zf-HC5HC2H^PHD-like zinc-binding domain^626-704^E:2.4e-09`PF00533.23^BRCT^BRCA1 C Terminus (BRCT) domain^755-833^E:1e-08",".",".","ENOG4111WR7^E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability. Regulates centrosomal microtubule nucleation. Required for normal cell cycle progression from G2 to mitosis. Required for appropriate cell cycle arrests after ionizing irradiation in both the S-phase and the G2 phase of the cell cycle. Involved in transcriptional regulation of P21 in response to DNA damage. Required for FANCD2 targeting to sites of DNA damage. May function as a transcriptional regulator. Inhibits lipid synthesis by binding to inactive phosphorylated ACACA and preventing its dephosphorylation. Contributes to homologous recombination repair (HRR) via its direct interaction with PALB2, fine-tunes recombinational repair partly through its modulatory role in the PALB2-dependent loading of BRCA2-RAD51 repair machinery at DNA breaks. Component of the BRCA1-RBBP8 complex which regulates CHEK1 activation and controls cell cycle G2 M checkpoints on DNA damage via BRCA1-mediated ubiquitination of RBBP8 (By similarity)","KEGG:ath:AT4G21070`KO:K10683","GO:0070531^cellular_component^BRCA1-A complex`GO:0031436^cellular_component^BRCA1-BARD1 complex`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0071480^biological_process^cellular response to gamma radiation`GO:0006310^biological_process^DNA recombination`GO:0006281^biological_process^DNA repair`GO:0000724^biological_process^double-strand break repair via homologous recombination`GO:0045717^biological_process^negative regulation of fatty acid biosynthetic process`GO:0035067^biological_process^negative regulation of histone acetylation`GO:0071158^biological_process^positive regulation of cell cycle arrest`GO:0035066^biological_process^positive regulation of histone acetylation`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0016567^biological_process^protein ubiquitination`GO:0042127^biological_process^regulation of cell proliferation`GO:0010332^biological_process^response to gamma radiation","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47069_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-2.65867514439204,"0.000273386223952607","0.000424339442614038","TRINITY_DN47069_c0_g2_i2","AMT31_ORYSJ^AMT31_ORYSJ^Q:1008-298,H:247-477^63.71%ID^E:2e-87^RecName: Full=Ammonium transporter 3 member 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47069_c0_g2_i2.p1","247-1008[-]","AMT31_ORYSJ^AMT31_ORYSJ^Q:1-237,H:247-477^63.71%ID^E:6e-102^RecName: Full=Ammonium transporter 3 member 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00909.18^Ammonium_transp^Ammonium Transporter Family^1-219^E:3.3e-41",".",".","COG0004^ammonium Transporter","KEGG:osa:4324937`KO:K03320","GO:0005887^cellular_component^integral component of plasma membrane`GO:0008519^molecular_function^ammonium transmembrane transporter activity`GO:0072488^biological_process^ammonium transmembrane transport`GO:0006995^biological_process^cellular response to nitrogen starvation`GO:0019740^biological_process^nitrogen utilization`GO:0015695^biological_process^organic cation transport","GO:0008519^molecular_function^ammonium transmembrane transporter activity`GO:0015696^biological_process^ammonium transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45476_c0_g7","leaves S. abrotanoides","roots S. abrotanoides",-2.68193760328223,"0.000100128785104059","0.000160350109509589","TRINITY_DN45476_c0_g7_i1","SD17_ARATH^SD17_ARATH^Q:348-37,H:736-843^42.59%ID^E:2e-15^RecName: Full=Receptor-like serine/threonine-protein kinase SD1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45476_c0_g7_i1.p1","34-354[-]","SD17_ARATH^SD17_ARATH^Q:3-106,H:736-843^42.59%ID^E:1e-15^RecName: Full=Receptor-like serine/threonine-protein kinase SD1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G65790","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0071215^biological_process^cellular response to abscisic acid stimulus`GO:0006952^biological_process^defense response`GO:0046777^biological_process^protein autophosphorylation`GO:0006468^biological_process^protein phosphorylation`GO:0048544^biological_process^recognition of pollen",".",".","."]
["TRINITY_DN42294_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.69554333533811,{"v":6414408138.78652,"d":"6.41E+09"},"0.00010409870092123","TRINITY_DN42294_c0_g1_i5","AGD3_ARATH^AGD3_ARATH^Q:2-2335,H:72-818^57.38%ID^E:0^RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42294_c0_g1_i5.p1","491-2347[+]","AGD3_ARATH^AGD3_ARATH^Q:1-615,H:195-818^60.72%ID^E:0^RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00169.26^PH^PH domain^100-235^E:4.2e-12`PF01412.15^ArfGap^Putative GTPase activating protein for Arf^299-432^E:5.9e-34`PF00023.27^Ank^Ankyrin repeat^525-556^E:6.8e-06`PF13606.3^Ank_3^Ankyrin repeat^525-553^E:0.0008`PF13637.3^Ank_4^Ankyrin repeats (many copies)^528-579^E:1.1e-09`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^530-611^E:1.1e-10`PF00023.27^Ank^Ankyrin repeat^559-590^E:2.2e-05",".",".","COG5347^domain, ankyrin repeat and PH domain","KEGG:ath:AT5G13300`KO:K12489","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0030140^cellular_component^trans-Golgi network transport vesicle`GO:0005096^molecular_function^GTPase activator activity`GO:0046872^molecular_function^metal ion binding`GO:0035091^molecular_function^phosphatidylinositol binding`GO:0006897^biological_process^endocytosis`GO:0009965^biological_process^leaf morphogenesis`GO:0010087^biological_process^phloem or xylem histogenesis`GO:0043547^biological_process^positive regulation of GTPase activity`GO:0009733^biological_process^response to auxin`GO:0010051^biological_process^xylem and phloem pattern formation","GO:0005096^molecular_function^GTPase activator activity`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN39536_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.72038887481063,{"v":9362904164.32857,"d":"9.36E+09"},"0.00015026632559595","TRINITY_DN39536_c0_g1_i1","TCX2_ARATH^TCX2_ARATH^Q:2361-1435,H:246-500^42.12%ID^E:3e-60^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TCX2_ARATH^TCX2_ARATH^Q:813-619,H:612-672^54.55%ID^E:4e-06^RecName: Full=Protein tesmin/TSO1-like CXC 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39536_c0_g1_i1.p1","550-3303[-]","TSO1_ARATH^TSO1_ARATH^Q:9-723,H:8-620^30.07%ID^E:1e-71^RecName: Full=CRC domain-containing protein TSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^495-530^E:2e-11`PF03638.12^TCR^Tesmin/TSO1-like CXC domain, cysteine-rich domain^583-618^E:2.4e-11",".",".","ENOG4110UR5^Tesmin TSO1-like CXC domain containing protein","KEGG:ath:AT3G22780","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0048444^biological_process^floral organ morphogenesis`GO:0051302^biological_process^regulation of cell division`GO:0009934^biological_process^regulation of meristem structural organization`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN43793_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.73635701807979,{"v":8442815365.91325,"d":"8.44E+09"},"0.000135937915661082","TRINITY_DN43793_c0_g1_i2","DTX21_ARATH^DTX21_ARATH^Q:328-861,H:301-478^57.3%ID^E:4e-75^RecName: Full=Protein DETOXIFICATION 21 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX21_ARATH^DTX21_ARATH^Q:3-260,H:215-300^56.98%ID^E:4e-75^RecName: Full=Protein DETOXIFICATION 21 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43793_c0_g1_i2.p1","229-876[+]","DTX21_ARATH^DTX21_ARATH^Q:34-211,H:301-478^57.3%ID^E:5e-63^RecName: Full=Protein DETOXIFICATION 21 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^34-162^E:2e-21",".",".","COG0534^Mate efflux family protein",".","GO:0016021^cellular_component^integral component of membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47476_c0_g4","leaves S. abrotanoides","roots S. abrotanoides",-2.78098453795725,"0.00014059363036734","0.000222780821731894","TRINITY_DN47476_c0_g4_i2","CYPH1_SALMI^CYPH1_SALMI^Q:1-381,H:179-318^40.71%ID^E:3e-30^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN47476_c0_g4_i2.p1","1-381[+]","CYPH1_SALMI^CYPH1_SALMI^Q:1-127,H:179-318^40.71%ID^E:3e-30^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF00067.19^p450^Cytochrome P450^5-127^E:9.4e-14",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN19983_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.92220745522246,"0.00089461275055337","0.00133645286134222","TRINITY_DN19983_c0_g1_i1","B120_ARATH^B120_ARATH^Q:57-665,H:616-816^57.14%ID^E:1e-72^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase B120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN19983_c0_g1_i1.p1","3-503[+]","B120_ARATH^B120_ARATH^Q:19-163,H:616-759^64.83%ID^E:6e-59^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase B120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^25-133^E:5.8e-25`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^26-135^E:6.7e-24",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G21390","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006952^biological_process^defense response`GO:0006468^biological_process^protein phosphorylation`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN40465_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.92668340403046,"0.000581895291738711","0.000881307454296523","TRINITY_DN40465_c0_g1_i1","ERG14_ARATH^ERG14_ARATH^Q:1557-217,H:75-527^69.23%ID^E:0^RecName: Full=Squalene epoxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40465_c0_g1_i1.p2","148-813[-]","ERG1_PANGI^ERG1_PANGI^Q:1-197,H:309-538^69.57%ID^E:1e-107^RecName: Full=Squalene monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF08491.7^SE^Squalene epoxidase^1-164^E:1.4e-70",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0004506^molecular_function^squalene monooxygenase activity","GO:0004506^molecular_function^squalene monooxygenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45252_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",-2.92754261926217,"0.000344409076368948","0.000530156486492265","TRINITY_DN45252_c1_g4_i5","DTX24_ARATH^DTX24_ARATH^Q:133-1365,H:30-440^56.93%ID^E:4e-139^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45252_c1_g4_i5.p1","76-1434[+]","DTX24_ARATH^DTX24_ARATH^Q:20-430,H:30-440^56.93%ID^E:3e-164^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^37-197^E:1.2e-20`PF01554.15^MatE^MatE^259-419^E:7.2e-22",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT3G03620`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN41473_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.99471034977034,"0.000487772960546142","0.000742904887848879","TRINITY_DN41473_c0_g1_i1","Y3126_ARATH^Y3126_ARATH^Q:1388-1720,H:109-212^28.83%ID^E:2e-07^RecName: Full=Uncharacterized protein At3g61260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41473_c0_g1_i1.p1","314-1741[+]","Y3126_ARATH^Y3126_ARATH^Q:359-469,H:109-212^28.83%ID^E:1e-07^RecName: Full=Uncharacterized protein At3g61260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03763.10^Remorin_C^Remorin, C-terminal region^353-453^E:4.2e-24",".",".","ENOG410YI71^Remorin family","KEGG:ath:AT3G61260","GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole",".",".","."]
["TRINITY_DN57286_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-2.99498160584026,"0.000155424092409457","0.000245598587480419","TRINITY_DN57286_c0_g1_i1","GAI1_VITVI^GAI1_VITVI^Q:1457-342,H:213-575^38.42%ID^E:4e-75^RecName: Full=DELLA protein GAI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN57286_c0_g1_i1.p1","336-1799[-]","GAI1_VITVI^GAI1_VITVI^Q:113-486,H:211-575^38.48%ID^E:4e-82^RecName: Full=DELLA protein GAI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF03514.11^GRAS^GRAS domain family^116-486^E:1.3e-115",".",".","ENOG410YBFY^DELLA protein","KEGG:vvi:100232937`KO:K14494","GO:0005634^cellular_component^nucleus`GO:0000989^molecular_function^transcription factor activity, transcription factor binding`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45333_c0_g5","leaves S. abrotanoides","roots S. abrotanoides",-3.00091358321844,"0.000157401799276208","0.000248680675604685","TRINITY_DN45333_c0_g5_i1","COL5_ARATH^COL5_ARATH^Q:983-1225,H:281-348^38.27%ID^E:2e-08^RecName: Full=Zinc finger protein CONSTANS-LIKE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45333_c0_g5_i1.p1","383-1294[+]","COL5_ARATH^COL5_ARATH^Q:201-281,H:281-348^38.27%ID^E:8e-09^RecName: Full=Zinc finger protein CONSTANS-LIKE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06203.11^CCT^CCT motif^205-247^E:8.8e-19",".",".","COG5641^Transcription factor","KEGG:ath:AT5G57660","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0009909^biological_process^regulation of flower development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009416^biological_process^response to light stimulus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46042_c0_g6","leaves S. abrotanoides","roots S. abrotanoides",-3.03204746114515,"0.000139995462643584","0.000221897184161221","TRINITY_DN46042_c0_g6_i1","3AT_PERFR^3AT_PERFR^Q:19-408,H:1-130^66.92%ID^E:4e-56^RecName: Full=Anthocyanidin 3-O-glucoside 6''-O-acyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Elsholtzieae; Perilla",".","TRINITY_DN46042_c0_g6_i1.p1","1-408[+]","3AT_PERFR^3AT_PERFR^Q:7-136,H:1-130^66.92%ID^E:4e-56^RecName: Full=Anthocyanidin 3-O-glucoside 6''-O-acyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Elsholtzieae; Perilla","PF02458.12^Transferase^Transferase family^20-82^E:1.4e-06",".",".",".",".","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0009718^biological_process^anthocyanin-containing compound biosynthetic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN46144_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",-3.04429558721416,{"v":94715476.89453,"d":"9.47E+07"},"0.000151938717270235","TRINITY_DN46144_c3_g4_i2","R1B23_SOLDE^R1B23_SOLDE^Q:1-681,H:661-897^31.05%ID^E:3e-17^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46144_c3_g4_i2.p1","91-723[+]","RP8L4_ARATH^RP8L4_ARATH^Q:6-203,H:383-588^26.07%ID^E:2e-11^RecName: Full=Probable disease resistance RPP8-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^3-68^E:2.1e-08",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT5G48620","GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47690_c1_g4","leaves S. abrotanoides","roots S. abrotanoides",-3.0891661633428,"0.000936972297590317","0.00139767458870816","TRINITY_DN47690_c1_g4_i1","DRL4_ARATH^DRL4_ARATH^Q:209-1117,H:2-295^34.08%ID^E:3e-39^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47690_c1_g4_i1.p1","203-1123[+]","DRL4_ARATH^DRL4_ARATH^Q:3-305,H:2-295^36.54%ID^E:4e-46^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^174-303^E:8.9e-26",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G50180","GO:0009506^cellular_component^plasmodesma`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47131_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.09401264680362,0,0,"TRINITY_DN47131_c1_g1_i2","SUS2_SOLTU^SUS2_SOLTU^Q:508-2922,H:1-805^88.2%ID^E:0^RecName: Full=Sucrose synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47131_c1_g1_i2.p1","5458-10671[-]","EMB8_PICGL^EMB8_PICGL^Q:128-487,H:68-436^29.76%ID^E:3e-38^RecName: Full=Embryogenesis-associated protein EMB8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Pinales; Pinaceae; Picea",".",".",".",".",".","GO:0052689^molecular_function^carboxylic ester hydrolase activity",".",".","."]
["TRINITY_DN47057_c0_g3","leaves S. abrotanoides","roots S. abrotanoides",-3.15287246567441,0,0,"TRINITY_DN47057_c0_g3_i1","PRU1_PRUAR^PRU1_PRUAR^Q:296-778,H:1-160^57.14%ID^E:1e-49^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN47057_c0_g3_i1.p1","296-781[+]","PRU1_PRUAR^PRU1_PRUAR^Q:1-161,H:1-160^57.14%ID^E:6e-60^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^1-155^E:9.3e-26",".",".",".",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN41091_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.17143387727154,"0.000120651387913958","0.000192204139580425","TRINITY_DN41091_c0_g1_i3","ESP1_ARATH^ESP1_ARATH^Q:966-4628,H:837-2170^39.16%ID^E:0^RecName: Full=Separase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ESP1_ARATH^ESP1_ARATH^Q:131-970,H:542-825^38.68%ID^E:0^RecName: Full=Separase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41091_c0_g1_i3.p1","873-4634[+]","ESP1_ARATH^ESP1_ARATH^Q:32-1253,H:837-2171^39.13%ID^E:0^RecName: Full=Separase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03568.14^Peptidase_C50^Peptidase family C50^800-940^E:9.5e-14`PF03568.14^Peptidase_C50^Peptidase family C50^942-1181^E:1.6e-76",".",".","COG5155^extra spindle pole bodies homolog 1 (S. cerevisiae)","KEGG:ath:AT4G22970`KO:K02365","GO:0005737^cellular_component^cytoplasm`GO:0005874^cellular_component^microtubule`GO:0072686^cellular_component^mitotic spindle`GO:0005634^cellular_component^nucleus`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0008233^molecular_function^peptidase activity`GO:0051304^biological_process^chromosome separation`GO:0000911^biological_process^cytokinesis by cell plate formation`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0009960^biological_process^endosperm development`GO:0006887^biological_process^exocytosis`GO:0051307^biological_process^meiotic chromosome separation`GO:0007067^biological_process^mitotic nuclear division`GO:1901970^biological_process^positive regulation of mitotic sister chromatid separation`GO:0045876^biological_process^positive regulation of sister chromatid cohesion`GO:2000114^biological_process^regulation of establishment of cell polarity`GO:0009826^biological_process^unidimensional cell growth`GO:0016192^biological_process^vesicle-mediated transport","GO:0008233^molecular_function^peptidase activity`GO:0006508^biological_process^proteolysis`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN87658_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.2281878578786,{"v":8790406740.09939,"d":"8.79E+09"},"0.000141351640004781","TRINITY_DN87658_c0_g1_i1","PER1_ARAHY^PER1_ARAHY^Q:1082-132,H:1-316^58.18%ID^E:2e-124^RecName: Full=Cationic peroxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis",".","TRINITY_DN87658_c0_g1_i1.p1","129-1091[-]","PER1_ARAHY^PER1_ARAHY^Q:4-320,H:1-316^58.18%ID^E:4e-125^RecName: Full=Cationic peroxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis","PF00141.20^peroxidase^Peroxidase^45-283^E:2.5e-72","sigP:1^25^0.912^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN41221_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-3.40001833861658,{"v":8169519893.27638,"d":"8.17E+09"},"0.00013166144619951","TRINITY_DN41221_c0_g2_i1","CCA31_ARATH^CCA31_ARATH^Q:1366-278,H:1-346^57.81%ID^E:8e-146^RecName: Full=Putative cyclin-A3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41221_c0_g2_i1.p1","245-1366[-]","CCA32_ARATH^CCA32_ARATH^Q:1-366,H:1-366^56.72%ID^E:2e-151^RecName: Full=Cyclin-A3-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^105-233^E:1.4e-41`PF02984.16^Cyclin_C^Cyclin, C-terminal domain^236-358^E:7.1e-33",".",".","COG5024^g2 mitotic-specific","KEGG:ath:AT1G47210`KO:K06627","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division","GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN45249_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.40377077677599,0,0,"TRINITY_DN45249_c0_g1_i1","DIR11_ARATH^DIR11_ARATH^Q:298-732,H:49-191^46.21%ID^E:9e-34^RecName: Full=Dirigent protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45249_c0_g1_i1.p1","163-780[+]","DIR11_ARATH^DIR11_ARATH^Q:46-190,H:49-191^46.21%ID^E:3e-35^RecName: Full=Dirigent protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^48-190^E:1.6e-40","sigP:1^26^0.821^YES",".","ENOG410YZUA^Disease resistance response protein","KEGG:ath:AT1G22900","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN45481_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.41840337819592,"0.000255811330421103","0.000397982027209878","TRINITY_DN45481_c0_g1_i1","NAC98_ARATH^NAC98_ARATH^Q:289-1230,H:13-374^47.04%ID^E:4e-95^RecName: Full=Protein CUP-SHAPED COTYLEDON 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45481_c0_g1_i1.p1","259-1233[+]","NAC98_ARATH^NAC98_ARATH^Q:11-324,H:13-374^48.68%ID^E:2e-102^RecName: Full=Protein CUP-SHAPED COTYLEDON 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^16-142^E:4.1e-28",".",".","ENOG410Y9VP^Protein CUP-SHAPED COTYLEDON","KEGG:ath:AT5G53950","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010160^biological_process^formation of organ boundary`GO:0048366^biological_process^leaf development`GO:0010072^biological_process^primary shoot apical meristem specification`GO:0048504^biological_process^regulation of timing of organ formation`GO:0010223^biological_process^secondary shoot formation`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44987_c3_g4","leaves S. abrotanoides","roots S. abrotanoides",-3.49355323426627,"0.0105847269635678","0.0143564108397333","TRINITY_DN44987_c3_g4_i1","R1C3_SOLDE^R1C3_SOLDE^Q:11-325,H:665-766^42.86%ID^E:8e-14^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44987_c3_g4_i1.p1","2-328[+]","R1C3_SOLDE^R1C3_SOLDE^Q:4-108,H:665-766^42.86%ID^E:2e-19^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^3-109^E:1e-22",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47346_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.49667330024995,"0.0117065036995066","0.015801212145886","TRINITY_DN47346_c0_g1_i1","BH036_ARATH^BH036_ARATH^Q:245-346,H:1-34^73.53%ID^E:2e-09^RecName: Full=Transcription factor bHLH36;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47346_c0_g1_i1.p1","2-346[+]","BH036_ARATH^BH036_ARATH^Q:82-115,H:1-34^73.53%ID^E:1e-09^RecName: Full=Transcription factor bHLH36;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^83-111^E:1.6e-06",".",".","ENOG411077S^Helix-loop-helix DNA-binding domain","KEGG:ath:AT5G51780","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN46915_c1_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.52308750909125,0,0,"TRINITY_DN46915_c1_g1_i7","XTH9_ARATH^XTH9_ARATH^Q:871-161,H:58-289^71.73%ID^E:9e-125^RecName: Full=Xyloglucan endotransglucosylase/hydrolase protein 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46915_c1_g1_i7.p1","149-946[-]","XTH9_ARATH^XTH9_ARATH^Q:26-262,H:58-289^71.73%ID^E:2e-125^RecName: Full=Xyloglucan endotransglucosylase/hydrolase protein 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00722.18^Glyco_hydro_16^Glycosyl hydrolases family 16^24-175^E:1.4e-51`PF06955.9^XET_C^Xyloglucan endo-transglycosylase (XET) C-terminus^213-257^E:6.9e-17","sigP:1^27^0.589^YES",".","ENOG410YBFU^xyloglucan endotransglucosylase hydrolase protein",".","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0016762^molecular_function^xyloglucan:xyloglucosyl transferase activity`GO:0042546^biological_process^cell wall biogenesis`GO:0071555^biological_process^cell wall organization`GO:0010411^biological_process^xyloglucan metabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process`GO:0016762^molecular_function^xyloglucan:xyloglucosyl transferase activity`GO:0006073^biological_process^cellular glucan metabolic process`GO:0005618^cellular_component^cell wall`GO:0048046^cellular_component^apoplast",".","."]
["TRINITY_DN87832_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.54918934512073,"0.000660478957211041","0.000996193626290826","TRINITY_DN87832_c0_g1_i1","WTR45_ARATH^WTR45_ARATH^Q:1211-156,H:2-353^53.87%ID^E:4e-105^RecName: Full=WAT1-related protein At5g64700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87832_c0_g1_i1.p1","132-1208[-]","WTR45_ARATH^WTR45_ARATH^Q:1-351,H:3-353^54.57%ID^E:1e-121^RecName: Full=WAT1-related protein At5g64700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00892.17^EamA^EamA-like transporter family^6-144^E:1.2e-09`PF00892.17^EamA^EamA-like transporter family^176-314^E:1.7e-14",".",".","ENOG410Y944^EamA-like transporter family","KEGG:ath:AT5G64700","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47340_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-3.58111942037152,"0.00786631748422144","0.0108036599293026","TRINITY_DN47340_c3_g2_i1","XTH33_ARATH^XTH33_ARATH^Q:1-324,H:68-175^74.07%ID^E:2e-57^RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase protein 33;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47340_c3_g2_i1.p1","1-324[+]","XTH33_ARATH^XTH33_ARATH^Q:1-108,H:68-175^74.07%ID^E:2e-57^RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase protein 33;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00722.18^Glyco_hydro_16^Glycosyl hydrolases family 16^1-107^E:1e-31",".",".","COG2273^hydrolase family 16","KEGG:ath:AT1G10550`KO:K08235","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005887^cellular_component^integral component of plasma membrane`GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0016762^molecular_function^xyloglucan:xyloglucosyl transferase activity`GO:0042546^biological_process^cell wall biogenesis`GO:0009831^biological_process^plant-type cell wall modification involved in multidimensional cell growth`GO:0010411^biological_process^xyloglucan metabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45635_c5_g6","leaves S. abrotanoides","roots S. abrotanoides",-3.58968094077124,"0.000181389889167254","0.000285312156646959","TRINITY_DN45635_c5_g6_i1","PPDEX_ARATH^PPDEX_ARATH^Q:341-760,H:30-169^54.29%ID^E:1e-56^RecName: Full=DeSI-like protein At4g17486;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45635_c5_g6_i1.p1","134-958[+]","PPDEX_ARATH^PPDEX_ARATH^Q:68-208,H:28-168^54.61%ID^E:2e-59^RecName: Full=DeSI-like protein At4g17486;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05903.11^Peptidase_C97^PPPDE putative peptidase domain^68-201^E:1.9e-45",".",".","ENOG4111H3Z^Desumoylating isopeptidase",".","GO:0008233^molecular_function^peptidase activity",".",".","."]
["TRINITY_DN45679_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.65586447976856,"0.00046477268222688","0.000708859884004604","TRINITY_DN45679_c0_g1_i4","CCD31_ARATH^CCD31_ARATH^Q:797-177,H:48-250^51.44%ID^E:5e-67^RecName: Full=Cyclin-D3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45679_c0_g1_i4.p1","93-974[-]","CCD31_ARATH^CCD31_ARATH^Q:22-266,H:16-250^49.19%ID^E:2e-72^RecName: Full=Cyclin-D3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^96-201^E:4.4e-23`PF02984.16^Cyclin_C^Cyclin, C-terminal domain^203-279^E:6e-11",".",".","ENOG410XRKC^(DC) complex that phosphorylates and inhibits members of the retinoblastoma (RB) protein family including RB1 and regulates the cell-cycle during G(1) S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB E2F complex and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also substrate for SMAD3, phosphorylating SMAD3 in a cell-cycle-dependent manner and repressing its transcriptional activity. Component of the ternary complex, cyclin","KEGG:ath:AT4G34160`KO:K14505","GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0000082^biological_process^G1/S transition of mitotic cell cycle`GO:0007067^biological_process^mitotic nuclear division`GO:0009735^biological_process^response to cytokinin`GO:0009744^biological_process^response to sucrose`GO:0048316^biological_process^seed development","GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN44987_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-3.72734876024722,"0.00439691729673056","0.006191545116547","TRINITY_DN44987_c2_g2_i1","R1B16_SOLDE^R1B16_SOLDE^Q:6-473,H:824-993^30.68%ID^E:1e-10^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44987_c2_g2_i1.p1","3-485[+]","R1B16_SOLDE^R1B16_SOLDE^Q:2-157,H:824-993^30.68%ID^E:1e-10^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46545_c1_g6","leaves S. abrotanoides","roots S. abrotanoides",-3.73064599700169,"0.000167812753054741","0.00026462520108828","TRINITY_DN46545_c1_g6_i1","CDC6B_ARATH^CDC6B_ARATH^Q:1470-73,H:35-499^58.3%ID^E:0^RecName: Full=Cell division control protein 6 homolog B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46545_c1_g6_i1.p1","46-1542[-]","CDC6B_ARATH^CDC6B_ARATH^Q:25-490,H:35-499^58.3%ID^E:0^RecName: Full=Cell division control protein 6 homolog B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13401.3^AAA_22^AAA domain^137-255^E:5.4e-16`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^143-279^E:0.00018`PF09079.8^Cdc6_C^CDC6, C terminal winged helix domain^406-484^E:4.4e-19",".",".","COG1474^Involved in regulation of DNA replication (By similarity)","KEGG:ath:AT1G07270`KO:K02213","GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0006270^biological_process^DNA replication initiation","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN43094_c1_g3","leaves S. abrotanoides","roots S. abrotanoides",-3.79664542892859,"0.000123378559090658","0.000196354474228728","TRINITY_DN43094_c1_g3_i1","WLIM1_ARATH^WLIM1_ARATH^Q:106-621,H:3-176^79.89%ID^E:2e-99^RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WLIM1_ARATH^WLIM1_ARATH^Q:106-366,H:103-188^40.23%ID^E:4e-14^RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43094_c1_g3_i1.p1","91-714[+]","WLIM1_ARATH^WLIM1_ARATH^Q:6-177,H:3-176^79.89%ID^E:1e-101^RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WLIM1_ARATH^WLIM1_ARATH^Q:6-92,H:103-188^40.23%ID^E:7e-15^RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00412.19^LIM^LIM domain^13-67^E:4.5e-10`PF00412.19^LIM^LIM domain^111-165^E:2.8e-10",".",".","COG5069^Microtubule associated monoxygenase, calponin and LIM domain containing","KEGG:ath:AT1G10200","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005886^cellular_component^plasma membrane`GO:0051015^molecular_function^actin filament binding`GO:0008270^molecular_function^zinc ion binding`GO:0051017^biological_process^actin filament bundle assembly","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN43730_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.83021934549738,0,0,"TRINITY_DN43730_c0_g1_i7","TRM32_ARATH^TRM32_ARATH^Q:1647-1102,H:386-549^34.05%ID^E:4e-15^RecName: Full=Protein TRM32;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43730_c0_g1_i7.p1","1093-3168[-]","TRM32_ARATH^TRM32_ARATH^Q:224-689,H:131-549^25.9%ID^E:1e-16^RecName: Full=Protein TRM32;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14309.3^DUF4378^Domain of unknown function (DUF4378)^523-687^E:1.5e-28",".",".","ENOG410YHUX^NA","KEGG:ath:AT1G07620",".",".",".","."]
["TRINITY_DN45579_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.87069662911246,{"v":7675320497.52595,"d":"7.68E+09"},"0.000123915630672574","TRINITY_DN45579_c0_g1_i1","ACOC_CUCMA^ACOC_CUCMA^Q:487-1698,H:50-453^91.09%ID^E:0^RecName: Full=Aconitate hydratase, cytoplasmic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita`ACOC_CUCMA^ACOC_CUCMA^Q:341-487,H:1-49^79.59%ID^E:2e-16^RecName: Full=Aconitate hydratase, cytoplasmic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita",".","TRINITY_DN45579_c0_g1_i1.p1","649-1698[+]","ACOC_CUCMA^ACOC_CUCMA^Q:1-350,H:104-453^91.43%ID^E:0^RecName: Full=Aconitate hydratase, cytoplasmic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita","PF00330.17^Aconitase^Aconitase family (aconitate hydratase)^1-350^E:3.5e-124",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0003994^molecular_function^aconitate hydratase activity`GO:0046872^molecular_function^metal ion binding`GO:0006097^biological_process^glyoxylate cycle","GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44768_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-3.88241917959973,"0.00235185689168431","0.00339094867654758","TRINITY_DN44768_c3_g2_i1","LBD12_ARATH^LBD12_ARATH^Q:783-274,H:1-193^65.15%ID^E:7e-71^RecName: Full=LOB domain-containing protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44768_c3_g2_i1.p1","271-783[-]","LBD12_ARATH^LBD12_ARATH^Q:1-170,H:1-193^66.16%ID^E:2e-76^RecName: Full=LOB domain-containing protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03195.11^DUF260^Protein of unknown function DUF260^7-104^E:2.3e-43",".",".","ENOG410YM9V^LOB domain-containing protein","KEGG:ath:AT2G30130","GO:0003677^molecular_function^DNA binding`GO:0009965^biological_process^leaf morphogenesis`GO:0010016^biological_process^shoot system morphogenesis",".",".","."]
["TRINITY_DN41334_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-3.94596324934423,"0.00178138106665125","0.0025953475790429","TRINITY_DN41334_c0_g1_i1","GRXS6_ARATH^GRXS6_ARATH^Q:613-308,H:1-102^56.86%ID^E:1e-37^RecName: Full=Monothiol glutaredoxin-S6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41334_c0_g1_i1.p1","305-613[-]","GRXS6_ARATH^GRXS6_ARATH^Q:1-102,H:1-102^56.86%ID^E:1e-39^RecName: Full=Monothiol glutaredoxin-S6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00462.21^Glutaredoxin^Glutaredoxin^13-75^E:3e-09",".",".","COG0695^Glutaredoxin","KEGG:ath:AT3G62930","GO:0005737^cellular_component^cytoplasm`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0046872^molecular_function^metal ion binding`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN47500_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-3.97607950573386,"0.00156029092921617","0.00228331800527609","TRINITY_DN47500_c3_g2_i1","CBDAS_CANSA^CBDAS_CANSA^Q:606-253,H:426-539^61.34%ID^E:2e-41^RecName: Full=Cannabidiolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis",".","TRINITY_DN47500_c3_g2_i1.p1","223-606[-]","CBDAS_CANSA^CBDAS_CANSA^Q:1-118,H:426-539^61.34%ID^E:1e-42^RecName: Full=Cannabidiolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis","PF08031.9^BBE^Berberine and berberine like^56-116^E:3.4e-23",".",".",".",".","GO:0048046^cellular_component^apoplast`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43800_c5_g2","leaves S. abrotanoides","roots S. abrotanoides",-4.02971468555985,0,0,"TRINITY_DN43800_c5_g2_i5","TKTC_SOLTU^TKTC_SOLTU^Q:217-2250,H:64-740^87.76%ID^E:0^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN43800_c5_g2_i5.p1","46-2256[+]","TKTC_SOLTU^TKTC_SOLTU^Q:1-735,H:1-740^83.49%ID^E:0^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00456.18^Transketolase_N^Transketolase, thiamine diphosphate binding domain^78-409^E:4.7e-155`PF02779.21^Transket_pyr^Transketolase, pyrimidine binding domain^427-597^E:5.5e-44`PF02780.17^Transketolase_C^Transketolase, C-terminal domain^622-728^E:6.2e-10",".",".","COG0021^Transketolase","KEGG:sot:102591899`KO:K00615","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0046872^molecular_function^metal ion binding`GO:0004802^molecular_function^transketolase activity`GO:0019253^biological_process^reductive pentose-phosphate cycle",".",".","."]
["TRINITY_DN46474_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.04894797996192,0,0,"TRINITY_DN46474_c0_g1_i22","GLUT1_ARATH^GLUT1_ARATH^Q:6810-4489,H:323-1096^86.3%ID^E:0^RecName: Full=Glutamate synthase 1 [NADH], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLUT1_ARATH^GLUT1_ARATH^Q:4418-2781,H:1097-1642^88.46%ID^E:0^RecName: Full=Glutamate synthase 1 [NADH], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLUT1_ARATH^GLUT1_ARATH^Q:2315-1020,H:1690-2121^87.04%ID^E:0^RecName: Full=Glutamate synthase 1 [NADH], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLUT1_ARATH^GLUT1_ARATH^Q:8058-7255,H:64-330^80.6%ID^E:2e-129^RecName: Full=Glutamate synthase 1 [NADH], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLUT1_ARATH^GLUT1_ARATH^Q:849-607,H:2123-2203^66.67%ID^E:1e-23^RecName: Full=Glutamate synthase 1 [NADH], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46474_c0_g1_i22.p1","4441-6834[-]","GLUT1_ARATH^GLUT1_ARATH^Q:9-782,H:323-1096^86.3%ID^E:0^RecName: Full=Glutamate synthase 1 [NADH], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00310.18^GATase_2^Glutamine amidotransferases class-II^14-230^E:3.9e-106`PF04898.11^Glu_syn_central^Glutamate synthase central domain^280-568^E:2.5e-115`PF01645.14^Glu_synthase^Conserved region in glutamate synthase^634-782^E:4.3e-47",".",".","COG0067^glutamate synthase`COG0069^glutamate synthase`COG0070^glutamate synthase`COG0493^metal cluster binding","KEGG:ath:AT5G53460`KO:K00264","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0051538^molecular_function^3 iron, 4 sulfur cluster binding`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0010181^molecular_function^FMN binding`GO:0016040^molecular_function^glutamate synthase (NADH) activity`GO:0005506^molecular_function^iron ion binding`GO:0019676^biological_process^ammonia assimilation cycle`GO:0048589^biological_process^developmental growth`GO:0006537^biological_process^glutamate biosynthetic process`GO:0097054^biological_process^L-glutamate biosynthetic process`GO:0046686^biological_process^response to cadmium ion`GO:0009735^biological_process^response to cytokinin","GO:0015930^molecular_function^glutamate synthase activity`GO:0006807^biological_process^nitrogen compound metabolic process`GO:0055114^biological_process^oxidation-reduction process`GO:0016638^molecular_function^oxidoreductase activity, acting on the CH-NH2 group of donors`GO:0006537^biological_process^glutamate biosynthetic process",".","."]
["TRINITY_DN41443_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.05850264852769,"0.00101290377870556","0.00150601857915482","TRINITY_DN41443_c0_g1_i2","Y2913_ARATH^Y2913_ARATH^Q:6-338,H:72-193^43.55%ID^E:8e-18^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41443_c0_g1_i2.p1","3-338[+]","Y2913_ARATH^Y2913_ARATH^Q:2-112,H:72-193^43.55%ID^E:7e-18^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^2-98^E:5.2e-24",".",".","ENOG410YEQP^serine threonine-protein kinase","KEGG:ath:AT2G19130","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen",".",".","."]
["TRINITY_DN45861_c2_g6","leaves S. abrotanoides","roots S. abrotanoides",-4.11322175271669,0,0,"TRINITY_DN45861_c2_g6_i2","4CL_VANPL^4CL_VANPL^Q:1975-578,H:10-478^80.81%ID^E:0^RecName: Full=4-coumarate--CoA ligase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae; Vanilloideae; Vanilleae; Vanilla`4CL_VANPL^4CL_VANPL^Q:467-285,H:480-540^90.16%ID^E:3e-25^RecName: Full=4-coumarate--CoA ligase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae; Vanilloideae; Vanilleae; Vanilla",".","TRINITY_DN45861_c2_g6_i2.p1","575-1990[-]","4CL1_TOBAC^4CL1_TOBAC^Q:1-471,H:3-474^80.17%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00501.25^AMP-binding^AMP-binding enzyme^33-444^E:4.4e-110",".",".",".",".","GO:0016207^molecular_function^4-coumarate-CoA ligase activity`GO:0005524^molecular_function^ATP binding`GO:0009698^biological_process^phenylpropanoid metabolic process","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN121038_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.33026242865192,"0.000228733637274226","0.000357235680686713","TRINITY_DN121038_c0_g1_i1","NO93_SOYBN^NO93_SOYBN^Q:516-229,H:9-104^78.12%ID^E:5e-30^RecName: Full=Early nodulin-93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN121038_c0_g1_i1.p1","220-534[-]","NO93_SOYBN^NO93_SOYBN^Q:7-102,H:9-104^78.12%ID^E:1e-37^RecName: Full=Early nodulin-93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF03386.11^ENOD93^Early nodulin 93 ENOD93 protein^17-94^E:1.2e-39",".",".",".","KEGG:gmx:547773","GO:0016021^cellular_component^integral component of membrane`GO:0009877^biological_process^nodulation",".",".","."]
["TRINITY_DN44018_c8_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.3404095511861,"0.000147116701874532","0.000232861077886145","TRINITY_DN44018_c8_g1_i1","LOB_ARATH^LOB_ARATH^Q:1-321,H:73-184^44.54%ID^E:3e-18^RecName: Full=Protein LATERAL ORGAN BOUNDARIES;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44018_c8_g1_i1.p2","1-336[+]","LOB_ARATH^LOB_ARATH^Q:1-108,H:73-185^44.17%ID^E:1e-19^RecName: Full=Protein LATERAL ORGAN BOUNDARIES;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03195.11^DUF260^Protein of unknown function DUF260^1-36^E:2.9e-09",".",".","ENOG4111S1U^lob domain-containing protein","KEGG:ath:AT5G63090","GO:0010199^biological_process^organ boundary specification between lateral organs and the meristem",".",".","."]
["TRINITY_DN44519_c3_g6","leaves S. abrotanoides","roots S. abrotanoides",-4.35978027418724,0,0,"TRINITY_DN44519_c3_g6_i1","OSS2_PEA^OSS2_PEA^Q:352-915,H:23-179^31.61%ID^E:4e-19^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:730-1014,H:67-165^35.35%ID^E:4e-13^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:661-1032,H:17-145^30.6%ID^E:6e-09^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44519_c3_g6_i1.p1","292-1026[+]","OSS2_PEA^OSS2_PEA^Q:15-208,H:17-179^30.65%ID^E:7e-21^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:147-241,H:67-165^35.35%ID^E:5e-14^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:124-244,H:17-142^30.53%ID^E:2e-09^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF10950.5^DUF2775^Protein of unknown function (DUF2775)^23-137^E:1.3e-22`PF10950.5^DUF2775^Protein of unknown function (DUF2775)^142-184^E:2.1e-11`PF10950.5^DUF2775^Protein of unknown function (DUF2775)^187-234^E:5.8e-14","sigP:1^21^0.768^YES",".",".",".",".",".",".","."]
["TRINITY_DN46287_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-4.40484920496901,0,0,"TRINITY_DN46287_c2_g2_i5","PDR1_TOBAC^PDR1_TOBAC^Q:1767-346,H:961-1434^76.16%ID^E:0^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:1770-358,H:304-784^22.29%ID^E:6e-16^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46287_c2_g2_i5.p1","343-1779[-]","PDR1_TOBAC^PDR1_TOBAC^Q:5-478,H:961-1434^76.16%ID^E:0^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:4-474,H:304-784^22.8%ID^E:2e-24^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01061.21^ABC2_membrane^ABC-2 type transporter^206-420^E:3e-54",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN43370_c3_g12","leaves S. abrotanoides","roots S. abrotanoides",-4.46104812403823,{"v":8547722142.84981,"d":"8.55E+09"},"0.000137562312922513","TRINITY_DN43370_c3_g12_i1","ERF99_ARATH^ERF99_ARATH^Q:322-573,H:91-174^70.24%ID^E:6e-35^RecName: Full=Ethylene-responsive transcription factor 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43370_c3_g12_i1.p1","82-627[+]","ERF99_ARATH^ERF99_ARATH^Q:81-164,H:91-174^70.24%ID^E:1e-36^RecName: Full=Ethylene-responsive transcription factor 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^81-131^E:3.7e-14",".",".","ENOG41116MW^Transcription factor","KEGG:ath:AT2G44840","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006952^biological_process^defense response`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0010200^biological_process^response to chitin`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44355_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",-4.56480863313855,"0.000137135107899337","0.000217539720751219","TRINITY_DN44355_c1_g5_i1","QKY_ARATH^QKY_ARATH^Q:1167-208,H:761-1081^54.21%ID^E:4e-104^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44355_c1_g5_i1.p1","205-1077[-]","QKY_ARATH^QKY_ARATH^Q:1-290,H:791-1081^52.23%ID^E:1e-100^RecName: Full=Protein QUIRKY {ECO:0000303|PubMed:19180193};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08372.7^PRT_C^Plant phosphoribosyltransferase C-terminal^135-290^E:6.8e-73",".",".","ENOG410Y912^Plant phosphoribosyltransferase C-terminal","KEGG:ath:AT1G74720","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005509^molecular_function^calcium ion binding`GO:0005544^molecular_function^calcium-dependent phospholipid binding`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0048513^biological_process^animal organ development",".",".","."]
["TRINITY_DN7990_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.59026993946467,"0.000103189875737514","0.000165107418915528","TRINITY_DN7990_c0_g1_i2","UFC_ARATH^UFC_ARATH^Q:1168-896,H:44-134^50.55%ID^E:9e-23^RecName: Full=Protein UPSTREAM OF FLC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN7990_c0_g1_i2.p1","374-1243[-]","UFC_ARATH^UFC_ARATH^Q:26-116,H:44-134^50.55%ID^E:3e-24^RecName: Full=Protein UPSTREAM OF FLC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06136.10^DUF966^Domain of unknown function (DUF966)^30-200^E:8.6e-42",".",".","ENOG410YC81^function DUF966 domain containing protein, expressed","KEGG:ath:AT5G10150",".",".",".","."]
["TRINITY_DN232_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.76555393165597,"0.00012330292952505","0.000196263579803493","TRINITY_DN232_c0_g1_i1","ERF26_ARATH^ERF26_ARATH^Q:235-714,H:87-248^57.32%ID^E:2e-37^RecName: Full=Ethylene-responsive transcription factor ERF026;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN232_c0_g1_i1.p1","73-720[+]","ERF25_ARATH^ERF25_ARATH^Q:47-214,H:54-231^53.37%ID^E:2e-47^RecName: Full=Ethylene-responsive transcription factor ERF025;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^56-105^E:8.7e-10",".",".","ENOG410YMJJ^Transcription factor","KEGG:ath:AT5G52020","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0050832^biological_process^defense response to fungus`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44657_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.87136724691168,0,0,"TRINITY_DN44657_c2_g1_i11","FOX5_ARATH^FOX5_ARATH^Q:260-1753,H:27-525^46.92%ID^E:3e-147^RecName: Full=Flavin-dependent oxidoreductase FOX5 {ECO:0000303|PubMed:26352477};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44657_c2_g1_i11.p1","170-1759[+]","FOX5_ARATH^FOX5_ARATH^Q:31-528,H:27-525^46.92%ID^E:5e-155^RecName: Full=Flavin-dependent oxidoreductase FOX5 {ECO:0000303|PubMed:26352477};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01565.20^FAD_binding_4^FAD binding domain^78-214^E:4.3e-28`PF08031.9^BBE^Berberine and berberine like^469-526^E:3.9e-22","sigP:1^25^0.758^YES",".","COG0277^FAD linked oxidase domain protein","KEGG:ath:AT1G26420","GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47094_c2_g1","leaves S. abrotanoides","roots S. abrotanoides",-4.99471196046388,0,0,"TRINITY_DN47094_c2_g1_i6","GCS1_OCIBA^GCS1_OCIBA^Q:474-178,H:442-540^61.62%ID^E:3e-37^RecName: Full=Gamma-cadinene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum",".","TRINITY_DN47094_c2_g1_i6.p1","175-489[-]","GCS1_OCIBA^GCS1_OCIBA^Q:6-104,H:442-540^61.62%ID^E:1e-38^RecName: Full=Gamma-cadinene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum","PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^3-46^E:9.6e-09",".",".",".",".","GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity",".","."]
["TRINITY_DN47694_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-5.36822774838738,0,0,"TRINITY_DN47694_c2_g2_i10","TPSCM_MENPI^TPSCM_MENPI^Q:206-946,H:1-250^72.73%ID^E:5e-98^RecName: Full=Cis-muuroladiene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN47694_c2_g2_i10.p1","206-949[+]","TPSCM_MENPI^TPSCM_MENPI^Q:1-247,H:1-250^72.73%ID^E:7e-126^RecName: Full=Cis-muuroladiene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^26-193^E:8.2e-49",".",".",".","KEGG:ag:CAH10288`KO:K15809","GO:0005737^cellular_component^cytoplasm`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0006952^biological_process^defense response`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46148_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-5.57896315508928,"0.0312755457160762","0.040199881165195","TRINITY_DN46148_c3_g1_i23","ACT10_SOLTU^ACT10_SOLTU^Q:399-1,H:22-154^97.74%ID^E:7e-94^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46148_c3_g1_i23.p1","1-399[-]","ACT10_SOLTU^ACT10_SOLTU^Q:1-133,H:22-154^97.74%ID^E:6e-94^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00022.16^Actin^Actin^10-132^E:3.5e-51",".",".","COG5277^Actin-related protein",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN39347_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-5.618992605184,0,0,"TRINITY_DN39347_c0_g1_i3","CLDS_TOBAC^CLDS_TOBAC^Q:2331-973,H:98-552^55.46%ID^E:0^RecName: Full=Copal-8-ol diphosphate hydratase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`CLDS_TOBAC^CLDS_TOBAC^Q:907-194,H:551-802^42.41%ID^E:0^RecName: Full=Copal-8-ol diphosphate hydratase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN39347_c0_g1_i3.p1","961-2610[-]","KSA_ARATH^KSA_ARATH^Q:67-545,H:81-546^53.24%ID^E:0^RecName: Full=Ent-copalyl diphosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^136-151^E:5`PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^270-474^E:5.5e-48",".",".","ENOG410XNXR^diphosphate synthase","KEGG:ath:AT4G02780`KO:K04120","GO:0009507^cellular_component^chloroplast`GO:0009905^molecular_function^ent-copalyl diphosphate synthase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0009686^biological_process^gibberellin biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47478_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-5.71029159518758,"0.00313576476073667","0.00447711801675021","TRINITY_DN47478_c0_g2_i1","DR100_ARATH^DR100_ARATH^Q:2-673,H:143-365^42.41%ID^E:1e-41^RecName: Full=DNA-damage-repair/toleration protein DRT100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DR100_ARATH^DR100_ARATH^Q:377-613,H:123-201^40.51%ID^E:4e-09^RecName: Full=DNA-damage-repair/toleration protein DRT100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DR100_ARATH^DR100_ARATH^Q:329-610,H:131-224^34.04%ID^E:2e-08^RecName: Full=DNA-damage-repair/toleration protein DRT100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47478_c0_g2_i1.p1","2-709[+]","DR100_ARATH^DR100_ARATH^Q:1-224,H:143-365^42.41%ID^E:5e-47^RecName: Full=DNA-damage-repair/toleration protein DRT100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DR100_ARATH^DR100_ARATH^Q:98-204,H:95-201^33.64%ID^E:3e-10^RecName: Full=DNA-damage-repair/toleration protein DRT100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DR100_ARATH^DR100_ARATH^Q:110-203,H:131-224^34.04%ID^E:2e-08^RecName: Full=DNA-damage-repair/toleration protein DRT100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^18-39^E:0.61`PF00560.30^LRR_1^Leucine Rich Repeat^139-158^E:1.1`PF13855.3^LRR_8^Leucine rich repeat^161-198^E:1.4e-07`PF00560.30^LRR_1^Leucine Rich Repeat^164-184^E:0.016",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G12610","GO:0009507^cellular_component^chloroplast`GO:0000166^molecular_function^nucleotide binding`GO:0006281^biological_process^DNA repair","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN38921_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-5.78553158319852,0,0,"TRINITY_DN38921_c0_g1_i1","DIRL1_ARATH^DIRL1_ARATH^Q:145-372,H:29-102^40.79%ID^E:7e-08^RecName: Full=Putative lipid-transfer protein DIR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38921_c0_g1_i1.p1","37-378[+]","DIRL1_ARATH^DIRL1_ARATH^Q:37-104,H:29-94^44.12%ID^E:7e-14^RecName: Full=Putative lipid-transfer protein DIR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14368.3^LTP_2^Probable lipid transfer^17-112^E:4.3e-11","sigP:1^28^0.737^YES",".","ENOG410YXDY^Lipid-transfer protein","KEGG:ath:AT5G48485","GO:0048046^cellular_component^apoplast`GO:0005783^cellular_component^endoplasmic reticulum`GO:0009506^cellular_component^plasmodesma`GO:0005504^molecular_function^fatty acid binding`GO:0043621^molecular_function^protein self-association`GO:0008270^molecular_function^zinc ion binding`GO:0006869^biological_process^lipid transport`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway",".",".","."]
["TRINITY_DN45999_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-5.93815876608936,"0.00562076382180538","0.00783872552750174","TRINITY_DN45999_c3_g2_i6","R1B14_SOLDE^R1B14_SOLDE^Q:172-597,H:546-689^40.28%ID^E:7e-24^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45999_c3_g2_i6.p1","241-681[+]","R1B14_SOLDE^R1B14_SOLDE^Q:1-119,H:569-689^42.15%ID^E:3e-22^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-112^E:8.5e-29",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47312_c1_g2","leaves S. abrotanoides","roots S. abrotanoides",-6.11180110765908,0,0,"TRINITY_DN47312_c1_g2_i1","THCAS_CANSA^THCAS_CANSA^Q:1751-264,H:32-540^46.17%ID^E:8e-143^RecName: Full=Tetrahydrocannabinolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis",".","TRINITY_DN47312_c1_g2_i1.p1","255-1838[-]","THCAS_CANSA^THCAS_CANSA^Q:30-525,H:32-540^46.17%ID^E:2e-150^RecName: Full=Tetrahydrocannabinolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis","PF01565.20^FAD_binding_4^FAD binding domain^77-213^E:4.5e-31`PF08031.9^BBE^Berberine and berberine like^465-523^E:1.3e-22","sigP:1^20^0.809^YES",".",".",".","GO:0048046^cellular_component^apoplast`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46268_c3_g2","leaves S. abrotanoides","roots S. abrotanoides",-6.16855379653155,"0.00203039049948912","0.00294544305189186","TRINITY_DN46268_c3_g2_i15","ACT10_SOLTU^ACT10_SOLTU^Q:299-3,H:52-150^97.98%ID^E:3e-67^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46268_c3_g2_i15.p1","3-299[-]","ACT10_SOLTU^ACT10_SOLTU^Q:1-99,H:52-150^97.98%ID^E:3e-67^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00022.16^Actin^Actin^1-99^E:3.5e-43",".",".","COG5277^Actin-related protein",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN45764_c0_g2","leaves S. abrotanoides","roots S. abrotanoides",-6.18853601259267,0,0,"TRINITY_DN45764_c0_g2_i2","DTX16_ARATH^DTX16_ARATH^Q:2296-1427,H:20-309^59.66%ID^E:2e-106^RecName: Full=Protein DETOXIFICATION 16 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX16_ARATH^DTX16_ARATH^Q:1335-1093,H:311-391^49.38%ID^E:2e-106^RecName: Full=Protein DETOXIFICATION 16 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX16_ARATH^DTX16_ARATH^Q:800-678,H:390-430^65.85%ID^E:1e-09^RecName: Full=Protein DETOXIFICATION 16 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45764_c0_g2_i2.p1","1418-2380[-]","DTX16_ARATH^DTX16_ARATH^Q:29-318,H:20-309^59.66%ID^E:2e-112^RecName: Full=Protein DETOXIFICATION 16 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^45-205^E:6.4e-38`PF01554.15^MatE^MatE^266-319^E:8.1e-06",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT5G52450`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0009624^biological_process^response to nematode","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN103885_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-6.23275608935913,"0.000165853050321349","0.000261655474848735","TRINITY_DN103885_c0_g1_i1","P2C08_ORYSJ^P2C08_ORYSJ^Q:332-147,H:317-389^50.68%ID^E:1e-08^RecName: Full=Probable protein phosphatase 2C 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN103885_c0_g1_i1.p1","78-929[-]","P2C54_ARATH^P2C54_ARATH^Q:78-263,H:76-292^31.22%ID^E:3e-26^RecName: Full=Probable protein phosphatase 2C 54;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00481.18^PP2C^Protein phosphatase 2C^193-253^E:6.4e-10",".",".","COG0631^Phosphatase",".","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0004722^molecular_function^protein serine/threonine phosphatase activity`GO:1902040^biological_process^positive regulation of seed dormancy process","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN47390_c0_g5","leaves S. abrotanoides","roots S. abrotanoides",-6.26026983778669,"0.000347421282504397","0.000534582882603839","TRINITY_DN47390_c0_g5_i1","CPC_ARATH^CPC_ARATH^Q:228-4,H:6-76^53.33%ID^E:7e-16^RecName: Full=Transcription factor CPC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47390_c0_g5_i1.p1","1-516[-]","CPC_ARATH^CPC_ARATH^Q:97-171,H:6-76^53.33%ID^E:3e-16^RecName: Full=Transcription factor CPC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^131-172^E:3e-09",".",".","ENOG411043T^Myb-like DNA-binding domain","KEGG:ath:AT2G46410`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009913^biological_process^epidermal cell differentiation`GO:0007275^biological_process^multicellular organism development`GO:0010063^biological_process^positive regulation of trichoblast fate specification`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45808_c0_g5","leaves S. abrotanoides","roots S. abrotanoides",-6.36757863205544,0,0,"TRINITY_DN45808_c0_g5_i1","PER42_ARATH^PER42_ARATH^Q:203-1183,H:4-330^78.9%ID^E:0^RecName: Full=Peroxidase 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45808_c0_g5_i1.p1","188-1189[+]","PER42_ARATH^PER42_ARATH^Q:6-332,H:4-330^78.9%ID^E:0^RecName: Full=Peroxidase 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^50-293^E:5.3e-61","sigP:1^25^0.829^YES",".","ENOG4111GTW^peroxidase","KEGG:ath:AT4G21960`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0009505^cellular_component^plant-type cell wall`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0009664^biological_process^plant-type cell wall organization`GO:0006979^biological_process^response to oxidative stress`GO:0048511^biological_process^rhythmic process","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43817_c6_g7","leaves S. abrotanoides","roots S. abrotanoides",-6.40834520722899,{"v":8712551645.51806,"d":"8.71E+09"},"0.000140140860966413","TRINITY_DN43817_c6_g7_i1","ZHD11_ARATH^ZHD11_ARATH^Q:250-813,H:29-223^48.21%ID^E:6e-54^RecName: Full=Zinc-finger homeodomain protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43817_c6_g7_i1.p1","1-906[+]","ZHD11_ARATH^ZHD11_ARATH^Q:84-271,H:29-223^48.21%ID^E:2e-54^RecName: Full=Zinc-finger homeodomain protein 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04770.9^ZF-HD_dimer^ZF-HD protein dimerisation region^85-138^E:2.1e-25","sigP:1^22^0.528^YES",".","ENOG410YKTX^homeobox protein","KEGG:ath:AT1G69600","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44132_c1_g5","leaves S. abrotanoides","roots S. abrotanoides",-6.50173800051935,{"v":6322399224.83606,"d":"6.32E+09"},"0.000102660257337337","TRINITY_DN44132_c1_g5_i1","DTX54_ARATH^DTX54_ARATH^Q:707-3,H:6-240^74.89%ID^E:8e-91^RecName: Full=Protein DETOXIFICATION 54 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44132_c1_g5_i1.p1","3-716[-]","DTX54_ARATH^DTX54_ARATH^Q:4-238,H:6-238^75.32%ID^E:8e-115^RecName: Full=Protein DETOXIFICATION 54 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^32-192^E:4e-36",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G71870`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0006855^biological_process^drug transmembrane transport","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN48596_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-6.51813358931825,{"v":6324332015.50596,"d":"6.32E+09"},"0.000102685552078624","TRINITY_DN48596_c0_g1_i1","TAT2_ARATH^TAT2_ARATH^Q:1401-208,H:11-410^52.5%ID^E:1e-154^RecName: Full=Probable aminotransferase TAT2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN48596_c0_g1_i1.p1","199-1449[-]","TAT2_ARATH^TAT2_ARATH^Q:17-414,H:11-410^52.5%ID^E:3e-156^RecName: Full=Probable aminotransferase TAT2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00155.18^Aminotran_1_2^Aminotransferase class I and II^40-402^E:1e-52",".",".","COG0436^aminotransferase","KEGG:ath:AT5G53970`KO:K00815","GO:0004838^molecular_function^L-tyrosine:2-oxoglutarate aminotransferase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0006520^biological_process^cellular amino acid metabolic process`GO:0010189^biological_process^vitamin E biosynthetic process","GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0009058^biological_process^biosynthetic process",".","."]
["TRINITY_DN46250_c2_g2","leaves S. abrotanoides","roots S. abrotanoides",-6.65048440887554,"0.000327736056713319","0.000505315114920092","TRINITY_DN46250_c2_g2_i3","RPP8_ARATH^RPP8_ARATH^Q:237-1,H:1-79^31.65%ID^E:7e-07^RecName: Full=Disease resistance protein RPP8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46250_c2_g2_i3.p1","1-312[-]","RPP8_ARATH^RPP8_ARATH^Q:26-104,H:1-79^31.65%ID^E:2e-06^RecName: Full=Disease resistance protein RPP8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT5G43470","GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0000166^molecular_function^nucleotide binding`GO:0071446^biological_process^cellular response to salicylic acid stimulus`GO:0006952^biological_process^defense response`GO:0051607^biological_process^defense response to virus`GO:0009626^biological_process^plant-type hypersensitive response`GO:0002230^biological_process^positive regulation of defense response to virus by host`GO:0009416^biological_process^response to light stimulus`GO:0002239^biological_process^response to oomycetes`GO:0051707^biological_process^response to other organism`GO:0009751^biological_process^response to salicylic acid`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN32928_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-6.8001361258522,0,0,"TRINITY_DN32928_c0_g1_i1","GASAE_ARATH^GASAE_ARATH^Q:509-321,H:213-275^68.25%ID^E:7e-23^RecName: Full=Gibberellin-regulated protein 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32928_c0_g1_i1.p1","318-749[-]","GASAE_ARATH^GASAE_ARATH^Q:81-143,H:213-275^68.25%ID^E:6e-25^RecName: Full=Gibberellin-regulated protein 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02704.11^GASA^Gibberellin regulated protein^83-143^E:3.8e-21","sigP:1^21^0.906^YES",".","ENOG410YXYH^Gibberellin regulated protein",".","GO:0005576^cellular_component^extracellular region`GO:0005886^cellular_component^plasma membrane`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:2000377^biological_process^regulation of reactive oxygen species metabolic process`GO:0009737^biological_process^response to abscisic acid`GO:0009739^biological_process^response to gibberellin`GO:0009651^biological_process^response to salt stress",".",".","."]
["TRINITY_DN47728_c5_g1","leaves S. abrotanoides","roots S. abrotanoides",-6.87147123462421,"0.000238882260868879","0.000372469704439842","TRINITY_DN47728_c5_g1_i26","ACT10_SOLTU^ACT10_SOLTU^Q:349-2,H:42-157^98.28%ID^E:1e-80^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47728_c5_g1_i26.p1","2-349[-]","ACT10_SOLTU^ACT10_SOLTU^Q:1-116,H:42-157^98.28%ID^E:9e-81^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00022.16^Actin^Actin^2-116^E:5.3e-49",".",".","COG5277^Actin-related protein",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN45198_c5_g3","leaves S. abrotanoides","roots S. abrotanoides",-6.98021196277183,0,0,"TRINITY_DN45198_c5_g3_i1","PRU1_PRUAR^PRU1_PRUAR^Q:1161-1643,H:1-160^47.2%ID^E:2e-39^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN45198_c5_g3_i1.p2","1161-1646[+]","PRU1_PRUAR^PRU1_PRUAR^Q:1-161,H:1-160^47.2%ID^E:4e-43^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^14-149^E:2.3e-22",".",".",".",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN45249_c3_g3","leaves S. abrotanoides","roots S. abrotanoides",-7.23711187575268,0,0,"TRINITY_DN45249_c3_g3_i1","DIR1_ARATH^DIR1_ARATH^Q:713-300,H:35-171^44.2%ID^E:1e-30^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45249_c3_g3_i1.p1","243-920[-]","DIR1_ARATH^DIR1_ARATH^Q:70-220,H:35-179^42.38%ID^E:2e-32^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^76-220^E:7.4e-41",".",".","ENOG410YIMF^Dirigent-like protein","KEGG:ath:AT5G42510","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN45603_c2_g5","leaves S. abrotanoides","roots S. abrotanoides",-7.6606369232494,0,0,"TRINITY_DN45603_c2_g5_i3","C71DA_SOYBN^C71DA_SOYBN^Q:530-1138,H:308-510^57.14%ID^E:6e-85^RecName: Full=Cytochrome P450 71D10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN45603_c2_g5_i3.p1","533-1150[+]","C71DA_SOYBN^C71DA_SOYBN^Q:1-202,H:309-510^57.43%ID^E:6e-89^RecName: Full=Cytochrome P450 71D10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00067.19^p450^Cytochrome P450^1-184^E:1.9e-61",".",".","COG2124^Cytochrome p450","KEGG:gmx:606548","GO:0016020^cellular_component^membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0044550^biological_process^secondary metabolite biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45249_c3_g7","leaves S. abrotanoides","roots S. abrotanoides",-8.00417826042079,0,0,"TRINITY_DN45249_c3_g7_i1","DIR1_ARATH^DIR1_ARATH^Q:692-252,H:37-178^40.82%ID^E:9e-27^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45249_c3_g7_i1.p1","216-827[-]","DIR1_ARATH^DIR1_ARATH^Q:46-192,H:37-178^40.82%ID^E:5e-28^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^50-180^E:2.4e-35","sigP:1^26^0.633^YES",".","ENOG410YIMF^Dirigent-like protein","KEGG:ath:AT5G42510","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN45249_c3_g1","leaves S. abrotanoides","roots S. abrotanoides",-8.22925265616472,0,0,"TRINITY_DN45249_c3_g1_i1","DIR1_ARATH^DIR1_ARATH^Q:1020-574,H:36-179^40.94%ID^E:6e-30^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45249_c3_g1_i1.p1","538-1131[-]","DIR1_ARATH^DIR1_ARATH^Q:38-186,H:36-179^40.94%ID^E:1e-31^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^43-186^E:4.9e-36","sigP:1^26^0.702^YES",".","ENOG410YIMF^Dirigent-like protein","KEGG:ath:AT5G42510","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN3407_c0_g1","leaves S. abrotanoides","roots S. abrotanoides",-8.23549457977757,0,0,"TRINITY_DN3407_c0_g1_i1","NLTP8_ARATH^NLTP8_ARATH^Q:720-451,H:24-113^58.89%ID^E:1e-15^RecName: Full=Non-specific lipid-transfer protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN3407_c0_g1_i1.p1","445-792[-]","NLTP8_ARATH^NLTP8_ARATH^Q:24-114,H:23-113^58.24%ID^E:5e-32^RecName: Full=Non-specific lipid-transfer protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14368.3^LTP_2^Probable lipid transfer^11-104^E:1.5e-06`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^29-112^E:2.7e-07","sigP:1^26^0.802^YES",".","ENOG41118KK^Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity)","KEGG:ath:AT2G18370","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN47486_c5_g11","leaves S. abrotanoides","roots S. abrotanoides",-12.1169822634046,0,0,"TRINITY_DN47486_c5_g11_i1","PPO1_IPOBA^PPO1_IPOBA^Q:3-800,H:122-387^50%ID^E:2e-81^RecName: Full=Polyphenol oxidase I, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN47486_c5_g11_i1.p1","3-839[+]","PPO1_IPOBA^PPO1_IPOBA^Q:1-266,H:122-387^50%ID^E:2e-81^RecName: Full=Polyphenol oxidase I, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF00264.17^Tyrosinase^Common central domain of tyrosinase^1-165^E:7.6e-22`PF12142.5^PPO1_DWL^Polyphenol oxidase middle domain^174-223^E:1.3e-17",".",".",".",".","GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0004097^molecular_function^catechol oxidase activity`GO:0046872^molecular_function^metal ion binding","GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process`GO:0004097^molecular_function^catechol oxidase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]

{"sheet":"(C) leaves SY_roots SY_DEGs","index":2,"n_rows":925,"n_cols":21,"rows_kept":925}
["Table S3 (C). Differently expressed genes in the comparison between leaves and roots of S. yangii"]
[]
["Row.names","sampleA","sampleB","log2FoldChange","pvalue","padj","transcript_id","sprot_Top_BLASTX_hit","RNAMMER","prot_id","prot_coords","sprot_Top_BLASTP_hit","Pfam","SignalP","TmHMM","eggnog","Kegg","gene_ontology_blast","gene_ontology_pfam","transcript","peptide"]
["TRINITY_DN47404_c4_g1","leaves S. yangii","roots S. yangii",12.2456210916964,0,0,"TRINITY_DN47404_c4_g1_i2","PSAEA_NICSY^PSAEA_NICSY^Q:659-237,H:1-140^65.28%ID^E:3e-39^RecName: Full=Photosystem I reaction center subunit IV A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47404_c4_g1_i2.p1","231-659[-]","PSAEA_NICSY^PSAEA_NICSY^Q:1-141,H:1-140^69.44%ID^E:3e-50^RecName: Full=Photosystem I reaction center subunit IV A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF02427.14^PSI_PsaE^Photosystem I reaction centre subunit IV / PsaE^83-140^E:2.4e-30",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN47651_c0_g1","leaves S. yangii","roots S. yangii",11.9884348292596,0,0,"TRINITY_DN47651_c0_g1_i2","PSAH_SPIOL^PSAH_SPIOL^Q:619-191,H:1-144^81.25%ID^E:8e-67^RecName: Full=Photosystem I reaction center subunit VI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN47651_c0_g1_i2.p1","188-619[-]","PSAH_SPIOL^PSAH_SPIOL^Q:1-143,H:1-144^81.25%ID^E:1e-79^RecName: Full=Photosystem I reaction center subunit VI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF03244.11^PSI_PsaH^Photosystem I reaction centre subunit VI^6-143^E:1.7e-70",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN43490_c2_g1","leaves S. yangii","roots S. yangii",11.5424946682738,0,0,"TRINITY_DN43490_c2_g1_i1","PSBY_ARATH^PSBY_ARATH^Q:540-217,H:80-187^67.59%ID^E:5e-19^RecName: Full=Photosystem II core complex proteins psbY, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43490_c2_g1_i1.p1","211-774[-]","PSBY_SPIOL^PSBY_SPIOL^Q:11-187,H:11-199^56.41%ID^E:2e-57^RecName: Full=Photosystem II core complex proteins psbY, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF06298.8^PsbY^Photosystem II protein Y (PsbY)^80-112^E:1.7e-14`PF06298.8^PsbY^Photosystem II protein Y (PsbY)^152-184^E:6.4e-11",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0030145^molecular_function^manganese ion binding`GO:0015979^biological_process^photosynthesis","GO:0030145^molecular_function^manganese ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN91123_c0_g1","leaves S. yangii","roots S. yangii",11.2047613191286,0,0,"TRINITY_DN91123_c0_g1_i1","PST2_PETHY^PST2_PETHY^Q:240-515,H:10-105^57.29%ID^E:5e-13^RecName: Full=Photosystem II 5 kDa protein, chloroplastic {ECO:0000303|PubMed:22700981};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN91123_c0_g1_i1.p1","213-521[+]","PST2_PETHY^PST2_PETHY^Q:1-101,H:1-105^56.19%ID^E:3e-26^RecName: Full=Photosystem II 5 kDa protein, chloroplastic {ECO:0000303|PubMed:22700981};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009523^cellular_component^photosystem II`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN43966_c2_g1","leaves S. yangii","roots S. yangii",10.5402232580747,0,0,"TRINITY_DN43966_c2_g1_i2","PSAEA_NICSY^PSAEA_NICSY^Q:598-188,H:1-140^65.96%ID^E:7e-31^RecName: Full=Photosystem I reaction center subunit IV A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43966_c2_g1_i2.p1","182-598[-]","PSAEA_NICSY^PSAEA_NICSY^Q:1-137,H:1-140^66.9%ID^E:3e-48^RecName: Full=Photosystem I reaction center subunit IV A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF02427.14^PSI_PsaE^Photosystem I reaction centre subunit IV / PsaE^79-136^E:2.9e-29",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN44683_c1_g2","leaves S. yangii","roots S. yangii",10.3625616609718,0,0,"TRINITY_DN44683_c1_g2_i8","G3PB_PEA^G3PB_PEA^Q:578-1831,H:34-451^88.52%ID^E:0^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44683_c1_g2_i8.p1","881-1834[+]","G3PB_ARATH^G3PB_ARATH^Q:1-317,H:131-447^91.17%ID^E:0^RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00044.21^Gp_dh_N^Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain^2-105^E:5.1e-33`PF02800.17^Gp_dh_C^Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain^110-267^E:9.2e-65",".",".","COG0057^glyceraldehyde3phosphate dehydrogenase","KEGG:ath:AT1G42970`KO:K05298","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0031969^cellular_component^chloroplast membrane`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016020^cellular_component^membrane`GO:0010319^cellular_component^stromule`GO:0004365^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity`GO:0047100^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity`GO:0051287^molecular_function^NAD binding`GO:0050661^molecular_function^NADP binding`GO:0006006^biological_process^glucose metabolic process`GO:0019253^biological_process^reductive pentose-phosphate cycle`GO:0046686^biological_process^response to cadmium ion`GO:0009409^biological_process^response to cold`GO:0009416^biological_process^response to light stimulus`GO:0009744^biological_process^response to sucrose","GO:0016620^molecular_function^oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46113_c2_g1","leaves S. yangii","roots S. yangii",10.3044823508022,0,0,"TRINITY_DN46113_c2_g1_i2","CCD4_ARATH^CCD4_ARATH^Q:1910-369,H:80-595^72.78%ID^E:0^RecName: Full=Probable carotenoid cleavage dioxygenase 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46113_c2_g1_i2.p1","366-2159[-]","CCD4_ARATH^CCD4_ARATH^Q:84-597,H:80-595^72.78%ID^E:0^RecName: Full=Probable carotenoid cleavage dioxygenase 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03055.12^RPE65^Retinal pigment epithelial membrane protein^121-589^E:4.1e-95",".",".","COG3670^dioxygenase","KEGG:ath:AT4G19170`KO:K09840","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0051213^molecular_function^dioxygenase activity`GO:0046872^molecular_function^metal ion binding","GO:0016702^molecular_function^oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44264_c1_g3","leaves S. yangii","roots S. yangii",10.2697123027678,0,0,"TRINITY_DN44264_c1_g3_i1","CB13_SOLLC^CB13_SOLLC^Q:1638-817,H:1-273^90.88%ID^E:4e-156^RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44264_c1_g3_i1.p1","814-1638[-]","CB13_SOLLC^CB13_SOLLC^Q:1-274,H:1-273^90.88%ID^E:6e-174^RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^65-244^E:2.6e-50",".",".","ENOG410ZM8E^Chlorophyll a-b binding protein",".","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0010287^cellular_component^plastoglobule`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0031409^molecular_function^pigment binding`GO:0009768^biological_process^photosynthesis, light harvesting in photosystem I`GO:0018298^biological_process^protein-chromophore linkage`GO:0009416^biological_process^response to light stimulus",".",".","."]
["TRINITY_DN42771_c0_g1","leaves S. yangii","roots S. yangii",9.97435880193392,0,0,"TRINITY_DN42771_c0_g1_i2","CAHC_TOBAC^CAHC_TOBAC^Q:1458-595,H:2-267^58.9%ID^E:6e-107^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`CAHC_TOBAC^CAHC_TOBAC^Q:538-353,H:249-313^60%ID^E:6e-16^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN42771_c0_g1_i2.p1","754-1470[-]","CAHC_TOBAC^CAHC_TOBAC^Q:7-235,H:4-232^63.52%ID^E:3e-96^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00484.16^Pro_CA^Carbonic anhydrase^150-226^E:6.4e-28",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015976^biological_process^carbon utilization","GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN44362_c5_g2","leaves S. yangii","roots S. yangii",9.94919773026474,0,0,"TRINITY_DN44362_c5_g2_i12","FRO6_ARATH^FRO6_ARATH^Q:2443-3000,H:168-353^69.89%ID^E:4e-77^RecName: Full=Ferric reduction oxidase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FRO6_ARATH^FRO6_ARATH^Q:268-681,H:25-161^45.71%ID^E:3e-28^RecName: Full=Ferric reduction oxidase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44362_c5_g2_i12.p2","2449-3018[+]","FRO7_ARATH^FRO7_ARATH^Q:1-184,H:179-362^71.2%ID^E:2e-85^RecName: Full=Ferric reduction oxidase 7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01794.16^Ferric_reduct^Ferric reductase like transmembrane component^10-130^E:1.4e-19",".",".","ENOG410XNZY^NADPH Oxidase","KEGG:ath:AT5G49740","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0000293^molecular_function^ferric-chelate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0006811^biological_process^ion transport`GO:0009767^biological_process^photosynthetic electron transport chain",".",".","."]
["TRINITY_DN46336_c4_g2","leaves S. yangii","roots S. yangii",9.86078244835577,0,0,"TRINITY_DN46336_c4_g2_i5","FENR_SPIOL^FENR_SPIOL^Q:1017-1,H:1-345^82.66%ID^E:0^RecName: Full=Ferredoxin--NADP reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN46336_c4_g2_i5.p1","1-1017[-]","FENR1_PEA^FENR1_PEA^Q:1-339,H:1-336^84.37%ID^E:0^RecName: Full=Ferredoxin--NADP reductase, leaf isozyme, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00970.21^FAD_binding_6^Oxidoreductase FAD-binding domain^138-202^E:0.00017`PF00175.18^NAD_binding_1^Oxidoreductase NAD-binding domain^216-331^E:1.1e-29",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0004324^molecular_function^ferredoxin-NADP+ reductase activity`GO:0015979^biological_process^photosynthesis","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44114_c2_g2","leaves S. yangii","roots S. yangii",9.67998011040975,0,0,"TRINITY_DN44114_c2_g2_i6","PGP1B_ARATH^PGP1B_ARATH^Q:1241-273,H:36-362^83.49%ID^E:1e-174^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44114_c2_g2_i6.p1","270-1391[-]","PGP1B_ARATH^PGP1B_ARATH^Q:51-373,H:36-362^83.49%ID^E:0^RecName: Full=Phosphoglycolate phosphatase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00702.23^Hydrolase^haloacid dehalogenase-like hydrolase^90-329^E:1.2e-11`PF13344.3^Hydrolase_6^Haloacid dehalogenase-like hydrolase^93-195^E:1.1e-34`PF13242.3^Hydrolase_like^HAD-hyrolase-like^290-363^E:7.9e-19",".",".","COG0647^Hydrolase","KEGG:ath:AT5G36700`KEGG:ath:AT5G36790`KO:K19269","GO:0009507^cellular_component^chloroplast`GO:0008967^molecular_function^phosphoglycolate phosphatase activity`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN46848_c0_g1","leaves S. yangii","roots S. yangii",9.6010966306089,0,0,"TRINITY_DN46848_c0_g1_i22","CB22_TOBAC^CB22_TOBAC^Q:863-108,H:15-265^92.46%ID^E:3e-168^RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46848_c0_g1_i22.p1","105-905[-]","CB24_TOBAC^CB24_TOBAC^Q:1-266,H:1-267^91.39%ID^E:6e-179^RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^66-232^E:3.1e-50",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0009765^biological_process^photosynthesis, light harvesting`GO:0018298^biological_process^protein-chromophore linkage",".",".","."]
["TRINITY_DN46835_c1_g2","leaves S. yangii","roots S. yangii",9.57031728397326,0,0,"TRINITY_DN46835_c1_g2_i7","GLYM_SOLTU^GLYM_SOLTU^Q:2067-511,H:1-518^89.67%ID^E:0^RecName: Full=Serine hydroxymethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46835_c1_g2_i7.p1","508-2265[-]","GLYM_SOLTU^GLYM_SOLTU^Q:67-585,H:1-518^89.67%ID^E:0^RecName: Full=Serine hydroxymethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00464.16^SHMT^Serine hydroxymethyltransferase^125-521^E:1.9e-211",".",".","COG0112^Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity)","KEGG:sot:102591486`KO:K00600","GO:0048046^cellular_component^apoplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0022626^cellular_component^cytosolic ribosome`GO:0005759^cellular_component^mitochondrial matrix`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0010319^cellular_component^stromule`GO:0004372^molecular_function^glycine hydroxymethyltransferase activity`GO:0008266^molecular_function^poly(U) RNA binding`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0042742^biological_process^defense response to bacterium`GO:0009814^biological_process^defense response, incompatible interaction`GO:0006544^biological_process^glycine metabolic process`GO:0006563^biological_process^L-serine metabolic process`GO:0009853^biological_process^photorespiration`GO:0019684^biological_process^photosynthesis, light reaction`GO:0009626^biological_process^plant-type hypersensitive response`GO:0009697^biological_process^salicylic acid biosynthetic process`GO:0035999^biological_process^tetrahydrofolate interconversion","GO:0016740^molecular_function^transferase activity",".","."]
["TRINITY_DN45393_c0_g2","leaves S. yangii","roots S. yangii",9.53136614809522,0,0,"TRINITY_DN45393_c0_g2_i2","PSAN_ARATH^PSAN_ARATH^Q:1544-1329,H:100-171^94.44%ID^E:9e-49^RecName: Full=Photosystem I reaction center subunit N, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PSAN_ARATH^PSAN_ARATH^Q:1881-1624,H:1-100^43%ID^E:9e-49^RecName: Full=Photosystem I reaction center subunit N, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45393_c0_g2_i2.p3","1576-1881[-]","PSAN_ARATH^PSAN_ARATH^Q:1-86,H:1-100^45%ID^E:3e-15^RecName: Full=Photosystem I reaction center subunit N, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05479.8^PsaN^Photosystem I reaction centre subunit N (PSAN or PSI-N)^43-86^E:8.7e-11",".",".","ENOG411281Y^Photosystem I reaction center subunit",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009522^cellular_component^photosystem I`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I",".","."]
["TRINITY_DN46788_c0_g2","leaves S. yangii","roots S. yangii",8.97319640167542,0,0,"TRINITY_DN46788_c0_g2_i2","CAX3_ARATH^CAX3_ARATH^Q:205-1530,H:1-458^70.31%ID^E:3e-170^RecName: Full=Vacuolar cation/proton exchanger 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46788_c0_g2_i2.p1","184-1557[+]","CAX1_ARATH^CAX1_ARATH^Q:20-435,H:13-436^71.93%ID^E:0^RecName: Full=Vacuolar cation/proton exchanger 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^99-256^E:1e-23`PF01699.21^Na_Ca_ex^Sodium/calcium exchanger protein^287-430^E:1.2e-17",".",".","COG0387^Calcium Proton","KEGG:ath:AT2G38170`KO:K07300","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0015369^molecular_function^calcium:proton antiporter activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0030026^biological_process^cellular manganese ion homeostasis`GO:0006882^biological_process^cellular zinc ion homeostasis`GO:0009631^biological_process^cold acclimation`GO:0055062^biological_process^phosphate ion homeostasis`GO:0009651^biological_process^response to salt stress","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47208_c0_g1","leaves S. yangii","roots S. yangii",8.96344658057526,0,0,"TRINITY_DN47208_c0_g1_i3","PSBO_SOLTU^PSBO_SOLTU^Q:1160-192,H:3-333^86.71%ID^E:0^RecName: Full=Oxygen-evolving enhancer protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47208_c0_g1_i3.p1","189-1169[-]","PSBO_SOLTU^PSBO_SOLTU^Q:4-326,H:3-333^86.71%ID^E:0^RecName: Full=Oxygen-evolving enhancer protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01716.15^MSP^Manganese-stabilising protein / photosystem II polypeptide^92-324^E:4.5e-99",".",".","ENOG410XP4G^photosystem II manganese-stabilizing",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0019898^cellular_component^extrinsic component of membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0042549^biological_process^photosystem II stabilization","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0042549^biological_process^photosystem II stabilization`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN44092_c2_g3","leaves S. yangii","roots S. yangii",8.92237947817155,0,0,"TRINITY_DN44092_c2_g3_i6","THIC_ARATH^THIC_ARATH^Q:2178-259,H:3-641^85.54%ID^E:0^RecName: Full=Phosphomethylpyrimidine synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44092_c2_g3_i6.p1","247-2181[-]","THIC_ARATH^THIC_ARATH^Q:2-641,H:3-641^85.54%ID^E:0^RecName: Full=Phosphomethylpyrimidine synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01964.15^ThiC_Rad_SAM^Radical SAM ThiC family^164-584^E:6.3e-197",".",".","COG0422^thiamine diphosphate biosynthetic process","KEGG:ath:AT2G29630`KO:K03147","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0080041^molecular_function^ADP-ribose pyrophosphohydrolase activity`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0016829^molecular_function^lyase activity`GO:0046872^molecular_function^metal ion binding`GO:0010266^biological_process^response to vitamin B1`GO:0009228^biological_process^thiamine biosynthetic process`GO:0009229^biological_process^thiamine diphosphate biosynthetic process","GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0009228^biological_process^thiamine biosynthetic process",".","."]
["TRINITY_DN47370_c2_g2","leaves S. yangii","roots S. yangii",8.71810552801369,0,0,"TRINITY_DN47370_c2_g2_i3","UCRIA_ARATH^UCRIA_ARATH^Q:1524-1796,H:105-195^93.41%ID^E:3e-52^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47370_c2_g2_i3.p1","1398-1856[+]","UCRIA_ARATH^UCRIA_ARATH^Q:43-133,H:105-195^93.41%ID^E:3e-59^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00355.23^Rieske^Rieske [2Fe-2S] domain^73-132^E:2.1e-12",".",".","COG0723^Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)","KEGG:ath:AT4G03280`KO:K02636","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009512^cellular_component^cytochrome b6f complex`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009579^cellular_component^thylakoid`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0046028^molecular_function^electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity`GO:0045158^molecular_function^electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity`GO:0046872^molecular_function^metal ion binding`GO:0009496^molecular_function^plastoquinol--plastocyanin reductase activity`GO:0008121^molecular_function^ubiquinol-cytochrome-c reductase activity`GO:0042742^biological_process^defense response to bacterium`GO:0010196^biological_process^nonphotochemical quenching`GO:0009767^biological_process^photosynthetic electron transport chain`GO:0080167^biological_process^response to karrikin","GO:0016491^molecular_function^oxidoreductase activity`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47370_c2_g1","leaves S. yangii","roots S. yangii",8.71510447355937,0,0,"TRINITY_DN47370_c2_g1_i15","UCRIA_ARATH^UCRIA_ARATH^Q:1562-1290,H:105-195^93.41%ID^E:2e-53^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47370_c2_g1_i15.p1","1230-1658[-]","UCRIA_ARATH^UCRIA_ARATH^Q:33-123,H:105-195^93.41%ID^E:3e-59^RecName: Full=Cytochrome b6-f complex iron-sulfur subunit, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00355.23^Rieske^Rieske [2Fe-2S] domain^63-122^E:1.7e-12","sigP:1^20^0.617^YES",".","COG0723^Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (By similarity)","KEGG:ath:AT4G03280`KO:K02636","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009512^cellular_component^cytochrome b6f complex`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009579^cellular_component^thylakoid`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0046028^molecular_function^electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity`GO:0045158^molecular_function^electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity`GO:0046872^molecular_function^metal ion binding`GO:0009496^molecular_function^plastoquinol--plastocyanin reductase activity`GO:0008121^molecular_function^ubiquinol-cytochrome-c reductase activity`GO:0042742^biological_process^defense response to bacterium`GO:0010196^biological_process^nonphotochemical quenching`GO:0009767^biological_process^photosynthetic electron transport chain`GO:0080167^biological_process^response to karrikin","GO:0016491^molecular_function^oxidoreductase activity`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46270_c2_g3","leaves S. yangii","roots S. yangii",8.57228520132166,0,0,"TRINITY_DN46270_c2_g3_i3","F16P1_ORYSJ^F16P1_ORYSJ^Q:254-1318,H:47-406^85.83%ID^E:0^RecName: Full=Fructose-1,6-bisphosphatase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46270_c2_g3_i3.p1","92-1321[+]","F16P1_PEA^F16P1_PEA^Q:6-409,H:2-407^80.2%ID^E:0^RecName: Full=Fructose-1,6-bisphosphatase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00316.17^FBPase^Fructose-1-6-bisphosphatase, N-terminal domain^75-275^E:9e-57",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0046872^molecular_function^metal ion binding`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0042578^molecular_function^phosphoric ester hydrolase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN43339_c0_g2","leaves S. yangii","roots S. yangii",8.5360499128049,0,0,"TRINITY_DN43339_c0_g2_i5","Y1669_ARATH^Y1669_ARATH^Q:713-3,H:1-211^59.84%ID^E:2e-88^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43339_c0_g2_i5.p1","162-707[-]","Y1669_ARATH^Y1669_ARATH^Q:21-180,H:30-188^74.38%ID^E:4e-80^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00248.18^Aldo_ket_red^Aldo/keto reductase family^52-173^E:8.2e-21",".",".","COG0667^Aldo keto reductase","KEGG:ath:AT1G06690","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010287^cellular_component^plastoglobule`GO:0016491^molecular_function^oxidoreductase activity",".",".","."]
["TRINITY_DN46280_c4_g4","leaves S. yangii","roots S. yangii",8.46750870255318,0,0,"TRINITY_DN46280_c4_g4_i1","PSAL_SPIOL^PSAL_SPIOL^Q:129-755,H:11-216^83.25%ID^E:3e-97^RecName: Full=Photosystem I reaction center subunit XI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN46280_c4_g4_i1.p1","99-758[+]","PSAL_SPIOL^PSAL_SPIOL^Q:1-219,H:1-216^82.65%ID^E:1e-108^RecName: Full=Photosystem I reaction center subunit XI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF02605.12^PsaL^Photosystem I reaction centre subunit XI^61-213^E:1.2e-58",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN43758_c2_g1","leaves S. yangii","roots S. yangii",8.41153590924557,0,0,"TRINITY_DN43758_c2_g1_i3","GPPL2_ARATH^GPPL2_ARATH^Q:667-1458,H:57-319^83.71%ID^E:8e-151^RecName: Full=Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43758_c2_g1_i3.p1","514-1461[+]","GPPL2_ARATH^GPPL2_ARATH^Q:52-315,H:57-319^83.71%ID^E:5e-155^RecName: Full=Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00702.23^Hydrolase^haloacid dehalogenase-like hydrolase^73-266^E:1.2e-16`PF13419.3^HAD_2^Haloacid dehalogenase-like hydrolase^75-271^E:4.3e-18`PF13242.3^Hydrolase_like^HAD-hyrolase-like^228-292^E:1.4e-09",".",".","COG0637^HAD-superfamily hydrolase subfamily IA variant 3","KEGG:ath:AT3G48420","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016787^molecular_function^hydrolase activity`GO:0046872^molecular_function^metal ion binding",".",".","."]
["TRINITY_DN45660_c3_g1","leaves S. yangii","roots S. yangii",8.28859869004082,0,0,"TRINITY_DN45660_c3_g1_i2","PSAD_NICSY^PSAD_NICSY^Q:933-301,H:1-204^81.69%ID^E:3e-104^RecName: Full=Photosystem I reaction center subunit II, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45660_c3_g1_i2.p1","298-933[-]","PSAD_SOLLC^PSAD_SOLLC^Q:1-211,H:1-208^81.78%ID^E:1e-111^RecName: Full=Photosystem I reaction center subunit II, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF02531.13^PsaD^PsaD^79-209^E:1.6e-68",".",".","ENOG4111HAV^photosystem i","KEGG:sly:543978`KO:K02692","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN45675_c5_g3","leaves S. yangii","roots S. yangii",8.21774884303151,0,0,"TRINITY_DN45675_c5_g3_i3","HF101_ORYSJ^HF101_ORYSJ^Q:793-314,H:363-522^86.88%ID^E:1e-91^RecName: Full=Fe-S cluster assembly factor HCF101, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`HF101_ORYSJ^HF101_ORYSJ^Q:1325-1227,H:301-333^96.97%ID^E:6e-19^RecName: Full=Fe-S cluster assembly factor HCF101, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`HF101_ORYSJ^HF101_ORYSJ^Q:1507-1436,H:279-302^95.83%ID^E:6e-19^RecName: Full=Fe-S cluster assembly factor HCF101, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`HF101_ORYSJ^HF101_ORYSJ^Q:1956-1792,H:224-278^76.36%ID^E:1e-18^RecName: Full=Fe-S cluster assembly factor HCF101, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45675_c5_g3_i3.p1","299-862[-]","HF101_ORYSJ^HF101_ORYSJ^Q:24-183,H:363-522^86.88%ID^E:2e-98^RecName: Full=Fe-S cluster assembly factor HCF101, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF06155.9^DUF971^Protein of unknown function (DUF971)^92-173^E:4e-12",".",".","COG0489^ATP-binding protein","KEGG:osa:4324700","GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0046872^molecular_function^metal ion binding",".",".","."]
["TRINITY_DN41229_c0_g1","leaves S. yangii","roots S. yangii",8.14824219099218,0,0,"TRINITY_DN41229_c0_g1_i2","PRXQ_POPJC^PRXQ_POPJC^Q:969-538,H:1-143^73.61%ID^E:4e-58^RecName: Full=Peroxiredoxin Q, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus",".","TRINITY_DN41229_c0_g1_i2.p1","517-969[-]","PRXQ_POPJC^PRXQ_POPJC^Q:1-144,H:1-143^73.61%ID^E:5e-61^RecName: Full=Peroxiredoxin Q, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus","PF08534.7^Redoxin^Redoxin^69-137^E:1.6e-16`PF00578.18^AhpC-TSA^AhpC/TSA family^70-142^E:1.3e-26",".",".",".",".","GO:0009534^cellular_component^chloroplast thylakoid`GO:0004601^molecular_function^peroxidase activity`GO:0051920^molecular_function^peroxiredoxin activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0016209^molecular_function^antioxidant activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44092_c2_g4","leaves S. yangii","roots S. yangii",8.13472590805929,0,0,"TRINITY_DN44092_c2_g4_i2","PLGG1_ARATH^PLGG1_ARATH^Q:176-1591,H:32-512^72.97%ID^E:0^RecName: Full=Plastidal glycolate/glycerate translocator 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44092_c2_g4_i2.p1","2-1594[+]","PLGG1_ARATH^PLGG1_ARATH^Q:14-530,H:3-512^69.01%ID^E:0^RecName: Full=Plastidal glycolate/glycerate translocator 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04172.13^LrgB^LrgB-like family^294-517^E:1.8e-40",".",".","COG1346^cytolysis","KEGG:ath:AT1G32080","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:1901974^molecular_function^glycerate transmembrane transporter activity`GO:0043879^molecular_function^glycolate transmembrane transporter activity`GO:0009658^biological_process^chloroplast organization`GO:1901975^biological_process^glycerate transmembrane transport`GO:0097339^biological_process^glycolate transmembrane transport`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN41297_c0_g1","leaves S. yangii","roots S. yangii",8.1194123398537,0,0,"TRINITY_DN41297_c0_g1_i5","CB11_SOLLC^CB11_SOLLC^Q:291-1091,H:1-240^76.58%ID^E:4e-139^RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN41297_c0_g1_i5.p1","291-884[+]","CB11_SOLLC^CB11_SOLLC^Q:1-196,H:1-196^83.84%ID^E:1e-116^RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00504.18^Chloroa_b-bind^Chlorophyll A-B binding protein^56-196^E:6.1e-38",".",".","ENOG410XVD6^Chlorophyll A-B binding protein","KEGG:sly:544310`KO:K08907","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009522^cellular_component^photosystem I`GO:0009523^cellular_component^photosystem II`GO:0010287^cellular_component^plastoglobule`GO:0016168^molecular_function^chlorophyll binding`GO:0046872^molecular_function^metal ion binding`GO:0031409^molecular_function^pigment binding`GO:0009768^biological_process^photosynthesis, light harvesting in photosystem I`GO:0018298^biological_process^protein-chromophore linkage`GO:0009416^biological_process^response to light stimulus",".",".","."]
["TRINITY_DN44274_c2_g2","leaves S. yangii","roots S. yangii",8.1188847798476,0,0,"TRINITY_DN44274_c2_g2_i2","PPA1_SOLLC^PPA1_SOLLC^Q:890-243,H:40-254^44.29%ID^E:5e-49^RecName: Full=Acid phosphatase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44274_c2_g2_i2.p1","237-1055[-]","PPA1_SOLLC^PPA1_SOLLC^Q:56-271,H:40-254^44.75%ID^E:2e-56^RecName: Full=Acid phosphatase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF03767.11^Acid_phosphat_B^HAD superfamily, subfamily IIIB (Acid phosphatase)^53-271^E:1.8e-48","sigP:1^31^0.818^YES",".","ENOG410YBHH^Acid phosphatase",".","GO:0003993^molecular_function^acid phosphatase activity",".",".","."]
["TRINITY_DN46054_c0_g2","leaves S. yangii","roots S. yangii",8.08294467102659,0,0,"TRINITY_DN46054_c0_g2_i5","MDHG_CUCSA^MDHG_CUCSA^Q:242-1294,H:6-355^86.89%ID^E:0^RecName: Full=Malate dehydrogenase, glyoxysomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN46054_c0_g2_i5.p1","239-1300[+]","MDHG_CUCSA^MDHG_CUCSA^Q:2-352,H:6-355^86.89%ID^E:0^RecName: Full=Malate dehydrogenase, glyoxysomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF00056.20^Ldh_1_N^lactate/malate dehydrogenase, NAD binding domain^43-185^E:1.4e-45`PF02866.15^Ldh_1_C^lactate/malate dehydrogenase, alpha/beta C-terminal domain^187-350^E:2.7e-47",".",".",".","KEGG:csv:101219252`KO:K00026","GO:0009514^cellular_component^glyoxysome`GO:0030060^molecular_function^L-malate dehydrogenase activity`GO:0006097^biological_process^glyoxylate cycle`GO:0006108^biological_process^malate metabolic process`GO:0006099^biological_process^tricarboxylic acid cycle","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",".","."]
["TRINITY_DN46358_c2_g1","leaves S. yangii","roots S. yangii",8.07016189575543,0,0,"TRINITY_DN46358_c2_g1_i6","E13B_VITVI^E13B_VITVI^Q:1172-159,H:5-342^53.49%ID^E:5e-98^RecName: Full=Glucan endo-1,3-beta-glucosidase {ECO:0000250|UniProtKB:Q03467};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN46358_c2_g1_i6.p1","156-1169[-]","E13G_TOBAC^E13G_TOBAC^Q:26-336,H:32-340^56.29%ID^E:5e-114^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^26-336^E:1.4e-111","sigP:1^20^0.767^YES",".",".",".","GO:0005615^cellular_component^extracellular space`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45715_c3_g6","leaves S. yangii","roots S. yangii",8.04428478591046,0,0,"TRINITY_DN45715_c3_g6_i1","PGL1A_ARATH^PGL1A_ARATH^Q:255-1214,H:44-324^64.09%ID^E:2e-117^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45715_c3_g6_i1.p3","162-551[+]","PGL1A_ARATH^PGL1A_ARATH^Q:32-124,H:44-138^68.75%ID^E:1e-36^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4110C1Q^PGR5-like protein 1A","KEGG:ath:AT4G22890","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009579^cellular_component^thylakoid`GO:0042802^molecular_function^identical protein binding`GO:0016730^molecular_function^oxidoreductase activity, acting on iron-sulfur proteins as donors`GO:0015979^biological_process^photosynthesis`GO:0009773^biological_process^photosynthetic electron transport in photosystem I",".",".","."]
["TRINITY_DN46336_c4_g1","leaves S. yangii","roots S. yangii",8.02190803396152,0,0,"TRINITY_DN46336_c4_g1_i1","FENR1_PEA^FENR1_PEA^Q:1101-7,H:1-360^81.64%ID^E:0^RecName: Full=Ferredoxin--NADP reductase, leaf isozyme, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN46336_c4_g1_i1.p1","4-1101[-]","FENR1_PEA^FENR1_PEA^Q:1-365,H:1-360^81.64%ID^E:0^RecName: Full=Ferredoxin--NADP reductase, leaf isozyme, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00175.18^NAD_binding_1^Oxidoreductase NAD-binding domain^218-333^E:7.5e-30",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0004324^molecular_function^ferredoxin-NADP+ reductase activity`GO:0015979^biological_process^photosynthesis","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47261_c3_g1","leaves S. yangii","roots S. yangii",7.95283148316367,0,0,"TRINITY_DN47261_c3_g1_i1","AFS1_MALDO^AFS1_MALDO^Q:2049-337,H:16-574^41.23%ID^E:7e-136^RecName: Full=(E,E)-alpha-farnesene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus",".","TRINITY_DN47261_c3_g1_i1.p1","1114-2037[-]","TPS7_RICCO^TPS7_RICCO^Q:2-302,H:11-334^43.12%ID^E:4e-74^RecName: Full=Alpha-farnesene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^23-176^E:1.8e-30`PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^207-302^E:6.5e-34",".",".",".","KEGG:rcu:RCOM_0906600`KO:K14173","GO:0000287^molecular_function^magnesium ion binding`GO:0010334^molecular_function^sesquiterpene synthase activity`GO:0051762^biological_process^sesquiterpene biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN36708_c0_g2","leaves S. yangii","roots S. yangii",7.92833408725538,0,0,"TRINITY_DN36708_c0_g2_i3","TL16_ARATH^TL16_ARATH^Q:483-139,H:39-159^52.89%ID^E:1e-31^RecName: Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36708_c0_g2_i3.p1","85-603[-]","TL16_ARATH^TL16_ARATH^Q:14-153,H:13-157^48.65%ID^E:4e-33^RecName: Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XY5M^Thylakoid lumenal 16.5 kDa protein","KEGG:ath:AT4G02530","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0009735^biological_process^response to cytokinin",".",".","."]
["TRINITY_DN46223_c1_g1","leaves S. yangii","roots S. yangii",7.83345301123782,0,0,"TRINITY_DN46223_c1_g1_i1","PNSB4_ARATH^PNSB4_ARATH^Q:125-649,H:1-175^60.77%ID^E:8e-38^RecName: Full=Photosynthetic NDH subunit of subcomplex B 4, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46223_c1_g1_i1.p1","125-652[+]","PNSB4_ARATH^PNSB4_ARATH^Q:1-175,H:1-175^60.75%ID^E:5e-68^RecName: Full=Photosynthetic NDH subunit of subcomplex B 4, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YHJ2^NA",".","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010598^cellular_component^NAD(P)H dehydrogenase complex (plastoquinone)`GO:0009773^biological_process^photosynthetic electron transport in photosystem I`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN41680_c0_g1","leaves S. yangii","roots S. yangii",7.78763949591021,0,0,"TRINITY_DN41680_c0_g1_i2","STR14_ARATH^STR14_ARATH^Q:300-836,H:39-217^77.65%ID^E:1e-83^RecName: Full=Rhodanese-like domain-containing protein 14, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41680_c0_g1_i2.p1","159-854[+]","STR14_ARATH^STR14_ARATH^Q:2-231,H:1-222^66.38%ID^E:2e-102^RecName: Full=Rhodanese-like domain-containing protein 14, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00581.17^Rhodanese^Rhodanese-like domain^88-221^E:6.2e-14",".",".","ENOG4111JU1^Rhodanese-like domain containing protein","KEGG:ath:AT4G27700","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane",".",".","."]
["TRINITY_DN44209_c3_g2","leaves S. yangii","roots S. yangii",7.74916313550254,0,0,"TRINITY_DN44209_c3_g2_i2","GOLS1_AJURE^GOLS1_AJURE^Q:1282-335,H:1-319^80.43%ID^E:0^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga",".","TRINITY_DN44209_c3_g2_i2.p1","290-1282[-]","GOLS1_AJURE^GOLS1_AJURE^Q:1-330,H:1-333^80.95%ID^E:0^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga","PF01501.17^Glyco_transf_8^Glycosyl transferase family 8^30-272^E:2.1e-40",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0047216^molecular_function^inositol 3-alpha-galactosyltransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0052576^biological_process^carbohydrate storage`GO:0070417^biological_process^cellular response to cold`GO:0006012^biological_process^galactose metabolic process`GO:0008152^biological_process^metabolic process`GO:0010325^biological_process^raffinose family oligosaccharide biosynthetic process","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN45836_c0_g6","leaves S. yangii","roots S. yangii",7.74208488664568,0,0,"TRINITY_DN45836_c0_g6_i11","CRD1_GOSHI^CRD1_GOSHI^Q:1970-1212,H:153-405^95.26%ID^E:9e-162^RecName: Full=Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium",".","TRINITY_DN45836_c0_g6_i11.p2","1209-1928[-]","CRD1_GOSHI^CRD1_GOSHI^Q:1-239,H:167-405^95.4%ID^E:7e-172^RecName: Full=Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium","PF02915.14^Rubrerythrin^Rubrerythrin^1-97^E:2.4e-28",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0048529^molecular_function^magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity`GO:0046872^molecular_function^metal ion binding`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0015979^biological_process^photosynthesis","GO:0016491^molecular_function^oxidoreductase activity`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46799_c1_g2","leaves S. yangii","roots S. yangii",7.71826071366134,0,0,"TRINITY_DN46799_c1_g2_i16","HPR1_ARATH^HPR1_ARATH^Q:404-1381,H:1-326^91.1%ID^E:0^RecName: Full=Glycerate dehydrogenase HPR, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HPR1_ARATH^HPR1_ARATH^Q:1697-2032,H:305-386^50%ID^E:2e-21^RecName: Full=Glycerate dehydrogenase HPR, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46799_c1_g2_i16.p1","404-1402[+]","HPR1_ARATH^HPR1_ARATH^Q:1-326,H:1-326^91.1%ID^E:0^RecName: Full=Glycerate dehydrogenase HPR, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00389.27^2-Hacid_dh^D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain^36-142^E:3.7e-15`PF02826.16^2-Hacid_dh_C^D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain^130-322^E:1e-46",".",".","COG1052^Dehydrogenase","KEGG:ath:AT1G68010`KO:K15893","GO:0005777^cellular_component^peroxisome`GO:0008465^molecular_function^glycerate dehydrogenase activity`GO:0051287^molecular_function^NAD binding`GO:0071482^biological_process^cellular response to light stimulus`GO:0042631^biological_process^cellular response to water deprivation`GO:0009854^biological_process^oxidative photosynthetic carbon pathway","GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0051287^molecular_function^NAD binding`GO:0008152^biological_process^metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46247_c3_g1","leaves S. yangii","roots S. yangii",7.68596542630709,0,0,"TRINITY_DN46247_c3_g1_i3","NIFU3_ARATH^NIFU3_ARATH^Q:900-247,H:1-236^64.98%ID^E:7e-91^RecName: Full=NifU-like protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46247_c3_g1_i3.p1","244-900[-]","NIFU3_ARATH^NIFU3_ARATH^Q:1-218,H:1-236^64.98%ID^E:5e-94^RecName: Full=NifU-like protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01106.14^NifU^NifU-like domain^72-137^E:1.4e-25`PF01106.14^NifU^NifU-like domain^153-214^E:5.4e-12",".",".","COG0694^metallo-sulfur cluster assembly","KEGG:ath:AT4G25910","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005506^molecular_function^iron ion binding`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0005198^molecular_function^structural molecule activity`GO:0016226^biological_process^iron-sulfur cluster assembly","GO:0005506^molecular_function^iron ion binding`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0016226^biological_process^iron-sulfur cluster assembly",".","."]
["TRINITY_DN42129_c0_g1","leaves S. yangii","roots S. yangii",7.57201447310382,0,0,"TRINITY_DN42129_c0_g1_i8","MDHP_MEDSA^MDHP_MEDSA^Q:1563-265,H:3-437^82.57%ID^E:0^RecName: Full=Malate dehydrogenase [NADP], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN42129_c0_g1_i8.p1","262-1581[-]","MDHP_MEDSA^MDHP_MEDSA^Q:7-439,H:3-437^82.57%ID^E:0^RecName: Full=Malate dehydrogenase [NADP], chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF00056.20^Ldh_1_N^lactate/malate dehydrogenase, NAD binding domain^98-245^E:2.5e-34`PF02866.15^Ldh_1_C^lactate/malate dehydrogenase, alpha/beta C-terminal domain^248-418^E:1.3e-37",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0046554^molecular_function^malate dehydrogenase (NADP+) activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006108^biological_process^malate metabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",".","."]
["TRINITY_DN42329_c0_g2","leaves S. yangii","roots S. yangii",7.50442001802554,0,0,"TRINITY_DN42329_c0_g2_i2","GSTF_HYOMU^GSTF_HYOMU^Q:129-752,H:3-209^47.6%ID^E:3e-66^RecName: Full=Glutathione S-transferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Hyoscyamus",".","TRINITY_DN42329_c0_g2_i2.p1","117-785[+]","GSTF_HYOMU^GSTF_HYOMU^Q:5-212,H:3-209^47.6%ID^E:1e-67^RecName: Full=Glutathione S-transferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Hyoscyamus","PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^4-76^E:1.1e-16`PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^8-82^E:2.1e-11`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^13-78^E:5.8e-09`PF00043.22^GST_C^Glutathione S-transferase, C-terminal domain^127-205^E:1.6e-13`PF14497.3^GST_C_3^Glutathione S-transferase, C-terminal domain^133-208^E:5.9e-05`PF13410.3^GST_C_2^Glutathione S-transferase, C-terminal domain^135-197^E:2.6e-07",".",".",".",".","GO:0004364^molecular_function^glutathione transferase activity`GO:0009734^biological_process^auxin-activated signaling pathway","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN23293_c0_g1","leaves S. yangii","roots S. yangii",7.40897269000199,0,0,"TRINITY_DN23293_c0_g1_i1","ATPX_SPIOL^ATPX_SPIOL^Q:839-390,H:72-221^81.33%ID^E:7e-69^RecName: Full=ATP synthase subunit b', chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN23293_c0_g1_i1.p1","384-1040[-]","ATPX_SPIOL^ATPX_SPIOL^Q:56-218,H:60-222^77.3%ID^E:4e-82^RecName: Full=ATP synthase subunit b', chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00430.15^ATP-synt_B^ATP synthase B/B' CF(0)^86-215^E:4.7e-15`PF01442.15^Apolipoprotein^Apolipoprotein A1/A4/E domain^125-213^E:0.0045",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0045263^cellular_component^proton-transporting ATP synthase complex, coupling factor F(o)`GO:0005524^molecular_function^ATP binding`GO:0015078^molecular_function^hydrogen ion transmembrane transporter activity`GO:0015986^biological_process^ATP synthesis coupled proton transport","GO:0015078^molecular_function^hydrogen ion transmembrane transporter activity`GO:0015986^biological_process^ATP synthesis coupled proton transport`GO:0045263^cellular_component^proton-transporting ATP synthase complex, coupling factor F(o)`GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport`GO:0042157^biological_process^lipoprotein metabolic process`GO:0005576^cellular_component^extracellular region",".","."]
["TRINITY_DN45400_c2_g1","leaves S. yangii","roots S. yangii",7.35016836270071,0,0,"TRINITY_DN45400_c2_g1_i3","TL203_ARATH^TL203_ARATH^Q:2826-2383,H:1-163^55.76%ID^E:8e-37^RecName: Full=Thylakoid lumenal protein TL20.3, chloroplastic {ECO:0000303|PubMed:20049866};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TL203_ARATH^TL203_ARATH^Q:682-497,H:217-278^85.48%ID^E:5e-16^RecName: Full=Thylakoid lumenal protein TL20.3, chloroplastic {ECO:0000303|PubMed:20049866};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TL203_ARATH^TL203_ARATH^Q:1058-912,H:175-223^83.67%ID^E:1e-14^RecName: Full=Thylakoid lumenal protein TL20.3, chloroplastic {ECO:0000303|PubMed:20049866};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45400_c2_g1_i3.p1","2380-2826[-]","TL203_ARATH^TL203_ARATH^Q:1-148,H:1-163^55.76%ID^E:1e-41^RecName: Full=Thylakoid lumenal protein TL20.3, chloroplastic {ECO:0000303|PubMed:20049866};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00805.19^Pentapeptide^Pentapeptide repeats (8 copies)^94-133^E:3.4e-07`PF00805.19^Pentapeptide^Pentapeptide repeats (8 copies)^110-148^E:4.1e-08",".",".","COG1357^pathogenesis",".","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid",".",".","."]
["TRINITY_DN45977_c0_g1","leaves S. yangii","roots S. yangii",7.34827192489773,0,0,"TRINITY_DN45977_c0_g1_i1","NLTP2_SOLPN^NLTP2_SOLPN^Q:626-291,H:1-112^57.14%ID^E:2e-37^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45977_c0_g1_i1.p2","288-638[-]","NLTP2_SOLPN^NLTP2_SOLPN^Q:5-116,H:1-112^57.14%ID^E:3e-39^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF14368.3^LTP_2^Probable lipid transfer^11-106^E:5e-06`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^31-114^E:1.9e-08","sigP:1^27^0.864^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN45288_c5_g1","leaves S. yangii","roots S. yangii",7.30689604006946,0,0,"TRINITY_DN45288_c5_g1_i1","LYK4_ARATH^LYK4_ARATH^Q:19-1857,H:7-600^45.65%ID^E:2e-155^RecName: Full=LysM domain receptor-like kinase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45288_c5_g1_i1.p1","1-1887[+]","LYK4_ARATH^LYK4_ARATH^Q:7-619,H:7-600^46.23%ID^E:5e-171^RecName: Full=LysM domain receptor-like kinase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01476.17^LysM^LysM domain^123-168^E:0.013`PF00069.22^Pkinase^Protein kinase domain^378-614^E:3.8e-38`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^381-615^E:2.6e-36","sigP:1^21^0.904^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G23770","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0008061^molecular_function^chitin binding`GO:0004672^molecular_function^protein kinase activity`GO:0071323^biological_process^cellular response to chitin`GO:0071219^biological_process^cellular response to molecule of bacterial origin`GO:0045087^biological_process^innate immune response","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44454_c2_g1","leaves S. yangii","roots S. yangii",7.29472374259612,0,0,"TRINITY_DN44454_c2_g1_i3","U86A1_ARATH^U86A1_ARATH^Q:789-1622,H:198-477^57.04%ID^E:3e-148^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U86A1_ARATH^U86A1_ARATH^Q:224-751,H:1-178^64.25%ID^E:3e-148^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44454_c2_g1_i3.p1","654-1649[+]","U86A1_ARATH^U86A1_ARATH^Q:46-323,H:198-477^57.04%ID^E:2e-105^RecName: Full=UDP-glycosyltransferase 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^132-251^E:4e-20",".",".","COG1819^Transferase","KEGG:ath:AT2G36970","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN39557_c0_g1","leaves S. yangii","roots S. yangii",7.29356502933876,0,0,"TRINITY_DN39557_c0_g1_i2","RFA1A_ARATH^RFA1A_ARATH^Q:296-2173,H:1-636^68.49%ID^E:0^RecName: Full=Replication protein A 70 kDa DNA-binding subunit A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39557_c0_g1_i2.p1","296-2206[+]","RFA1A_ARATH^RFA1A_ARATH^Q:1-626,H:1-636^68.49%ID^E:0^RecName: Full=Replication protein A 70 kDa DNA-binding subunit A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04057.9^Rep-A_N^Replication factor-A protein 1, N-terminal domain^5-97^E:4.8e-30`PF01336.22^tRNA_anti-codon^OB-fold nucleic acid binding domain^202-283^E:2.2e-10`PF16900.2^REPA_OB_2^Replication protein A OB domain^311-415^E:8.6e-30`PF08646.7^Rep_fac-A_C^Replication factor-A C terminal domain^473-623^E:1.6e-50",".",".","COG1599^DNA replication","KEGG:ath:AT2G06510`KO:K07466","GO:0000790^cellular_component^nuclear chromatin`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0051026^biological_process^chiasma assembly`GO:0006281^biological_process^DNA repair`GO:0006260^biological_process^DNA replication`GO:0048232^biological_process^male gamete generation`GO:0007141^biological_process^male meiosis I`GO:0009555^biological_process^pollen development`GO:0007131^biological_process^reciprocal meiotic recombination","GO:0003677^molecular_function^DNA binding`GO:0006260^biological_process^DNA replication`GO:0005634^cellular_component^nucleus`GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN30706_c0_g1","leaves S. yangii","roots S. yangii",7.24619265336802,0,0,"TRINITY_DN30706_c0_g1_i1","CHLP_TOBAC^CHLP_TOBAC^Q:198-1580,H:1-464^89.22%ID^E:0^RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN30706_c0_g1_i1.p1","198-1583[+]","CHLP_TOBAC^CHLP_TOBAC^Q:1-461,H:1-464^89.22%ID^E:0^RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01494.16^FAD_binding_3^FAD binding domain^51-83^E:3.3e-05`PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^51-220^E:4.2e-06`PF01134.19^GIDA^Glucose inhibited division protein A^52-86^E:4.8e-05",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0071949^molecular_function^FAD binding`GO:0045550^molecular_function^geranylgeranyl reductase activity`GO:0016628^molecular_function^oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0033385^biological_process^geranylgeranyl diphosphate metabolic process`GO:0015979^biological_process^photosynthesis`GO:0033521^biological_process^phytyl diphosphate biosynthetic process`GO:0010189^biological_process^vitamin E biosynthetic process","GO:0071949^molecular_function^FAD binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0008033^biological_process^tRNA processing",".","."]
["TRINITY_DN47557_c1_g2","leaves S. yangii","roots S. yangii",7.21540447231505,0,0,"TRINITY_DN47557_c1_g2_i2","GEDH1_OCIBA^GEDH1_OCIBA^Q:1427-348,H:1-360^89.17%ID^E:0^RecName: Full=Geraniol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum",".","TRINITY_DN47557_c1_g2_i2.p1","345-1427[-]","GEDH1_OCIBA^GEDH1_OCIBA^Q:1-360,H:1-360^89.17%ID^E:0^RecName: Full=Geraniol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^38-150^E:1.9e-27`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^194-317^E:6.3e-19",".",".",".",".","GO:0047924^molecular_function^geraniol dehydrogenase activity`GO:0008270^molecular_function^zinc ion binding","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN41072_c0_g1","leaves S. yangii","roots S. yangii",7.14628265911798,0,0,"TRINITY_DN41072_c0_g1_i11","PRRP1_ARATH^PRRP1_ARATH^Q:2818-1115,H:1-570^57.29%ID^E:0^RecName: Full=Proteinaceous RNase P 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41072_c0_g1_i11.p1","1103-2821[-]","PRRP1_ARATH^PRRP1_ARATH^Q:2-569,H:1-570^57.29%ID^E:0^RecName: Full=Proteinaceous RNase P 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^88-297^E:3.8e-78`PF01535.17^PPR^PPR repeat^104-124^E:0.45`PF16953.2^PRORP^Protein-only RNase P^337-564^E:8.6e-74`PF11977.5^RNase_Zc3h12a^Zc3h12a-like Ribonuclease NYN domain^396-504^E:6.5e-05",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT2G32230`KO:K18213","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0004526^molecular_function^ribonuclease P activity`GO:0090501^biological_process^RNA phosphodiester bond hydrolysis`GO:0090502^biological_process^RNA phosphodiester bond hydrolysis, endonucleolytic`GO:0001682^biological_process^tRNA 5'-leader removal`GO:0008033^biological_process^tRNA processing",".",".","."]
["TRINITY_DN47486_c2_g1","leaves S. yangii","roots S. yangii",7.10558979034936,0,0,"TRINITY_DN47486_c2_g1_i1","C82G1_ARATH^C82G1_ARATH^Q:1651-206,H:38-513^50.62%ID^E:1e-172^RecName: Full=Cytochrome P450 82G1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47486_c2_g1_i1.p1","197-1759[-]","C82G1_ARATH^C82G1_ARATH^Q:10-518,H:6-513^49.22%ID^E:3e-176^RecName: Full=Cytochrome P450 82G1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^39-501^E:2.1e-90",".",".","COG2124^Cytochrome p450","KEGG:ath:AT3G25180`KO:K17961","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0097008^molecular_function^(3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity`GO:0097007^molecular_function^4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0006952^biological_process^defense response`GO:0044550^biological_process^secondary metabolite biosynthetic process`GO:0046246^biological_process^terpene biosynthetic process`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44681_c2_g2","leaves S. yangii","roots S. yangii",7.07396358979961,0,0,"TRINITY_DN44681_c2_g2_i1","ATPD_TOBAC^ATPD_TOBAC^Q:339-1061,H:4-246^66.39%ID^E:5e-101^RecName: Full=ATP synthase delta chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44681_c2_g2_i1.p1","54-1070[+]","ATPD_TOBAC^ATPD_TOBAC^Q:94-336,H:2-246^67.21%ID^E:3e-110^RecName: Full=ATP synthase delta chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00213.15^OSCP^ATP synthase delta (OSCP) subunit^156-329^E:1.1e-41",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0045261^cellular_component^proton-transporting ATP synthase complex, catalytic core F(1)`GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport","GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport",".","."]
["TRINITY_DN45685_c1_g1","leaves S. yangii","roots S. yangii",7.04990990188073,0,0,"TRINITY_DN45685_c1_g1_i4","GLO1_ARATH^GLO1_ARATH^Q:873-274,H:170-367^88%ID^E:4e-131^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLO1_ARATH^GLO1_ARATH^Q:1145-933,H:104-174^95.77%ID^E:4e-131^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLO1_ARATH^GLO1_ARATH^Q:2174-1911,H:2-89^92.05%ID^E:2e-46^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45685_c1_g1_i4.p1","271-810[-]","GLO2_ARATH^GLO2_ARATH^Q:1-175,H:191-365^89.71%ID^E:3e-112^RecName: Full=Peroxisomal (S)-2-hydroxy-acid oxidase GLO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01070.15^FMN_dh^FMN-dependent dehydrogenase^8-165^E:4.4e-68`PF01645.14^Glu_synthase^Conserved region in glutamate synthase^84-125^E:0.00016",".",".","COG1304^Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity)",".","GO:0005777^cellular_component^peroxisome`GO:0010181^molecular_function^FMN binding`GO:0052853^molecular_function^long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity`GO:0052854^molecular_function^medium-chain-(S)-2-hydroxy-acid oxidase activity`GO:0052852^molecular_function^very-long-chain-(S)-2-hydroxy-acid oxidase activity`GO:0009854^biological_process^oxidative photosynthetic carbon pathway","GO:0016491^molecular_function^oxidoreductase activity`GO:0015930^molecular_function^glutamate synthase activity`GO:0016638^molecular_function^oxidoreductase activity, acting on the CH-NH2 group of donors`GO:0006537^biological_process^glutamate biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN37331_c0_g1","leaves S. yangii","roots S. yangii",7.03850160264845,"0.000379218051486449","0.000555404506571574","TRINITY_DN37331_c0_g1_i1","AB19A_PRUPE^AB19A_PRUPE^Q:789-220,H:20-208^72.63%ID^E:6e-91^RecName: Full=Auxin-binding protein ABP19a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN37331_c0_g1_i1.p1","214-852[-]","AB19A_PRUPE^AB19A_PRUPE^Q:7-211,H:5-208^71.22%ID^E:9e-100^RecName: Full=Auxin-binding protein ABP19a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00190.19^Cupin_1^Cupin^57-202^E:9.6e-34`PF07883.8^Cupin_2^Cupin domain^92-163^E:2.3e-07","sigP:1^20^0.792^YES",".",".","KEGG:pper:PRUPE_ppa011467mg","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0030145^molecular_function^manganese ion binding`GO:0045735^molecular_function^nutrient reservoir activity`GO:0009734^biological_process^auxin-activated signaling pathway","GO:0045735^molecular_function^nutrient reservoir activity",".","."]
["TRINITY_DN45740_c5_g1","leaves S. yangii","roots S. yangii",7.02946832004417,0,0,"TRINITY_DN45740_c5_g1_i6","BEBT_TOBAC^BEBT_TOBAC^Q:1681-314,H:6-460^75.88%ID^E:0^RecName: Full=Benzyl alcohol O-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45740_c5_g1_i6.p1","311-1693[-]","BEBT_TOBAC^BEBT_TOBAC^Q:5-460,H:6-460^75.88%ID^E:0^RecName: Full=Benzyl alcohol O-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF02458.12^Transferase^Transferase family^11-439^E:3.4e-83",".",".",".",".","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN43854_c0_g1","leaves S. yangii","roots S. yangii",6.97405035297182,0,0,"TRINITY_DN43854_c0_g1_i10","CHUP1_ARATH^CHUP1_ARATH^Q:678-3380,H:1-914^66.88%ID^E:0^RecName: Full=Protein CHUP1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43854_c0_g1_i10.p1","678-3380[+]","CHUP1_ARATH^CHUP1_ARATH^Q:1-901,H:1-914^68.37%ID^E:0^RecName: Full=Protein CHUP1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^17^0.539^YES",".","ENOG4111F63^Chloroplast unusual positioning","KEGG:ath:AT3G25690","GO:0009507^cellular_component^chloroplast`GO:0009707^cellular_component^chloroplast outer membrane`GO:0009902^biological_process^chloroplast relocation",".",".","."]
["TRINITY_DN46595_c1_g1","leaves S. yangii","roots S. yangii",6.94785055778973,0,0,"TRINITY_DN46595_c1_g1_i3","TRXM4_ARATH^TRXM4_ARATH^Q:870-436,H:41-191^59.48%ID^E:1e-54^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46595_c1_g1_i3.p1","433-957[-]","TRXM4_ARATH^TRXM4_ARATH^Q:1-174,H:1-191^51.3%ID^E:3e-59^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^71-172^E:8.9e-31`PF13098.3^Thioredoxin_2^Thioredoxin-like domain^86-167^E:1.8e-07`PF14595.3^Thioredoxin_9^Thioredoxin^94-164^E:2.9e-07",".",".","COG0526^Thioredoxin","KEGG:ath:AT3G15360`KO:K03671","GO:0005618^cellular_component^cell wall`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0008047^molecular_function^enzyme activator activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0043086^biological_process^negative regulation of catalytic activity`GO:0055114^biological_process^oxidation-reduction process`GO:0043085^biological_process^positive regulation of catalytic activity`GO:0006457^biological_process^protein folding`GO:0006109^biological_process^regulation of carbohydrate metabolic process`GO:0009735^biological_process^response to cytokinin`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN46619_c3_g2","leaves S. yangii","roots S. yangii",6.93698631267929,0,0,"TRINITY_DN46619_c3_g2_i1","TL19_ARATH^TL19_ARATH^Q:1237-794,H:79-226^75.68%ID^E:2e-77^RecName: Full=Thylakoid lumenal 19 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46619_c3_g2_i1.p1","788-1510[-]","TL19_ARATH^TL19_ARATH^Q:70-239,H:57-226^77.65%ID^E:3e-100^RecName: Full=Thylakoid lumenal 19 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01789.13^PsbP^PsbP^95-237^E:5e-10",".",".","ENOG4111I6X^Thylakoid lumenal 19 kDa protein","KEGG:ath:AT3G63540","GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0019898^cellular_component^extrinsic component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN47690_c0_g2","leaves S. yangii","roots S. yangii",6.91014704505915,0,0,"TRINITY_DN47690_c0_g2_i4","YSL3_ARATH^YSL3_ARATH^Q:2335-389,H:19-669^64.82%ID^E:0^RecName: Full=Metal-nicotianamine transporter YSL3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47690_c0_g2_i4.p1","365-2335[-]","YSL3_ARATH^YSL3_ARATH^Q:1-649,H:19-669^64.82%ID^E:0^RecName: Full=Metal-nicotianamine transporter YSL3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03169.12^OPT^OPT oligopeptide transporter protein^22-635^E:7.3e-135",".",".","COG1297^oligo-peptide transporter","KEGG:ath:AT5G53550","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0003006^biological_process^developmental process involved in reproduction`GO:0006811^biological_process^ion transport`GO:0055072^biological_process^iron ion homeostasis`GO:0009624^biological_process^response to nematode`GO:0048316^biological_process^seed development`GO:0055085^biological_process^transmembrane transport","GO:0055085^biological_process^transmembrane transport",".","."]
["TRINITY_DN39126_c0_g1","leaves S. yangii","roots S. yangii",6.89397011951385,0,0,"TRINITY_DN39126_c0_g1_i5","PNSB5_ARATH^PNSB5_ARATH^Q:1055-1408,H:95-212^73.73%ID^E:4e-57^RecName: Full=Photosynthetic NDH subunit of subcomplex B 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PNSB5_ARATH^PNSB5_ARATH^Q:140-418,H:3-92^40%ID^E:2e-10^RecName: Full=Photosynthetic NDH subunit of subcomplex B 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39126_c0_g1_i5.p1","125-454[+]","PNSB5_ARATH^PNSB5_ARATH^Q:5-98,H:2-92^39.6%ID^E:1e-12^RecName: Full=Photosynthetic NDH subunit of subcomplex B 5, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG41127XZ^NA","KEGG:ath:AT5G43750","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0006979^biological_process^response to oxidative stress`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN45468_c6_g3","leaves S. yangii","roots S. yangii",6.89019606406648,0,0,"TRINITY_DN45468_c6_g3_i4","ACR11_ARATH^ACR11_ARATH^Q:1678-1148,H:70-247^75.84%ID^E:9e-86^RecName: Full=ACT domain-containing protein ACR11 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ACR11_ARATH^ACR11_ARATH^Q:658-530,H:248-290^86.05%ID^E:3e-15^RecName: Full=ACT domain-containing protein ACR11 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45468_c6_g3_i4.p1","1064-1546[-]","ACR11_ARATH^ACR11_ARATH^Q:1-133,H:114-247^76.12%ID^E:1e-68^RecName: Full=ACT domain-containing protein ACR11 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YCUP^protein DS12 from 2D-PAGE of leaf, chloroplastic","KEGG:ath:AT1G16880","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010319^cellular_component^stromule`GO:0016597^molecular_function^amino acid binding`GO:0008152^biological_process^metabolic process`GO:0009409^biological_process^response to cold`GO:0009735^biological_process^response to cytokinin`GO:0009416^biological_process^response to light stimulus`GO:0009744^biological_process^response to sucrose",".",".","."]
["TRINITY_DN43220_c0_g1","leaves S. yangii","roots S. yangii",6.85237994514295,0,0,"TRINITY_DN43220_c0_g1_i1","ROC1_NICSY^ROC1_NICSY^Q:1258-731,H:82-267^42.47%ID^E:2e-39^RecName: Full=29 kDa ribonucleoprotein A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC1_NICSY^ROC1_NICSY^Q:1243-995,H:188-270^40.96%ID^E:2e-11^RecName: Full=29 kDa ribonucleoprotein A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43220_c0_g1_i1.p1","722-1573[-]","ROC1_NICSY^ROC1_NICSY^Q:92-281,H:68-267^41%ID^E:1e-45^RecName: Full=29 kDa ribonucleoprotein A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC1_NICSY^ROC1_NICSY^Q:111-193,H:188-270^40.96%ID^E:8e-12^RecName: Full=29 kDa ribonucleoprotein A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^113-183^E:1.2e-12`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^152-189^E:0.15`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^204-273^E:8.8e-20",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN39768_c0_g1","leaves S. yangii","roots S. yangii",6.84775295223136,0,0,"TRINITY_DN39768_c0_g1_i4","FKB13_ARATH^FKB13_ARATH^Q:649-212,H:1-145^46.2%ID^E:2e-26^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic {ECO:0000303|PubMed:12424338};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39768_c0_g1_i4.p1","197-649[-]","FKB13_ARATH^FKB13_ARATH^Q:1-146,H:1-145^46.2%ID^E:7e-34^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic {ECO:0000303|PubMed:12424338};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00254.25^FKBP_C^FKBP-type peptidyl-prolyl cis-trans isomerase^105-146^E:5.4e-11",".",".","COG0545^Peptidyl-prolyl cis-trans isomerase","KEGG:ath:AT5G45680`KO:K01802","GO:0009507^cellular_component^chloroplast`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0031977^cellular_component^thylakoid lumen`GO:0005528^molecular_function^FK506 binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0061077^biological_process^chaperone-mediated protein folding`GO:0000413^biological_process^protein peptidyl-prolyl isomerization","GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN46835_c1_g5","leaves S. yangii","roots S. yangii",6.83927896342283,0,0,"TRINITY_DN46835_c1_g5_i1","PSAF_FLATR^PSAF_FLATR^Q:1707-1027,H:1-232^68.97%ID^E:2e-102^RecName: Full=Photosystem I reaction center subunit III, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Tageteae; Flaveria",".","TRINITY_DN46835_c1_g5_i1.p1","1024-1707[-]","PSAF_ARATH^PSAF_ARATH^Q:1-227,H:1-221^72.69%ID^E:1e-111^RecName: Full=Photosystem I reaction center subunit III, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02507.12^PSI_PsaF^Photosystem I reaction centre subunit III^63-225^E:1.1e-80",".",".","ENOG4111JQH^photosystem i","KEGG:ath:AT1G31330`KO:K02694","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009538^cellular_component^photosystem I reaction center`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis`GO:0009522^cellular_component^photosystem I`GO:0009538^cellular_component^photosystem I reaction center",".","."]
["TRINITY_DN47583_c2_g3","leaves S. yangii","roots S. yangii",6.82207138076702,0,0,"TRINITY_DN47583_c2_g3_i1","Y2766_ARATH^Y2766_ARATH^Q:1138-1836,H:89-318^29.13%ID^E:2e-15^RecName: Full=Uncharacterized protein At2g37660, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47583_c2_g3_i1.p1","1501-1854[+]","SARED_ESCCA^SARED_ESCCA^Q:6-112,H:171-266^31.53%ID^E:2e-08^RecName: Full=Sanguinarine reductase {ECO:0000303|PubMed:17080644};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Ranunculales; Papaveraceae; Eschscholzioideae; Eschscholzia","PF13460.3^NAD_binding_10^NAD(P)H-binding^4-82^E:1.8e-10",".",".",".",".","GO:0016491^molecular_function^oxidoreductase activity`GO:0009636^biological_process^response to toxic substance",".",".","."]
["TRINITY_DN44976_c2_g1","leaves S. yangii","roots S. yangii",6.80489031555378,0,0,"TRINITY_DN44976_c2_g1_i7","NLTP1_TOBAC^NLTP1_TOBAC^Q:477-208,H:25-114^62.22%ID^E:3e-21^RecName: Full=Non-specific lipid-transfer protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44976_c2_g1_i7.p1","205-561[-]","NLTP2_SOLPN^NLTP2_SOLPN^Q:1-118,H:1-114^55.08%ID^E:3e-38^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF14368.3^LTP_2^Probable lipid transfer^14-106^E:3e-05`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^31-114^E:8.4e-08","sigP:1^27^0.827^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN43322_c0_g1","leaves S. yangii","roots S. yangii",6.79103386568871,0,0,"TRINITY_DN43322_c0_g1_i6","EGY2_ORYSJ^EGY2_ORYSJ^Q:1409-1125,H:131-221^64.21%ID^E:5e-43^RecName: Full=Probable zinc metalloprotease EGY2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`EGY2_ORYSJ^EGY2_ORYSJ^Q:1050-883,H:217-274^63.79%ID^E:5e-43^RecName: Full=Probable zinc metalloprotease EGY2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`EGY2_ORYSJ^EGY2_ORYSJ^Q:432-265,H:289-344^62.5%ID^E:1e-14^RecName: Full=Probable zinc metalloprotease EGY2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`EGY2_ORYSJ^EGY2_ORYSJ^Q:829-722,H:256-291^72.22%ID^E:9e-07^RecName: Full=Probable zinc metalloprotease EGY2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43322_c0_g1_i6.p1","208-531[-]","EGY2_ARATH^EGY2_ARATH^Q:34-89,H:299-354^67.86%ID^E:1e-19^RecName: Full=Probable zinc metalloprotease EGY2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0750^Membrane-associated zinc metalloprotease",".","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0004222^molecular_function^metalloendopeptidase activity",".",".","."]
["TRINITY_DN46085_c3_g1","leaves S. yangii","roots S. yangii",6.75195997925767,0,0,"TRINITY_DN46085_c3_g1_i6","PHOT2_ARATH^PHOT2_ARATH^Q:1725-424,H:475-910^77.75%ID^E:0^RecName: Full=Phototropin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHOT2_ARATH^PHOT2_ARATH^Q:3283-1781,H:19-484^61.42%ID^E:1e-176^RecName: Full=Phototropin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHOT2_ARATH^PHOT2_ARATH^Q:2896-2525,H:379-502^44.35%ID^E:3e-27^RecName: Full=Phototropin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46085_c3_g1_i6.p1","1769-3286[-]","PHOT2_ARATH^PHOT2_ARATH^Q:2-502,H:19-484^61.57%ID^E:0^RecName: Full=Phototropin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHOT2_ARATH^PHOT2_ARATH^Q:131-254,H:379-502^44.35%ID^E:9e-29^RecName: Full=Phototropin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13426.4^PAS_9^PAS domain^149-245^E:3.4e-20`PF00989.22^PAS^PAS fold^155-240^E:2.2e-08`PF08447.9^PAS_3^PAS fold^155-239^E:2.8e-08`PF13426.4^PAS_9^PAS domain^417-497^E:1.4e-16",".",".","COG2202^Histidine kinase",".","GO:0005794^cellular_component^Golgi apparatus`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0009882^molecular_function^blue light photoreceptor activity`GO:0010181^molecular_function^FMN binding`GO:0042802^molecular_function^identical protein binding`GO:0016301^molecular_function^kinase activity`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009785^biological_process^blue light signaling pathway`GO:0009902^biological_process^chloroplast relocation`GO:0007623^biological_process^circadian rhythm`GO:0035556^biological_process^intracellular signal transduction`GO:0010362^biological_process^negative regulation of anion channel activity by blue light`GO:0009638^biological_process^phototropism`GO:0046777^biological_process^protein autophosphorylation`GO:0018298^biological_process^protein-chromophore linkage`GO:0009637^biological_process^response to blue light`GO:0009735^biological_process^response to cytokinin`GO:0010118^biological_process^stomatal movement","GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44342_c1_g2","leaves S. yangii","roots S. yangii",6.68658932744755,0,0,"TRINITY_DN44342_c1_g2_i3","PPH_ARATH^PPH_ARATH^Q:1133-273,H:93-416^27.49%ID^E:6e-30^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44342_c1_g2_i3.p1","249-1358[-]","PPH_ARATH^PPH_ARATH^Q:76-362,H:93-416^27.49%ID^E:7e-31^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^96-343^E:1.1e-19`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^97-351^E:1.5e-22`PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^97-325^E:6.2e-14",".",".","COG0596^Alpha beta hydrolase","KEGG:ath:AT5G13800","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0080124^molecular_function^pheophytinase activity`GO:0015996^biological_process^chlorophyll catabolic process",".",".","."]
["TRINITY_DN47486_c5_g2","leaves S. yangii","roots S. yangii",6.61033209102651,0,0,"TRINITY_DN47486_c5_g2_i1","C14C2_ORYSJ^C14C2_ORYSJ^Q:1555-530,H:178-522^46.67%ID^E:6e-102^RecName: Full=Cytochrome P450 714C2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47486_c5_g2_i1.p1","500-1552[-]","C14C2_ORYSJ^C14C2_ORYSJ^Q:1-341,H:179-522^47.25%ID^E:4e-109^RecName: Full=Cytochrome P450 714C2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00067.19^p450^Cytochrome P450^2-318^E:2.2e-62",".",".","COG2124^Cytochrome p450","KEGG:osa:4351346","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46883_c0_g1","leaves S. yangii","roots S. yangii",6.56543549464349,0,0,"TRINITY_DN46883_c0_g1_i33","OHK1_ORYSI^OHK1_ORYSI^Q:437-3391,H:7-966^51.07%ID^E:0^RecName: Full=Probable histidine kinase 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46883_c0_g1_i33.p1","410-3397[+]","OHK1_ORYSI^OHK1_ORYSI^Q:10-994,H:7-966^52.02%ID^E:0^RecName: Full=Probable histidine kinase 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00512.22^HisKA^His Kinase A (phospho-acceptor) domain^372-435^E:8.9e-18`PF02518.23^HATPase_c^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^481-673^E:4.7e-27`PF00072.21^Response_reg^Response regulator receiver domain^848-915^E:8.7e-14`PF00072.21^Response_reg^Response regulator receiver domain^943-989^E:0.00014",".",".","COG0642^Histidine kinase",".","GO:0005773^cellular_component^vacuole`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0043481^biological_process^anthocyanin accumulation in tissues in response to UV light`GO:0048440^biological_process^carpel development`GO:0070301^biological_process^cellular response to hydrogen peroxide`GO:0071219^biological_process^cellular response to molecule of bacterial origin`GO:0071732^biological_process^cellular response to nitric oxide`GO:0009736^biological_process^cytokinin-activated signaling pathway`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:0010105^biological_process^negative regulation of ethylene-activated signaling pathway`GO:0090333^biological_process^regulation of stomatal closure`GO:0048364^biological_process^root development`GO:0010048^biological_process^vernalization response","GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0007165^biological_process^signal transduction`GO:0000160^biological_process^phosphorelay signal transduction system",".","."]
["TRINITY_DN45124_c2_g1","leaves S. yangii","roots S. yangii",6.54514444011531,0,0,"TRINITY_DN45124_c2_g1_i8","GLNA2_DAUCA^GLNA2_DAUCA^Q:520-1617,H:1-366^89.34%ID^E:0^RecName: Full=Glutamine synthetase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus`GLNA2_DAUCA^GLNA2_DAUCA^Q:1970-2191,H:359-432^85.14%ID^E:1e-14^RecName: Full=Glutamine synthetase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45124_c2_g1_i8.p1","520-1788[+]","GLNA2_DAUCA^GLNA2_DAUCA^Q:1-366,H:1-366^89.34%ID^E:0^RecName: Full=Glutamine synthetase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF03951.16^Gln-synt_N^Glutamine synthetase, beta-Grasp domain^82-157^E:2.2e-10`PF00120.21^Gln-synt_C^Glutamine synthetase, catalytic domain^185-316^E:5e-12",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0004356^molecular_function^glutamate-ammonia ligase activity`GO:0006542^biological_process^glutamine biosynthetic process","GO:0004356^molecular_function^glutamate-ammonia ligase activity`GO:0006542^biological_process^glutamine biosynthetic process`GO:0006807^biological_process^nitrogen compound metabolic process",".","."]
["TRINITY_DN45422_c3_g16","leaves S. yangii","roots S. yangii",6.54503499351359,0,0,"TRINITY_DN45422_c3_g16_i2","TIP13_ARATH^TIP13_ARATH^Q:1005-250,H:1-252^75.79%ID^E:4e-126^RecName: Full=Aquaporin TIP1-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45422_c3_g16_i2.p1","247-1005[-]","TIP13_ARATH^TIP13_ARATH^Q:1-252,H:1-252^75.79%ID^E:4e-139^RecName: Full=Aquaporin TIP1-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^16-234^E:6.6e-75",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT4G01470`KO:K09873","GO:0042807^cellular_component^central vacuole`GO:0016021^cellular_component^integral component of membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0015254^molecular_function^glycerol channel activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0034220^biological_process^ion transmembrane transport`GO:0071918^biological_process^urea transmembrane transport`GO:0015840^biological_process^urea transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN43470_c3_g3","leaves S. yangii","roots S. yangii",6.53960172772875,0,0,"TRINITY_DN43470_c3_g3_i2","CYSEP_PHAVU^CYSEP_PHAVU^Q:886-269,H:138-343^61.17%ID^E:2e-85^RecName: Full=Vignain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus",".","TRINITY_DN43470_c3_g3_i2.p1","260-877[-]","CYSEP_PHAVU^CYSEP_PHAVU^Q:10-203,H:150-343^63.4%ID^E:3e-88^RecName: Full=Vignain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus","PF00112.20^Peptidase_C1^Papain family cysteine protease^10-204^E:6.4e-69`PF03051.12^Peptidase_C1_2^Peptidase C1-like family^145-185^E:1.3e-05",".",".",".",".","GO:0005788^cellular_component^endoplasmic reticulum lumen`GO:0008234^molecular_function^cysteine-type peptidase activity","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis`GO:0004197^molecular_function^cysteine-type endopeptidase activity",".","."]
["TRINITY_DN44449_c0_g1","leaves S. yangii","roots S. yangii",6.50833132600688,0,0,"TRINITY_DN44449_c0_g1_i5","STT7_ARATH^STT7_ARATH^Q:551-1756,H:161-562^82.34%ID^E:0^RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44449_c0_g1_i5.p1","605-1759[+]","STT7_ARATH^STT7_ARATH^Q:1-384,H:179-562^82.29%ID^E:0^RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^73-149^E:1.3e-17`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^76-149^E:6.9e-05",".",".","ENOG410XPP3^Cyclin-Dependent Kinase","KEGG:ath:AT1G68830","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0007623^biological_process^circadian rhythm`GO:0042548^biological_process^regulation of photosynthesis, light reaction","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46691_c4_g1","leaves S. yangii","roots S. yangii",6.47665360281363,0,0,"TRINITY_DN46691_c4_g1_i4","IN37_SPIOL^IN37_SPIOL^Q:1237-1698,H:191-344^85.71%ID^E:9e-76^RecName: Full=2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia`IN37_SPIOL^IN37_SPIOL^Q:154-741,H:1-194^69.5%ID^E:5e-62^RecName: Full=2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN46691_c4_g1_i4.p2","1213-1701[+]","IN37_SPIOL^IN37_SPIOL^Q:9-162,H:191-344^85.71%ID^E:1e-94^RecName: Full=2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".",".",".",".",".","GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0008168^molecular_function^methyltransferase activity`GO:0010189^biological_process^vitamin E biosynthetic process",".",".","."]
["TRINITY_DN44219_c0_g3","leaves S. yangii","roots S. yangii",6.45004866046864,0,0,"TRINITY_DN44219_c0_g3_i1","SGAT_ARATH^SGAT_ARATH^Q:1508-306,H:1-401^85.79%ID^E:0^RecName: Full=Serine--glyoxylate aminotransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44219_c0_g3_i1.p1","303-1508[-]","SGAT_ARATH^SGAT_ARATH^Q:1-401,H:1-401^85.79%ID^E:0^RecName: Full=Serine--glyoxylate aminotransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00266.16^Aminotran_5^Aminotransferase class-V^12-322^E:4.1e-32",".",".","COG0075^aminotransferase","KEGG:ath:AT2G13360`KO:K00830","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005777^cellular_component^peroxisome`GO:0005886^cellular_component^plasma membrane`GO:0008453^molecular_function^alanine-glyoxylate transaminase activity`GO:0050281^molecular_function^serine-glyoxylate transaminase activity`GO:0004760^molecular_function^serine-pyruvate transaminase activity`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN46258_c3_g1","leaves S. yangii","roots S. yangii",6.41992778647676,0,0,"TRINITY_DN46258_c3_g1_i2","U73C2_ARATH^U73C2_ARATH^Q:5870-4449,H:12-489^54.49%ID^E:6e-164^RecName: Full=UDP-glycosyltransferase 73C2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U73C2_ARATH^U73C2_ARATH^Q:3728-2352,H:13-488^48.53%ID^E:3e-140^RecName: Full=UDP-glycosyltransferase 73C2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U73C2_ARATH^U73C2_ARATH^Q:1635-1189,H:13-167^44.52%ID^E:7e-98^RecName: Full=UDP-glycosyltransferase 73C2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U73C2_ARATH^U73C2_ARATH^Q:1153-662,H:182-357^42.7%ID^E:7e-98^RecName: Full=UDP-glycosyltransferase 73C2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U73C2_ARATH^U73C2_ARATH^Q:671-279,H:355-488^48.15%ID^E:7e-98^RecName: Full=UDP-glycosyltransferase 73C2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46258_c3_g1_i2.p2","2313-3749[-]","U73C3_ARATH^U73C3_ARATH^Q:8-466,H:13-488^50%ID^E:2e-161^RecName: Full=UDP-glycosyltransferase 73C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^268-386^E:5.7e-20",".",".","COG1819^Transferase","KEGG:ath:AT2G36780`KO:K13496","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47486_c5_g8","leaves S. yangii","roots S. yangii",6.41789621412951,0,0,"TRINITY_DN47486_c5_g8_i1","PPO2_IPOBA^PPO2_IPOBA^Q:1-657,H:359-585^41.92%ID^E:1e-50^RecName: Full=Polyphenol oxidase II, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN47486_c5_g8_i1.p1","1-675[+]","PPO2_IPOBA^PPO2_IPOBA^Q:1-219,H:359-585^41.92%ID^E:3e-52^RecName: Full=Polyphenol oxidase II, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF00264.17^Tyrosinase^Common central domain of tyrosinase^1-20^E:6e-06`PF12142.5^PPO1_DWL^Polyphenol oxidase middle domain^29-79^E:2.1e-24`PF12143.5^PPO1_KFDV^Protein of unknown function (DUF_B2219)^101-218^E:5e-31",".",".",".",".","GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0004097^molecular_function^catechol oxidase activity`GO:0046872^molecular_function^metal ion binding`GO:0046148^biological_process^pigment biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process`GO:0004097^molecular_function^catechol oxidase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45683_c2_g5","leaves S. yangii","roots S. yangii",6.39879154341082,0,0,"TRINITY_DN45683_c2_g5_i1","C7A29_PANGI^C7A29_PANGI^Q:3-935,H:200-510^66.56%ID^E:6e-129^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN45683_c2_g5_i1.p1","3-959[+]","C7A29_PANGI^C7A29_PANGI^Q:1-318,H:200-517^66.98%ID^E:6e-155^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^1-294^E:8.1e-69",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45198_c3_g1","leaves S. yangii","roots S. yangii",6.36109007942977,0,0,"TRINITY_DN45198_c3_g1_i2","FTSH_TOBAC^FTSH_TOBAC^Q:2585-399,H:1-707^82.14%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45198_c3_g1_i2.p1","624-2597[-]","FTSH_TOBAC^FTSH_TOBAC^Q:5-630,H:1-635^87.11%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^285-416^E:3e-44`PF01434.15^Peptidase_M41^Peptidase family M41^478-629^E:3.4e-58",".",".",".",".","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division","GO:0005524^molecular_function^ATP binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN45047_c4_g1","leaves S. yangii","roots S. yangii",6.35040458791602,0,0,"TRINITY_DN45047_c4_g1_i2","HLIP_ARATH^HLIP_ARATH^Q:232-483,H:27-110^72.62%ID^E:4e-33^RecName: Full=High-light-induced protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45047_c4_g1_i2.p1","151-486[+]","HLIP_ARATH^HLIP_ARATH^Q:28-111,H:27-110^72.62%ID^E:8e-36^RecName: Full=High-light-induced protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YTYC^One helix protein","KEGG:ath:AT5G02120","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0007623^biological_process^circadian rhythm`GO:0015979^biological_process^photosynthesis`GO:0018298^biological_process^protein-chromophore linkage`GO:0009644^biological_process^response to high light intensity",".",".","."]
["TRINITY_DN41152_c0_g2","leaves S. yangii","roots S. yangii",6.33939205129362,0,0,"TRINITY_DN41152_c0_g2_i2","SPS2_ARATH^SPS2_ARATH^Q:1598-351,H:4-416^68.11%ID^E:0^RecName: Full=Solanesyl diphosphate synthase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41152_c0_g2_i2.p1","345-1610[-]","SPS2_ARATH^SPS2_ARATH^Q:2-420,H:1-416^67.86%ID^E:0^RecName: Full=Solanesyl diphosphate synthase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00348.14^polyprenyl_synt^Polyprenyl synthetase^127-372^E:1.9e-73",".",".","COG0142^synthase","KEGG:ath:AT1G17050`KO:K05356","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0052924^molecular_function^all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity`GO:0046872^molecular_function^metal ion binding`GO:0050347^molecular_function^trans-octaprenyltranstransferase activity`GO:0008299^biological_process^isoprenoid biosynthetic process`GO:0015979^biological_process^photosynthesis`GO:0010236^biological_process^plastoquinone biosynthetic process","GO:0008299^biological_process^isoprenoid biosynthetic process",".","."]
["TRINITY_DN46991_c2_g4","leaves S. yangii","roots S. yangii",6.31026819316203,0,0,"TRINITY_DN46991_c2_g4_i2","C7A29_PANGI^C7A29_PANGI^Q:218-904,H:1-229^54.35%ID^E:1e-81^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN46991_c2_g4_i2.p1","218-904[+]","C7A29_PANGI^C7A29_PANGI^Q:1-229,H:1-229^54.35%ID^E:1e-82^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^81-219^E:1.8e-16",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44195_c0_g1","leaves S. yangii","roots S. yangii",6.29443926214396,0,0,"TRINITY_DN44195_c0_g1_i8","KAD5_ARATH^KAD5_ARATH^Q:279-1844,H:78-587^72.03%ID^E:0^RecName: Full=Adenylate kinase 5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44195_c0_g1_i8.p1","69-1847[+]","KAD5_ARATH^KAD5_ARATH^Q:71-592,H:78-587^72.03%ID^E:0^RecName: Full=Adenylate kinase 5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00406.19^ADK^Adenylate kinase^77-253^E:9.9e-49`PF13207.3^AAA_17^AAA domain^79-197^E:5.4e-25`PF09353.7^DUF1995^Domain of unknown function (DUF1995)^325-567^E:8.8e-39",".",".","COG0563^Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0004017^molecular_function^adenylate kinase activity`GO:0005524^molecular_function^ATP binding`GO:0046939^biological_process^nucleotide phosphorylation",".",".","."]
["TRINITY_DN37545_c0_g1","leaves S. yangii","roots S. yangii",6.27668123273635,0,0,"TRINITY_DN37545_c0_g1_i1","STEP2_ARATH^STEP2_ARATH^Q:376-855,H:37-202^58.33%ID^E:1e-43^RecName: Full=Stress enhanced protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37545_c0_g1_i1.p1","310-858[+]","STEP2_ARATH^STEP2_ARATH^Q:28-182,H:42-202^58.9%ID^E:2e-57^RecName: Full=Stress enhanced protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YH9Q^Stress enhanced protein 2","KEGG:ath:AT2G21970","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0071486^biological_process^cellular response to high light intensity`GO:0071492^biological_process^cellular response to UV-A`GO:0009765^biological_process^photosynthesis, light harvesting`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN38592_c0_g1","leaves S. yangii","roots S. yangii",6.26043662200253,0,0,"TRINITY_DN38592_c0_g1_i1","PGKH_TOBAC^PGKH_TOBAC^Q:1705-296,H:1-474^87.34%ID^E:0^RecName: Full=Phosphoglycerate kinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN38592_c0_g1_i1.p1","275-1705[-]","PGKH_TOBAC^PGKH_TOBAC^Q:1-476,H:1-481^87.11%ID^E:0^RecName: Full=Phosphoglycerate kinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00162.16^PGK^Phosphoglycerate kinase^82-460^E:4.6e-161",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0004618^molecular_function^phosphoglycerate kinase activity`GO:0006096^biological_process^glycolytic process`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0004618^molecular_function^phosphoglycerate kinase activity`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN38444_c0_g1","leaves S. yangii","roots S. yangii",6.24219452252889,0,0,"TRINITY_DN38444_c0_g1_i3","STN8_ARATH^STN8_ARATH^Q:178-1338,H:1-387^59.85%ID^E:5e-137^RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`STN8_ARATH^STN8_ARATH^Q:1358-1720,H:373-493^79.34%ID^E:5e-53^RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38444_c0_g1_i3.p3","1367-1732[+]","STN8_ARATH^STN8_ARATH^Q:2-118,H:377-493^81.2%ID^E:5e-59^RecName: Full=Serine/threonine-protein kinase STN8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XPP3^Cyclin-Dependent Kinase","KEGG:ath:AT5G01920","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009579^cellular_component^thylakoid`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0042549^biological_process^photosystem II stabilization",".",".","."]
["TRINITY_DN44581_c0_g1","leaves S. yangii","roots S. yangii",6.20781734043844,"0.00138589709666275","0.00194706787985492","TRINITY_DN44581_c0_g1_i1","NAC90_ARATH^NAC90_ARATH^Q:893-378,H:55-232^47.8%ID^E:4e-44^RecName: Full=NAC domain-containing protein 90;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44581_c0_g1_i1.p1","348-839[-]","NAC90_ARATH^NAC90_ARATH^Q:2-154,H:74-232^46.01%ID^E:6e-38^RecName: Full=NAC domain-containing protein 90;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^9-65^E:6.2e-08",".",".","ENOG410YGJ5^NAC domain-containing protein","KEGG:ath:AT5G22380","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN38488_c0_g1","leaves S. yangii","roots S. yangii",6.20574287611448,0,0,"TRINITY_DN38488_c0_g1_i1","TL17_ARATH^TL17_ARATH^Q:1120-617,H:1-164^57.65%ID^E:8e-58^RecName: Full=Thylakoid lumenal 17.4 kDa protein, chloroplastic {ECO:0000303|PubMed:9654141};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TL17_ARATH^TL17_ARATH^Q:629-342,H:141-236^60.42%ID^E:1e-28^RecName: Full=Thylakoid lumenal 17.4 kDa protein, chloroplastic {ECO:0000303|PubMed:9654141};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38488_c0_g1_i1.p1","527-1120[-]","TL17_ARATH^TL17_ARATH^Q:38-168,H:32-164^69.17%ID^E:7e-61^RecName: Full=Thylakoid lumenal 17.4 kDa protein, chloroplastic {ECO:0000303|PubMed:9654141};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00805.19^Pentapeptide^Pentapeptide repeats (8 copies)^128-167^E:6.3e-05",".",".",".",".","GO:0009543^cellular_component^chloroplast thylakoid lumen",".",".","."]
["TRINITY_DN45426_c6_g3","leaves S. yangii","roots S. yangii",6.19454345935287,0,0,"TRINITY_DN45426_c6_g3_i1","C71A6_NEPRA^C71A6_NEPRA^Q:705-301,H:375-509^76.3%ID^E:2e-69^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta",".","TRINITY_DN45426_c6_g3_i1.p1","298-705[-]","C71A6_NEPRA^C71A6_NEPRA^Q:1-135,H:375-509^76.3%ID^E:4e-71^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta","PF00067.19^p450^Cytochrome P450^1-120^E:1.7e-32",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43941_c1_g1","leaves S. yangii","roots S. yangii",6.08440444635955,0,0,"TRINITY_DN43941_c1_g1_i2","C7A12_PANGI^C7A12_PANGI^Q:219-1451,H:34-446^44.26%ID^E:1e-121^RecName: Full=Cytochrome P450 CYP736A12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN43941_c1_g1_i2.p1","138-1451[+]","C7A12_PANGI^C7A12_PANGI^Q:21-438,H:27-446^44.24%ID^E:3e-124^RecName: Full=Cytochrome P450 CYP736A12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^28-437^E:1.1e-94","sigP:1^22^0.706^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44217_c0_g1","leaves S. yangii","roots S. yangii",6.08252269270564,0,0,"TRINITY_DN44217_c0_g1_i4","RECAC_ARATH^RECAC_ARATH^Q:3-1052,H:77-408^84.29%ID^E:0^RecName: Full=DNA repair protein recA homolog 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44217_c0_g1_i4.p1","99-1130[+]","RECAC_ARATH^RECAC_ARATH^Q:1-318,H:91-408^88.99%ID^E:0^RecName: Full=DNA repair protein recA homolog 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00154.18^RecA^recA bacterial DNA recombination protein^1-257^E:6.7e-116`PF06745.10^ATPase^KaiC^28-100^E:4e-06`PF08423.8^Rad51^Rad51^29-212^E:1.1e-07",".",".","COG0468^Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (By similarity)",".","GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0008094^molecular_function^DNA-dependent ATPase activity`GO:0003690^molecular_function^double-stranded DNA binding`GO:0000400^molecular_function^four-way junction DNA binding`GO:0000150^molecular_function^recombinase activity`GO:0003697^molecular_function^single-stranded DNA binding`GO:0006974^biological_process^cellular response to DNA damage stimulus`GO:0000730^biological_process^DNA recombinase assembly`GO:0006312^biological_process^mitotic recombination`GO:0010212^biological_process^response to ionizing radiation`GO:0042148^biological_process^strand invasion","GO:0003697^molecular_function^single-stranded DNA binding`GO:0005524^molecular_function^ATP binding`GO:0006281^biological_process^DNA repair`GO:0009432^biological_process^SOS response",".","."]
["TRINITY_DN44649_c2_g6","leaves S. yangii","roots S. yangii",6.0574230304867,0,0,"TRINITY_DN44649_c2_g6_i11","ALFC2_ARATH^ALFC2_ARATH^Q:3406-2219,H:1-398^85.43%ID^E:0^RecName: Full=Probable fructose-bisphosphate aldolase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44649_c2_g6_i11.p1","39-1667[+]","EDA2_ARATH^EDA2_ARATH^Q:66-535,H:15-482^61.73%ID^E:0^RecName: Full=Probable serine protease EDA2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05577.9^Peptidase_S28^Serine carboxypeptidase S28^107-496^E:7.1e-80",".",".","ENOG410XSGG^protease, serine, 16 (thymus)","KEGG:ath:AT2G18080","GO:0005576^cellular_component^extracellular region`GO:0008239^molecular_function^dipeptidyl-peptidase activity`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0009561^biological_process^megagametogenesis`GO:0006508^biological_process^proteolysis","GO:0008236^molecular_function^serine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN60562_c0_g1","leaves S. yangii","roots S. yangii",6.00499907127079,0,0,"TRINITY_DN60562_c0_g1_i1","LPA2_ARATH^LPA2_ARATH^Q:975-418,H:1-184^47.64%ID^E:2e-30^RecName: Full=Protein LOW PSII ACCUMULATION 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN60562_c0_g1_i1.p1","412-975[-]","LPA2_ARATH^LPA2_ARATH^Q:1-186,H:1-184^48.69%ID^E:4e-47^RecName: Full=Protein LOW PSII ACCUMULATION 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YS92^NA","KEGG:ath:AT5G51545","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0042651^cellular_component^thylakoid membrane`GO:0010207^biological_process^photosystem II assembly",".",".","."]
["TRINITY_DN43821_c3_g3","leaves S. yangii","roots S. yangii",5.97675625132808,0,0,"TRINITY_DN43821_c3_g3_i5","CAS1_MALDO^CAS1_MALDO^Q:376-1476,H:1-374^80.48%ID^E:0^RecName: Full=L-3-cyanoalanine synthase 1, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus",".","TRINITY_DN43821_c3_g3_i5.p1","376-1479[+]","CAS1_MALDO^CAS1_MALDO^Q:1-367,H:1-374^80.48%ID^E:0^RecName: Full=L-3-cyanoalanine synthase 1, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus","PF00291.22^PALP^Pyridoxal-phosphate dependent enzyme^53-339^E:4.2e-68",".",".",".","KEGG:mdm:103401891`KO:K13034","GO:0005739^cellular_component^mitochondrion`GO:0004124^molecular_function^cysteine synthase activity`GO:0050017^molecular_function^L-3-cyanoalanine synthase activity`GO:0016740^molecular_function^transferase activity`GO:0019499^biological_process^cyanide metabolic process`GO:0006535^biological_process^cysteine biosynthetic process from serine`GO:0009836^biological_process^fruit ripening, climacteric`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN45519_c0_g1","leaves S. yangii","roots S. yangii",5.97188348050485,0,0,"TRINITY_DN45519_c0_g1_i2","BAM3_ARATH^BAM3_ARATH^Q:1804-818,H:249-548^69%ID^E:1e-152^RecName: Full=Beta-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BAM3_ARATH^BAM3_ARATH^Q:3464-2730,H:1-244^70.2%ID^E:1e-108^RecName: Full=Beta-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45519_c0_g1_i2.p1","815-1603[-]","BAM3_ARATH^BAM3_ARATH^Q:1-262,H:287-548^72.52%ID^E:1e-137^RecName: Full=Beta-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01373.14^Glyco_hydro_14^Glycosyl hydrolase family 14^11-220^E:8e-73",".",".","ENOG410XRH5^beta-amylase","KEGG:ath:AT4G17090`KO:K01177","GO:0009570^cellular_component^chloroplast stroma`GO:0016161^molecular_function^beta-amylase activity`GO:0000024^biological_process^maltose biosynthetic process`GO:0009409^biological_process^response to cold`GO:0005983^biological_process^starch catabolic process","GO:0016161^molecular_function^beta-amylase activity`GO:0000272^biological_process^polysaccharide catabolic process",".","."]
["TRINITY_DN43726_c0_g2","leaves S. yangii","roots S. yangii",5.9718336802497,0,0,"TRINITY_DN43726_c0_g2_i1","ABA2_NICPL^ABA2_NICPL^Q:1493-12,H:1-500^77.73%ID^E:0^RecName: Full=Zeaxanthin epoxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43726_c0_g2_i1.p1","3-1493[-]","ABA2_NICPL^ABA2_NICPL^Q:1-494,H:1-500^77.73%ID^E:0^RecName: Full=Zeaxanthin epoxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01494.16^FAD_binding_3^FAD binding domain^75-246^E:1.8e-06`PF01494.16^FAD_binding_3^FAD binding domain^356-396^E:2e-06",".",".",".",".","GO:0031969^cellular_component^chloroplast membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0052663^molecular_function^antheraxanthin epoxidase activity`GO:0071949^molecular_function^FAD binding`GO:0009540^molecular_function^zeaxanthin epoxidase [overall] activity`GO:0052662^molecular_function^zeaxanthin epoxidase activity`GO:0009688^biological_process^abscisic acid biosynthetic process","GO:0071949^molecular_function^FAD binding",".","."]
["TRINITY_DN45444_c0_g1","leaves S. yangii","roots S. yangii",5.95154044619426,0,0,"TRINITY_DN45444_c0_g1_i7","LPA3_ARATH^LPA3_ARATH^Q:941-486,H:207-358^81.58%ID^E:2e-68^RecName: Full=Protein LOW PSII ACCUMULATION 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LPA3_ARATH^LPA3_ARATH^Q:2739-2407,H:35-145^70.27%ID^E:9e-36^RecName: Full=Protein LOW PSII ACCUMULATION 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LPA3_ARATH^LPA3_ARATH^Q:1769-1551,H:138-210^58.9%ID^E:3e-22^RecName: Full=Protein LOW PSII ACCUMULATION 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45444_c0_g1_i7.p1","2371-2919[-]","LPA3_ARATH^LPA3_ARATH^Q:61-171,H:35-145^70.27%ID^E:1e-40^RecName: Full=Protein LOW PSII ACCUMULATION 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF09353.7^DUF1995^Domain of unknown function (DUF1995)^78-167^E:1.6e-14",".",".","ENOG410XSNM^Domain of unknown function (DUF1995)","KEGG:ath:AT1G73060","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009571^cellular_component^proplastid stroma`GO:0010207^biological_process^photosystem II assembly`GO:0009735^biological_process^response to cytokinin",".",".","."]
["TRINITY_DN46750_c2_g2","leaves S. yangii","roots S. yangii",5.95145588424552,"0.00137423224834803","0.00193122032167892","TRINITY_DN46750_c2_g2_i1","OFP11_ARATH^OFP11_ARATH^Q:415-651,H:97-176^55%ID^E:9e-19^RecName: Full=Transcription repressor OFP11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46750_c2_g2_i1.p1","157-714[+]","OFP12_ARATH^OFP12_ARATH^Q:50-161,H:107-220^51.75%ID^E:1e-27^RecName: Full=Transcription repressor OFP12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04844.10^Ovate^Transcriptional repressor, ovate^99-159^E:1.3e-24",".",".","ENOG410YWPI^Pfam:DUF623","KEGG:ath:AT1G05420","GO:0005634^cellular_component^nucleus`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46859_c4_g1","leaves S. yangii","roots S. yangii",5.91655615592924,0,0,"TRINITY_DN46859_c4_g1_i10","GAT22_ARATH^GAT22_ARATH^Q:788-276,H:149-352^40.98%ID^E:3e-23^RecName: Full=Putative GATA transcription factor 22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46859_c4_g1_i10.p1","273-1088[-]","GAT22_ARATH^GAT22_ARATH^Q:101-271,H:149-352^41.95%ID^E:3e-29^RecName: Full=Putative GATA transcription factor 22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00320.24^GATA^GATA zinc finger^147-180^E:3.8e-17",".",".","COG5641^Transcription factor","KEGG:ath:AT4G26150","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003682^molecular_function^chromatin binding`GO:0000977^molecular_function^RNA polymerase II regulatory region sequence-specific DNA binding`GO:0001085^molecular_function^RNA polymerase II transcription factor binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0001228^molecular_function^transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding`GO:0008270^molecular_function^zinc ion binding`GO:0030154^biological_process^cell differentiation`GO:0007623^biological_process^circadian rhythm`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0009910^biological_process^negative regulation of flower development`GO:0010187^biological_process^negative regulation of seed germination`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0010380^biological_process^regulation of chlorophyll biosynthetic process`GO:0010468^biological_process^regulation of gene expression`GO:0009735^biological_process^response to cytokinin`GO:0009416^biological_process^response to light stimulus`GO:0006366^biological_process^transcription from RNA polymerase II promoter","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45041_c4_g3","leaves S. yangii","roots S. yangii",5.90910958254538,0,0,"TRINITY_DN45041_c4_g3_i9","RBL9_ARATH^RBL9_ARATH^Q:1561-1235,H:241-349^61.47%ID^E:1e-54^RecName: Full=RHOMBOID-like protein 9, chloroplastic {ECO:0000303|PubMed:17181860};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RBL9_ARATH^RBL9_ARATH^Q:2153-1581,H:53-240^36.95%ID^E:1e-54^RecName: Full=RHOMBOID-like protein 9, chloroplastic {ECO:0000303|PubMed:17181860};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45041_c4_g3_i9.p1","1569-2360[-]","RBL9_ARATH^RBL9_ARATH^Q:70-260,H:53-240^36.95%ID^E:6e-21^RecName: Full=RHOMBOID-like protein 9, chloroplastic {ECO:0000303|PubMed:17181860};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0705^rhomboid family","KEGG:ath:AT5G38510","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0004252^molecular_function^serine-type endopeptidase activity",".",".","."]
["TRINITY_DN44106_c1_g1","leaves S. yangii","roots S. yangii",5.87819138146971,0,0,"TRINITY_DN44106_c1_g1_i4","CP29B_ARATH^CP29B_ARATH^Q:161-793,H:44-267^65.18%ID^E:4e-84^RecName: Full=RNA-binding protein CP29B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CP29B_ARATH^CP29B_ARATH^Q:305-547,H:205-286^42.68%ID^E:4e-12^RecName: Full=RNA-binding protein CP29B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44106_c1_g1_i4.p1","41-847[+]","CP29B_ARATH^CP29B_ARATH^Q:41-251,H:44-267^65.18%ID^E:3e-92^RecName: Full=RNA-binding protein CP29B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CP29B_ARATH^CP29B_ARATH^Q:89-169,H:205-286^42.68%ID^E:3e-13^RecName: Full=RNA-binding protein CP29B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^90-160^E:1.4e-19`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^98-161^E:0.057`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^190-252^E:1.9e-16",".",".","ENOG4111MZ2^Ribonucleoprotein","KEGG:ath:AT2G37220`KO:K11294","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0010319^cellular_component^stromule`GO:0009579^cellular_component^thylakoid`GO:0000166^molecular_function^nucleotide binding`GO:0008266^molecular_function^poly(U) RNA binding`GO:0045087^biological_process^innate immune response`GO:0006397^biological_process^mRNA processing`GO:0009737^biological_process^response to abscisic acid`GO:0009409^biological_process^response to cold","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN47283_c0_g1","leaves S. yangii","roots S. yangii",5.86420500130217,0,0,"TRINITY_DN47283_c0_g1_i2","C83B1_ARATH^C83B1_ARATH^Q:288-1148,H:39-303^40%ID^E:1e-65^RecName: Full=Cytochrome P450 83B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47283_c0_g1_i2.p1","174-1058[+]","C83B1_ARATH^C83B1_ARATH^Q:1-292,H:1-294^41.36%ID^E:3e-78^RecName: Full=Cytochrome P450 83B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^30-292^E:1.1e-33","sigP:1^17^0.724^YES",".","COG2124^Cytochrome p450","KEGG:ath:AT4G31500`KO:K11818","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0048830^biological_process^adventitious root development`GO:0052544^biological_process^defense response by callose deposition in cell wall`GO:0042742^biological_process^defense response to bacterium`GO:0009759^biological_process^indole glucosinolate biosynthetic process`GO:0009684^biological_process^indoleacetic acid biosynthetic process`GO:0009682^biological_process^induced systemic resistance`GO:0040008^biological_process^regulation of growth`GO:0010114^biological_process^response to red light`GO:0009641^biological_process^shade avoidance`GO:0000162^biological_process^tryptophan biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47128_c1_g1","leaves S. yangii","roots S. yangii",5.85551487581987,0,0,"TRINITY_DN47128_c1_g1_i16","P2B15_ARATH^P2B15_ARATH^Q:630-163,H:71-249^35.2%ID^E:1e-28^RecName: Full=F-box protein PP2-B15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47128_c1_g1_i16.p1","55-552[-]","P2B15_ARATH^P2B15_ARATH^Q:1-161,H:97-284^38.3%ID^E:3e-36^RecName: Full=F-box protein PP2-B15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14299.3^PP2^Phloem protein 2^1-156^E:3.4e-41",".",".","ENOG4111AE6^F-box protein","KEGG:ath:AT1G09155","GO:0030246^molecular_function^carbohydrate binding",".",".","."]
["TRINITY_DN47283_c0_g4","leaves S. yangii","roots S. yangii",5.81449545138072,0,0,"TRINITY_DN47283_c0_g4_i1","C83B1_ARATH^C83B1_ARATH^Q:566-1882,H:53-499^44.3%ID^E:5e-118^RecName: Full=Cytochrome P450 83B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47283_c0_g4_i1.p1","401-1888[+]","C83B1_ARATH^C83B1_ARATH^Q:31-494,H:29-499^45.34%ID^E:4e-143^RecName: Full=Cytochrome P450 83B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^32-487^E:5.9e-98","sigP:1^20^0.65^YES",".","COG2124^Cytochrome p450","KEGG:ath:AT4G31500`KO:K11818","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0048830^biological_process^adventitious root development`GO:0052544^biological_process^defense response by callose deposition in cell wall`GO:0042742^biological_process^defense response to bacterium`GO:0009759^biological_process^indole glucosinolate biosynthetic process`GO:0009684^biological_process^indoleacetic acid biosynthetic process`GO:0009682^biological_process^induced systemic resistance`GO:0040008^biological_process^regulation of growth`GO:0010114^biological_process^response to red light`GO:0009641^biological_process^shade avoidance`GO:0000162^biological_process^tryptophan biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46357_c0_g1","leaves S. yangii","roots S. yangii",5.79131225307791,0,0,"TRINITY_DN46357_c0_g1_i4","GCSP_SOLTU^GCSP_SOLTU^Q:427-3282,H:1-949^85.97%ID^E:0^RecName: Full=Glycine dehydrogenase (decarboxylating), mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`GCSP_SOLTU^GCSP_SOLTU^Q:3311-3613,H:933-1006^59.41%ID^E:2e-27^RecName: Full=Glycine dehydrogenase (decarboxylating), mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46357_c0_g1_i4.p1","427-3318[+]","GCSP_SOLTU^GCSP_SOLTU^Q:1-952,H:1-949^86.09%ID^E:0^RecName: Full=Glycine dehydrogenase (decarboxylating), mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF02347.13^GDC-P^Glycine cleavage system P-protein^82-508^E:5.7e-185`PF02347.13^GDC-P^Glycine cleavage system P-protein^520-801^E:3.7e-11",".",".","COG0403^The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor`COG1003^The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor",".","GO:0005739^cellular_component^mitochondrion`GO:0004375^molecular_function^glycine dehydrogenase (decarboxylating) activity`GO:0006546^biological_process^glycine catabolic process","GO:0004375^molecular_function^glycine dehydrogenase (decarboxylating) activity`GO:0006546^biological_process^glycine catabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44286_c1_g2","leaves S. yangii","roots S. yangii",5.76437852284688,0,0,"TRINITY_DN44286_c1_g2_i2","FTRC2_SPIOL^FTRC2_SPIOL^Q:983-642,H:1-114^74.56%ID^E:9e-47^RecName: Full=Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN44286_c1_g2_i2.p1","639-983[-]","FTRC1_SPIOL^FTRC1_SPIOL^Q:1-114,H:1-110^73.68%ID^E:6e-54^RecName: Full=Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF02943.12^FeThRed_B^Ferredoxin thioredoxin reductase catalytic beta chain^43-114^E:1.6e-28",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0030385^molecular_function^ferredoxin:thioredoxin reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process","GO:0016730^molecular_function^oxidoreductase activity, acting on iron-sulfur proteins as donors`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46386_c0_g3","leaves S. yangii","roots S. yangii",5.70947617240075,"0.0127617392510329","0.0166045524805019","TRINITY_DN46386_c0_g3_i1","Y4885_ARATH^Y4885_ARATH^Q:2-325,H:205-312^45.37%ID^E:6e-15^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:5-319,H:158-262^41.9%ID^E:5e-13^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:5-328,H:134-241^39.81%ID^E:3e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:5-325,H:278-384^39.25%ID^E:2e-09^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-307,H:301-402^38.24%ID^E:2e-09^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:5-328,H:494-601^35.19%ID^E:1e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-325,H:373-480^31.48%ID^E:3e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:32-307,H:455-546^38.04%ID^E:6e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46386_c0_g3_i1.p1","2-328[+]","Y4885_ARATH^Y4885_ARATH^Q:1-108,H:205-312^45.37%ID^E:2e-19^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-106,H:158-262^41.9%ID^E:5e-19^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-109,H:254-361^39.81%ID^E:2e-17^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-109,H:134-241^39.81%ID^E:4e-15^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-108,H:182-288^42.06%ID^E:7e-15^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-108,H:278-384^39.25%ID^E:1e-14^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:1-102,H:301-402^38.24%ID^E:7e-14^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:12-108,H:120-216^41.24%ID^E:3e-13^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-108,H:326-432^36.45%ID^E:5e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-109,H:494-601^35.19%ID^E:3e-11^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:11-102,H:455-546^38.04%ID^E:1e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:1-103,H:349-451^33.98%ID^E:3e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:17-108,H:485-576^35.87%ID^E:8e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-108,H:542-648^33.64%ID^E:1e-09^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:1-105,H:373-525^28.1%ID^E:2e-09^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4885_ARATH^Y4885_ARATH^Q:2-109,H:518-625^34.26%ID^E:1e-08^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G08850","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity",".",".","."]
["TRINITY_DN46616_c1_g3","leaves S. yangii","roots S. yangii",5.70698427026992,0,0,"TRINITY_DN46616_c1_g3_i3","GAUT6_ARATH^GAUT6_ARATH^Q:1181-2551,H:134-589^58.21%ID^E:0^RecName: Full=Probable galacturonosyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46616_c1_g3_i3.p1","995-2554[+]","GAUT6_ARATH^GAUT6_ARATH^Q:63-519,H:134-589^58.21%ID^E:0^RecName: Full=Probable galacturonosyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01501.17^Glyco_transf_8^Glycosyl transferase family 8^199-492^E:3.5e-72","sigP:1^20^0.482^YES",".","ENOG410YA0P^Galacturonosyltransferase",".","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0047262^molecular_function^polygalacturonate 4-alpha-galacturonosyltransferase activity`GO:0071555^biological_process^cell wall organization`GO:0045489^biological_process^pectin biosynthetic process","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN47103_c0_g1","leaves S. yangii","roots S. yangii",5.67637824654963,0,0,"TRINITY_DN47103_c0_g1_i4","HEX6_RICCO^HEX6_RICCO^Q:463-2,H:151-306^77.56%ID^E:9e-78^RecName: Full=Hexose carrier protein HEX6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN47103_c0_g1_i4.p1","2-436[-]","HEX6_RICCO^HEX6_RICCO^Q:1-145,H:160-306^76.19%ID^E:4e-73^RecName: Full=Hexose carrier protein HEX6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus","PF00083.21^Sugar_tr^Sugar (and other) transporter^1-145^E:5.6e-35",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0022891^molecular_function^substrate-specific transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0008643^biological_process^carbohydrate transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46057_c4_g2","leaves S. yangii","roots S. yangii",5.66347220917705,0,0,"TRINITY_DN46057_c4_g2_i2","CPY28_ARATH^CPY28_ARATH^Q:1040-522,H:38-213^63.84%ID^E:2e-57^RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46057_c4_g2_i2.p1","501-1214[-]","CPY28_ARATH^CPY28_ARATH^Q:30-231,H:12-213^60.19%ID^E:2e-61^RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^96-232^E:3.6e-14",".",".","COG0652^peptidyl-prolyl cis-trans isomerase activity","KEGG:ath:AT5G35100`KO:K03768","GO:0009507^cellular_component^chloroplast`GO:0031977^cellular_component^thylakoid lumen`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN47747_c0_g2","leaves S. yangii","roots S. yangii",5.65682361331861,0,0,"TRINITY_DN47747_c0_g2_i2","GSO1_ARATH^GSO1_ARATH^Q:7-510,H:224-385^30.64%ID^E:3e-17^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-486,H:439-640^30.2%ID^E:3e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-504,H:630-815^29.1%ID^E:6e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-495,H:343-524^28.57%ID^E:1e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:10-504,H:129-310^26.37%ID^E:2e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-504,H:270-431^30.29%ID^E:1e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-504,H:102-262^28.81%ID^E:2e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-267,H:750-839^32.22%ID^E:3e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:10-504,H:585-742^24.85%ID^E:8e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47747_c0_g2_i2.p1","1-510[+]","GSO1_ARATH^GSO1_ARATH^Q:3-170,H:224-385^30.64%ID^E:3e-17^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-162,H:439-640^30.2%ID^E:3e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-168,H:630-815^29.1%ID^E:5e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-165,H:343-524^28.57%ID^E:1e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:4-168,H:129-310^26.37%ID^E:2e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-168,H:270-431^30.29%ID^E:1e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-168,H:102-262^28.81%ID^E:2e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1-89,H:750-839^32.22%ID^E:2e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:4-168,H:585-742^24.85%ID^E:7e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^69-89^E:0.65",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT4G20140","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0090558^biological_process^plant epidermis development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45086_c3_g1","leaves S. yangii","roots S. yangii",5.58099578035101,0,0,"TRINITY_DN45086_c3_g1_i3","CAF2P_ARATH^CAF2P_ARATH^Q:1993-1127,H:65-348^59.8%ID^E:2e-108^RecName: Full=CRS2-associated factor 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CAF2P_ARATH^CAF2P_ARATH^Q:956-495,H:342-505^59.76%ID^E:3e-49^RecName: Full=CRS2-associated factor 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45086_c3_g1_i3.p2","303-776[-]","CAF2P_MAIZE^CAF2P_MAIZE^Q:1-143,H:433-602^38.73%ID^E:2e-20^RecName: Full=CRS2-associated factor 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".",".",".","ENOG410XQZ0^CRS2-associated factor","KEGG:zma:542682","GO:0009570^cellular_component^chloroplast stroma`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0003723^molecular_function^RNA binding`GO:0000373^biological_process^Group II intron splicing`GO:0006397^biological_process^mRNA processing",".",".","."]
["TRINITY_DN46824_c3_g2","leaves S. yangii","roots S. yangii",5.57377721562626,0,0,"TRINITY_DN46824_c3_g2_i16","CTPA3_ARATH^CTPA3_ARATH^Q:207-1655,H:30-519^69.35%ID^E:0^RecName: Full=Carboxyl-terminal-processing peptidase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46824_c3_g2_i16.p1","114-1658[+]","CTPA3_ARATH^CTPA3_ARATH^Q:19-514,H:19-519^68.96%ID^E:0^RecName: Full=Carboxyl-terminal-processing peptidase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00595.21^PDZ^PDZ domain (Also known as DHR or GLGF)^193-264^E:1.6e-09`PF13180.3^PDZ_2^PDZ domain^205-264^E:3.2e-07`PF03572.15^Peptidase_S41^Peptidase family S41^306-468^E:7.6e-47",".",".","COG0793^protease","KEGG:ath:AT3G57680","GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0008236^molecular_function^serine-type peptidase activity","GO:0005515^molecular_function^protein binding`GO:0008236^molecular_function^serine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46620_c1_g1","leaves S. yangii","roots S. yangii",5.56895123828353,"0.00269990121309763","0.00371493617215297","TRINITY_DN46620_c1_g1_i8","CP19B_ARATH^CP19B_ARATH^Q:596-198,H:40-172^81.2%ID^E:2e-64^RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46620_c1_g1_i8.p1","195-596[-]","CP19B_ARATH^CP19B_ARATH^Q:1-133,H:40-172^81.2%ID^E:3e-76^RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^16-131^E:3.8e-39",".",".","COG0652^peptidyl-prolyl cis-trans isomerase activity","KEGG:ath:AT2G21130`KO:K01802","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN44751_c8_g2","leaves S. yangii","roots S. yangii",5.56742615683002,0,0,"TRINITY_DN44751_c8_g2_i9","Y5224_ARATH^Y5224_ARATH^Q:667-386,H:150-249^34%ID^E:2e-06^RecName: Full=Uncharacterized protein At5g02240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44751_c8_g2_i9.p1","326-2110[-]","Y5224_ARATH^Y5224_ARATH^Q:482-575,H:150-249^34%ID^E:8e-07^RecName: Full=Uncharacterized protein At5g02240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05368.10^NmrA^NmrA-like family^161-232^E:7.9e-10`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^161-260^E:3.4e-05`PF13460.3^NAD_binding_10^NAD(P)H-binding^165-241^E:2.2e-11`PF08547.9^CIA30^Complex I intermediate-associated protein 30 (CIA30)^306-408^E:7.3e-08`PF13460.3^NAD_binding_10^NAD(P)H-binding^464-546^E:4.7e-12",".",".","COG0702^epimerase dehydratase","KEGG:ath:AT5G02240","GO:0048046^cellular_component^apoplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0009737^biological_process^response to abscisic acid","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding",".","."]
["TRINITY_DN44399_c0_g1","leaves S. yangii","roots S. yangii",5.53892880879734,0,0,"TRINITY_DN44399_c0_g1_i4","ROC3_NICSY^ROC3_NICSY^Q:1570-1920,H:157-273^76.07%ID^E:2e-54^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC3_NICSY^ROC3_NICSY^Q:467-682,H:90-161^77.78%ID^E:5e-29^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC3_NICSY^ROC3_NICSY^Q:1663-1926,H:92-187^45.83%ID^E:4e-14^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC3_NICSY^ROC3_NICSY^Q:491-679,H:192-254^41.27%ID^E:7e-10^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44399_c0_g1_i4.p1","170-727[+]","CP31B_ARATH^CP31B_ARATH^Q:32-171,H:43-177^56.94%ID^E:1e-40^RecName: Full=RNA-binding protein CP31B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CP31B_ARATH^CP31B_ARATH^Q:108-170,H:208-270^42.86%ID^E:5e-11^RecName: Full=RNA-binding protein CP31B, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^109-171^E:8.2e-19","sigP:1^17^0.509^YES",".","ENOG4111FDY^Rna-binding protein","KEGG:ath:AT5G50250","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0008266^molecular_function^poly(U) RNA binding`GO:0045087^biological_process^innate immune response`GO:0006397^biological_process^mRNA processing`GO:0009451^biological_process^RNA modification","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN44264_c1_g2","leaves S. yangii","roots S. yangii",5.51758594085362,0,0,"TRINITY_DN44264_c1_g2_i3","CB13_SOLLC^CB13_SOLLC^Q:3759-2941,H:1-273^90.51%ID^E:5e-132^RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44264_c1_g2_i3.p1","216-1700[+]","FPA_ARATH^FPA_ARATH^Q:345-456,H:441-554^56.14%ID^E:7e-32^RecName: Full=Flowering time control protein FPA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FPA_ARATH^FPA_ARATH^Q:20-167,H:201-333^32.67%ID^E:4e-15^RecName: Full=Flowering time control protein FPA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^38-90^E:3.9e-08`PF07744.10^SPOC^SPOC domain^345-441^E:3e-09",".",".","COG0724^Rna-binding protein","KEGG:ath:AT2G43410","GO:0000785^cellular_component^chromatin`GO:0005634^cellular_component^nucleus`GO:0003676^molecular_function^nucleic acid binding`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0030154^biological_process^cell differentiation`GO:0031048^biological_process^chromatin silencing by small RNA`GO:0009553^biological_process^embryo sac development`GO:0009908^biological_process^flower development`GO:0006378^biological_process^mRNA polyadenylation`GO:0000398^biological_process^mRNA splicing, via spliceosome`GO:0009911^biological_process^positive regulation of flower development`GO:0006351^biological_process^transcription, DNA-templated`GO:0010228^biological_process^vegetative to reproductive phase transition of meristem","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN47207_c2_g1","leaves S. yangii","roots S. yangii",5.51574564941784,0,0,"TRINITY_DN47207_c2_g1_i4","TKPR1_ARATH^TKPR1_ARATH^Q:2779-2318,H:8-160^55.19%ID^E:2e-32^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TKPR1_ARATH^TKPR1_ARATH^Q:1504-1289,H:161-230^46.75%ID^E:1e-10^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47207_c2_g1_i4.p1","2273-2785[-]","TKPR1_ARATH^TKPR1_ARATH^Q:3-156,H:8-160^55.19%ID^E:3e-49^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^3-131^E:8e-16`PF05368.10^NmrA^NmrA-like family^3-81^E:1.3e-08`PF08659.7^KR^KR domain^3-130^E:5.4e-05`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^5-129^E:4e-14`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^5-126^E:4.2e-11`PF07993.9^NAD_binding_4^Male sterility protein^5-132^E:5.9e-08`PF13460.3^NAD_binding_10^NAD(P)H-binding^7-126^E:1.3e-12",".",".","COG0451^Nad-dependent epimerase dehydratase","KEGG:ath:AT4G35420","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005634^cellular_component^nucleus`GO:0050662^molecular_function^coenzyme binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0009555^biological_process^pollen development`GO:0010584^biological_process^pollen exine formation`GO:0048316^biological_process^seed development`GO:0080110^biological_process^sporopollenin biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46606_c0_g1","leaves S. yangii","roots S. yangii",5.50866493253165,0,0,"TRINITY_DN46606_c0_g1_i3","SBT12_ARATH^SBT12_ARATH^Q:2397-202,H:7-773^42.19%ID^E:0^RecName: Full=Subtilisin-like protease SBT1.2 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46606_c0_g1_i3.p1","199-2421[-]","SBT12_ARATH^SBT12_ARATH^Q:9-740,H:7-773^42.19%ID^E:0^RecName: Full=Subtilisin-like protease SBT1.2 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05922.13^Inhibitor_I9^Peptidase inhibitor I9^30-109^E:3.6e-12`PF00082.19^Peptidase_S8^Subtilase family^132-560^E:2.7e-50`PF02225.19^PA^PA domain^354-443^E:7.7e-12","sigP:1^19^0.846^YES",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT1G04110","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0009897^cellular_component^external side of plasma membrane`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0042127^biological_process^regulation of cell proliferation`GO:0010103^biological_process^stomatal complex morphogenesis","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN9455_c0_g1","leaves S. yangii","roots S. yangii",5.50261358539894,0,0,"TRINITY_DN9455_c0_g1_i1","RK5_ARATH^RK5_ARATH^Q:1020-268,H:3-255^67.82%ID^E:9e-123^RecName: Full=50S ribosomal protein L5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN9455_c0_g1_i1.p1","223-1029[-]","RK5_ARATH^RK5_ARATH^Q:4-260,H:3-261^67.04%ID^E:3e-126^RecName: Full=50S ribosomal protein L5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00281.16^Ribosomal_L5^Ribosomal protein L5^77-133^E:1.9e-26`PF00673.18^Ribosomal_L5_C^ribosomal L5P family C-terminus^137-230^E:4.7e-32",".",".","COG0094^This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits","KEGG:ath:AT4G01310`KO:K02931","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009735^biological_process^response to cytokinin`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN45878_c4_g2","leaves S. yangii","roots S. yangii",5.45347604374408,0,0,"TRINITY_DN45878_c4_g2_i5","GSTUH_ARATH^GSTUH_ARATH^Q:285-965,H:1-227^60.7%ID^E:5e-78^RecName: Full=Glutathione S-transferase U17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSTUH_ARATH^GSTUH_ARATH^Q:2281-1964,H:1-106^68.22%ID^E:2e-58^RecName: Full=Glutathione S-transferase U17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSTUH_ARATH^GSTUH_ARATH^Q:1940-1608,H:108-219^44.64%ID^E:2e-58^RecName: Full=Glutathione S-transferase U17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45878_c4_g2_i5.p1","285-980[+]","GSTUH_ARATH^GSTUH_ARATH^Q:1-227,H:1-227^60.7%ID^E:4e-90^RecName: Full=Glutathione S-transferase U17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^7-78^E:1.3e-15`PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^9-81^E:7.8e-15`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^15-78^E:3.2e-07`PF00043.22^GST_C^Glutathione S-transferase, C-terminal domain^115-200^E:3.3e-06`PF14497.3^GST_C_3^Glutathione S-transferase, C-terminal domain^117-206^E:0.00018`PF13410.3^GST_C_2^Glutathione S-transferase, C-terminal domain^127-197^E:4.6e-06",".",".","ENOG410XSIX^glutathione Stransferase","KEGG:ath:AT1G10370`KO:K00799","GO:0009507^cellular_component^chloroplast`GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0004364^molecular_function^glutathione transferase activity`GO:0009704^biological_process^de-etiolation`GO:0006749^biological_process^glutathione metabolic process`GO:0048527^biological_process^lateral root development`GO:0080148^biological_process^negative regulation of response to water deprivation`GO:0040008^biological_process^regulation of growth`GO:0060416^biological_process^response to growth hormone`GO:0080167^biological_process^response to karrikin`GO:0009651^biological_process^response to salt stress`GO:0009636^biological_process^response to toxic substance`GO:0009407^biological_process^toxin catabolic process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45623_c3_g1","leaves S. yangii","roots S. yangii",5.45153792264681,0,0,"TRINITY_DN45623_c3_g1_i3","NIA_SOLLC^NIA_SOLLC^Q:3447-2050,H:1-467^81.4%ID^E:0^RecName: Full=Nitrate reductase [NADH];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon`NIA_SOLLC^NIA_SOLLC^Q:1596-268,H:468-911^83.15%ID^E:0^RecName: Full=Nitrate reductase [NADH];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45623_c3_g1_i3.p2","265-1593[-]","NIA_PETHY^NIA_PETHY^Q:1-442,H:468-909^81.94%ID^E:0^RecName: Full=Nitrate reductase [NADH];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF00173.25^Cyt-b5^Cytochrome b5-like Heme/Steroid binding domain^72-142^E:1.7e-23`PF00970.21^FAD_binding_6^Oxidoreductase FAD-binding domain^190-296^E:5.9e-34`PF00175.18^NAD_binding_1^Oxidoreductase NAD-binding domain^316-423^E:7.3e-34",".",".",".",".","GO:0020037^molecular_function^heme binding`GO:0030151^molecular_function^molybdenum ion binding`GO:0043546^molecular_function^molybdopterin cofactor binding`GO:0009703^molecular_function^nitrate reductase (NADH) activity`GO:0050464^molecular_function^nitrate reductase (NADPH) activity`GO:0042128^biological_process^nitrate assimilation`GO:0006809^biological_process^nitric oxide biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43461_c1_g1","leaves S. yangii","roots S. yangii",5.44969027379466,0,0,"TRINITY_DN43461_c1_g1_i3","TPT_PEA^TPT_PEA^Q:939-1679,H:156-402^89.88%ID^E:4e-153^RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`TPT_PEA^TPT_PEA^Q:240-713,H:1-155^64.02%ID^E:6e-56^RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN43461_c1_g1_i3.p2","1164-1682[+]","TPT1_BRAOB^TPT1_BRAOB^Q:1-172,H:236-407^90.12%ID^E:2e-109^RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica","PF03151.13^TPT^Triose-phosphate Transporter family^1-156^E:1.7e-56`PF00892.17^EamA^EamA-like transporter family^12-156^E:3.5e-08",".",".",".",".","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN41425_c0_g1","leaves S. yangii","roots S. yangii",5.44681746257153,0,0,"TRINITY_DN41425_c0_g1_i2","PNSL1_ARATH^PNSL1_ARATH^Q:917-207,H:1-238^53.5%ID^E:6e-81^RecName: Full=Photosynthetic NDH subunit of lumenal location 1, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41425_c0_g1_i2.p1","204-917[-]","PNSL1_ARATH^PNSL1_ARATH^Q:1-237,H:1-238^53.5%ID^E:2e-82^RecName: Full=Photosynthetic NDH subunit of lumenal location 1, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01789.13^PsbP^PsbP^80-234^E:9.1e-44",".",".","ENOG410Y9BC^PsbP-like protein 2","KEGG:ath:AT2G39470","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0019898^cellular_component^extrinsic component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0009579^cellular_component^thylakoid`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0006810^biological_process^transport","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN45263_c3_g1","leaves S. yangii","roots S. yangii",5.43197310274909,0,0,"TRINITY_DN45263_c3_g1_i4","P2C01_ORYSJ^P2C01_ORYSJ^Q:1197-262,H:13-296^58.65%ID^E:2e-104^RecName: Full=Probable protein phosphatase 2C 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45263_c3_g1_i4.p1","253-918[-]","P2C01_ORYSJ^P2C01_ORYSJ^Q:3-219,H:80-296^68.2%ID^E:3e-102^RecName: Full=Probable protein phosphatase 2C 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF07228.9^SpoIIE^Stage II sporulation protein E (SpoIIE)^10-214^E:5.8e-07",".",".","COG0631^Phosphatase","KEGG:osa:4324414","GO:0009570^cellular_component^chloroplast stroma`GO:0046872^molecular_function^metal ion binding`GO:0004721^molecular_function^phosphoprotein phosphatase activity`GO:0071482^biological_process^cellular response to light stimulus`GO:0035970^biological_process^peptidyl-threonine dephosphorylation`GO:0010207^biological_process^photosystem II assembly`GO:0046777^biological_process^protein autophosphorylation`GO:0010155^biological_process^regulation of proton transport`GO:0006364^biological_process^rRNA processing`GO:0010027^biological_process^thylakoid membrane organization","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN45332_c4_g1","leaves S. yangii","roots S. yangii",5.42014508314102,0,0,"TRINITY_DN45332_c4_g1_i6","GCST_SOLTU^GCST_SOLTU^Q:1481-273,H:3-405^90.32%ID^E:0^RecName: Full=Aminomethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45332_c4_g1_i6.p1","264-1490[-]","GCST_SOLTU^GCST_SOLTU^Q:4-406,H:3-405^90.32%ID^E:0^RecName: Full=Aminomethyltransferase, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01571.18^GCV_T^Aminomethyltransferase folate-binding domain^41-296^E:3.3e-87`PF08669.8^GCV_T_C^Glycine cleavage T-protein C-terminal barrel domain^305-397^E:2.2e-22",".",".","COG0404^The glycine cleavage system catalyzes the degradation of glycine (By similarity)","KEGG:sot:102602939`KO:K00605","GO:0005739^cellular_component^mitochondrion`GO:0004047^molecular_function^aminomethyltransferase activity`GO:0008483^molecular_function^transaminase activity`GO:0006546^biological_process^glycine catabolic process",".",".","."]
["TRINITY_DN43901_c6_g4","leaves S. yangii","roots S. yangii",5.41627880638652,0,0,"TRINITY_DN43901_c6_g4_i2","ZOG_PHALU^ZOG_PHALU^Q:1473-103,H:12-459^51.09%ID^E:9e-152^RecName: Full=Zeatin O-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus",".","TRINITY_DN43901_c6_g4_i2.p1","100-1509[-]","ZOG_PHALU^ZOG_PHALU^Q:13-469,H:12-459^51.09%ID^E:1e-159^RecName: Full=Zeatin O-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^272-397^E:1.1e-22",".",".",".","KEGG:ag:AAD04166`KO:K13492","GO:0050403^molecular_function^trans-zeatin O-beta-D-glucosyltransferase activity","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45597_c3_g1","leaves S. yangii","roots S. yangii",5.40909191323585,0,0,"TRINITY_DN45597_c3_g1_i4","TI214_NICTO^TI214_NICTO^Q:771-3311,H:1-873^70.02%ID^E:0^RecName: Full=Protein TIC 214 {ECO:0000250|UniProtKB:P56785};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45597_c3_g1_i4.p2","4285-5547[-]","RH18_ARATH^RH18_ARATH^Q:8-418,H:6-414^74.33%ID^E:0^RecName: Full=DEAD-box ATP-dependent RNA helicase 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00270.26^DEAD^DEAD/DEAH box helicase^42-215^E:4.3e-41`PF04851.12^ResIII^Type III restriction enzyme, res subunit^57-195^E:1.3e-05`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^265-377^E:4.4e-25",".",".","ENOG410XNT7^atp-dependent rna helicase","KEGG:ath:AT5G05450`KO:K14809","GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0003723^molecular_function^RNA binding","GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN45222_c3_g1","leaves S. yangii","roots S. yangii",5.40400528478863,0,0,"TRINITY_DN45222_c3_g1_i11","FTSH2_ARATH^FTSH2_ARATH^Q:2599-1046,H:1-511^83.08%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FTSH2_ARATH^FTSH2_ARATH^Q:883-329,H:495-678^88.11%ID^E:2e-102^RecName: Full=ATP-dependent zinc metalloprotease FTSH 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45222_c3_g1_i11.p1","1094-2599[-]","FTSH2_ARATH^FTSH2_ARATH^Q:1-501,H:1-496^85.49%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06068.10^TIP49^TIP49 C-terminus^266-302^E:1.7e-05`PF07728.11^AAA_5^AAA domain (dynein-related subfamily)^267-359^E:0.00019`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^268-399^E:1.4e-45`PF01434.15^Peptidase_M41^Peptidase family M41^462-501^E:1.8e-09",".",".","COG0465^Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)","KEGG:ath:AT2G30950`KO:K03798","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0005524^molecular_function^ATP binding`GO:0004176^molecular_function^ATP-dependent peptidase activity`GO:0046872^molecular_function^metal ion binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008237^molecular_function^metallopeptidase activity`GO:0007275^biological_process^multicellular organism development`GO:0010205^biological_process^photoinhibition`GO:0010206^biological_process^photosystem II repair`GO:0030163^biological_process^protein catabolic process`GO:0006508^biological_process^proteolysis`GO:0010304^biological_process^PSII associated light-harvesting complex II catabolic process`GO:0072593^biological_process^reactive oxygen species metabolic process`GO:0009735^biological_process^response to cytokinin`GO:0010027^biological_process^thylakoid membrane organization","GO:0003678^molecular_function^DNA helicase activity`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN43952_c0_g1","leaves S. yangii","roots S. yangii",5.3925163285999,0,0,"TRINITY_DN43952_c0_g1_i3","DUR3_ARATH^DUR3_ARATH^Q:2071-356,H:128-703^74.7%ID^E:0^RecName: Full=Urea-proton symporter DUR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DUR3_ARATH^DUR3_ARATH^Q:2537-2133,H:3-136^80%ID^E:0^RecName: Full=Urea-proton symporter DUR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43952_c0_g1_i3.p1","329-2062[-]","DUR3_ARATH^DUR3_ARATH^Q:1-569,H:131-703^74.56%ID^E:0^RecName: Full=Urea-proton symporter DUR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00474.14^SSF^Sodium:solute symporter family^12-366^E:1.8e-20",".",".","COG0591^symporter","KEGG:ath:AT5G45380","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015293^molecular_function^symporter activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0071918^biological_process^urea transmembrane transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47693_c8_g2","leaves S. yangii","roots S. yangii",5.38288163659818,0,0,"TRINITY_DN47693_c8_g2_i4","PAP12_ARATH^PAP12_ARATH^Q:199-1206,H:2-363^56.08%ID^E:9e-131^RecName: Full=Probable plastid-lipid-associated protein 12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47693_c8_g2_i4.p1","211-1206[+]","PAP12_ARATH^PAP12_ARATH^Q:4-332,H:9-363^56.9%ID^E:6e-131^RecName: Full=Probable plastid-lipid-associated protein 12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04755.9^PAP_fibrillin^PAP_fibrillin^58-221^E:6.8e-35",".",".","ENOG410YI3F^plastid-lipid-associated protein 12","KEGG:ath:AT1G51110","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016020^cellular_component^membrane`GO:0010287^cellular_component^plastoglobule",".",".","."]
["TRINITY_DN44030_c1_g1","leaves S. yangii","roots S. yangii",5.3690720271043,0,0,"TRINITY_DN44030_c1_g1_i6","RFS2_ARATH^RFS2_ARATH^Q:913-506,H:1-145^44.83%ID^E:4e-34^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RFS2_ARATH^RFS2_ARATH^Q:141-1,H:176-222^55.32%ID^E:3e-11^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44030_c1_g1_i6.p1","440-1051[-]","RFS2_ARATH^RFS2_ARATH^Q:47-182,H:1-145^44.83%ID^E:7e-36^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05691.9^Raffinose_syn^Raffinose synthase or seed imbibition protein Sip1^60-182^E:4.5e-34",".",".","ENOG410YBU9^raffinose synthase","KEGG:ath:AT3G57520`KO:K06617","GO:0009506^cellular_component^plasmodesma`GO:0052692^molecular_function^raffinose alpha-galactosidase activity`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0034484^biological_process^raffinose catabolic process`GO:0080167^biological_process^response to karrikin`GO:0006979^biological_process^response to oxidative stress",".",".","."]
["TRINITY_DN47206_c4_g1","leaves S. yangii","roots S. yangii",5.36841668333871,0,0,"TRINITY_DN47206_c4_g1_i1","MYO2_ARATH^MYO2_ARATH^Q:3468-1615,H:578-1205^54.49%ID^E:0^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47206_c4_g1_i1.p1","1555-3468[-]","MYO2_ARATH^MYO2_ARATH^Q:1-634,H:578-1219^54.6%ID^E:0^RecName: Full=Myosin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00063.18^Myosin_head^Myosin head (motor domain)^1-295^E:6.2e-90`PF00612.24^IQ^IQ calmodulin-binding motif^336-352^E:0.011`PF00612.24^IQ^IQ calmodulin-binding motif^373-390^E:4.7e-05",".",".","COG5022^myosin heavy chain","KEGG:ath:AT5G54280`KO:K10357","GO:0005768^cellular_component^endosome`GO:0016459^cellular_component^myosin complex`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0003774^molecular_function^motor activity`GO:0030048^biological_process^actin filament-based movement`GO:0006897^biological_process^endocytosis","GO:0003774^molecular_function^motor activity`GO:0005524^molecular_function^ATP binding`GO:0016459^cellular_component^myosin complex`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47309_c0_g2","leaves S. yangii","roots S. yangii",5.36468825486965,0,0,"TRINITY_DN47309_c0_g2_i9","P2SAF_ARATH^P2SAF_ARATH^Q:1351-368,H:76-403^87.5%ID^E:0^RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47309_c0_g2_i9.p1","365-1567[-]","P2SAF_ARATH^P2SAF_ARATH^Q:1-400,H:1-403^75.86%ID^E:0^RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14870.3^PSII_BNR^Photosynthesis system II assembly factor YCF48^80-398^E:4.1e-121",".",".","COG4447^The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity","KEGG:ath:AT5G23120","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009533^cellular_component^chloroplast stromal thylakoid`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009523^cellular_component^photosystem II`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0015979^biological_process^photosynthesis`GO:0009657^biological_process^plastid organization`GO:0006461^biological_process^protein complex assembly`GO:0046686^biological_process^response to cadmium ion`GO:0009735^biological_process^response to cytokinin",".",".","."]
["TRINITY_DN42139_c0_g1","leaves S. yangii","roots S. yangii",5.36279217980643,0,0,"TRINITY_DN42139_c0_g1_i12","PHSH_SOLTU^PHSH_SOLTU^Q:477-2948,H:14-838^84.61%ID^E:0^RecName: Full=Alpha-glucan phosphorylase, H isozyme;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN42139_c0_g1_i12.p1","411-2951[+]","PHSH_SOLTU^PHSH_SOLTU^Q:23-846,H:14-838^84.61%ID^E:0^RecName: Full=Alpha-glucan phosphorylase, H isozyme;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00343.17^Phosphorylase^Carbohydrate phosphorylase^120-840^E:1.8e-303",".",".",".","KEGG:sot:102577532`KO:K00688","GO:0005737^cellular_component^cytoplasm`GO:0008184^molecular_function^glycogen phosphorylase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0005975^biological_process^carbohydrate metabolic process","GO:0008184^molecular_function^glycogen phosphorylase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44591_c7_g3","leaves S. yangii","roots S. yangii",5.36159310794367,0,0,"TRINITY_DN44591_c7_g3_i2","PAP3_BRACM^PAP3_BRACM^Q:1419-442,H:20-359^57.46%ID^E:2e-118^RecName: Full=Plastid lipid-associated protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN44591_c7_g3_i2.p1","439-1479[-]","PAP3_ARATH^PAP3_ARATH^Q:1-346,H:1-375^54.01%ID^E:3e-122^RecName: Full=Probable plastid-lipid-associated protein 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04755.9^PAP_fibrillin^PAP_fibrillin^123-337^E:7.7e-69",".",".","ENOG4111HVZ^FiBrilliN","KEGG:ath:AT2G35490","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009536^cellular_component^plastid`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid",".",".","."]
["TRINITY_DN44964_c2_g3","leaves S. yangii","roots S. yangii",5.35975066196935,0,0,"TRINITY_DN44964_c2_g3_i1","U74F2_ARATH^U74F2_ARATH^Q:1556-186,H:1-446^53.25%ID^E:1e-162^RecName: Full=UDP-glycosyltransferase 74F2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44964_c2_g3_i1.p1","162-1556[-]","U74F2_ARATH^U74F2_ARATH^Q:1-457,H:1-446^54.98%ID^E:2e-180^RecName: Full=UDP-glycosyltransferase 74F2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^274-424^E:5e-21",".",".","COG1819^Transferase","KEGG:ath:AT2G43820`KO:K13691","GO:0043231^cellular_component^intracellular membrane-bounded organelle`GO:0052641^molecular_function^benzoic acid glucosyltransferase activity`GO:0080043^molecular_function^quercetin 3-O-glucosyltransferase activity`GO:0080044^molecular_function^quercetin 7-O-glucosyltransferase activity`GO:0052639^molecular_function^salicylic acid glucosyltransferase (ester-forming) activity`GO:0052640^molecular_function^salicylic acid glucosyltransferase (glucoside-forming) activity`GO:0080002^molecular_function^UDP-glucose:4-aminobenzoate acylglucosyltransferase activity`GO:0035251^molecular_function^UDP-glucosyltransferase activity`GO:0018874^biological_process^benzoate metabolic process`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0052696^biological_process^flavonoid glucuronidation`GO:0046482^biological_process^para-aminobenzoic acid metabolic process`GO:0009696^biological_process^salicylic acid metabolic process","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45715_c3_g5","leaves S. yangii","roots S. yangii",5.35911860566969,0,0,"TRINITY_DN45715_c3_g5_i9","PGL1A_ARATH^PGL1A_ARATH^Q:181-1080,H:1-301^71.19%ID^E:4e-126^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45715_c3_g5_i9.p1","1-1086[+]","PGL1A_ARATH^PGL1A_ARATH^Q:61-360,H:1-301^69.35%ID^E:6e-150^RecName: Full=PGR5-like protein 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4110C1Q^PGR5-like protein 1A","KEGG:ath:AT4G22890","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009579^cellular_component^thylakoid`GO:0042802^molecular_function^identical protein binding`GO:0016730^molecular_function^oxidoreductase activity, acting on iron-sulfur proteins as donors`GO:0015979^biological_process^photosynthesis`GO:0009773^biological_process^photosynthetic electron transport in photosystem I",".",".","."]
["TRINITY_DN29111_c0_g1","leaves S. yangii","roots S. yangii",5.34643719542121,0,0,"TRINITY_DN29111_c0_g1_i1","LPA1_ARATH^LPA1_ARATH^Q:322-768,H:187-335^34.23%ID^E:2e-13^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN29111_c0_g1_i1.p1","142-939[+]","LPA1_ARATH^LPA1_ARATH^Q:61-209,H:187-335^34.23%ID^E:9e-15^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11998.5^DUF3493^Protein of unknown function (DUF3493)^57-134^E:1.4e-27",".",".","ENOG410YYDP^Protein of unknown function (DUF3493)","KEGG:ath:AT1G02910","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010270^biological_process^photosystem II oxygen evolving complex assembly",".",".","."]
["TRINITY_DN44209_c3_g3","leaves S. yangii","roots S. yangii",5.34492514106349,0,0,"TRINITY_DN44209_c3_g3_i3","GOLS1_AJURE^GOLS1_AJURE^Q:1616-969,H:1-216^86.11%ID^E:1e-130^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga`GOLS1_AJURE^GOLS1_AJURE^Q:365-171,H:264-333^81.43%ID^E:6e-28^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga`GOLS1_AJURE^GOLS1_AJURE^Q:837-697,H:215-261^89.36%ID^E:1e-19^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga",".","TRINITY_DN44209_c3_g3_i3.p1","951-1616[-]","GOLS1_AJURE^GOLS1_AJURE^Q:1-216,H:1-216^86.11%ID^E:2e-136^RecName: Full=Galactinol synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Teucrioideae; Ajuga","PF01501.17^Glyco_transf_8^Glycosyl transferase family 8^28-204^E:5.5e-25",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0047216^molecular_function^inositol 3-alpha-galactosyltransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0052576^biological_process^carbohydrate storage`GO:0070417^biological_process^cellular response to cold`GO:0006012^biological_process^galactose metabolic process`GO:0008152^biological_process^metabolic process`GO:0010325^biological_process^raffinose family oligosaccharide biosynthetic process","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN42323_c0_g1","leaves S. yangii","roots S. yangii",5.34207136964721,0,0,"TRINITY_DN42323_c0_g1_i11","P2C57_ARATH^P2C57_ARATH^Q:124-576,H:1-148^53.64%ID^E:4e-34^RecName: Full=Protein phosphatase 2C 57;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42323_c0_g1_i11.p1","124-579[+]","P2C57_ARATH^P2C57_ARATH^Q:1-151,H:1-148^53.64%ID^E:5e-44^RecName: Full=Protein phosphatase 2C 57;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0631^Phosphatase","KEGG:ath:AT4G27800","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005737^cellular_component^cytoplasm`GO:0016021^cellular_component^integral component of membrane`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0009579^cellular_component^thylakoid`GO:0046872^molecular_function^metal ion binding`GO:0016791^molecular_function^phosphatase activity`GO:0004721^molecular_function^phosphoprotein phosphatase activity`GO:0016311^biological_process^dephosphorylation`GO:0009767^biological_process^photosynthetic electron transport chain`GO:0080005^biological_process^photosystem stoichiometry adjustment",".",".","."]
["TRINITY_DN47475_c3_g1","leaves S. yangii","roots S. yangii",5.31233107975695,0,0,"TRINITY_DN47475_c3_g1_i2","EFGC1_SOYBN^EFGC1_SOYBN^Q:2698-506,H:54-787^87.87%ID^E:0^RecName: Full=Elongation factor G-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN47475_c3_g1_i2.p1","503-2854[-]","EFGC1_SOYBN^EFGC1_SOYBN^Q:1-783,H:1-787^84.43%ID^E:0^RecName: Full=Elongation factor G-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00009.24^GTP_EFTU^Elongation factor Tu GTP binding domain^95-367^E:2.4e-70`PF03144.22^GTP_EFTU_D2^Elongation factor Tu domain 2^410-477^E:8.9e-15`PF14492.3^EFG_II^Elongation Factor G, domain II^490-563^E:9.8e-33`PF03764.15^EFG_IV^Elongation factor G, domain IV^565-683^E:4.9e-45`PF00679.21^EFG_C^Elongation factor G C-terminus^687-773^E:5.4e-26",".",".","COG0480^Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)","KEGG:gmx:100797377`KO:K02355","GO:0009507^cellular_component^chloroplast`GO:0005622^cellular_component^intracellular`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003746^molecular_function^translation elongation factor activity`GO:0032790^biological_process^ribosome disassembly","GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN46287_c1_g1","leaves S. yangii","roots S. yangii",5.2697106860507,0,0,"TRINITY_DN46287_c1_g1_i2","UNE10_ARATH^UNE10_ARATH^Q:1476-406,H:1-385^48.51%ID^E:2e-76^RecName: Full=Transcription factor UNE10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46287_c1_g1_i2.p1","361-1698[-]","UNE10_ARATH^UNE10_ARATH^Q:75-431,H:1-385^48.89%ID^E:5e-79^RecName: Full=Transcription factor UNE10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^282-327^E:2e-13",".",".","ENOG4111B0G^Transcription factor","KEGG:ath:AT4G00050","GO:0005634^cellular_component^nucleus`GO:0009506^cellular_component^plasmodesma`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009567^biological_process^double fertilization forming a zygote and endosperm`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN47234_c3_g1","leaves S. yangii","roots S. yangii",5.26559447948018,0,0,"TRINITY_DN47234_c3_g1_i5","CP511_ARATH^CP511_ARATH^Q:68-1078,H:151-487^80.42%ID^E:0^RecName: Full=Sterol 14-demethylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47234_c3_g1_i5.p2","1462-2238[-]","FKB19_ARATH^FKB19_ARATH^Q:2-256,H:1-256^65.5%ID^E:4e-114^RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00254.25^FKBP_C^FKBP-type peptidyl-prolyl cis-trans isomerase^131-251^E:4.1e-19",".",".","COG0545^Peptidyl-prolyl cis-trans isomerase","KEGG:ath:AT5G13410","GO:0009507^cellular_component^chloroplast`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN44972_c2_g4","leaves S. yangii","roots S. yangii",5.25171677517788,0,0,"TRINITY_DN44972_c2_g4_i9","LPA1_ARATH^LPA1_ARATH^Q:1041-1286,H:86-167^35.37%ID^E:4e-06^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44972_c2_g4_i9.p2","969-1367[+]","LPA1_ARATH^LPA1_ARATH^Q:21-109,H:82-170^35.96%ID^E:1e-09^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13432.3^TPR_16^Tetratricopeptide repeat^19-76^E:0.00012",".",".","ENOG410YYDP^Protein of unknown function (DUF3493)","KEGG:ath:AT1G02910","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010270^biological_process^photosystem II oxygen evolving complex assembly",".",".","."]
["TRINITY_DN46511_c4_g1","leaves S. yangii","roots S. yangii",5.25168530960578,0,0,"TRINITY_DN46511_c4_g1_i7","RPE_SPIOL^RPE_SPIOL^Q:785-510,H:37-128^85.87%ID^E:2e-59^RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia`RPE_SPIOL^RPE_SPIOL^Q:432-313,H:127-166^95%ID^E:2e-59^RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN46511_c4_g1_i7.p1","492-821[-]","RPE_SPIOL^RPE_SPIOL^Q:13-104,H:37-128^85.87%ID^E:2e-50^RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00834.16^Ribul_P_3_epim^Ribulose-phosphate 3 epimerase family^40-105^E:3e-28",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0046872^molecular_function^metal ion binding`GO:0004750^molecular_function^ribulose-phosphate 3-epimerase activity`GO:0006098^biological_process^pentose-phosphate shunt`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0016857^molecular_function^racemase and epimerase activity, acting on carbohydrates and derivatives`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN46218_c2_g4","leaves S. yangii","roots S. yangii",5.23855560487739,0,0,"TRINITY_DN46218_c2_g4_i4","BBX24_ARATH^BBX24_ARATH^Q:448-966,H:1-177^61.58%ID^E:3e-59^RecName: Full=B-box zinc finger protein 24 {ECO:0000303|PubMed:19920209};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BBX24_ARATH^BBX24_ARATH^Q:1246-1533,H:150-248^43%ID^E:3e-14^RecName: Full=B-box zinc finger protein 24 {ECO:0000303|PubMed:19920209};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46218_c2_g4_i4.p1","448-1008[+]","BBX24_ARATH^BBX24_ARATH^Q:1-173,H:1-177^61.58%ID^E:2e-64^RecName: Full=B-box zinc finger protein 24 {ECO:0000303|PubMed:19920209};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00643.21^zf-B_box^B-box zinc finger^4-44^E:8.7e-06`PF00643.21^zf-B_box^B-box zinc finger^53-95^E:1.9e-08",".",".","ENOG410YBMW^nucleic acid binding transcription factor activity","KEGG:ath:AT1G06040","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003712^molecular_function^transcription cofactor activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0080167^biological_process^response to karrikin`GO:0009416^biological_process^response to light stimulus`GO:0006351^biological_process^transcription, DNA-templated","GO:0008270^molecular_function^zinc ion binding`GO:0005622^cellular_component^intracellular",".","."]
["TRINITY_DN44470_c3_g2","leaves S. yangii","roots S. yangii",5.23805262689118,0,0,"TRINITY_DN44470_c3_g2_i2","RK1_ARATH^RK1_ARATH^Q:568-1263,H:110-341^82.33%ID^E:3e-139^RecName: Full=50S ribosomal protein L1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44470_c3_g2_i2.p1","889-1272[+]","RK1_ARATH^RK1_ARATH^Q:1-125,H:217-341^82.4%ID^E:4e-74^RecName: Full=50S ribosomal protein L1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00687.18^Ribosomal_L1^Ribosomal protein L1p/L10e family^2-112^E:1.2e-30",".",".","COG0081^Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (By similarity)","KEGG:ath:AT3G63490`KO:K02863","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0015934^cellular_component^large ribosomal subunit`GO:0016020^cellular_component^membrane`GO:0005634^cellular_component^nucleus`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN46223_c5_g3","leaves S. yangii","roots S. yangii",5.22546652921867,0,0,"TRINITY_DN46223_c5_g3_i4","PPH_ARATH^PPH_ARATH^Q:327-1382,H:1-349^58.26%ID^E:1e-146^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPH_ARATH^PPH_ARATH^Q:1460-1834,H:349-476^53.12%ID^E:1e-146^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46223_c5_g3_i4.p1","327-1385[+]","PPH_ARATH^PPH_ARATH^Q:1-352,H:1-349^58.26%ID^E:1e-139^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^125-257^E:3.2e-12`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^127-277^E:9.5e-14`PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^127-248^E:2e-06",".",".","COG0596^Alpha beta hydrolase","KEGG:ath:AT5G13800","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0080124^molecular_function^pheophytinase activity`GO:0015996^biological_process^chlorophyll catabolic process",".",".","."]
["TRINITY_DN46542_c2_g6","leaves S. yangii","roots S. yangii",5.22413061895052,0,0,"TRINITY_DN46542_c2_g6_i4","SYAP_POPTR^SYAP_POPTR^Q:2677-320,H:209-991^76.46%ID^E:0^RecName: Full=Alanine--tRNA ligase, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03134};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus`SYAP_POPTR^SYAP_POPTR^Q:3195-3001,H:150-214^78.46%ID^E:2e-25^RecName: Full=Alanine--tRNA ligase, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03134};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus",".","TRINITY_DN46542_c2_g6_i4.p1","308-2599[-]","SYAP_POPTR^SYAP_POPTR^Q:1-760,H:235-991^76.45%ID^E:0^RecName: Full=Alanine--tRNA ligase, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03134};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus","PF01411.16^tRNA-synt_2c^tRNA synthetases class II (A)^2-431^E:1.5e-123`PF07973.11^tRNA_SAD^Threonyl and Alanyl tRNA synthetase second additional domain^530-573^E:4.8e-18`PF02272.16^DHHA1^DHHA1 domain^683-751^E:7.2e-13",".",".","COG0013^Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity)","KEGG:pop:POPTR_0009s14340g`KO:K01872","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005739^cellular_component^mitochondrion`GO:0004813^molecular_function^alanine-tRNA ligase activity`GO:0016597^molecular_function^amino acid binding`GO:0005524^molecular_function^ATP binding`GO:0000049^molecular_function^tRNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0006419^biological_process^alanyl-tRNA aminoacylation`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0006400^biological_process^tRNA modification","GO:0000166^molecular_function^nucleotide binding`GO:0004813^molecular_function^alanine-tRNA ligase activity`GO:0005524^molecular_function^ATP binding`GO:0006419^biological_process^alanyl-tRNA aminoacylation`GO:0016876^molecular_function^ligase activity, forming aminoacyl-tRNA and related compounds`GO:0043039^biological_process^tRNA aminoacylation`GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN44262_c4_g1","leaves S. yangii","roots S. yangii",5.21856591180198,0,0,"TRINITY_DN44262_c4_g1_i9","OTU_ARATH^OTU_ARATH^Q:1516-800,H:79-314^56.97%ID^E:4e-83^RecName: Full=OTU domain-containing protein At3g57810;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44262_c4_g1_i9.p1","794-1726[-]","OTU_ARATH^OTU_ARATH^Q:1-309,H:1-314^47.17%ID^E:1e-90^RecName: Full=OTU domain-containing protein At3g57810;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02338.16^OTU^OTU-like cysteine protease^169-299^E:2.8e-27",".",".","COG5539^otu domain-containing protein","KEGG:ath:AT3G57810","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN46762_c1_g3","leaves S. yangii","roots S. yangii",5.1690339119214,0,0,"TRINITY_DN46762_c1_g3_i6","WRK50_ARATH^WRK50_ARATH^Q:1462-1367,H:105-138^67.65%ID^E:4e-08^RecName: Full=Probable WRKY transcription factor 50;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46762_c1_g3_i6.p1","1340-1765[-]","WRK50_ARATH^WRK50_ARATH^Q:102-133,H:105-138^67.65%ID^E:7e-10^RecName: Full=Probable WRKY transcription factor 50;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^110-131^E:4.1e-07",".",".","ENOG410YQZM^WRKY transcription factor","KEGG:ath:AT5G26170","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0050832^biological_process^defense response to fungus`GO:0009867^biological_process^jasmonic acid mediated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44318_c0_g1","leaves S. yangii","roots S. yangii",5.1658574996698,0,0,"TRINITY_DN44318_c0_g1_i5","KEA3_ARATH^KEA3_ARATH^Q:552-2423,H:85-705^80.32%ID^E:0^RecName: Full=K(+) efflux antiporter 3, chloroplastic {ECO:0000303|PubMed:11500563};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44318_c0_g1_i5.p1","252-2423[+]","KEA3_ARATH^KEA3_ARATH^Q:101-724,H:85-705^80.32%ID^E:0^RecName: Full=K(+) efflux antiporter 3, chloroplastic {ECO:0000303|PubMed:11500563};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00999.18^Na_H_Exchanger^Sodium/hydrogen exchanger family^126-511^E:6.7e-69`PF02254.15^TrkA_N^TrkA-N domain^543-665^E:1.9e-17",".",".","COG0475^Sodium hydrogen exchanger`COG1226^PotAssium voltage-gated channel","KEGG:ath:AT4G04850","GO:0031969^cellular_component^chloroplast membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0015299^molecular_function^solute:proton antiporter activity`GO:0006813^biological_process^potassium ion transport","GO:0015299^molecular_function^solute:proton antiporter activity`GO:0006812^biological_process^cation transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0006813^biological_process^potassium ion transport",".","."]
["TRINITY_DN43686_c2_g10","leaves S. yangii","roots S. yangii",5.16522084512703,0,0,"TRINITY_DN43686_c2_g10_i1","CCU11_ARATH^CCU11_ARATH^Q:853-332,H:16-189^68.39%ID^E:6e-72^RecName: Full=Cyclin-U1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43686_c2_g10_i1.p1","236-904[-]","CCU11_ARATH^CCU11_ARATH^Q:18-191,H:16-189^68.39%ID^E:4e-74^RecName: Full=Cyclin-U1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08613.8^Cyclin^Cyclin^58-164^E:5.6e-34`PF00134.20^Cyclin_N^Cyclin, N-terminal domain^74-164^E:6e-10",".",".","ENOG4111TTK^Cyclin-dependent protein kinase","KEGG:ath:AT3G21870","GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0000079^biological_process^regulation of cyclin-dependent protein serine/threonine kinase activity","GO:0019901^molecular_function^protein kinase binding`GO:0000079^biological_process^regulation of cyclin-dependent protein serine/threonine kinase activity",".","."]
["TRINITY_DN45113_c4_g4","leaves S. yangii","roots S. yangii",5.16497816832648,0,0,"TRINITY_DN45113_c4_g4_i1","14KD_DAUCA^14KD_DAUCA^Q:585-827,H:56-136^72.84%ID^E:9e-27^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45113_c4_g4_i1.p1","408-833[+]","14KD_DAUCA^14KD_DAUCA^Q:1-140,H:1-136^61.43%ID^E:1e-42^RecName: Full=14 kDa proline-rich protein DC2.15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF14547.3^Hydrophob_seed^Hydrophobic seed protein^57-141^E:1.1e-29`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^58-140^E:2.7e-08","sigP:1^25^0.89^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN44337_c2_g1","leaves S. yangii","roots S. yangii",5.15985226409026,0,0,"TRINITY_DN44337_c2_g1_i2","COL4_ARATH^COL4_ARATH^Q:1246-242,H:1-362^51.87%ID^E:4e-77^RecName: Full=Zinc finger protein CONSTANS-LIKE 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44337_c2_g1_i2.p1","239-1267[-]","COL4_ARATH^COL4_ARATH^Q:8-342,H:1-362^51.34%ID^E:8e-98^RecName: Full=Zinc finger protein CONSTANS-LIKE 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00643.21^zf-B_box^B-box zinc finger^11-50^E:4.6e-06`PF00643.21^zf-B_box^B-box zinc finger^53-98^E:7.2e-08`PF06203.11^CCT^CCT motif^278-320^E:1.5e-17",".",".","COG5641^Transcription factor","KEGG:ath:AT5G24930","GO:0005634^cellular_component^nucleus`GO:0008270^molecular_function^zinc ion binding","GO:0008270^molecular_function^zinc ion binding`GO:0005622^cellular_component^intracellular`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45982_c2_g1","leaves S. yangii","roots S. yangii",5.15344272952192,0,0,"TRINITY_DN45982_c2_g1_i2","KAI2_ARATH^KAI2_ARATH^Q:709-332,H:1-126^77.78%ID^E:1e-67^RecName: Full=Probable esterase KAI2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45982_c2_g1_i2.p1","251-709[-]","KAI2_ARATH^KAI2_ARATH^Q:1-126,H:1-126^77.78%ID^E:2e-70^RecName: Full=Probable esterase KAI2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^19-123^E:2.5e-11`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^20-120^E:1.6e-09",".",".","COG0596^Alpha beta hydrolase","KEGG:ath:AT4G37470","GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0016787^molecular_function^hydrolase activity`GO:0009704^biological_process^de-etiolation`GO:0009640^biological_process^photomorphogenesis`GO:0080167^biological_process^response to karrikin",".",".","."]
["TRINITY_DN44963_c7_g1","leaves S. yangii","roots S. yangii",5.14627241083777,0,0,"TRINITY_DN44963_c7_g1_i1","ANTR2_ARATH^ANTR2_ARATH^Q:292-2136,H:1-541^66.72%ID^E:0^RecName: Full=Ascorbate transporter, chloroplastic {ECO:0000303|PubMed:25557369};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44963_c7_g1_i1.p1","292-2139[+]","ANTR2_ARATH^ANTR2_ARATH^Q:1-615,H:1-541^66.72%ID^E:0^RecName: Full=Ascorbate transporter, chloroplastic {ECO:0000303|PubMed:25557369};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^212-573^E:1.1e-60",".",".","ENOG410XPWC^solute carrier family 17","KEGG:ath:AT4G00370","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009536^cellular_component^plastid`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0015229^molecular_function^L-ascorbic acid transporter activity`GO:0098656^biological_process^anion transmembrane transport`GO:0015882^biological_process^L-ascorbic acid transport`GO:0010028^biological_process^xanthophyll cycle","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN41775_c0_g1","leaves S. yangii","roots S. yangii",5.12788217884063,0,0,"TRINITY_DN41775_c0_g1_i4","PAP4_ARATH^PAP4_ARATH^Q:1002-595,H:62-197^64.71%ID^E:1e-46^RecName: Full=Probable plastid-lipid-associated protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PAP4_ARATH^PAP4_ARATH^Q:408-277,H:197-240^77.27%ID^E:3e-16^RecName: Full=Probable plastid-lipid-associated protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41775_c0_g1_i4.p1","523-1170[-]","PAP4_ARATH^PAP4_ARATH^Q:57-192,H:62-197^64.71%ID^E:3e-56^RecName: Full=Probable plastid-lipid-associated protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04755.9^PAP_fibrillin^PAP_fibrillin^68-184^E:1.6e-28",".",".","ENOG4111HBZ^plastid-lipid-associated protein 4","KEGG:ath:AT3G26070","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010287^cellular_component^plastoglobule",".",".","."]
["TRINITY_DN45725_c0_g1","leaves S. yangii","roots S. yangii",5.11802856958003,0,0,"TRINITY_DN45725_c0_g1_i11","KEA2_ARATH^KEA2_ARATH^Q:2821-968,H:1-592^41.53%ID^E:2e-104^RecName: Full=K(+) efflux antiporter 2, chloroplastic {ECO:0000303|PubMed:11500563};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`KEA2_ARATH^KEA2_ARATH^Q:638-78,H:592-746^77.01%ID^E:5e-55^RecName: Full=K(+) efflux antiporter 2, chloroplastic {ECO:0000303|PubMed:11500563};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45725_c0_g1_i11.p1","908-2827[-]","KEA2_ARATH^KEA2_ARATH^Q:3-620,H:1-592^43.61%ID^E:6e-124^RecName: Full=K(+) efflux antiporter 2, chloroplastic {ECO:0000303|PubMed:11500563};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0475^Sodium hydrogen exchanger`COG1226^PotAssium voltage-gated channel",".","GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0015386^molecular_function^potassium:proton antiporter activity`GO:0071805^biological_process^potassium ion transmembrane transport",".",".","."]
["TRINITY_DN28442_c0_g1","leaves S. yangii","roots S. yangii",5.09332807793901,0,0,"TRINITY_DN28442_c0_g1_i2","RR31_ARATH^RR31_ARATH^Q:288-485,H:51-116^74.24%ID^E:5e-11^RecName: Full=30S ribosomal protein S31, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28442_c0_g1_i2.p1","144-494[+]","RR31_ARATH^RR31_ARATH^Q:49-114,H:51-116^74.24%ID^E:9e-23^RecName: Full=30S ribosomal protein S31, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17067.2^RPS31^Ribosomal protein S31e^1-97^E:9.9e-27",".",".","ENOG410XX58^Ribosomal protein","KEGG:ath:AT2G38140`KO:K19033","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0032544^biological_process^plastid translation",".",".","."]
["TRINITY_DN43908_c2_g1","leaves S. yangii","roots S. yangii",5.05678625259963,0,0,"TRINITY_DN43908_c2_g1_i2","GGT2_ARATH^GGT2_ARATH^Q:617-2050,H:4-481^88.91%ID^E:0^RecName: Full=Glutamate--glyoxylate aminotransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43908_c2_g1_i2.p1","611-2053[+]","GGT2_ARATH^GGT2_ARATH^Q:3-480,H:4-481^88.91%ID^E:0^RecName: Full=Glutamate--glyoxylate aminotransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00155.18^Aminotran_1_2^Aminotransferase class I and II^83-446^E:4.4e-35",".",".","COG0436^aminotransferase","KEGG:ath:AT1G70580`KO:K14272","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005777^cellular_component^peroxisome`GO:0008453^molecular_function^alanine-glyoxylate transaminase activity`GO:0047958^molecular_function^glycine:2-oxoglutarate aminotransferase activity`GO:0004021^molecular_function^L-alanine:2-oxoglutarate aminotransferase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0009058^biological_process^biosynthetic process`GO:0042853^biological_process^L-alanine catabolic process","GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0009058^biological_process^biosynthetic process",".","."]
["TRINITY_DN43164_c0_g1","leaves S. yangii","roots S. yangii",5.04829590773086,0,0,"TRINITY_DN43164_c0_g1_i4","SCP20_ARATH^SCP20_ARATH^Q:2132-984,H:31-416^65.37%ID^E:5e-178^RecName: Full=Serine carboxypeptidase-like 20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SCP20_ARATH^SCP20_ARATH^Q:373-248,H:456-497^83.33%ID^E:8e-13^RecName: Full=Serine carboxypeptidase-like 20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SCP20_ARATH^SCP20_ARATH^Q:850-731,H:417-456^77.5%ID^E:3e-12^RecName: Full=Serine carboxypeptidase-like 20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43164_c0_g1_i4.p1","954-2216[-]","SCP20_ARATH^SCP20_ARATH^Q:10-411,H:12-416^63.55%ID^E:0^RecName: Full=Serine carboxypeptidase-like 20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^37-412^E:1e-108","sigP:1^26^0.906^YES",".","COG2939^carboxy-peptidase","KEGG:ath:AT4G12910`KO:K16296","GO:0005576^cellular_component^extracellular region`GO:0005777^cellular_component^peroxisome`GO:0005773^cellular_component^vacuole`GO:0004180^molecular_function^carboxypeptidase activity`GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0019748^biological_process^secondary metabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN42676_c0_g1","leaves S. yangii","roots S. yangii",5.04067609092522,0,0,"TRINITY_DN42676_c0_g1_i10","Y2104_ARATH^Y2104_ARATH^Q:458-1189,H:72-316^73.06%ID^E:6e-126^RecName: Full=Uncharacterized methyltransferase At2g41040, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2104_ARATH^Y2104_ARATH^Q:1368-1493,H:311-352^52.38%ID^E:7e-07^RecName: Full=Uncharacterized methyltransferase At2g41040, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42676_c0_g1_i10.p1","284-1267[+]","Y2104_ARATH^Y2104_ARATH^Q:36-308,H:44-323^66.79%ID^E:3e-131^RecName: Full=Uncharacterized methyltransferase At2g41040, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01209.15^Ubie_methyltran^ubiE/COQ5 methyltransferase family^168-283^E:2e-10`PF13489.3^Methyltransf_23^Methyltransferase domain^169-286^E:3.3e-08`PF13847.3^Methyltransf_31^Methyltransferase domain^173-278^E:4.9e-09`PF08241.9^Methyltransf_11^Methyltransferase domain^176-276^E:7.7e-20`PF13649.3^Methyltransf_25^Methyltransferase domain^176-273^E:1e-15`PF08242.9^Methyltransf_12^Methyltransferase domain^176-275^E:1.3e-07",".",".","COG2226^Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2)","KEGG:ath:AT2G41040","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0008168^molecular_function^methyltransferase activity`GO:0080167^biological_process^response to karrikin","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46595_c1_g2","leaves S. yangii","roots S. yangii",5.02209360916949,0,0,"TRINITY_DN46595_c1_g2_i2","TRXM4_ARATH^TRXM4_ARATH^Q:799-272,H:1-191^53.65%ID^E:4e-61^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46595_c1_g2_i2.p1","269-799[-]","TRXM4_ARATH^TRXM4_ARATH^Q:1-176,H:1-191^53.65%ID^E:7e-63^RecName: Full=Thioredoxin M4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^75-173^E:5.2e-32`PF13098.3^Thioredoxin_2^Thioredoxin-like domain^90-170^E:5e-08`PF14595.3^Thioredoxin_9^Thioredoxin^96-166^E:1.4e-08",".",".","COG0526^Thioredoxin","KEGG:ath:AT3G15360`KO:K03671","GO:0005618^cellular_component^cell wall`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0008047^molecular_function^enzyme activator activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0043086^biological_process^negative regulation of catalytic activity`GO:0055114^biological_process^oxidation-reduction process`GO:0043085^biological_process^positive regulation of catalytic activity`GO:0006457^biological_process^protein folding`GO:0006109^biological_process^regulation of carbohydrate metabolic process`GO:0009735^biological_process^response to cytokinin`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN45547_c2_g1","leaves S. yangii","roots S. yangii",5.01291591203156,0,0,"TRINITY_DN45547_c2_g1_i8","Y4554_ARATH^Y4554_ARATH^Q:2091-1771,H:39-145^59.81%ID^E:1e-27^RecName: Full=Uncharacterized protein At4g15545;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45547_c2_g1_i8.p3","1708-2166[-]","Y4554_ARATH^Y4554_ARATH^Q:6-132,H:19-145^62.2%ID^E:9e-43^RecName: Full=Uncharacterized protein At4g15545;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111Y4K^NA","KEGG:ath:AT4G15545","GO:0016021^cellular_component^integral component of membrane`GO:0022857^molecular_function^transmembrane transporter activity",".",".","."]
["TRINITY_DN43980_c0_g1","leaves S. yangii","roots S. yangii",5.00487578470866,0,0,"TRINITY_DN43980_c0_g1_i1","ANTR6_ARATH^ANTR6_ARATH^Q:328-1884,H:2-516^67.23%ID^E:0^RecName: Full=Probable anion transporter 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43980_c0_g1_i1.p1","322-1887[+]","ANTR6_ARATH^ANTR6_ARATH^Q:3-521,H:2-516^67.23%ID^E:0^RecName: Full=Probable anion transporter 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^107-473^E:1.9e-53",".",".","ENOG4110NNA^Major Facilitator Superfamily","KEGG:ath:AT5G20380","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009536^cellular_component^plastid`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0098656^biological_process^anion transmembrane transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46723_c1_g1","leaves S. yangii","roots S. yangii",4.99786318064595,0,0,"TRINITY_DN46723_c1_g1_i3","C71A6_NEPRA^C71A6_NEPRA^Q:673-8,H:11-240^73.39%ID^E:4e-99^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta",".","TRINITY_DN46723_c1_g1_i3.p1","2-676[-]","C71A6_NEPRA^C71A6_NEPRA^Q:2-223,H:11-240^73.39%ID^E:3e-106^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta","PF00067.19^p450^Cytochrome P450^22-212^E:1.8e-28",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46952_c1_g1","leaves S. yangii","roots S. yangii",4.99668029020619,0,0,"TRINITY_DN46952_c1_g1_i3","PLT5_ARATH^PLT5_ARATH^Q:1811-306,H:22-515^68.39%ID^E:0^RecName: Full=Polyol transporter 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46952_c1_g1_i3.p1","294-1853[-]","PLT5_ARATH^PLT5_ARATH^Q:15-516,H:22-515^68.39%ID^E:0^RecName: Full=Polyol transporter 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^33-491^E:6.3e-111`PF07690.13^MFS_1^Major Facilitator Superfamily^39-437^E:2.9e-27",".",".","ENOG410XNQK^Transporter","KEGG:ath:AT3G18830","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0015591^molecular_function^D-ribose transmembrane transporter activity`GO:0015148^molecular_function^D-xylose transmembrane transporter activity`GO:0005354^molecular_function^galactose transmembrane transporter activity`GO:0005355^molecular_function^glucose transmembrane transporter activity`GO:0015168^molecular_function^glycerol transmembrane transporter activity`GO:0015575^molecular_function^mannitol transmembrane transporter activity`GO:0015145^molecular_function^monosaccharide transmembrane transporter activity`GO:0005365^molecular_function^myo-inositol transmembrane transporter activity`GO:0015576^molecular_function^sorbitol transmembrane transporter activity`GO:0005351^molecular_function^sugar:proton symporter activity`GO:0015752^biological_process^D-ribose transport`GO:0015753^biological_process^D-xylose transport`GO:0015757^biological_process^galactose transport`GO:0046323^biological_process^glucose import`GO:1904659^biological_process^glucose transmembrane transport`GO:0015793^biological_process^glycerol transport`GO:0010311^biological_process^lateral root formation`GO:0015797^biological_process^mannitol transport`GO:0015798^biological_process^myo-inositol transport`GO:0015992^biological_process^proton transport`GO:0015795^biological_process^sorbitol transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN43795_c0_g1","leaves S. yangii","roots S. yangii",4.99520107976929,0,0,"TRINITY_DN43795_c0_g1_i2","SR54C_ARATH^SR54C_ARATH^Q:1579-533,H:215-564^84.57%ID^E:0^RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43795_c0_g1_i2.p1","530-1432[-]","SR54C_ARATH^SR54C_ARATH^Q:1-300,H:264-564^88.04%ID^E:0^RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00448.19^SRP54^SRP54-type protein, GTPase domain^1-108^E:2.6e-39`PF02978.16^SRP_SPB^Signal peptide binding domain^139-237^E:6.3e-26",".",".","COG0541^Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY","KEGG:ath:AT5G03940`KO:K03106","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0080085^cellular_component^signal recognition particle, chloroplast targeting`GO:0005786^cellular_component^signal recognition particle, endoplasmic reticulum targeting`GO:0008312^molecular_function^7S RNA binding`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0006614^biological_process^SRP-dependent cotranslational protein targeting to membrane","GO:0005525^molecular_function^GTP binding`GO:0006614^biological_process^SRP-dependent cotranslational protein targeting to membrane`GO:0008312^molecular_function^7S RNA binding`GO:0048500^cellular_component^signal recognition particle",".","."]
["TRINITY_DN46193_c5_g2","leaves S. yangii","roots S. yangii",4.96972320815002,0,0,"TRINITY_DN46193_c5_g2_i2","Y4141_ARATH^Y4141_ARATH^Q:131-529,H:24-155^67.67%ID^E:5e-57^RecName: Full=Uncharacterized protein At4g14100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46193_c5_g2_i2.p1","2-535[+]","Y4141_ARATH^Y4141_ARATH^Q:27-176,H:6-155^61.59%ID^E:2e-61^RecName: Full=Uncharacterized protein At4g14100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^44^0.58^YES",".","ENOG4111MP0^NA","KEGG:ath:AT4G14100","GO:0005773^cellular_component^vacuole",".",".","."]
["TRINITY_DN47357_c0_g1","leaves S. yangii","roots S. yangii",4.96546045519655,0,0,"TRINITY_DN47357_c0_g1_i1","RK12_TOBAC^RK12_TOBAC^Q:704-309,H:27-157^77.27%ID^E:3e-45^RecName: Full=50S ribosomal protein L12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47357_c0_g1_i1.p1","219-779[-]","RK12_NICSY^RK12_NICSY^Q:1-185,H:1-185^74.73%ID^E:1e-73^RecName: Full=50S ribosomal protein L12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF16320.2^Ribosomal_L12_N^Ribosomal protein L7/L12 dimerisation domain^61-108^E:1.3e-13`PF00542.16^Ribosomal_L12^Ribosomal protein L7/L12 C-terminal domain^119-185^E:1.7e-22",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44139_c2_g4","leaves S. yangii","roots S. yangii",4.93075345617657,0,0,"TRINITY_DN44139_c2_g4_i2","STR16_ARATH^STR16_ARATH^Q:388-80,H:16-118^60.19%ID^E:6e-42^RecName: Full=Thiosulfate sulfurtransferase 16, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44139_c2_g4_i2.p1","71-622[-]","STR15_ARATH^STR15_ARATH^Q:70-183,H:69-182^61.4%ID^E:4e-48^RecName: Full=Rhodanese-like domain-containing protein 15, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00581.17^Rhodanese^Rhodanese-like domain^84-176^E:1.5e-13",".",".","COG0607^Rhodanese domain protein","KEGG:ath:AT4G35770","GO:0009507^cellular_component^chloroplast`GO:0009579^cellular_component^thylakoid`GO:0007568^biological_process^aging`GO:0009753^biological_process^response to jasmonic acid`GO:0006979^biological_process^response to oxidative stress`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN128059_c0_g1","leaves S. yangii","roots S. yangii",4.92113219066634,"0.00997769123721003","0.0130941870673547","TRINITY_DN128059_c0_g1_i1","GLR27_ARATH^GLR27_ARATH^Q:368-3,H:485-601^45.08%ID^E:7e-30^RecName: Full=Glutamate receptor 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN128059_c0_g1_i1.p1","3-371[-]","GLR27_ARATH^GLR27_ARATH^Q:2-123,H:485-601^45.08%ID^E:6e-30^RecName: Full=Glutamate receptor 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10613.6^Lig_chan-Glu_bd^Ligated ion channel L-glutamate- and glycine-binding site^4-87^E:2.8e-13`PF00497.17^SBP_bac_3^Bacterial extracellular solute-binding proteins, family 3^5-92^E:7.7e-09",".",".","ENOG410XQQV^glutamate receptor","KEGG:ath:AT2G29120","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0005262^molecular_function^calcium channel activity`GO:0008066^molecular_function^glutamate receptor activity`GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0019722^biological_process^calcium-mediated signaling`GO:0071230^biological_process^cellular response to amino acid stimulus","GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0005234^molecular_function^extracellular-glutamate-gated ion channel activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46033_c3_g1","leaves S. yangii","roots S. yangii",4.91966882277119,0,0,"TRINITY_DN46033_c3_g1_i1","RR6_ARATH^RR6_ARATH^Q:1038-493,H:18-205^63.49%ID^E:4e-62^RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46033_c3_g1_i1.p1","484-1077[-]","RR6_ARATH^RR6_ARATH^Q:14-195,H:18-205^63.49%ID^E:3e-70^RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01250.14^Ribosomal_S6^Ribosomal protein S6^92-190^E:1.4e-17",".",".","ENOG4111S82^ribosomal protein S6","KEGG:ath:AT1G64510`KO:K02990","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005840^cellular_component^ribosome`GO:0009579^cellular_component^thylakoid`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0019843^molecular_function^rRNA binding`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN41439_c0_g1","leaves S. yangii","roots S. yangii",4.91727030794624,0,0,"TRINITY_DN41439_c0_g1_i2","PNSB3_ARATH^PNSB3_ARATH^Q:1358-1194,H:79-133^50%ID^E:1e-06^RecName: Full=Photosynthetic NDH subunit of subcomplex B 3, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41439_c0_g1_i2.p1","1188-1538[-]","PNSB3_ARATH^PNSB3_ARATH^Q:5-115,H:20-133^38.46%ID^E:2e-11^RecName: Full=Photosynthetic NDH subunit of subcomplex B 3, chloroplastic {ECO:0000303|PubMed:21785130};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00111.24^Fer2^2Fe-2S iron-sulfur cluster binding domain^99-116^E:0.00065",".",".","COG0633^Ferredoxin","KEGG:ath:AT3G16250","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010598^cellular_component^NAD(P)H dehydrogenase complex (plastoquinone)`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0046872^molecular_function^metal ion binding`GO:0009773^biological_process^photosynthetic electron transport in photosystem I`GO:0006810^biological_process^transport","GO:0009055^molecular_function^electron carrier activity`GO:0051536^molecular_function^iron-sulfur cluster binding",".","."]
["TRINITY_DN47747_c1_g1","leaves S. yangii","roots S. yangii",4.91065676151817,0,0,"TRINITY_DN47747_c1_g1_i3","FEI2_ARATH^FEI2_ARATH^Q:706-497,H:25-90^38.89%ID^E:4e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase FEI 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FEI2_ARATH^FEI2_ARATH^Q:434-336,H:113-145^39.39%ID^E:4e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase FEI 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47747_c1_g1_i3.p1","3-608[-]","EFR_ARATH^EFR_ARATH^Q:29-202,H:132-302^34.66%ID^E:5e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:30-145,H:85-198^33.62%ID^E:8e-06^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^42-56^E:0.022`PF13516.3^LRR_6^Leucine Rich repeat^90-105^E:1.2`PF13516.3^LRR_6^Leucine Rich repeat^140-155^E:1.2",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G20480`KO:K13428","GO:0012505^cellular_component^endomembrane system`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0019199^molecular_function^transmembrane receptor protein kinase activity`GO:0010204^biological_process^defense response signaling pathway, resistance gene-independent`GO:0016045^biological_process^detection of bacterium`GO:0002764^biological_process^immune response-regulating signaling pathway`GO:0009626^biological_process^plant-type hypersensitive response`GO:0010359^biological_process^regulation of anion channel activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN37645_c0_g1","leaves S. yangii","roots S. yangii",4.8921046509098,0,0,"TRINITY_DN37645_c0_g1_i1","RR10_MESCR^RR10_MESCR^Q:272-679,H:58-197^84.29%ID^E:5e-80^RecName: Full=30S ribosomal protein S10, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum",".","TRINITY_DN37645_c0_g1_i1.p1","128-682[+]","RR10_MESCR^RR10_MESCR^Q:5-184,H:3-197^68.21%ID^E:2e-82^RecName: Full=30S ribosomal protein S10, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum","PF00338.19^Ribosomal_S10^Ribosomal protein S10p/S20e^89-183^E:3.2e-33",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN40237_c0_g1","leaves S. yangii","roots S. yangii",4.86205063793986,0,0,"TRINITY_DN40237_c0_g1_i1","TRXF_BRANA^TRXF_BRANA^Q:302-622,H:71-177^85.05%ID^E:4e-62^RecName: Full=Thioredoxin F-type, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN40237_c0_g1_i1.p1","89-628[+]","TRXF_ORYSJ^TRXF_ORYSJ^Q:65-179,H:73-187^79.13%ID^E:4e-64^RecName: Full=Thioredoxin F, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00085.17^Thioredoxin^Thioredoxin^74-174^E:8.8e-24`PF13098.3^Thioredoxin_2^Thioredoxin-like domain^90-164^E:2e-06",".",".","COG0526^Thioredoxin","KEGG:osa:4324320","GO:0009507^cellular_component^chloroplast`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0055114^biological_process^oxidation-reduction process`GO:0006457^biological_process^protein folding`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN44136_c0_g1","leaves S. yangii","roots S. yangii",4.85796906006999,0,0,"TRINITY_DN44136_c0_g1_i2","PRPX_HORVU^PRPX_HORVU^Q:865-155,H:1-234^51.46%ID^E:3e-78^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN44136_c0_g1_i2.p1","149-865[-]","PRPX_HORVU^PRPX_HORVU^Q:1-237,H:1-234^51.46%ID^E:4e-80^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".",".",".","ENOG410YA3P^NA",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN45789_c1_g1","leaves S. yangii","roots S. yangii",4.85695593100964,0,0,"TRINITY_DN45789_c1_g1_i5","C94A2_VICSA^C94A2_VICSA^Q:1717-263,H:16-510^60.84%ID^E:0^RecName: Full=Cytochrome P450 94A2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Vicia",".","TRINITY_DN45789_c1_g1_i5.p1","260-1765[-]","C94A2_VICSA^C94A2_VICSA^Q:17-501,H:16-510^61.45%ID^E:0^RecName: Full=Cytochrome P450 94A2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Vicia","PF00067.19^p450^Cytochrome P450^77-477^E:1.1e-64",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN40553_c0_g1","leaves S. yangii","roots S. yangii",4.84182198001801,0,0,"TRINITY_DN40553_c0_g1_i1","RK19_SPIOL^RK19_SPIOL^Q:319-807,H:71-233^68.71%ID^E:8e-71^RecName: Full=50S ribosomal protein L19, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN40553_c0_g1_i1.p1","145-810[+]","RK192_ARATH^RK192_ARATH^Q:2-221,H:4-229^62.17%ID^E:2e-77^RecName: Full=50S ribosomal protein L19-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01245.17^Ribosomal_L19^Ribosomal protein L19^117-214^E:7.5e-32",".",".","COG0335^This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (By similarity)","KEGG:ath:AT5G47190`KO:K02884","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45715_c2_g1","leaves S. yangii","roots S. yangii",4.84025685584191,0,0,"TRINITY_DN45715_c2_g1_i4","GPAT6_ARATH^GPAT6_ARATH^Q:1684-2565,H:201-494^80.95%ID^E:3e-157^RecName: Full=Glycerol-3-phosphate 2-O-acyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GPAT6_ARATH^GPAT6_ARATH^Q:298-912,H:9-216^71.15%ID^E:6e-88^RecName: Full=Glycerol-3-phosphate 2-O-acyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45715_c2_g1_i4.p1","1729-2610[+]","GPAT6_ARATH^GPAT6_ARATH^Q:1-285,H:216-500^82.81%ID^E:6e-162^RecName: Full=Glycerol-3-phosphate 2-O-acyltransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01553.18^Acyltransferase^Acyltransferase^89-189^E:3.2e-08",".",".","ENOG4110PXU^glycerol-3-phosphate acyltransferase","KEGG:ath:AT2G38110`KO:K13508","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0090447^molecular_function^glycerol-3-phosphate 2-O-acyltransferase activity`GO:0016791^molecular_function^phosphatase activity`GO:0010143^biological_process^cutin biosynthetic process`GO:0016311^biological_process^dephosphorylation`GO:0009908^biological_process^flower development`GO:0008654^biological_process^phospholipid biosynthetic process","GO:0016746^molecular_function^transferase activity, transferring acyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN5084_c0_g1","leaves S. yangii","roots S. yangii",4.83395046831728,0,0,"TRINITY_DN5084_c0_g1_i2","CHLI_TOBAC^CHLI_TOBAC^Q:1391-360,H:83-426^92.44%ID^E:0^RecName: Full=Magnesium-chelatase subunit ChlI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN5084_c0_g1_i2.p1","357-1337[-]","CHLI_TOBAC^CHLI_TOBAC^Q:1-326,H:101-426^92.64%ID^E:0^RecName: Full=Magnesium-chelatase subunit ChlI, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01078.18^Mg_chelatase^Magnesium chelatase, subunit ChlI^102-172^E:1.4e-07`PF00493.20^MCM^MCM2/3/5 family^102-261^E:6.3e-06",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0016851^molecular_function^magnesium chelatase activity`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0015979^biological_process^photosynthesis","GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0006260^biological_process^DNA replication",".","."]
["TRINITY_DN38201_c0_g1","leaves S. yangii","roots S. yangii",4.81747082434347,0,0,"TRINITY_DN38201_c0_g1_i2","RK34_ARATH^RK34_ARATH^Q:702-484,H:85-157^79.45%ID^E:2e-28^RecName: Full=50S ribosomal protein L34, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38201_c0_g1_i2.p1","481-942[-]","RK34_ARATH^RK34_ARATH^Q:51-153,H:56-157^67.31%ID^E:1e-34^RecName: Full=50S ribosomal protein L34, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00468.14^Ribosomal_L34^Ribosomal protein L34^108-142^E:8.6e-13",".",".","ENOG410Y1JV^ribosomal protein l34","KEGG:ath:AT1G29070`KO:K02914","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46873_c0_g3","leaves S. yangii","roots S. yangii",4.8031098012339,0,0,"TRINITY_DN46873_c0_g3_i1","PTR9_ARATH^PTR9_ARATH^Q:146-1705,H:19-550^55.25%ID^E:2e-150^RecName: Full=Protein NRT1/ PTR FAMILY 5.10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46873_c0_g3_i1.p1","71-1729[+]","PTR9_ARATH^PTR9_ARATH^Q:26-545,H:19-550^55.25%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 5.10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^109-502^E:1.5e-79",".",".","COG3104^transporter","KEGG:ath:AT1G22540","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006857^biological_process^oligopeptide transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN43908_c1_g5","leaves S. yangii","roots S. yangii",4.80055201873614,0,0,"TRINITY_DN43908_c1_g5_i2","RK27_TOBAC^RK27_TOBAC^Q:2186-1998,H:33-95^82.54%ID^E:9e-24^RecName: Full=50S ribosomal protein L27, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`RK27_TOBAC^RK27_TOBAC^Q:535-377,H:93-145^88.68%ID^E:9e-24^RecName: Full=50S ribosomal protein L27, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43908_c1_g5_i2.p2","1968-2294[-]","RK27_TOBAC^RK27_TOBAC^Q:4-98,H:1-94^72.92%ID^E:5e-32^RecName: Full=50S ribosomal protein L27, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01016.16^Ribosomal_L27^Ribosomal L27 protein^56-99^E:7.3e-19",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44502_c3_g1","leaves S. yangii","roots S. yangii",4.79380704344371,0,0,"TRINITY_DN44502_c3_g1_i2","F16P2_SPIOL^F16P2_SPIOL^Q:665-1675,H:1-337^91.39%ID^E:0^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN44502_c3_g1_i2.p1","665-1687[+]","F16P2_SOLTU^F16P2_SOLTU^Q:1-340,H:1-340^90%ID^E:0^RecName: Full=Fructose-1,6-bisphosphatase, cytosolic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00316.17^FBPase^Fructose-1-6-bisphosphatase, N-terminal domain^13-201^E:2.7e-80",".",".","COG0158^D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1","KEGG:sot:102588954`KO:K03841","GO:0005737^cellular_component^cytoplasm`GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0046872^molecular_function^metal ion binding`GO:0005975^biological_process^carbohydrate metabolic process","GO:0042132^molecular_function^fructose 1,6-bisphosphate 1-phosphatase activity`GO:0042578^molecular_function^phosphoric ester hydrolase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47078_c6_g1","leaves S. yangii","roots S. yangii",4.76272992059993,0,0,"TRINITY_DN47078_c6_g1_i12","GLTB_SPIOL^GLTB_SPIOL^Q:3226-110,H:372-1410^87.97%ID^E:0^RecName: Full=Ferredoxin-dependent glutamate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia`GLTB_SPIOL^GLTB_SPIOL^Q:4143-4033,H:340-376^91.89%ID^E:2e-12^RecName: Full=Ferredoxin-dependent glutamate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN47078_c6_g1_i12.p1","107-3280[-]","GLTB_SPIOL^GLTB_SPIOL^Q:19-1057,H:372-1410^87.97%ID^E:0^RecName: Full=Ferredoxin-dependent glutamate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00310.18^GATase_2^Glutamine amidotransferases class-II^20-70^E:1.3e-11`PF04898.11^Glu_syn_central^Glutamate synthase central domain^96-389^E:1.3e-106`PF01645.14^Glu_synthase^Conserved region in glutamate synthase^449-832^E:4.6e-159`PF01493.16^GXGXG^GXGXG motif^914-1057^E:1.3e-58",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0051538^molecular_function^3 iron, 4 sulfur cluster binding`GO:0016041^molecular_function^glutamate synthase (ferredoxin) activity`GO:0046872^molecular_function^metal ion binding`GO:0006541^biological_process^glutamine metabolic process`GO:0097054^biological_process^L-glutamate biosynthetic process","GO:0015930^molecular_function^glutamate synthase activity`GO:0006807^biological_process^nitrogen compound metabolic process`GO:0055114^biological_process^oxidation-reduction process`GO:0016638^molecular_function^oxidoreductase activity, acting on the CH-NH2 group of donors`GO:0006537^biological_process^glutamate biosynthetic process`GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44226_c6_g6","leaves S. yangii","roots S. yangii",4.75935727721267,0,0,"TRINITY_DN44226_c6_g6_i1","ALFC2_ARATH^ALFC2_ARATH^Q:443-988,H:217-398^88.46%ID^E:2e-113^RecName: Full=Probable fructose-bisphosphate aldolase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALFC2_ARATH^ALFC2_ARATH^Q:2-82,H:190-216^100%ID^E:1e-07^RecName: Full=Probable fructose-bisphosphate aldolase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44226_c6_g6_i1.p1","602-991[+]","ALFC2_ARATH^ALFC2_ARATH^Q:1-129,H:270-398^89.15%ID^E:9e-78^RecName: Full=Probable fructose-bisphosphate aldolase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00274.16^Glycolytic^Fructose-bisphosphate aldolase class-I^1-129^E:1.7e-52",".",".","COG3588^fructose-bisphosphate aldolase","KEGG:ath:AT4G38970`KO:K01623","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process`GO:0009737^biological_process^response to abscisic acid`GO:0046686^biological_process^response to cadmium ion","GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN40092_c0_g1","leaves S. yangii","roots S. yangii",4.75770541228517,0,0,"TRINITY_DN40092_c0_g1_i6","MCAT_ARATH^MCAT_ARATH^Q:884-321,H:118-300^73.94%ID^E:6e-76^RecName: Full=Mitochondrial carnitine/acylcarnitine carrier-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MCAT_ARATH^MCAT_ARATH^Q:1327-935,H:1-131^81.68%ID^E:4e-56^RecName: Full=Mitochondrial carnitine/acylcarnitine carrier-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MCAT_ARATH^MCAT_ARATH^Q:767-342,H:45-196^30.38%ID^E:1e-07^RecName: Full=Mitochondrial carnitine/acylcarnitine carrier-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40092_c0_g1_i6.p2","899-1327[-]","MCAT_ARATH^MCAT_ARATH^Q:1-131,H:1-131^81.68%ID^E:1e-70^RecName: Full=Mitochondrial carnitine/acylcarnitine carrier-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MCAT_ARATH^MCAT_ARATH^Q:8-84,H:217-289^37.66%ID^E:4e-07^RecName: Full=Mitochondrial carnitine/acylcarnitine carrier-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00153.24^Mito_carr^Mitochondrial carrier protein^4-94^E:1.5e-17",".",".","ENOG410XS86^Solute carrier family 25","KEGG:ath:AT5G46800`KO:K15109","GO:0009507^cellular_component^chloroplast`GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006839^biological_process^mitochondrial transport`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN45977_c0_g4","leaves S. yangii","roots S. yangii",4.75431859977209,0,0,"TRINITY_DN45977_c0_g4_i1","ARASP_ARATH^ARASP_ARATH^Q:396-1568,H:58-445^73.4%ID^E:1e-171^RecName: Full=Membrane metalloprotease ARASP, chloroplastic {ECO:0000303|PubMed:16413549};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45977_c0_g4_i1.p1","243-1577[+]","ARASP_ARATH^ARASP_ARATH^Q:1-444,H:1-447^68.21%ID^E:0^RecName: Full=Membrane metalloprotease ARASP, chloroplastic {ECO:0000303|PubMed:16413549};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02163.19^Peptidase_M50^Peptidase family M50^89-425^E:1.1e-58`PF13180.3^PDZ_2^PDZ domain^204-279^E:7.8e-07",".",".","COG0750^Membrane-associated zinc metalloprotease","KEGG:ath:AT2G32480","GO:0009507^cellular_component^chloroplast`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0046872^molecular_function^metal ion binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0009658^biological_process^chloroplast organization","GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006508^biological_process^proteolysis`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN28764_c0_g1","leaves S. yangii","roots S. yangii",4.75161338564912,0,0,"TRINITY_DN28764_c0_g1_i1","SIGB_ARATH^SIGB_ARATH^Q:1374-283,H:207-570^79.4%ID^E:0^RecName: Full=RNA polymerase sigma factor sigB;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28764_c0_g1_i1.p1","280-2109[-]","SIGB_ARATH^SIGB_ARATH^Q:2-609,H:3-570^58.04%ID^E:0^RecName: Full=RNA polymerase sigma factor sigB;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04542.11^Sigma70_r2^Sigma-70 region 2^375-445^E:1.6e-17`PF04539.13^Sigma70_r3^Sigma-70 region 3^454-529^E:2.7e-18`PF04545.13^Sigma70_r4^Sigma-70, region 4^543-595^E:3.5e-19",".",".","COG0568^Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)","KEGG:ath:AT1G08540","GO:0009507^cellular_component^chloroplast`GO:0003677^molecular_function^DNA binding`GO:0001053^molecular_function^plastid sigma factor activity`GO:0016987^molecular_function^sigma factor activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071482^biological_process^cellular response to light stimulus`GO:0009658^biological_process^chloroplast organization`GO:0006352^biological_process^DNA-templated transcription, initiation`GO:2001141^biological_process^regulation of RNA biosynthetic process`GO:0010114^biological_process^response to red light`GO:0006399^biological_process^tRNA metabolic process","GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0016987^molecular_function^sigma factor activity`GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN42968_c0_g1","leaves S. yangii","roots S. yangii",4.75027514280251,0,0,"TRINITY_DN42968_c0_g1_i3","CRTI_SOLLC^CRTI_SOLLC^Q:388-1251,H:118-386^22.82%ID^E:2e-09^RecName: Full=Phytoene dehydrogenase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN42968_c0_g1_i3.p1","253-1278[+]","PDS_CAPAN^PDS_CAPAN^Q:41-333,H:112-385^21.78%ID^E:6e-10^RecName: Full=15-cis-phytoene desaturase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum","PF01266.21^DAO^FAD dependent oxidoreductase^41-93^E:8.7e-06`PF00890.21^FAD_binding_2^FAD binding domain^42-75^E:1.9e-05`PF13450.3^NAD_binding_8^NAD(P)-binding Rossmann-like domain^44-105^E:4.2e-09`PF01593.21^Amino_oxidase^Flavin containing amine oxidoreductase^50-223^E:7.4e-06",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0009509^cellular_component^chromoplast`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0009635^biological_process^response to herbicide","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44226_c6_g5","leaves S. yangii","roots S. yangii",4.74641664461468,0,0,"TRINITY_DN44226_c6_g5_i1","ALFC_SPIOL^ALFC_SPIOL^Q:600-1,H:1-195^82.5%ID^E:1e-107^RecName: Full=Fructose-bisphosphate aldolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN44226_c6_g5_i1.p1","1-600[-]","ALFC_SPIOL^ALFC_SPIOL^Q:1-200,H:1-195^82.5%ID^E:1e-110^RecName: Full=Fructose-bisphosphate aldolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00274.16^Glycolytic^Fructose-bisphosphate aldolase class-I^57-197^E:1.8e-62",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process","GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN38041_c0_g1","leaves S. yangii","roots S. yangii",4.74104948555412,0,0,"TRINITY_DN38041_c0_g1_i1","MFP1_TOBAC^MFP1_TOBAC^Q:2418-292,H:27-713^47.96%ID^E:0^RecName: Full=MAR-binding filament-like protein 1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN38041_c0_g1_i1.p1","271-2460[-]","MFP1_TOBAC^MFP1_TOBAC^Q:15-723,H:27-713^47.96%ID^E:0^RecName: Full=MAR-binding filament-like protein 1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".",".",".",".",".","GO:0016363^cellular_component^nuclear matrix`GO:0003677^molecular_function^DNA binding",".",".","."]
["TRINITY_DN45792_c0_g1","leaves S. yangii","roots S. yangii",4.72969825145669,0,0,"TRINITY_DN45792_c0_g1_i14","HCAR_ARATH^HCAR_ARATH^Q:1594-2094,H:290-462^72.83%ID^E:4e-79^RecName: Full=7-hydroxymethyl chlorophyll a reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HCAR_ARATH^HCAR_ARATH^Q:818-892,H:279-303^76%ID^E:2e-06^RecName: Full=7-hydroxymethyl chlorophyll a reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HCAR_ARATH^HCAR_ARATH^Q:690-731,H:268-281^85.71%ID^E:2e-06^RecName: Full=7-hydroxymethyl chlorophyll a reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45792_c0_g1_i14.p1","1657-2097[+]","HCAR_ARATH^HCAR_ARATH^Q:1-146,H:317-462^80.82%ID^E:1e-83^RecName: Full=7-hydroxymethyl chlorophyll a reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1035^Coenzyme F420 hydrogenase","KEGG:ath:AT1G04620`KO:K18010","GO:0009507^cellular_component^chloroplast`GO:0090415^molecular_function^7-hydroxymethyl chlorophyll a reductase activity`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0046872^molecular_function^metal ion binding`GO:0033354^biological_process^chlorophyll cycle`GO:0015994^biological_process^chlorophyll metabolic process",".",".","."]
["TRINITY_DN47584_c1_g8","leaves S. yangii","roots S. yangii",4.72886484200971,0,0,"TRINITY_DN47584_c1_g8_i1","ASE2_ARATH^ASE2_ARATH^Q:538-1977,H:76-560^85.36%ID^E:0^RecName: Full=Amidophosphoribosyltransferase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47584_c1_g8_i1.p1","328-2049[+]","ASE2_ARATH^ASE2_ARATH^Q:71-550,H:76-560^85.36%ID^E:0^RecName: Full=Amidophosphoribosyltransferase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13522.3^GATase_6^Glutamine amidotransferase domain^144-275^E:6.6e-20`PF13230.3^GATase_4^Glutamine amidotransferases class-II^145-192^E:1.1e-05`PF13537.3^GATase_7^Glutamine amidotransferase domain^162-279^E:1.9e-23`PF00156.24^Pribosyltran^Phosphoribosyl transferase domain^341-451^E:1.3e-09",".",".","COG0034^glutamine phosphoribosylpyrophosphate amidotransferase","KEGG:ath:AT4G34740`KO:K00764","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009532^cellular_component^plastid stroma`GO:0004044^molecular_function^amidophosphoribosyltransferase activity`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0046872^molecular_function^metal ion binding`GO:0006189^biological_process^'de novo' IMP biosynthetic process`GO:0009658^biological_process^chloroplast organization`GO:0006541^biological_process^glutamine metabolic process`GO:0009116^biological_process^nucleoside metabolic process`GO:0009113^biological_process^purine nucleobase biosynthetic process`GO:0006164^biological_process^purine nucleotide biosynthetic process","GO:0009116^biological_process^nucleoside metabolic process",".","."]
["TRINITY_DN47241_c1_g1","leaves S. yangii","roots S. yangii",4.6969639060195,0,0,"TRINITY_DN47241_c1_g1_i19","GSO1_ARATH^GSO1_ARATH^Q:349-1563,H:76-501^34.4%ID^E:1e-40^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:7-1566,H:255-765^31.45%ID^E:2e-40^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:7-1410,H:424-834^27.82%ID^E:1e-28^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:931-1566,H:71-261^28.5%ID^E:1e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:4-735,H:662-889^26.07%ID^E:6e-08^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47241_c1_g1_i19.p1","1-1566[+]","GSO2_ARATH^GSO2_ARATH^Q:3-522,H:232-766^31.74%ID^E:3e-48^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:23-522,H:132-670^29.91%ID^E:3e-44^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:13-492,H:339-833^29.42%ID^E:1e-37^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:147-521,H:130-526^31.04%ID^E:5e-35^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:3-214,H:616-846^27.66%ID^E:4e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:394-521,H:87-213^37.5%ID^E:1e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:405-522,H:73-190^35.83%ID^E:3e-06^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^12-67^E:2.8e-09`PF00560.30^LRR_1^Leucine Rich Repeat^164-184^E:0.29`PF13855.3^LRR_8^Leucine rich repeat^239-299^E:1.1e-08`PF00560.30^LRR_1^Leucine Rich Repeat^288-305^E:0.96`PF00560.30^LRR_1^Leucine Rich Repeat^429-449^E:0.18`PF13516.3^LRR_6^Leucine Rich repeat^429-443^E:0.37",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G44700","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0009553^biological_process^embryo sac development`GO:0090558^biological_process^plant epidermis development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46318_c3_g4","leaves S. yangii","roots S. yangii",4.69598887993809,0,0,"TRINITY_DN46318_c3_g4_i1","RR13_ARATH^RR13_ARATH^Q:627-289,H:42-154^85.84%ID^E:4e-65^RecName: Full=30S ribosomal protein S13, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46318_c3_g4_i1.p1","247-747[-]","RR13_ARATH^RR13_ARATH^Q:1-153,H:1-154^73.42%ID^E:1e-75^RecName: Full=30S ribosomal protein S13, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00416.19^Ribosomal_S13^Ribosomal protein S13/S18^48-152^E:4e-32",".",".","COG0099^Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45252_c1_g2","leaves S. yangii","roots S. yangii",4.68528763037377,0,0,"TRINITY_DN45252_c1_g2_i2","DTX25_ARATH^DTX25_ARATH^Q:195-1487,H:6-437^53.01%ID^E:5e-155^RecName: Full=Protein DETOXIFICATION 25 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45252_c1_g2_i2.p1","186-1502[+]","DTX24_ARATH^DTX24_ARATH^Q:13-434,H:16-440^55.29%ID^E:3e-162^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^54-201^E:4.4e-23`PF01554.15^MatE^MatE^264-422^E:1.7e-24",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT3G03620`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN25494_c0_g1","leaves S. yangii","roots S. yangii",4.6813026046843,0,0,"TRINITY_DN25494_c0_g1_i1","LTD_ARATH^LTD_ARATH^Q:212-601,H:46-175^80.77%ID^E:2e-74^RecName: Full=Protein LHCP TRANSLOCATION DEFECT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN25494_c0_g1_i1.p1","71-604[+]","LTD_ARATH^LTD_ARATH^Q:48-177,H:46-175^80.77%ID^E:5e-76^RecName: Full=Protein LHCP TRANSLOCATION DEFECT;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111Q7E^Involved in the import of light-harvesting complex proteins (LHCP) and subsequent routing of these proteins to the chloroplast signal recognition particle (SRP) pathway","KEGG:ath:AT1G50900","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0090391^biological_process^granum assembly`GO:0006886^biological_process^intracellular protein transport`GO:0080167^biological_process^response to karrikin",".",".","."]
["TRINITY_DN46302_c1_g10","leaves S. yangii","roots S. yangii",4.67818629113263,0,0,"TRINITY_DN46302_c1_g10_i4","RR7_ACOCL^RR7_ACOCL^Q:1729-2193,H:1-155^98.06%ID^E:2e-99^RecName: Full=30S ribosomal protein S7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Acoraceae; Acorus",".","TRINITY_DN46302_c1_g10_i4.p1","1729-2196[+]","RR7_ACOCL^RR7_ACOCL^Q:1-155,H:1-155^98.06%ID^E:1e-108^RecName: Full=30S ribosomal protein S7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Acoraceae; Acorus","PF00177.18^Ribosomal_S7^Ribosomal protein S7p/S5e^1-149^E:4.6e-52",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0015935^cellular_component^small ribosomal subunit`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN28558_c0_g1","leaves S. yangii","roots S. yangii",4.6772876000147,0,0,"TRINITY_DN28558_c0_g1_i1","RR21_SPIOL^RR21_SPIOL^Q:811-707,H:1-35^88.57%ID^E:7e-13^RecName: Full=30S ribosomal protein S21, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN28558_c0_g1_i1.p1","512-1054[-]","RR21_SPIOL^RR21_SPIOL^Q:82-116,H:1-35^88.57%ID^E:1e-12^RecName: Full=30S ribosomal protein S21, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF01165.17^Ribosomal_S21^Ribosomal protein S21^89-143^E:2e-19",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN43655_c1_g1","leaves S. yangii","roots S. yangii",4.67265131028645,0,0,"TRINITY_DN43655_c1_g1_i4","GALUR_FRAAN^GALUR_FRAAN^Q:1095-151,H:2-319^67.61%ID^E:7e-160^RecName: Full=D-galacturonate reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".","TRINITY_DN43655_c1_g1_i4.p1","148-1107[-]","GALUR_FRAAN^GALUR_FRAAN^Q:5-319,H:2-319^67.61%ID^E:5e-162^RecName: Full=D-galacturonate reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria","PF00248.18^Aldo_ket_red^Aldo/keto reductase family^22-293^E:2.2e-51",".",".",".","KEGG:ag:AAB97005","GO:0016491^molecular_function^oxidoreductase activity`GO:0019853^biological_process^L-ascorbic acid biosynthetic process",".",".","."]
["TRINITY_DN44010_c2_g5","leaves S. yangii","roots S. yangii",4.66565834848461,0,0,"TRINITY_DN44010_c2_g5_i1","CHI6_ORYSJ^CHI6_ORYSJ^Q:1041-355,H:39-271^55.13%ID^E:2e-87^RecName: Full=Chitinase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44010_c2_g5_i1.p1","352-1254[-]","CHI5_ARATH^CHI5_ARATH^Q:34-300,H:4-273^54.21%ID^E:1e-98^RecName: Full=Endochitinase EP3 {ECO:0000303|PubMed:11525512};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00182.16^Glyco_hydro_19^Chitinase class I^102-247^E:1e-43`PF00182.16^Glyco_hydro_19^Chitinase class I^255-300^E:3.8e-08",".",".","COG3979^chitinase","KEGG:ath:AT3G54420`KO:K01183","GO:0005618^cellular_component^cell wall`GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0016998^biological_process^cell wall macromolecule catabolic process`GO:0006032^biological_process^chitin catabolic process`GO:0006952^biological_process^defense response`GO:0000272^biological_process^polysaccharide catabolic process`GO:0009617^biological_process^response to bacterium`GO:0009611^biological_process^response to wounding`GO:0010262^biological_process^somatic embryogenesis","GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0016998^biological_process^cell wall macromolecule catabolic process",".","."]
["TRINITY_DN45013_c4_g7","leaves S. yangii","roots S. yangii",4.65824208260684,0,0,"TRINITY_DN45013_c4_g7_i4","Y3475_ARATH^Y3475_ARATH^Q:147-2675,H:24-890^37.57%ID^E:2e-154^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45013_c4_g7_i4.p1","60-2720[+]","Y3475_ARATH^Y3475_ARATH^Q:30-872,H:24-890^37.83%ID^E:2e-176^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^30-69^E:3.1e-06`PF13855.3^LRR_8^Leucine rich repeat^243-303^E:1.7e-06`PF13855.3^LRR_8^Leucine rich repeat^267-327^E:2.6e-06`PF00560.30^LRR_1^Leucine Rich Repeat^347-369^E:0.98`PF13855.3^LRR_8^Leucine rich repeat^443-502^E:1.4e-06`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^479-488^E:11000`PF13855.3^LRR_8^Leucine rich repeat^517-574^E:1.9e-07`PF00069.22^Pkinase^Protein kinase domain^705-872^E:2.6e-33`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^708-872^E:3.1e-27`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^770-788^E:3300","sigP:1^24^0.868^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN36026_c0_g1","leaves S. yangii","roots S. yangii",4.64864590540311,0,0,"TRINITY_DN36026_c0_g1_i1","RRP2_SPIOL^RRP2_SPIOL^Q:288-827,H:82-260^72.22%ID^E:7e-88^RecName: Full=30S ribosomal protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN36026_c0_g1_i1.p1","90-830[+]","RRP2_SPIOL^RRP2_SPIOL^Q:67-246,H:82-260^72.22%ID^E:1e-90^RecName: Full=30S ribosomal protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^71-141^E:1.1e-19`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^172-242^E:6.1e-19`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^181-243^E:0.14",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0000166^molecular_function^nucleotide binding`GO:0019843^molecular_function^rRNA binding","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN35414_c0_g1","leaves S. yangii","roots S. yangii",4.64632885555554,0,0,"TRINITY_DN35414_c0_g1_i3","TRXX_ARATH^TRXX_ARATH^Q:267-614,H:65-177^67.24%ID^E:2e-49^RecName: Full=Thioredoxin X, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35414_c0_g1_i3.p1","102-632[+]","TRXX_ARATH^TRXX_ARATH^Q:13-175,H:18-181^55.95%ID^E:4e-58^RecName: Full=Thioredoxin X, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^65-168^E:3.8e-28`PF00578.18^AhpC-TSA^AhpC/TSA family^72-143^E:0.00013`PF13098.3^Thioredoxin_2^Thioredoxin-like domain^83-165^E:1.9e-06",".",".","COG0526^Thioredoxin","KEGG:ath:AT1G50320","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0008047^molecular_function^enzyme activator activity`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0055114^biological_process^oxidation-reduction process`GO:0043085^biological_process^positive regulation of catalytic activity`GO:0006457^biological_process^protein folding`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis`GO:0016209^molecular_function^antioxidant activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45911_c3_g1","leaves S. yangii","roots S. yangii",4.64222396825001,0,0,"TRINITY_DN45911_c3_g1_i9","PP397_ARATH^PP397_ARATH^Q:2985-2098,H:5-317^54.63%ID^E:2e-108^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1571-699,H:317-569^50.17%ID^E:5e-74^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:2904-2098,H:188-456^27.68%ID^E:3e-26^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:2955-2188,H:258-496^27.8%ID^E:2e-22^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:2886-2062,H:121-397^24.11%ID^E:3e-21^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1571-1026,H:210-427^26.48%ID^E:2e-16^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1571-1029,H:102-281^29.57%ID^E:5e-15^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:1520-927,H:49-256^26.92%ID^E:1e-12^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45911_c3_g1_i9.p1","2056-3102[-]","PP397_ARATH^PP397_ARATH^Q:40-335,H:5-317^54.63%ID^E:7e-117^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:67-335,H:188-456^27.68%ID^E:4e-28^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:50-305,H:258-496^27.8%ID^E:7e-24^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP397_ARATH^PP397_ARATH^Q:73-347,H:121-397^24.11%ID^E:7e-23^RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^84-194^E:1.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^89-147^E:7.3e-07`PF01535.17^PPR^PPR repeat^103-132^E:0.96`PF13812.3^PPR_3^Pentatricopeptide repeat domain^123-183^E:9.7e-12`PF12854.4^PPR_1^PPR repeat^131-163^E:8e-06`PF13041.3^PPR_2^PPR repeat family^135-182^E:1.3e-12`PF01535.17^PPR^PPR repeat^138-168^E:8.5e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^159-220^E:6e-10`PF12854.4^PPR_1^PPR repeat^167-198^E:1.4e-06`PF13041.3^PPR_2^PPR repeat family^170-220^E:5.7e-11`PF01535.17^PPR^PPR repeat^173-200^E:5.5e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^202-247^E:1.1e-07`PF12854.4^PPR_1^PPR repeat^205-235^E:1.9e-07`PF13041.3^PPR_2^PPR repeat family^206-253^E:1.1e-14`PF01535.17^PPR^PPR repeat^210-239^E:0.00026`PF13812.3^PPR_3^Pentatricopeptide repeat domain^230-288^E:2.9e-11`PF12854.4^PPR_1^PPR repeat^238-269^E:1e-06`PF13041.3^PPR_2^PPR repeat family^241-290^E:2.5e-16`PF01535.17^PPR^PPR repeat^244-274^E:1.8e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^268-322^E:1.1e-07`PF12854.4^PPR_1^PPR repeat^273-305^E:3.6e-10`PF13041.3^PPR_2^PPR repeat family^280-323^E:6.5e-10`PF01535.17^PPR^PPR repeat^280-309^E:1.5e-06",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein",".",".",".",".","."]
["TRINITY_DN45949_c1_g1","leaves S. yangii","roots S. yangii",4.63892019741732,0,0,"TRINITY_DN45949_c1_g1_i4","PAP6_ARATH^PAP6_ARATH^Q:938-375,H:97-284^80.32%ID^E:3e-102^RecName: Full=Probable plastid-lipid-associated protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45949_c1_g1_i4.p1","372-1205[-]","PAP6_ARATH^PAP6_ARATH^Q:90-277,H:97-284^80.32%ID^E:6e-106^RecName: Full=Probable plastid-lipid-associated protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04755.9^PAP_fibrillin^PAP_fibrillin^80-274^E:2.4e-49",".",".","ENOG4111H8W^harpin binding protein 1","KEGG:ath:AT3G23400","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016020^cellular_component^membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0009658^biological_process^chloroplast organization`GO:0042742^biological_process^defense response to bacterium`GO:0010193^biological_process^response to ozone",".",".","."]
["TRINITY_DN43721_c0_g4","leaves S. yangii","roots S. yangii",4.6382602663857,0,0,"TRINITY_DN43721_c0_g4_i2","RPI3_ARATH^RPI3_ARATH^Q:1093-365,H:34-276^76.54%ID^E:2e-124^RecName: Full=Probable ribose-5-phosphate isomerase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43721_c0_g4_i2.p1","362-1183[-]","RPI3_ARATH^RPI3_ARATH^Q:31-273,H:34-276^76.54%ID^E:5e-135^RecName: Full=Probable ribose-5-phosphate isomerase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06026.11^Rib_5-P_isom_A^Ribose 5-phosphate isomerase A (phosphoriboisomerase A)^92-266^E:6.6e-60",".",".","COG0120^phosphoriboisomerase A","KEGG:ath:AT3G04790`KO:K01807","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009579^cellular_component^thylakoid`GO:0004751^molecular_function^ribose-5-phosphate isomerase activity`GO:0042742^biological_process^defense response to bacterium`GO:0009052^biological_process^pentose-phosphate shunt, non-oxidative branch`GO:0019253^biological_process^reductive pentose-phosphate cycle`GO:0009735^biological_process^response to cytokinin","GO:0004751^molecular_function^ribose-5-phosphate isomerase activity`GO:0009052^biological_process^pentose-phosphate shunt, non-oxidative branch",".","."]
["TRINITY_DN44462_c5_g1","leaves S. yangii","roots S. yangii",4.6345937485399,0,0,"TRINITY_DN44462_c5_g1_i3","ROC3_NICSY^ROC3_NICSY^Q:1117-266,H:2-276^56.1%ID^E:6e-85^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44462_c5_g1_i3.p1","263-1126[-]","ROC3_NICSY^ROC3_NICSY^Q:4-287,H:2-276^56.25%ID^E:2e-94^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^112-181^E:1.4e-17`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^204-274^E:2.6e-23`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^243-276^E:0.46",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN43745_c1_g4","leaves S. yangii","roots S. yangii",4.62267027950314,0,0,"TRINITY_DN43745_c1_g4_i2","CBSX1_ARATH^CBSX1_ARATH^Q:2772-2527,H:152-233^75.61%ID^E:3e-33^RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CBSX1_ARATH^CBSX1_ARATH^Q:6586-6371,H:65-136^68.06%ID^E:4e-21^RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43745_c1_g4_i2.p1","6350-6982[-]","CBSX1_ARATH^CBSX1_ARATH^Q:133-204,H:65-136^68.06%ID^E:2e-24^RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00571.25^CBS^CBS domain^145-189^E:3.5e-07",".",".","ENOG4111TWY^(CBS) domain","KEGG:ath:AT4G36910","GO:0009507^cellular_component^chloroplast`GO:0045454^biological_process^cell redox homeostasis",".",".","."]
["TRINITY_DN46002_c2_g1","leaves S. yangii","roots S. yangii",4.61352232428964,0,0,"TRINITY_DN46002_c2_g1_i6","GLGL1_ARATH^GLGL1_ARATH^Q:206-1771,H:1-522^76.38%ID^E:0^RecName: Full=Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46002_c2_g1_i6.p1","206-1774[+]","GLGL1_ARATH^GLGL1_ARATH^Q:1-522,H:1-522^76.38%ID^E:0^RecName: Full=Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00483.20^NTP_transferase^Nucleotidyl transferase^91-368^E:2.7e-74",".",".","COG0448^Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (By similarity)","KEGG:ath:AT5G19220`KO:K00975","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0008878^molecular_function^glucose-1-phosphate adenylyltransferase activity`GO:0005978^biological_process^glycogen biosynthetic process`GO:0019252^biological_process^starch biosynthetic process","GO:0016779^molecular_function^nucleotidyltransferase activity`GO:0009058^biological_process^biosynthetic process",".","."]
["TRINITY_DN45443_c2_g1","leaves S. yangii","roots S. yangii",4.61048273057477,0,0,"TRINITY_DN45443_c2_g1_i1","AB11G_ARATH^AB11G_ARATH^Q:2092-257,H:49-671^50.64%ID^E:0^RecName: Full=ABC transporter G family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45443_c2_g1_i1.p1","245-2191[-]","AB11G_ARATH^AB11G_ARATH^Q:34-645,H:49-671^50.64%ID^E:0^RecName: Full=ABC transporter G family member 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^58-208^E:3.8e-27`PF01061.21^ABC2_membrane^ABC-2 type transporter^357-569^E:9.9e-35",".",".","COG1131^(ABC) transporter","KEGG:ath:AT1G17840","GO:0009897^cellular_component^external side of plasma membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0015245^molecular_function^fatty acid transporter activity`GO:0042803^molecular_function^protein homodimerization activity`GO:0010588^biological_process^cotyledon vascular tissue pattern formation`GO:0080051^biological_process^cutin transport`GO:0015908^biological_process^fatty acid transport`GO:0009737^biological_process^response to abscisic acid`GO:0009651^biological_process^response to salt stress`GO:0009611^biological_process^response to wounding`GO:0010222^biological_process^stem vascular tissue pattern formation`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44345_c0_g1","leaves S. yangii","roots S. yangii",4.59977545369592,0,0,"TRINITY_DN44345_c0_g1_i1",".",".","TRINITY_DN44345_c0_g1_i1.p1","1-348[+]","THF1_SOLTU^THF1_SOLTU^Q:54-109,H:1-57^52.63%ID^E:2e-07^RecName: Full=Protein THYLAKOID FORMATION1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".","ENOG4111FQD^May be involved in photosynthetic membrane biogenesis (By similarity)","KEGG:sot:102577610","GO:0009707^cellular_component^chloroplast outer membrane`GO:0009570^cellular_component^chloroplast stroma`GO:0016021^cellular_component^integral component of membrane`GO:0010207^biological_process^photosystem II assembly",".",".","."]
["TRINITY_DN43721_c0_g5","leaves S. yangii","roots S. yangii",4.59782606148082,0,0,"TRINITY_DN43721_c0_g5_i2","RPI2_ARATH^RPI2_ARATH^Q:1243-491,H:1-252^65.48%ID^E:6e-109^RecName: Full=Probable ribose-5-phosphate isomerase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43721_c0_g5_i2.p1","392-1243[-]","RPI2_ARATH^RPI2_ARATH^Q:1-263,H:1-264^65.06%ID^E:2e-120^RecName: Full=Probable ribose-5-phosphate isomerase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06026.11^Rib_5-P_isom_A^Ribose 5-phosphate isomerase A (phosphoriboisomerase A)^82-256^E:1.7e-59",".",".","COG0120^phosphoriboisomerase A","KEGG:ath:AT2G01290`KO:K01807","GO:0005737^cellular_component^cytoplasm`GO:0004751^molecular_function^ribose-5-phosphate isomerase activity`GO:0008219^biological_process^cell death`GO:0009052^biological_process^pentose-phosphate shunt, non-oxidative branch`GO:0010228^biological_process^vegetative to reproductive phase transition of meristem","GO:0004751^molecular_function^ribose-5-phosphate isomerase activity`GO:0009052^biological_process^pentose-phosphate shunt, non-oxidative branch",".","."]
["TRINITY_DN45174_c3_g2","leaves S. yangii","roots S. yangii",4.59755856155206,0,0,"TRINITY_DN45174_c3_g2_i1","RR17_ARATH^RR17_ARATH^Q:191-598,H:10-146^61.59%ID^E:5e-34^RecName: Full=30S ribosomal protein S17, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45174_c3_g2_i1.p1","173-613[+]","RR17_ARATH^RR17_ARATH^Q:3-142,H:6-146^63.01%ID^E:5e-54^RecName: Full=30S ribosomal protein S17, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00366.17^Ribosomal_S17^Ribosomal protein S17^50-113^E:8.1e-24",".",".","COG0186^One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal","KEGG:ath:AT1G79850`KO:K02961","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0000312^cellular_component^plastid small ribosomal subunit`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0032544^biological_process^plastid translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN47330_c0_g1","leaves S. yangii","roots S. yangii",4.58770691015259,0,0,"TRINITY_DN47330_c0_g1_i8","IF2C_PHAVU^IF2C_PHAVU^Q:439-1836,H:37-503^55.89%ID^E:7e-108^RecName: Full=Translation initiation factor IF-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus",".","TRINITY_DN47330_c0_g1_i8.p1","358-1836[+]","IF2C_PHAVU^IF2C_PHAVU^Q:1-493,H:12-503^56.26%ID^E:1e-134^RecName: Full=Translation initiation factor IF-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus",".",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003743^molecular_function^translation initiation factor activity",".",".","."]
["TRINITY_DN45683_c2_g4","leaves S. yangii","roots S. yangii",4.5858499114746,0,0,"TRINITY_DN45683_c2_g4_i7","C7A29_PANGI^C7A29_PANGI^Q:5-1102,H:147-510^63.49%ID^E:1e-162^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN45683_c2_g4_i7.p1","2-1126[+]","C7A29_PANGI^C7A29_PANGI^Q:2-374,H:147-517^63.9%ID^E:4e-169^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^2-350^E:4.9e-73",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43820_c2_g1","leaves S. yangii","roots S. yangii",4.5858425955812,0,0,"TRINITY_DN43820_c2_g1_i1","ALL13_OLEEU^ALL13_OLEEU^Q:986-294,H:1-226^74.89%ID^E:5e-107^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea",".","TRINITY_DN43820_c2_g1_i1.p1","291-986[-]","ALL13_OLEEU^ALL13_OLEEU^Q:1-231,H:1-226^75.76%ID^E:2e-123^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea","PF00314.14^Thaumatin^Thaumatin family^32-231^E:1.6e-63","sigP:1^24^0.869^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN47346_c3_g1","leaves S. yangii","roots S. yangii",4.58281281007788,0,0,"TRINITY_DN47346_c3_g1_i6",".",".","TRINITY_DN47346_c3_g1_i6.p1","1036-1662[-]","ABA2_SOLLC^ABA2_SOLLC^Q:62-179,H:526-645^30.08%ID^E:2e-07^RecName: Full=Zeaxanthin epoxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF16697.2^Yop-YscD_cpl^Inner membrane component of T3SS, cytoplasmic domain^98-157^E:3.8e-09`PF00498.23^FHA^FHA domain^106-173^E:2.8e-15",".",".","COG0654^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen",".","GO:0009507^cellular_component^chloroplast`GO:0016020^cellular_component^membrane`GO:0052663^molecular_function^antheraxanthin epoxidase activity`GO:0071949^molecular_function^FAD binding`GO:0009540^molecular_function^zeaxanthin epoxidase [overall] activity`GO:0052662^molecular_function^zeaxanthin epoxidase activity`GO:0009688^biological_process^abscisic acid biosynthetic process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44865_c0_g2","leaves S. yangii","roots S. yangii",4.57938399270683,0,0,"TRINITY_DN44865_c0_g2_i1","PP222_ARATH^PP222_ARATH^Q:264-2246,H:84-778^69.11%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44865_c0_g2_i1.p1","3-2255[+]","PP222_ARATH^PP222_ARATH^Q:34-748,H:23-778^66.18%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^238-286^E:3.9e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^238-285^E:1.8e-08`PF01535.17^PPR^PPR repeat^242-271^E:0.00067`PF01535.17^PPR^PPR repeat^396-420^E:0.0071`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^409-511^E:3.3e-08`PF12854.4^PPR_1^PPR repeat^429-458^E:4.4e-06`PF13041.3^PPR_2^PPR repeat family^430-479^E:5.7e-13`PF13812.3^PPR_3^Pentatricopeptide repeat domain^430-477^E:4.5e-06`PF01535.17^PPR^PPR repeat^433-463^E:6.8e-05`PF12854.4^PPR_1^PPR repeat^462-494^E:5.1e-09`PF13041.3^PPR_2^PPR repeat family^466-513^E:1.1e-14`PF01535.17^PPR^PPR repeat^468-495^E:6.2e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^489-548^E:1.9e-11`PF13041.3^PPR_2^PPR repeat family^501-549^E:1.4e-12`PF01535.17^PPR^PPR repeat^504-534^E:4.8e-05`PF12854.4^PPR_1^PPR repeat^532-564^E:1.1e-05`PF01535.17^PPR^PPR repeat^539-566^E:8.3e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^560-615^E:3.2e-07`PF12854.4^PPR_1^PPR repeat^570-601^E:1.7e-06`PF13041.3^PPR_2^PPR repeat family^573-618^E:4.3e-12`PF01535.17^PPR^PPR repeat^575-605^E:8.3e-09",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G09650","GO:0009570^cellular_component^chloroplast stroma`GO:0003729^molecular_function^mRNA binding`GO:0000166^molecular_function^nucleotide binding`GO:0006397^biological_process^mRNA processing",".",".","."]
["TRINITY_DN43725_c2_g2","leaves S. yangii","roots S. yangii",4.57640330240438,0,0,"TRINITY_DN43725_c2_g2_i3","RK10_TOBAC^RK10_TOBAC^Q:1203-520,H:1-220^76.32%ID^E:8e-111^RecName: Full=50S ribosomal protein L10, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN43725_c2_g2_i3.p1","496-1203[-]","RK10_TOBAC^RK10_TOBAC^Q:1-235,H:1-227^78.3%ID^E:1e-127^RecName: Full=50S ribosomal protein L10, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00466.17^Ribosomal_L10^Ribosomal protein L10^59-154^E:1.9e-22",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0042254^biological_process^ribosome biogenesis","GO:0042254^biological_process^ribosome biogenesis`GO:0005622^cellular_component^intracellular",".","."]
["TRINITY_DN46211_c1_g2","leaves S. yangii","roots S. yangii",4.55406896260767,0,0,"TRINITY_DN46211_c1_g2_i2","INVE_ARATH^INVE_ARATH^Q:2291-453,H:1-598^70.08%ID^E:0^RecName: Full=Alkaline/neutral invertase E, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46211_c1_g2_i2.p1","390-2291[-]","INVE_ARATH^INVE_ARATH^Q:1-633,H:1-617^69.45%ID^E:0^RecName: Full=Alkaline/neutral invertase E, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12899.4^Glyco_hydro_100^Alkaline and neutral invertase^149-591^E:1.5e-216",".",".","ENOG410XPYN^glycopeptide alpha-N-acetylgalactosaminidase activity","KEGG:ath:AT5G22510","GO:0009507^cellular_component^chloroplast`GO:0033926^molecular_function^glycopeptide alpha-N-acetylgalactosaminidase activity`GO:0004575^molecular_function^sucrose alpha-glucosidase activity`GO:0048825^biological_process^cotyledon development`GO:0005982^biological_process^starch metabolic process`GO:0005987^biological_process^sucrose catabolic process","GO:0033926^molecular_function^glycopeptide alpha-N-acetylgalactosaminidase activity",".","."]
["TRINITY_DN46159_c1_g4","leaves S. yangii","roots S. yangii",4.54216932551159,0,0,"TRINITY_DN46159_c1_g4_i5","POR_PEA^POR_PEA^Q:1399-878,H:226-399^88.51%ID^E:1e-103^RecName: Full=Protochlorophyllide reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`POR_PEA^POR_PEA^Q:2503-1793,H:1-240^65.56%ID^E:9e-67^RecName: Full=Protochlorophyllide reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN46159_c1_g4_i5.p1","1787-2503[-]","POR_DAUCA^POR_DAUCA^Q:1-237,H:1-239^69.46%ID^E:1e-104^RecName: Full=Protochlorophyllide reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF08659.7^KR^KR domain^84-205^E:5.9e-09`PF00106.22^adh_short^short chain dehydrogenase^85-226^E:1.7e-19`PF13561.3^adh_short_C2^Enoyl-(Acyl carrier protein) reductase^90-228^E:1.8e-11",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0016630^molecular_function^protochlorophyllide reductase activity`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN43985_c2_g3","leaves S. yangii","roots S. yangii",4.54214301351658,0,0,"TRINITY_DN43985_c2_g3_i1","NES2_FRAAN^NES2_FRAAN^Q:270-1547,H:74-495^46.17%ID^E:2e-121^RecName: Full=(3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".","TRINITY_DN43985_c2_g3_i1.p1","216-1511[+]","NES2_FRAAN^NES2_FRAAN^Q:19-429,H:74-482^46.88%ID^E:2e-122^RecName: Full=(3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^13-172^E:9.3e-34`PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^204-429^E:8.2e-61",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN44758_c4_g3","leaves S. yangii","roots S. yangii",4.53076502797784,0,0,"TRINITY_DN44758_c4_g3_i1","STR4_ARATH^STR4_ARATH^Q:160-1257,H:1-370^62.03%ID^E:3e-125^RecName: Full=Rhodanese-like domain-containing protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44758_c4_g3_i1.p1","160-1476[+]","STR4_ARATH^STR4_ARATH^Q:1-428,H:1-456^55.75%ID^E:1e-141^RecName: Full=Rhodanese-like domain-containing protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111G9P^NA","KEGG:ath:AT4G01050","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005576^cellular_component^extracellular region`GO:0016021^cellular_component^integral component of membrane`GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0042742^biological_process^defense response to bacterium`GO:0009772^biological_process^photosynthetic electron transport in photosystem II",".",".","."]
["TRINITY_DN46536_c1_g1","leaves S. yangii","roots S. yangii",4.52746915824564,0,0,"TRINITY_DN46536_c1_g1_i4","EFTU1_SOYBN^EFTU1_SOYBN^Q:672-1889,H:74-479^91.38%ID^E:0^RecName: Full=Elongation factor Tu, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46536_c1_g1_i4.p1","468-1892[+]","EFTU_TOBAC^EFTU_TOBAC^Q:1-474,H:1-478^82.92%ID^E:0^RecName: Full=Elongation factor Tu, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00009.24^GTP_EFTU^Elongation factor Tu GTP binding domain^75-276^E:6.3e-56`PF03144.22^GTP_EFTU_D2^Elongation factor Tu domain 2^300-368^E:1.1e-17`PF03143.14^GTP_EFTU_D3^Elongation factor Tu C-terminal domain^373-472^E:6.7e-35",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003746^molecular_function^translation elongation factor activity","GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN38366_c0_g1","leaves S. yangii","roots S. yangii",4.52608804444383,"0.0325688203368906","0.0406782021188776","TRINITY_DN38366_c0_g1_i3","SAU22_ARATH^SAU22_ARATH^Q:10-243,H:4-77^60.49%ID^E:3e-26^RecName: Full=Auxin-responsive protein SAUR22 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SAU22_ARATH^SAU22_ARATH^Q:348-473,H:48-89^61.9%ID^E:8e-13^RecName: Full=Auxin-responsive protein SAUR22 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38366_c0_g1_i3.p1","1-351[+]","SAU22_ARATH^SAU22_ARATH^Q:4-81,H:4-77^60.49%ID^E:2e-27^RecName: Full=Auxin-responsive protein SAUR22 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02519.11^Auxin_inducible^Auxin responsive protein^23-81^E:1.6e-23",".",".","ENOG4111DHX^auxin-responsive protein","KEGG:ath:AT5G18050`KO:K14488","GO:0005886^cellular_component^plasma membrane`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0007275^biological_process^multicellular organism development`GO:0040008^biological_process^regulation of growth","GO:0009733^biological_process^response to auxin",".","."]
["TRINITY_DN47332_c3_g1","leaves S. yangii","roots S. yangii",4.51930331218708,0,0,"TRINITY_DN47332_c3_g1_i5","CSLG2_ARATH^CSLG2_ARATH^Q:62-577,H:11-177^52.91%ID^E:3e-48^RecName: Full=Cellulose synthase-like protein G2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47332_c3_g1_i5.p1","26-763[+]","CSLG2_ARATH^CSLG2_ARATH^Q:13-184,H:11-177^55.81%ID^E:2e-58^RecName: Full=Cellulose synthase-like protein G2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03552.11^Cellulose_synt^Cellulose synthase^105-188^E:1.5e-26",".",".","COG1215^Glycosyl transferase, family 2","KEGG:ath:AT4G24000","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0071555^biological_process^cell wall organization`GO:0030244^biological_process^cellulose biosynthetic process","GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0030244^biological_process^cellulose biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45531_c2_g1","leaves S. yangii","roots S. yangii",4.5188879030634,0,0,"TRINITY_DN45531_c2_g1_i16","SUT13_ARATH^SUT13_ARATH^Q:661-1539,H:26-316^75.77%ID^E:0^RecName: Full=Sulfate transporter 1.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SUT13_ARATH^SUT13_ARATH^Q:1625-2629,H:315-653^72.86%ID^E:0^RecName: Full=Sulfate transporter 1.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45531_c2_g1_i16.p2","1775-2635[+]","SUT2_STYHA^SUT2_STYHA^Q:1-283,H:372-658^74.91%ID^E:7e-154^RecName: Full=High affinity sulfate transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Stylosanthes","PF00916.17^Sulfate_transp^Sulfate permease family^1-109^E:2.5e-40`PF01740.18^STAS^STAS domain^162-276^E:8.6e-33",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0008271^molecular_function^secondary active sulfate transmembrane transporter activity","GO:0015116^molecular_function^sulfate transmembrane transporter activity`GO:0008272^biological_process^sulfate transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47358_c0_g1","leaves S. yangii","roots S. yangii",4.51482749633004,0,0,"TRINITY_DN47358_c0_g1_i10","DTX33_ARATH^DTX33_ARATH^Q:1562-306,H:92-482^52.98%ID^E:3e-110^RecName: Full=Protein DETOXIFICATION 33 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX33_ARATH^DTX33_ARATH^Q:1732-1562,H:34-90^50.88%ID^E:1e-10^RecName: Full=Protein DETOXIFICATION 33 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47358_c0_g1_i10.p2","249-905[-]","DTX33_ARATH^DTX33_ARATH^Q:3-200,H:285-482^57.58%ID^E:3e-67^RecName: Full=Protein DETOXIFICATION 33 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^1-145^E:9.1e-27",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G47530`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45837_c1_g10","leaves S. yangii","roots S. yangii",4.50156636950025,0,0,"TRINITY_DN45837_c1_g10_i3","NFYC1_ARATH^NFYC1_ARATH^Q:2532-2053,H:46-209^81.71%ID^E:2e-73^RecName: Full=Nuclear transcription factor Y subunit C-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45837_c1_g10_i3.p1","1984-2652[-]","NFYC1_ARATH^NFYC1_ARATH^Q:27-205,H:32-214^84.57%ID^E:2e-98^RecName: Full=Nuclear transcription factor Y subunit C-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^9-123^E:6e-17`PF00808.20^CBFD_NFYB_HMF^Histone-like transcription factor (CBF/NF-Y) and archaeal histone^60-123^E:8.3e-21",".",".","COG5208^Nuclear transcription factor Y","KEGG:ath:AT3G48590","GO:0016602^cellular_component^CCAAT-binding factor complex`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN46951_c1_g3","leaves S. yangii","roots S. yangii",4.5015506449749,0,0,"TRINITY_DN46951_c1_g3_i2","C7A29_PANGI^C7A29_PANGI^Q:230-3,H:93-167^60.53%ID^E:5e-20^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax`C7A29_PANGI^C7A29_PANGI^Q:956-708,H:2-81^48.19%ID^E:3e-17^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN46951_c1_g3_i2.p1","531-947[-]","C72C1_ARATH^C72C1_ARATH^Q:12-92,H:15-95^48.15%ID^E:2e-19^RecName: Full=Cytochrome P450 72C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".",".","KEGG:ath:AT1G17060`KO:K15638","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0040008^biological_process^regulation of growth",".",".","."]
["TRINITY_DN46811_c1_g3","leaves S. yangii","roots S. yangii",4.4951239246695,0,0,"TRINITY_DN46811_c1_g3_i3","CAS_ARATH^CAS_ARATH^Q:1404-412,H:53-384^68.98%ID^E:3e-156^RecName: Full=Calcium sensing receptor, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46811_c1_g3_i3.p1","397-1665[-]","CAS_ARATH^CAS_ARATH^Q:68-418,H:32-384^67.14%ID^E:4e-170^RecName: Full=Calcium sensing receptor, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00581.17^Rhodanese^Rhodanese-like domain^257-373^E:1.2e-05",".",".","ENOG4111GSH^Calcium sensing receptor","KEGG:ath:AT5G23060","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005739^cellular_component^mitochondrion`GO:0009579^cellular_component^thylakoid`GO:0071277^biological_process^cellular response to calcium ion`GO:0009704^biological_process^de-etiolation`GO:0090333^biological_process^regulation of stomatal closure",".",".","."]
["TRINITY_DN31116_c0_g1","leaves S. yangii","roots S. yangii",4.48977619218167,0,0,"TRINITY_DN31116_c0_g1_i1","PSRP6_SPIOL^PSRP6_SPIOL^Q:155-418,H:1-93^58.06%ID^E:1e-18^RecName: Full=50S ribosomal protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN31116_c0_g1_i1.p1","155-475[+]","PSRP6_SPIOL^PSRP6_SPIOL^Q:1-88,H:1-93^58.06%ID^E:1e-28^RecName: Full=50S ribosomal protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN46424_c2_g1","leaves S. yangii","roots S. yangii",4.48753070718168,0,0,"TRINITY_DN46424_c2_g1_i2","DLO2_ARATH^DLO2_ARATH^Q:1120-185,H:18-344^36.78%ID^E:3e-46^RecName: Full=Protein DMR6-LIKE OXYGENASE 2 {ECO:0000303|PubMed:25376907};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46424_c2_g1_i2.p1","170-1213[-]","DLO2_ARATH^DLO2_ARATH^Q:32-343,H:18-344^37.39%ID^E:3e-60^RecName: Full=Protein DMR6-LIKE OXYGENASE 2 {ECO:0000303|PubMed:25376907};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^51-149^E:1.1e-23`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^205-296^E:3e-22",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT4G10490","GO:0046872^molecular_function^metal ion binding`GO:0016491^molecular_function^oxidoreductase activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46209_c0_g1","leaves S. yangii","roots S. yangii",4.4840701579015,0,0,"TRINITY_DN46209_c0_g1_i4","ROC5_NICSY^ROC5_NICSY^Q:1406-897,H:115-290^39.77%ID^E:3e-30^RecName: Full=33 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC5_NICSY^ROC5_NICSY^Q:1115-891,H:115-189^33.33%ID^E:4e-07^RecName: Full=33 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46209_c0_g1_i4.p1","789-1688[-]","ROC5_NICSY^ROC5_NICSY^Q:95-283,H:115-314^38.5%ID^E:4e-34^RecName: Full=33 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC5_NICSY^ROC5_NICSY^Q:78-186,H:195-309^32.76%ID^E:3e-08^RecName: Full=33 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^96-164^E:1.1e-16`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^106-171^E:0.00072`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^193-263^E:4.6e-18`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^233-270^E:0.11",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN73272_c0_g1","leaves S. yangii","roots S. yangii",4.47301023869227,0,0,"TRINITY_DN73272_c0_g1_i1","FTRV_MAIZE^FTRV_MAIZE^Q:542-784,H:18-96^62.2%ID^E:5e-25^RecName: Full=Ferredoxin-thioredoxin reductase, variable chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN73272_c0_g1_i1.p1","287-787[+]","FTRV_MAIZE^FTRV_MAIZE^Q:86-166,H:18-96^62.2%ID^E:5e-27^RecName: Full=Ferredoxin-thioredoxin reductase, variable chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF02941.12^FeThRed_A^Ferredoxin thioredoxin reductase variable alpha chain^86-161^E:4.7e-24",".",".","COG0320^Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0016992^molecular_function^lipoate synthase activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0015979^biological_process^photosynthesis","GO:0015979^biological_process^photosynthesis",".","."]
["TRINITY_DN44479_c2_g1","leaves S. yangii","roots S. yangii",4.46318556247077,0,0,"TRINITY_DN44479_c2_g1_i4","HPT1_ARATH^HPT1_ARATH^Q:1147-158,H:64-392^72.42%ID^E:3e-169^RecName: Full=Homogentisate phytyltransferase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44479_c2_g1_i4.p1","152-1348[-]","HPT1_ARATH^HPT1_ARATH^Q:68-398,H:64-393^72.21%ID^E:9e-172^RecName: Full=Homogentisate phytyltransferase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01040.15^UbiA^UbiA prenyltransferase family^127-386^E:2.2e-42",".",".","COG0382^Synthesis of 3-octaprenyl-4-hydroxybenzoate (By similarity)","KEGG:ath:AT2G18950`KO:K09833","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010176^molecular_function^homogentisate phytyltransferase activity`GO:0071555^biological_process^cell wall organization`GO:0009915^biological_process^phloem sucrose loading`GO:0031347^biological_process^regulation of defense response`GO:0009266^biological_process^response to temperature stimulus`GO:0006636^biological_process^unsaturated fatty acid biosynthetic process`GO:0010189^biological_process^vitamin E biosynthetic process","GO:0004659^molecular_function^prenyltransferase activity`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46258_c3_g2","leaves S. yangii","roots S. yangii",4.45194828077844,0,0,"TRINITY_DN46258_c3_g2_i7","U73C3_ARATH^U73C3_ARATH^Q:1362-7,H:13-465^48.91%ID^E:6e-154^RecName: Full=UDP-glycosyltransferase 73C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46258_c3_g2_i7.p1","1-1383[-]","U73C3_ARATH^U73C3_ARATH^Q:8-459,H:13-465^48.91%ID^E:2e-156^RecName: Full=UDP-glycosyltransferase 73C3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^277-408^E:5.1e-21",".",".","COG1819^Transferase","KEGG:ath:AT2G36780`KO:K13496","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN40414_c0_g1","leaves S. yangii","roots S. yangii",4.44719874781266,0,0,"TRINITY_DN40414_c0_g1_i2","NTRC_ORYSJ^NTRC_ORYSJ^Q:380-994,H:68-273^83.5%ID^E:8e-110^RecName: Full=Thioredoxin reductase NTRC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`NTRC_ORYSJ^NTRC_ORYSJ^Q:976-1257,H:259-352^80.85%ID^E:9e-43^RecName: Full=Thioredoxin reductase NTRC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN40414_c0_g1_i2.p1","56-1027[+]","NTRC_ORYSJ^NTRC_ORYSJ^Q:93-313,H:52-273^79.28%ID^E:9e-126^RecName: Full=Thioredoxin reductase NTRC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^112-314^E:1.4e-30`PF00890.21^FAD_binding_2^FAD binding domain^113-143^E:0.00019`PF13738.3^Pyr_redox_3^Pyridine nucleotide-disulphide oxidoreductase^189-311^E:3.7e-10`PF00070.24^Pyr_redox^Pyridine nucleotide-disulphide oxidoreductase^259-314^E:2.6e-09",".",".","COG0492^thioredoxin reductase`COG0526^Thioredoxin","KEGG:osa:4344159`KO:K00384","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0008047^molecular_function^enzyme activator activity`GO:0042802^molecular_function^identical protein binding`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0004791^molecular_function^thioredoxin-disulfide reductase activity`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0045454^biological_process^cell redox homeostasis`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway`GO:0010380^biological_process^regulation of chlorophyll biosynthetic process`GO:0010581^biological_process^regulation of starch biosynthetic process`GO:0019430^biological_process^removal of superoxide radicals`GO:0046686^biological_process^response to cadmium ion`GO:0010027^biological_process^thylakoid membrane organization","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45009_c2_g2","leaves S. yangii","roots S. yangii",4.43541423783525,0,0,"TRINITY_DN45009_c2_g2_i1","SPA_SOLLC^SPA_SOLLC^Q:351-821,H:1-159^74.21%ID^E:6e-57^RecName: Full=Protein SPA, chloroplastic {ECO:0000303|PubMed:24372694};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45009_c2_g2_i1.p1","351-824[+]","SPA_SOLLC^SPA_SOLLC^Q:1-157,H:1-159^75.47%ID^E:1e-83^RecName: Full=Protein SPA, chloroplastic {ECO:0000303|PubMed:24372694};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".",".",".","ENOG4111Q7U^NA","KEGG:sly:101259741","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN43828_c0_g2","leaves S. yangii","roots S. yangii",4.42320151921094,0,0,"TRINITY_DN43828_c0_g2_i2","PPL1_ARATH^PPL1_ARATH^Q:994-380,H:24-228^64.56%ID^E:8e-87^RecName: Full=PsbP-like protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43828_c0_g2_i2.p1","368-1081[-]","PPL1_ARATH^PPL1_ARATH^Q:30-234,H:24-228^64.56%ID^E:2e-92^RecName: Full=PsbP-like protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01789.13^PsbP^PsbP^78-234^E:2.6e-54",".",".","ENOG4111N4V^Photosystem II oxygen evolving complex protein PsbP","KEGG:ath:AT3G55330`KO:K02717","GO:0009507^cellular_component^chloroplast`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0019898^cellular_component^extrinsic component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis","GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis`GO:0009523^cellular_component^photosystem II`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0019898^cellular_component^extrinsic component of membrane",".","."]
["TRINITY_DN46729_c4_g3","leaves S. yangii","roots S. yangii",4.42312084947215,0,0,"TRINITY_DN46729_c4_g3_i1","RK3_TOBAC^RK3_TOBAC^Q:369-1028,H:40-259^83.64%ID^E:2e-124^RecName: Full=50S ribosomal protein L3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46729_c4_g3_i1.p1","198-1031[+]","RK3_TOBAC^RK3_TOBAC^Q:28-277,H:10-259^78.26%ID^E:6e-133^RecName: Full=50S ribosomal protein L3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00297.19^Ribosomal_L3^Ribosomal protein L3^156-243^E:1.3e-17",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45122_c1_g5","leaves S. yangii","roots S. yangii",4.41679743327303,0,0,"TRINITY_DN45122_c1_g5_i3","SSG1_ANTMA^SSG1_ANTMA^Q:2115-241,H:1-608^75.39%ID^E:0^RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum",".","TRINITY_DN45122_c1_g5_i3.p1","394-2115[-]","SSG1_ANTMA^SSG1_ANTMA^Q:1-563,H:1-570^78.15%ID^E:0^RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum","PF08323.8^Glyco_transf_5^Starch synthase catalytic domain^76-334^E:2.9e-74`PF00534.17^Glycos_transf_1^Glycosyl transferases group 1^393-520^E:1.9e-15`PF13692.3^Glyco_trans_1_4^Glycosyl transferases group 1^393-513^E:2.5e-10",".",".",".",".","GO:0009501^cellular_component^amyloplast`GO:0009507^cellular_component^chloroplast`GO:0033201^molecular_function^alpha-1,4-glucan synthase activity`GO:0004373^molecular_function^glycogen (starch) synthase activity`GO:0009011^molecular_function^starch synthase activity`GO:0019252^biological_process^starch biosynthetic process",".",".","."]
["TRINITY_DN43735_c1_g1","leaves S. yangii","roots S. yangii",4.40961361929381,0,0,"TRINITY_DN43735_c1_g1_i4","C74B2_ARATH^C74B2_ARATH^Q:4465-3083,H:36-492^56.16%ID^E:1e-160^RecName: Full=Linolenate hydroperoxide lyase, chloroplastic {ECO:0000305|PubMed:9701595};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43735_c1_g1_i4.p1","3080-4522[-]","C74B2_ARATH^C74B2_ARATH^Q:20-480,H:36-492^56.16%ID^E:0^RecName: Full=Linolenate hydroperoxide lyase, chloroplastic {ECO:0000305|PubMed:9701595};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^311-463^E:2.5e-19",".",".","ENOG410YEK3^hydroperoxide lyase",".","GO:0009507^cellular_component^chloroplast`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016829^molecular_function^lyase activity`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0010597^biological_process^green leaf volatile biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43593_c1_g11","leaves S. yangii","roots S. yangii",4.40829974512362,0,0,"TRINITY_DN43593_c1_g11_i1","DEGP1_ARATH^DEGP1_ARATH^Q:1259-177,H:77-439^88.71%ID^E:0^RecName: Full=Protease Do-like 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43593_c1_g11_i1.p1","174-1466[-]","DEGP1_ARATH^DEGP1_ARATH^Q:70-430,H:77-439^88.71%ID^E:0^RecName: Full=Protease Do-like 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13365.3^Trypsin_2^Trypsin-like peptidase domain^148-287^E:1.5e-36`PF00089.23^Trypsin^Trypsin^152-310^E:1.2e-16`PF13180.3^PDZ_2^PDZ domain^326-422^E:3.5e-14",".",".","COG0265^Serine protease","KEGG:ath:AT3G27925","GO:0009507^cellular_component^chloroplast`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005634^cellular_component^nucleus`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0008236^molecular_function^serine-type peptidase activity`GO:0010206^biological_process^photosystem II repair`GO:0030163^biological_process^protein catabolic process`GO:0009735^biological_process^response to cytokinin","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44638_c3_g1","leaves S. yangii","roots S. yangii",4.40076319507085,0,0,"TRINITY_DN44638_c3_g1_i2","SPPA1_ARATH^SPPA1_ARATH^Q:1134-325,H:403-672^70.37%ID^E:4e-107^RecName: Full=Serine protease SPPA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44638_c3_g1_i2.p1","310-1152[-]","SPPA1_ARATH^SPPA1_ARATH^Q:7-280,H:403-676^70.8%ID^E:9e-130^RecName: Full=Serine protease SPPA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01343.15^Peptidase_S49^Peptidase family S49^48-199^E:4.1e-41",".",".","COG0616^Signal peptide peptidase, SppA","KEGG:ath:AT1G73990`KO:K04773","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis`GO:0006465^biological_process^signal peptide processing","GO:0008233^molecular_function^peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN43848_c0_g1","leaves S. yangii","roots S. yangii",4.39469970455873,0,0,"TRINITY_DN43848_c0_g1_i13","Y1669_ARATH^Y1669_ARATH^Q:2276-1356,H:18-328^28.31%ID^E:2e-21^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43848_c0_g1_i13.p1","1179-2342[-]","Y1669_ARATH^Y1669_ARATH^Q:17-329,H:12-328^28.11%ID^E:4e-23^RecName: Full=Uncharacterized oxidoreductase At1g06690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00248.18^Aldo_ket_red^Aldo/keto reductase family^64-364^E:2.6e-62",".",".","COG0667^Aldo keto reductase","KEGG:ath:AT1G06690","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0010287^cellular_component^plastoglobule`GO:0016491^molecular_function^oxidoreductase activity",".",".","."]
["TRINITY_DN41905_c0_g1","leaves S. yangii","roots S. yangii",4.38608034591354,0,0,"TRINITY_DN41905_c0_g1_i3","PREP1_ARATH^PREP1_ARATH^Q:3407-1302,H:308-1009^77.64%ID^E:0^RecName: Full=Presequence protease 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PREP1_ARATH^PREP1_ARATH^Q:4564-3851,H:74-308^85.29%ID^E:1e-125^RecName: Full=Presequence protease 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41905_c0_g1_i3.p1","1296-3434[-]","PREP1_ARATH^PREP1_ARATH^Q:10-711,H:308-1009^77.64%ID^E:0^RecName: Full=Presequence protease 1, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05193.18^Peptidase_M16_C^Peptidase M16 inactive domain^10-190^E:6.1e-23`PF08367.8^M16C_assoc^Peptidase M16C associated^268-517^E:8.8e-79",".",".","COG1026^peptidase",".","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005759^cellular_component^mitochondrial matrix`GO:0005739^cellular_component^mitochondrion`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008270^molecular_function^zinc ion binding`GO:0016485^biological_process^protein processing`GO:0046686^biological_process^response to cadmium ion","GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN41916_c0_g1","leaves S. yangii","roots S. yangii",4.38571351078259,0,0,"TRINITY_DN41916_c0_g1_i6","BAS1A_ARATH^BAS1A_ARATH^Q:874-296,H:71-263^92.75%ID^E:3e-129^RecName: Full=2-Cys peroxiredoxin BAS1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41916_c0_g1_i6.p1","284-1279[-]","BAS1B_ARATH^BAS1B_ARATH^Q:117-331,H:58-273^86.57%ID^E:2e-135^RecName: Full=2-Cys peroxiredoxin BAS1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00578.18^AhpC-TSA^AhpC/TSA family^140-273^E:1.7e-39`PF08534.7^Redoxin^Redoxin^140-275^E:2.1e-12`PF10417.6^1-cysPrx_C^C-terminal domain of 1-Cys peroxiredoxin^294-328^E:1.2e-10",".",".","COG0450^alkyl hydroperoxide reductase","KEGG:ath:AT5G06290`KO:K03386","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0010319^cellular_component^stromule`GO:0004601^molecular_function^peroxidase activity`GO:0051920^molecular_function^peroxiredoxin activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042742^biological_process^defense response to bacterium`GO:0009409^biological_process^response to cold","GO:0016209^molecular_function^antioxidant activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0051920^molecular_function^peroxiredoxin activity",".","."]
["TRINITY_DN44963_c7_g2","leaves S. yangii","roots S. yangii",4.36057953692491,0,0,"TRINITY_DN44963_c7_g2_i12","PHT44_ORYSJ^PHT44_ORYSJ^Q:156-1781,H:1-519^62.06%ID^E:0^RecName: Full=Probable anion transporter 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`PHT44_ORYSJ^PHT44_ORYSJ^Q:1823-2056,H:509-561^61.54%ID^E:2e-14^RecName: Full=Probable anion transporter 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`PHT44_ORYSJ^PHT44_ORYSJ^Q:2515-2610,H:560-591^71.88%ID^E:4e-06^RecName: Full=Probable anion transporter 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44963_c7_g2_i12.p1","156-1757[+]","PHT44_ORYSJ^PHT44_ORYSJ^Q:1-532,H:1-509^62.66%ID^E:0^RecName: Full=Probable anion transporter 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF07690.13^MFS_1^Major Facilitator Superfamily^211-513^E:1e-54`PF05977.10^MFS_3^Transmembrane secretion effector^213-391^E:6.6e-05`PF00083.21^Sugar_tr^Sugar (and other) transporter^239-375^E:4.9e-06",".",".","ENOG410XPWC^solute carrier family 17","KEGG:osa:4347913","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009536^cellular_component^plastid`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0098656^biological_process^anion transmembrane transport`GO:0006098^biological_process^pentose-phosphate shunt","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0022857^molecular_function^transmembrane transporter activity",".","."]
["TRINITY_DN39872_c0_g1","leaves S. yangii","roots S. yangii",4.3456530037879,0,0,"TRINITY_DN39872_c0_g1_i2","RK15_PEA^RK15_PEA^Q:231-941,H:20-254^71.13%ID^E:6e-88^RecName: Full=50S ribosomal protein L15, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN39872_c0_g1_i2.p1","477-956[+]","RK15_PEA^RK15_PEA^Q:1-148,H:100-247^81.08%ID^E:4e-80^RecName: Full=50S ribosomal protein L15, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00828.16^Ribosomal_L27A^Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A^2-120^E:2.7e-28",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0015934^cellular_component^large ribosomal subunit`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN28045_c0_g2","leaves S. yangii","roots S. yangii",4.34528915012149,0,0,"TRINITY_DN28045_c0_g2_i1","RK29_ARATH^RK29_ARATH^Q:879-412,H:1-158^64.38%ID^E:4e-52^RecName: Full=50S ribosomal protein L29, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28045_c0_g2_i1.p1","373-879[-]","RK29_ARATH^RK29_ARATH^Q:1-156,H:1-158^65%ID^E:3e-57^RecName: Full=50S ribosomal protein L29, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00831.20^Ribosomal_L29^Ribosomal L29 protein^66-122^E:2.7e-16",".",".","COG0255^50s ribosomal protein l29","KEGG:ath:AT5G65220`KO:K02904","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009295^cellular_component^nucleoid`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45662_c2_g1","leaves S. yangii","roots S. yangii",4.34135026651899,0,0,"TRINITY_DN45662_c2_g1_i6","NDHL_ARATH^NDHL_ARATH^Q:527-183,H:76-190^62.61%ID^E:2e-43^RecName: Full=NAD(P)H-quinone oxidoreductase subunit L, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45662_c2_g1_i6.p1","1220-3739[+]","ADLO1_ARATH^ADLO1_ARATH^Q:137-297,H:610-772^30.3%ID^E:1e-06^RecName: Full=Protein ARABIDILLO 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05804.9^KAP^Kinesin-associated protein (KAP)^201-306^E:9.3e-05",".",".","ENOG410ZZ0B^Armadillo beta-catenin repeat family protein","KEGG:ath:AT2G44900","GO:0005634^cellular_component^nucleus`GO:0048527^biological_process^lateral root development",".",".","."]
["TRINITY_DN39120_c0_g1","leaves S. yangii","roots S. yangii",4.3152891031628,0,0,"TRINITY_DN39120_c0_g1_i2",".",".","TRINITY_DN39120_c0_g1_i2.p1","260-955[-]","CPP1_NICBE^CPP1_NICBE^Q:54-231,H:99-252^28.73%ID^E:3e-08^RecName: Full=Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic {ECO:0000303|PubMed:24151298};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF11833.5^DUF3353^Protein of unknown function (DUF3353)^52-230^E:1.2e-52",".",".",".",".","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0055035^cellular_component^plastid thylakoid membrane`GO:0044183^molecular_function^protein binding involved in protein folding`GO:0061077^biological_process^chaperone-mediated protein folding`GO:0009658^biological_process^chloroplast organization`GO:0009704^biological_process^de-etiolation`GO:0006457^biological_process^protein folding",".",".","."]
["TRINITY_DN47475_c5_g4","leaves S. yangii","roots S. yangii",4.30332639501165,0,0,"TRINITY_DN47475_c5_g4_i1","Y4230_ARATH^Y4230_ARATH^Q:1031-687,H:708-823^54.31%ID^E:2e-32^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47475_c5_g4_i1.p1","600-1031[-]","SD17_ARATH^SD17_ARATH^Q:1-143,H:695-843^46.98%ID^E:1e-36^RecName: Full=Receptor-like serine/threonine-protein kinase SD1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^3-96^E:3.2e-07`PF11883.5^DUF3403^Domain of unknown function (DUF3403)^99-143^E:1.7e-11",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G65790","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0031625^molecular_function^ubiquitin protein ligase binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0071215^biological_process^cellular response to abscisic acid stimulus`GO:0006952^biological_process^defense response`GO:0046777^biological_process^protein autophosphorylation`GO:0006468^biological_process^protein phosphorylation`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0004674^molecular_function^protein serine/threonine kinase activity",".","."]
["TRINITY_DN38095_c0_g1","leaves S. yangii","roots S. yangii",4.30039374595585,0,0,"TRINITY_DN38095_c0_g1_i3","RK24_TOBAC^RK24_TOBAC^Q:423-857,H:42-186^82.07%ID^E:5e-81^RecName: Full=50S ribosomal protein L24, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN38095_c0_g1_i3.p1","366-860[+]","RK24_TOBAC^RK24_TOBAC^Q:20-164,H:42-186^82.07%ID^E:2e-84^RecName: Full=50S ribosomal protein L24, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00467.26^KOW^KOW motif^45-74^E:1.5e-07`PF17136.1^ribosomal_L24^Ribosomal proteins 50S L24/mitochondrial 39S L24^77-141^E:7.6e-19",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN45267_c2_g4","leaves S. yangii","roots S. yangii",4.28690730223861,0,0,"TRINITY_DN45267_c2_g4_i2","DB10_NICSY^DB10_NICSY^Q:3481-1895,H:7-524^73.12%ID^E:0^RecName: Full=ATP-dependent RNA helicase-like protein DB10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45267_c2_g4_i2.p1","1262-3484[-]","DB10_NICSY^DB10_NICSY^Q:8-631,H:13-603^69.06%ID^E:0^RecName: Full=ATP-dependent RNA helicase-like protein DB10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00270.26^DEAD^DEAD/DEAH box helicase^175-345^E:1.8e-48`PF04851.12^ResIII^Type III restriction enzyme, res subunit^190-338^E:3.6e-05`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^382-490^E:6.2e-33",".",".",".",".","GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0003723^molecular_function^RNA binding","GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN47554_c1_g1","leaves S. yangii","roots S. yangii",4.28219571932026,0,0,"TRINITY_DN47554_c1_g1_i3","GAT22_ARATH^GAT22_ARATH^Q:520-816,H:115-222^43.52%ID^E:3e-12^RecName: Full=Putative GATA transcription factor 22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GAT22_ARATH^GAT22_ARATH^Q:1326-1463,H:307-352^56.52%ID^E:2e-06^RecName: Full=Putative GATA transcription factor 22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47554_c1_g1_i3.p1","1-852[+]","GAT22_ARATH^GAT22_ARATH^Q:174-272,H:115-222^43.52%ID^E:4e-18^RecName: Full=Putative GATA transcription factor 22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00320.24^GATA^GATA zinc finger^251-270^E:7.8e-08","sigP:1^26^0.687^YES",".","COG5641^Transcription factor","KEGG:ath:AT4G26150","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003682^molecular_function^chromatin binding`GO:0000977^molecular_function^RNA polymerase II regulatory region sequence-specific DNA binding`GO:0001085^molecular_function^RNA polymerase II transcription factor binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0001228^molecular_function^transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding`GO:0008270^molecular_function^zinc ion binding`GO:0030154^biological_process^cell differentiation`GO:0007623^biological_process^circadian rhythm`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0009910^biological_process^negative regulation of flower development`GO:0010187^biological_process^negative regulation of seed germination`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0010380^biological_process^regulation of chlorophyll biosynthetic process`GO:0010468^biological_process^regulation of gene expression`GO:0009735^biological_process^response to cytokinin`GO:0009416^biological_process^response to light stimulus`GO:0006366^biological_process^transcription from RNA polymerase II promoter","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45547_c4_g2","leaves S. yangii","roots S. yangii",4.27767049906521,0,0,"TRINITY_DN45547_c4_g2_i2","MEX1_ORYSJ^MEX1_ORYSJ^Q:2383-1901,H:68-228^67.08%ID^E:2e-42^RecName: Full=Maltose excess protein 1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MEX1_ORYSJ^MEX1_ORYSJ^Q:1820-1719,H:227-260^61.76%ID^E:2e-42^RecName: Full=Maltose excess protein 1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MEX1_ORYSJ^MEX1_ORYSJ^Q:917-663,H:292-351^54.12%ID^E:6e-42^RecName: Full=Maltose excess protein 1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MEX1_ORYSJ^MEX1_ORYSJ^Q:601-443,H:347-399^56.6%ID^E:6e-42^RecName: Full=Maltose excess protein 1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MEX1_ORYSJ^MEX1_ORYSJ^Q:1128-1027,H:258-291^85.29%ID^E:6e-42^RecName: Full=Maltose excess protein 1-like, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45547_c4_g2_i2.p1","1892-2605[-]","MEX1_ARATH^MEX1_ARATH^Q:59-235,H:61-244^57.61%ID^E:1e-53^RecName: Full=Maltose excess protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZKZ6^maltose excess protein","KEGG:ath:AT5G17520","GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005363^molecular_function^maltose transmembrane transporter activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0000023^biological_process^maltose metabolic process`GO:0015768^biological_process^maltose transport`GO:0009624^biological_process^response to nematode`GO:0005983^biological_process^starch catabolic process",".",".","."]
["TRINITY_DN46780_c2_g3","leaves S. yangii","roots S. yangii",4.27529155199229,0,0,"TRINITY_DN46780_c2_g3_i1","IN21B_ORYSJ^IN21B_ORYSJ^Q:325-1023,H:10-244^65.11%ID^E:4e-105^RecName: Full=Protein IN2-1 homolog B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46780_c2_g3_i1.p1","166-1041[+]","IN21B_ORYSJ^IN21B_ORYSJ^Q:54-286,H:10-244^65.11%ID^E:2e-106^RecName: Full=Protein IN2-1 homolog B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^80-156^E:5.5e-20`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^86-151^E:4.9e-12`PF16865.2^GST_C_5^Glutathione S-transferase, C-terminal domain^171-263^E:2.5e-07`PF00043.22^GST_C^Glutathione S-transferase, C-terminal domain^187-261^E:0.00032`PF13410.3^GST_C_2^Glutathione S-transferase, C-terminal domain^193-257^E:3.6e-06",".",".","ENOG410XSIX^glutathione Stransferase","KEGG:osa:4332455`KO:K00799","GO:0005737^cellular_component^cytoplasm`GO:0004364^molecular_function^glutathione transferase activity`GO:0006749^biological_process^glutathione metabolic process`GO:0010731^biological_process^protein glutathionylation","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN39267_c0_g1","leaves S. yangii","roots S. yangii",4.26127222787761,0,0,"TRINITY_DN39267_c0_g1_i3","RK28_TOBAC^RK28_TOBAC^Q:1005-631,H:26-150^76%ID^E:2e-59^RecName: Full=50S ribosomal protein L28, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN39267_c0_g1_i3.p1","625-1077[-]","RK28_TOBAC^RK28_TOBAC^Q:25-149,H:26-150^76%ID^E:2e-63^RecName: Full=50S ribosomal protein L28, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00830.16^Ribosomal_L28^Ribosomal L28 family^75-133^E:3.1e-21",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome",".","."]
["TRINITY_DN44970_c0_g1","leaves S. yangii","roots S. yangii",4.23210697220834,0,0,"TRINITY_DN44970_c0_g1_i9","LRKS5_ARATH^LRKS5_ARATH^Q:259-2082,H:51-647^36.16%ID^E:5e-104^RecName: Full=Probable L-type lectin-domain containing receptor kinase S.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44970_c0_g1_i9.p1","91-2109[+]","LRKS5_ARATH^LRKS5_ARATH^Q:57-664,H:51-647^36.04%ID^E:1e-128^RecName: Full=Probable L-type lectin-domain containing receptor kinase S.5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00139.16^Lectin_legB^Legume lectin domain^42-279^E:2.1e-56`PF00069.22^Pkinase^Protein kinase domain^353-621^E:3.5e-48`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^355-620^E:1.5e-46",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G06740","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44106_c1_g6","leaves S. yangii","roots S. yangii",4.23091275019248,0,0,"TRINITY_DN44106_c1_g6_i1","ROC2_NICPL^ROC2_NICPL^Q:258-794,H:115-287^61.11%ID^E:9e-59^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC2_NICPL^ROC2_NICPL^Q:531-803,H:80-172^47.31%ID^E:5e-16^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC2_NICPL^ROC2_NICPL^Q:267-428,H:238-291^40.74%ID^E:2e-07^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44106_c1_g6_i1.p1","321-800[+]","ROC2_NICPL^ROC2_NICPL^Q:1-158,H:136-287^61.35%ID^E:7e-54^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`ROC2_NICPL^ROC2_NICPL^Q:71-159,H:80-170^47.25%ID^E:9e-18^RecName: Full=31 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^81-151^E:2.5e-21`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^97-154^E:0.23",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN44458_c1_g1","leaves S. yangii","roots S. yangii",4.22488296673108,0,0,"TRINITY_DN44458_c1_g1_i3","CA1P_ARATH^CA1P_ARATH^Q:1734-421,H:44-481^65.68%ID^E:0^RecName: Full=Probable 2-carboxy-D-arabinitol-1-phosphatase {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44458_c1_g1_i3.p1","397-2007[-]","CA1P_ARATH^CA1P_ARATH^Q:28-529,H:9-481^59.92%ID^E:0^RecName: Full=Probable 2-carboxy-D-arabinitol-1-phosphatase {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00300.19^His_Phos_1^Histidine phosphatase superfamily (branch 1)^98-280^E:9.7e-41`PF00300.19^His_Phos_1^Histidine phosphatase superfamily (branch 1)^316-503^E:1.6e-12",".",".","COG0406^Phosphoglycerate mutase","KEGG:ath:AT5G22620`KO:K15634","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0047538^molecular_function^2-carboxy-D-arabinitol-1-phosphatase activity",".",".","."]
["TRINITY_DN46719_c4_g1","leaves S. yangii","roots S. yangii",4.22142270059931,0,0,"TRINITY_DN46719_c4_g1_i1","WSD1_ARATH^WSD1_ARATH^Q:1808-741,H:17-380^29.44%ID^E:1e-37^RecName: Full=O-acyltransferase WSD1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46719_c4_g1_i1.p1","510-1832[-]","WSD1_ARATH^WSD1_ARATH^Q:9-364,H:17-380^29.63%ID^E:1e-42^RecName: Full=O-acyltransferase WSD1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03007.13^WES_acyltransf^Wax ester synthase-like Acyl-CoA acyltransferase domain^38-250^E:1.2e-08`PF06974.10^DUF1298^Protein of unknown function (DUF1298)^307-366^E:4.6e-12",".",".","ENOG410ZXQW^O-acyltransferase (WSD1-like) family protein","KEGG:ath:AT5G37300`KO:K15406","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0004144^molecular_function^diacylglycerol O-acyltransferase activity`GO:0047196^molecular_function^long-chain-alcohol O-fatty-acyltransferase activity`GO:0019432^biological_process^triglyceride biosynthetic process`GO:0010025^biological_process^wax biosynthetic process","GO:0004144^molecular_function^diacylglycerol O-acyltransferase activity`GO:0045017^biological_process^glycerolipid biosynthetic process",".","."]
["TRINITY_DN46667_c2_g2","leaves S. yangii","roots S. yangii",4.21565411253731,0,0,"TRINITY_DN46667_c2_g2_i1","FDL16_ARATH^FDL16_ARATH^Q:2965-2003,H:4-305^27.68%ID^E:6e-15^RecName: Full=F-box/FBD/LRR-repeat protein At2g26030;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46667_c2_g2_i1.p1","1670-3013[-]","FDL16_ARATH^FDL16_ARATH^Q:17-337,H:4-305^27.68%ID^E:7e-19^RecName: Full=F-box/FBD/LRR-repeat protein At2g26030;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^18-54^E:1.1e-05",".",".","ENOG410ZUW1^F-box LRR-repeat protein","KEGG:ath:AT2G26030",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45992_c0_g1","leaves S. yangii","roots S. yangii",4.21138262761663,0,0,"TRINITY_DN45992_c0_g1_i3","RRFC_DAUCA^RRFC_DAUCA^Q:1336-647,H:1-227^75.65%ID^E:4e-98^RecName: Full=Ribosome-recycling factor, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45992_c0_g1_i3.p1","554-1441[-]","RRFC_DAUCA^RRFC_DAUCA^Q:36-265,H:1-227^75.65%ID^E:1e-121^RecName: Full=Ribosome-recycling factor, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF01765.16^RRF^Ribosome recycling factor^102-260^E:1.4e-57",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN47586_c0_g3","leaves S. yangii","roots S. yangii",4.18328238522428,0,0,"TRINITY_DN47586_c0_g3_i2","MTBC1_VITVI^MTBC1_VITVI^Q:1-693,H:286-517^80.6%ID^E:1e-131^RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 {ECO:0000255|HAMAP-Rule:MF_03118};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN47586_c0_g3_i2.p1","1-696[+]","MTBC1_VITVI^MTBC1_VITVI^Q:1-231,H:286-517^80.6%ID^E:4e-133^RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 {ECO:0000255|HAMAP-Rule:MF_03118};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF13419.3^HAD_2^Haloacid dehalogenase-like hydrolase^94-206^E:2.8e-05",".",".","COG0235^Class II aldolase adducin`COG4229^Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) (By similarity)",".","GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0043874^molecular_function^acireductone synthase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0046570^molecular_function^methylthioribulose 1-phosphate dehydratase activity`GO:0019509^biological_process^L-methionine biosynthetic process from methylthioadenosine",".",".","."]
["TRINITY_DN44143_c1_g2","leaves S. yangii","roots S. yangii",4.1818519398202,0,0,"TRINITY_DN44143_c1_g2_i7","HHL1_ARATH^HHL1_ARATH^Q:783-1187,H:84-218^74.81%ID^E:3e-56^RecName: Full=Protein HHL1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HHL1_ARATH^HHL1_ARATH^Q:313-576,H:4-92^62.22%ID^E:9e-28^RecName: Full=Protein HHL1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44143_c1_g2_i7.p1","786-1250[+]","HHL1_ARATH^HHL1_ARATH^Q:3-150,H:87-230^72.3%ID^E:1e-70^RecName: Full=Protein HHL1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^19^0.473^YES",".","ENOG4111RV1^NA","KEGG:ath:AT1G67700","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006518^biological_process^peptide metabolic process`GO:0006508^biological_process^proteolysis",".",".","."]
["TRINITY_DN41115_c1_g1","leaves S. yangii","roots S. yangii",4.1802913331057,0,0,"TRINITY_DN41115_c1_g1_i2","AB2D_ARATH^AB2D_ARATH^Q:2273-285,H:57-690^64.23%ID^E:0^RecName: Full=ABC transporter D family member 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41115_c1_g1_i2.p1","1032-1937[-]","AB2D_ARATH^AB2D_ARATH^Q:1-300,H:160-462^70.63%ID^E:2e-143^RecName: Full=ABC transporter D family member 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06472.12^ABC_membrane_2^ABC transporter transmembrane region 2^2-178^E:2.2e-41`PF05992.9^SbmA_BacA^SbmA/BacA-like family^24-226^E:1e-14",".",".","COG4178^(ABC) transporter","KEGG:ath:AT1G54350","GO:0009507^cellular_component^chloroplast`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity",".","."]
["TRINITY_DN45698_c0_g1","leaves S. yangii","roots S. yangii",4.17398731127844,0,0,"TRINITY_DN45698_c0_g1_i12","GLYK_ARATH^GLYK_ARATH^Q:825-1484,H:237-456^80.91%ID^E:2e-165^RecName: Full=D-glycerate 3-kinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GLYK_ARATH^GLYK_ARATH^Q:266-745,H:78-237^64.63%ID^E:2e-165^RecName: Full=D-glycerate 3-kinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45698_c0_g1_i12.p2","1008-1487[+]","GLYK_ARATH^GLYK_ARATH^Q:1-159,H:298-456^83.02%ID^E:3e-93^RecName: Full=D-glycerate 3-kinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4240^D-glycerate 3-kinase",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0008887^molecular_function^glycerate kinase activity`GO:0009854^biological_process^oxidative photosynthetic carbon pathway`GO:0009853^biological_process^photorespiration",".",".","."]
["TRINITY_DN46451_c1_g5","leaves S. yangii","roots S. yangii",4.15052362949359,0,0,"TRINITY_DN46451_c1_g5_i1","RK13_ARATH^RK13_ARATH^Q:629-273,H:122-240^87.39%ID^E:2e-69^RecName: Full=50S ribosomal protein L13, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46451_c1_g5_i1.p1","267-575[-]","RK13_ARATH^RK13_ARATH^Q:1-101,H:140-240^87.13%ID^E:3e-58^RecName: Full=50S ribosomal protein L13, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00572.15^Ribosomal_L13^Ribosomal protein L13^1-88^E:4.4e-33",".",".","COG0102^This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity)","KEGG:ath:AT1G78630`KO:K02871","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0009579^cellular_component^thylakoid`GO:0003729^molecular_function^mRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009735^biological_process^response to cytokinin`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45603_c2_g7","leaves S. yangii","roots S. yangii",4.14678494979509,0,0,"TRINITY_DN45603_c2_g7_i1","C7D55_HYOMU^C7D55_HYOMU^Q:319-1665,H:44-499^48.36%ID^E:6e-155^RecName: Full=Premnaspirodiene oxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Hyoscyamus",".","TRINITY_DN45603_c2_g7_i1.p1","184-1680[+]","C7D55_HYOMU^C7D55_HYOMU^Q:27-494,H:25-499^48.95%ID^E:5e-166^RecName: Full=Premnaspirodiene oxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Hyoscyameae; Hyoscyamus","PF00067.19^p450^Cytochrome P450^35-481^E:1.3e-93",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN29265_c0_g1","leaves S. yangii","roots S. yangii",4.14600037888499,0,0,"TRINITY_DN29265_c0_g1_i3","DEF1B_SOLLC^DEF1B_SOLLC^Q:226-777,H:60-243^72.28%ID^E:2e-94^RecName: Full=Peptide deformylase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN29265_c0_g1_i3.p1","1-795[+]","DEF1B_SOLLC^DEF1B_SOLLC^Q:39-259,H:14-243^62.17%ID^E:4e-97^RecName: Full=Peptide deformylase 1B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF01327.18^Pep_deformylase^Polypeptide deformylase^104-252^E:5.3e-50",".",".","COG0242^Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity)","KEGG:sly:543648`KO:K01462","GO:0009507^cellular_component^chloroplast`GO:0005506^molecular_function^iron ion binding`GO:0042586^molecular_function^peptide deformylase activity`GO:0043686^biological_process^co-translational protein modification`GO:0031365^biological_process^N-terminal protein amino acid modification`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN41459_c0_g1","leaves S. yangii","roots S. yangii",4.1429123544417,0,0,"TRINITY_DN41459_c0_g1_i7","PPF1_PEA^PPF1_PEA^Q:860-315,H:246-426^67.21%ID^E:2e-61^RecName: Full=Inner membrane protein PPF-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN41459_c0_g1_i7.p1","270-776[-]","PPF1_PEA^PPF1_PEA^Q:1-154,H:274-426^67.95%ID^E:9e-58^RecName: Full=Inner membrane protein PPF-1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF02096.17^60KD_IMP^60Kd inner membrane protein^16-59^E:6e-11",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0051205^biological_process^protein insertion into membrane","GO:0051205^biological_process^protein insertion into membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46819_c1_g1","leaves S. yangii","roots S. yangii",4.13111380726201,0,0,"TRINITY_DN46819_c1_g1_i3","ANTR1_ARATH^ANTR1_ARATH^Q:789-151,H:1-208^58.04%ID^E:6e-61^RecName: Full=Sodium-dependent phosphate transport protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46819_c1_g1_i3.p1","103-789[-]","ANTR1_ARATH^ANTR1_ARATH^Q:1-213,H:1-208^58.04%ID^E:9e-72^RecName: Full=Sodium-dependent phosphate transport protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^114-213^E:8.1e-16",".",".","ENOG410XPWC^solute carrier family 17","KEGG:ath:AT2G29650","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009579^cellular_component^thylakoid`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0009416^biological_process^response to light stimulus`GO:0009624^biological_process^response to nematode`GO:0006814^biological_process^sodium ion transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN42069_c0_g1","leaves S. yangii","roots S. yangii",4.12580219880083,0,0,"TRINITY_DN42069_c0_g1_i5","LPA1_ARATH^LPA1_ARATH^Q:1495-356,H:74-453^77.89%ID^E:0^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42069_c0_g1_i5.p1","353-1729[-]","LPA1_ARATH^LPA1_ARATH^Q:79-458,H:74-453^77.89%ID^E:0^RecName: Full=Protein LOW PSII ACCUMULATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07719.14^TPR_2^Tetratricopeptide repeat^80-112^E:2.1e-05`PF13181.3^TPR_8^Tetratricopeptide repeat^80-112^E:0.0055`PF13432.3^TPR_16^Tetratricopeptide repeat^85-147^E:0.0015`PF11998.5^DUF3493^Protein of unknown function (DUF3493)^188-265^E:1.2e-24",".",".","ENOG410YYDP^Protein of unknown function (DUF3493)","KEGG:ath:AT1G02910","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010270^biological_process^photosystem II oxygen evolving complex assembly","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46188_c1_g5","leaves S. yangii","roots S. yangii",4.11735378305637,0,0,"TRINITY_DN46188_c1_g5_i1","PTR18_ARATH^PTR18_ARATH^Q:2-475,H:176-336^67.08%ID^E:3e-72^RecName: Full=Protein NRT1/ PTR FAMILY 3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46188_c1_g5_i1.p1","2-520[+]","PTR18_ARATH^PTR18_ARATH^Q:1-173,H:176-351^67.05%ID^E:5e-79^RecName: Full=Protein NRT1/ PTR FAMILY 3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^7-173^E:1.3e-28",".",".","COG3104^transporter","KEGG:ath:AT1G68570","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0042128^biological_process^nitrate assimilation","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46781_c1_g3","leaves S. yangii","roots S. yangii",4.11584697299279,0,0,"TRINITY_DN46781_c1_g3_i4","F3PH_ARATH^F3PH_ARATH^Q:115-1212,H:24-383^40.71%ID^E:1e-96^RecName: Full=Flavonoid 3'-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`F3PH_ARATH^F3PH_ARATH^Q:1292-1663,H:381-508^39.84%ID^E:1e-96^RecName: Full=Flavonoid 3'-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46781_c1_g3_i4.p1","1-1263[+]","F3PH_ARATH^F3PH_ARATH^Q:21-404,H:4-383^39.64%ID^E:1e-84^RecName: Full=Flavonoid 3'-monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^49-407^E:3.6e-64",".",".","COG2124^Cytochrome p450","KEGG:ath:AT5G07990`KO:K05280","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0016711^molecular_function^flavonoid 3'-monooxygenase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0009733^biological_process^response to auxin`GO:0044550^biological_process^secondary metabolite biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN39042_c0_g1","leaves S. yangii","roots S. yangii",4.10777510079964,0,0,"TRINITY_DN39042_c0_g1_i1","QORH_ARATH^QORH_ARATH^Q:1202-216,H:1-329^78.42%ID^E:0^RecName: Full=Putative quinone-oxidoreductase homolog, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39042_c0_g1_i1.p1","213-1202[-]","QORH_ARATH^QORH_ARATH^Q:1-329,H:1-329^78.42%ID^E:0^RecName: Full=Putative quinone-oxidoreductase homolog, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^34-95^E:1.6e-07`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^167-273^E:1.4e-11`PF13602.3^ADH_zinc_N_2^Zinc-binding dehydrogenase^198-327^E:2e-20",".",".","COG0604^alcohol dehydrogenase","KEGG:ath:AT4G13010","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0016491^molecular_function^oxidoreductase activity`GO:0008270^molecular_function^zinc ion binding","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44010_c2_g7","leaves S. yangii","roots S. yangii",4.10653255208465,0,0,"TRINITY_DN44010_c2_g7_i1","CHI5_ARATH^CHI5_ARATH^Q:1131-391,H:24-273^59.52%ID^E:3e-95^RecName: Full=Endochitinase EP3 {ECO:0000303|PubMed:11525512};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44010_c2_g7_i1.p1","388-1185[-]","CHI5_ARATH^CHI5_ARATH^Q:1-265,H:6-273^56.67%ID^E:4e-101^RecName: Full=Endochitinase EP3 {ECO:0000303|PubMed:11525512};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00187.16^Chitin_bind_1^Chitin recognition protein^23-56^E:7.4e-08`PF00182.16^Glyco_hydro_19^Chitinase class I^67-265^E:3.7e-47","sigP:1^23^0.916^YES",".","COG3979^chitinase","KEGG:ath:AT3G54420`KO:K01183","GO:0005618^cellular_component^cell wall`GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0016998^biological_process^cell wall macromolecule catabolic process`GO:0006032^biological_process^chitin catabolic process`GO:0006952^biological_process^defense response`GO:0000272^biological_process^polysaccharide catabolic process`GO:0009617^biological_process^response to bacterium`GO:0009611^biological_process^response to wounding`GO:0010262^biological_process^somatic embryogenesis","GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0016998^biological_process^cell wall macromolecule catabolic process",".","."]
["TRINITY_DN41937_c0_g1","leaves S. yangii","roots S. yangii",4.09618873520393,0,0,"TRINITY_DN41937_c0_g1_i5","MAP1B_ARATH^MAP1B_ARATH^Q:1733-933,H:55-321^73.78%ID^E:2e-118^RecName: Full=Methionine aminopeptidase 1B, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03174};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MAP1B_ARATH^MAP1B_ARATH^Q:744-604,H:322-368^82.98%ID^E:1e-16^RecName: Full=Methionine aminopeptidase 1B, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03174};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41937_c0_g1_i5.p1","906-1874[-]","MAP1B_ARATH^MAP1B_ARATH^Q:48-314,H:55-321^73.78%ID^E:2e-146^RecName: Full=Methionine aminopeptidase 1B, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03174};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00557.21^Peptidase_M24^Metallopeptidase family M24^127-314^E:1.4e-43",".",".","COG0024^Removes the N-terminal methionine from nascent proteins (By similarity)","KEGG:ath:AT1G13270`KO:K01265","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0004177^molecular_function^aminopeptidase activity`GO:0046872^molecular_function^metal ion binding`GO:0008235^molecular_function^metalloexopeptidase activity`GO:0031365^biological_process^N-terminal protein amino acid modification",".",".","."]
["TRINITY_DN46306_c3_g3","leaves S. yangii","roots S. yangii",4.09617010735734,0,0,"TRINITY_DN46306_c3_g3_i1","WRK19_ARATH^WRK19_ARATH^Q:1172-1840,H:91-284^51.57%ID^E:9e-56^RecName: Full=Probable WRKY transcription factor 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WRK19_ARATH^WRK19_ARATH^Q:1427-2002,H:100-286^53.65%ID^E:2e-47^RecName: Full=Probable WRKY transcription factor 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WRK19_ARATH^WRK19_ARATH^Q:1700-2005,H:91-187^46.08%ID^E:2e-17^RecName: Full=Probable WRKY transcription factor 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46306_c3_g3_i1.p1","491-2362[+]","WRK19_ARATH^WRK19_ARATH^Q:228-427,H:91-286^56.5%ID^E:2e-58^RecName: Full=Probable WRKY transcription factor 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WRK19_ARATH^WRK19_ARATH^Q:310-504,H:97-286^53.85%ID^E:1e-49^RecName: Full=Probable WRKY transcription factor 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WRK19_ARATH^WRK19_ARATH^Q:354-505,H:91-237^55.92%ID^E:9e-42^RecName: Full=Probable WRKY transcription factor 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WRK19_ARATH^WRK19_ARATH^Q:228-310,H:216-298^48.19%ID^E:4e-14^RecName: Full=Probable WRKY transcription factor 19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XQGS^mitogen-activated protein kinase kinase kinase","KEGG:ath:AT4G12020","GO:0009941^cellular_component^chloroplast envelope`GO:0005634^cellular_component^nucleus`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006952^biological_process^defense response`GO:0007165^biological_process^signal transduction`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44160_c0_g1","leaves S. yangii","roots S. yangii",4.09322948066318,0,0,"TRINITY_DN44160_c0_g1_i3","ENOX_SOLLC^ENOX_SOLLC^Q:1680-2825,H:1-388^73.4%ID^E:2e-140^RecName: Full=2-methylene-furan-3-one reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44160_c0_g1_i3.p1","1680-2828[+]","ENOX_SOLLC^ENOX_SOLLC^Q:1-382,H:1-388^73.4%ID^E:2e-180^RecName: Full=2-methylene-furan-3-one reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^102-165^E:4.4e-09`PF07709.8^SRR^Seven Residue Repeat^207-216^E:110`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^234-322^E:4.1e-12`PF13602.3^ADH_zinc_N_2^Zinc-binding dehydrogenase^267-378^E:7.6e-19`PF07709.8^SRR^Seven Residue Repeat^356-368^E:26",".",".","COG0604^alcohol dehydrogenase","KEGG:sly:101250690`KO:K18980","GO:0009507^cellular_component^chloroplast`GO:0016491^molecular_function^oxidoreductase activity`GO:0008270^molecular_function^zinc ion binding","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47401_c3_g1","leaves S. yangii","roots S. yangii",4.08260621988149,0,0,"TRINITY_DN47401_c3_g1_i1","ISCAP_ARATH^ISCAP_ARATH^Q:642-259,H:53-180^80.47%ID^E:1e-70^RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47401_c3_g1_i1.p1","256-948[-]","ISCAP_ARATH^ISCAP_ARATH^Q:103-230,H:53-180^80.47%ID^E:3e-72^RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01521.17^Fe-S_biosyn^Iron-sulphur cluster biosynthesis^122-224^E:2.5e-22",".",".","COG0316^Iron--sulfur cluster","KEGG:ath:AT1G10500`KO:K13628","GO:0009570^cellular_component^chloroplast stroma`GO:0005759^cellular_component^mitochondrial matrix`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0008198^molecular_function^ferrous iron binding`GO:0005198^molecular_function^structural molecule activity`GO:0016226^biological_process^iron-sulfur cluster assembly`GO:0097428^biological_process^protein maturation by iron-sulfur cluster transfer`GO:0006790^biological_process^sulfur compound metabolic process",".",".","."]
["TRINITY_DN40823_c0_g1","leaves S. yangii","roots S. yangii",4.079224047398,0,0,"TRINITY_DN40823_c0_g1_i1","TRL22_ARATH^TRL22_ARATH^Q:498-740,H:67-145^66.67%ID^E:6e-29^RecName: Full=Thioredoxin-like 2-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40823_c0_g1_i1.p1","342-824[+]","TRL22_ARATH^TRL22_ARATH^Q:53-133,H:67-145^66.67%ID^E:1e-30^RecName: Full=Thioredoxin-like 2-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00085.17^Thioredoxin^Thioredoxin^97-133^E:1.4e-06",".",".","COG0526^Thioredoxin","KEGG:ath:AT4G29670","GO:0009507^cellular_component^chloroplast`GO:0016671^molecular_function^oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis`GO:0034599^biological_process^cellular response to oxidative stress`GO:0006662^biological_process^glycerol ether metabolic process`GO:0006457^biological_process^protein folding`GO:0000103^biological_process^sulfate assimilation","GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN47080_c3_g1","leaves S. yangii","roots S. yangii",4.07751379020473,0,0,"TRINITY_DN47080_c3_g1_i16","CLPX3_ARATH^CLPX3_ARATH^Q:4110-2767,H:1-419^54.56%ID^E:5e-122^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPX3_ARATH^CLPX3_ARATH^Q:2176-1766,H:411-547^82.48%ID^E:2e-77^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPX3_ARATH^CLPX3_ARATH^Q:1676-1386,H:545-641^59.79%ID^E:2e-77^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47080_c3_g1_i16.p1","2728-4110[-]","CLPX3_ARATH^CLPX3_ARATH^Q:1-448,H:1-419^53.35%ID^E:2e-136^RecName: Full=CLP protease regulatory subunit CLPX3, mitochondrial {ECO:0000303|Ref.4};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^336-444^E:4e-31`PF07728.11^AAA_5^AAA domain (dynein-related subfamily)^339-417^E:1.4e-05`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^340-446^E:1.2e-14",".",".","COG1219^ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)","KEGG:ath:AT1G33360`KO:K03544","GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0008233^molecular_function^peptidase activity`GO:0006457^biological_process^protein folding","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN44053_c1_g2","leaves S. yangii","roots S. yangii",4.07015371477457,0,0,"TRINITY_DN44053_c1_g2_i2","DHAR3_ARATH^DHAR3_ARATH^Q:3005-2520,H:1-152^57.41%ID^E:1e-48^RecName: Full=Glutathione S-transferase DHAR3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DHAR3_ARATH^DHAR3_ARATH^Q:533-309,H:184-258^77.33%ID^E:9e-31^RecName: Full=Glutathione S-transferase DHAR3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DHAR3_ARATH^DHAR3_ARATH^Q:1259-1143,H:145-183^71.79%ID^E:2e-09^RecName: Full=Glutathione S-transferase DHAR3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44053_c1_g2_i2.p1","2490-3005[-]","DHAR3_ARATH^DHAR3_ARATH^Q:1-162,H:1-152^56.71%ID^E:1e-54^RecName: Full=Glutathione S-transferase DHAR3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^75-143^E:7.8e-19`PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^75-132^E:2.3e-06`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^76-138^E:1.6e-14",".",".","ENOG4110FKA^Chloride intracellular channel","KEGG:ath:AT5G16710","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0045174^molecular_function^glutathione dehydrogenase (ascorbate) activity`GO:0004364^molecular_function^glutathione transferase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0006749^biological_process^glutathione metabolic process`GO:0010731^biological_process^protein glutathionylation`GO:0009735^biological_process^response to cytokinin","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44372_c0_g1","leaves S. yangii","roots S. yangii",4.06797459185308,0,0,"TRINITY_DN44372_c0_g1_i14","AHL1_ARATH^AHL1_ARATH^Q:628-308,H:171-280^40.91%ID^E:5e-14^RecName: Full=AT-hook motif nuclear-localized protein 1 {ECO:0000303|PubMed:15604740};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44372_c0_g1_i14.p1","281-631[-]","AHL1_ARATH^AHL1_ARATH^Q:1-108,H:170-280^49.55%ID^E:6e-25^RecName: Full=AT-hook motif nuclear-localized protein 1 {ECO:0000303|PubMed:15604740};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03479.12^DUF296^Domain of unknown function (DUF296)^2-109^E:1.9e-17",".",".","ENOG410YFD3^AT hook motif domain containing protein, expressed","KEGG:ath:AT4G12080","GO:0098687^cellular_component^chromosomal region`GO:0005737^cellular_component^cytoplasm`GO:0005739^cellular_component^mitochondrion`GO:0005730^cellular_component^nucleolus`GO:0005654^cellular_component^nucleoplasm`GO:0005634^cellular_component^nucleus`GO:0003680^molecular_function^AT DNA binding`GO:0003677^molecular_function^DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44595_c4_g4","leaves S. yangii","roots S. yangii",4.06688899024518,0,0,"TRINITY_DN44595_c4_g4_i5","AAPC_CENCI^AAPC_CENCI^Q:1048-230,H:25-312^36.05%ID^E:3e-38^RecName: Full=Putative glucose-6-phosphate 1-epimerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Cenchrus",".","TRINITY_DN44595_c4_g4_i5.p1","227-1147[-]","AAPC_CENCI^AAPC_CENCI^Q:45-306,H:33-312^36.04%ID^E:2e-39^RecName: Full=Putative glucose-6-phosphate 1-epimerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Cenchrus","PF01263.17^Aldose_epim^Aldose 1-epimerase^48-299^E:3.8e-39",".",".",".",".","GO:0030246^molecular_function^carbohydrate binding`GO:0047938^molecular_function^glucose-6-phosphate 1-epimerase activity`GO:0005975^biological_process^carbohydrate metabolic process","GO:0016853^molecular_function^isomerase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN42835_c5_g4","leaves S. yangii","roots S. yangii",4.05539231890366,0,0,"TRINITY_DN42835_c5_g4_i1","RAV2_ARATH^RAV2_ARATH^Q:1059-79,H:32-352^62.54%ID^E:2e-123^RecName: Full=AP2/ERF and B3 domain-containing transcription repressor RAV2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42835_c5_g4_i1.p1","76-1122[-]","RAVL1_ARATH^RAVL1_ARATH^Q:7-348,H:8-361^60.65%ID^E:8e-136^RecName: Full=AP2/ERF and B3 domain-containing transcription repressor TEM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^55-103^E:7.3e-09`PF02362.18^B3^B3 DNA binding domain^181-280^E:2.9e-28",".",".","ENOG4110AU5^AP2 ERF and B3 domain-containing","KEGG:ath:AT1G25560`KO:K09287","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0048573^biological_process^photoperiodism, flowering`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN44186_c4_g4","leaves S. yangii","roots S. yangii",4.05037401893767,0,0,"TRINITY_DN44186_c4_g4_i7","CCD_CROSA^CCD_CROSA^Q:1151-243,H:233-535^83.17%ID^E:0^RecName: Full=Carotenoid 9,10(9',10')-cleavage dioxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Iridaceae; Crocus",".","TRINITY_DN44186_c4_g4_i7.p1","210-1142[-]","CCD_CROSA^CCD_CROSA^Q:1-307,H:236-542^83.39%ID^E:0^RecName: Full=Carotenoid 9,10(9',10')-cleavage dioxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Iridaceae; Crocus","PF03055.12^RPE65^Retinal pigment epithelial membrane protein^1-299^E:4.8e-75",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0051213^molecular_function^dioxygenase activity`GO:0046872^molecular_function^metal ion binding","GO:0016702^molecular_function^oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46899_c0_g1","leaves S. yangii","roots S. yangii",4.04769550294082,0,0,"TRINITY_DN46899_c0_g1_i12","PTC52_ARATH^PTC52_ARATH^Q:1637-249,H:84-557^59.59%ID^E:0^RecName: Full=Protochlorophyllide-dependent translocon component 52, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46899_c0_g1_i12.p1","240-1895[-]","PTC52_ARATH^PTC52_ARATH^Q:68-549,H:65-557^59.41%ID^E:0^RecName: Full=Protochlorophyllide-dependent translocon component 52, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00355.23^Rieske^Rieske [2Fe-2S] domain^87-170^E:1.4e-17`PF08417.9^PaO^Pheophorbide a oxygenase^302-412^E:1.4e-25",".",".","COG4638^rieske 2fe-2S domain-containing protein","KEGG:ath:AT4G25650","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009536^cellular_component^plastid`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0010277^molecular_function^chlorophyllide a oxygenase [overall] activity`GO:0046872^molecular_function^metal ion binding`GO:0015031^biological_process^protein transport","GO:0016491^molecular_function^oxidoreductase activity`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0055114^biological_process^oxidation-reduction process`GO:0010277^molecular_function^chlorophyllide a oxygenase [overall] activity",".","."]
["TRINITY_DN44831_c0_g4","leaves S. yangii","roots S. yangii",4.03994770391935,0,0,"TRINITY_DN44831_c0_g4_i3","TKPR1_ARATH^TKPR1_ARATH^Q:1315-779,H:36-213^50.28%ID^E:2e-52^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TKPR1_ARATH^TKPR1_ARATH^Q:1466-1374,H:8-38^70.97%ID^E:2e-52^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44831_c0_g4_i3.p1","734-1405[-]","TKPR1_ARATH^TKPR1_ARATH^Q:31-209,H:36-213^50.28%ID^E:8e-54^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^45-194^E:2e-11`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^55-182^E:6.5e-12`PF07993.9^NAD_binding_4^Male sterility protein^61-194^E:1.3e-07",".",".","COG0451^Nad-dependent epimerase dehydratase","KEGG:ath:AT4G35420","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005634^cellular_component^nucleus`GO:0050662^molecular_function^coenzyme binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0009555^biological_process^pollen development`GO:0010584^biological_process^pollen exine formation`GO:0048316^biological_process^seed development`GO:0080110^biological_process^sporopollenin biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44017_c3_g1","leaves S. yangii","roots S. yangii",4.03228868781689,0,0,"TRINITY_DN44017_c3_g1_i11","NYC1_ARATH^NYC1_ARATH^Q:1366-461,H:194-496^78.88%ID^E:2e-179^RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NYC1_ARATH^NYC1_ARATH^Q:2133-1468,H:1-193^46.09%ID^E:2e-179^RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44017_c3_g1_i11.p1","458-1399[-]","NYC1_ORYSJ^NYC1_ORYSJ^Q:12-313,H:203-504^79.14%ID^E:5e-179^RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00106.22^adh_short^short chain dehydrogenase^41-185^E:1.2e-28`PF13561.3^adh_short_C2^Enoyl-(Acyl carrier protein) reductase^45-191^E:3.1e-24",".",".","COG1028^Dehydrogenase reductase","KEGG:osa:4327178`KO:K13606","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009536^cellular_component^plastid`GO:0034256^molecular_function^chlorophyll(ide) b reductase activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0015996^biological_process^chlorophyll catabolic process`GO:0010304^biological_process^PSII associated light-harvesting complex II catabolic process",".",".","."]
["TRINITY_DN44868_c4_g1","leaves S. yangii","roots S. yangii",4.03127115155984,0,0,"TRINITY_DN44868_c4_g1_i5","FAO2_LOTJA^FAO2_LOTJA^Q:1-2253,H:3-748^58.03%ID^E:0^RecName: Full=Long-chain-alcohol oxidase FAO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN44868_c4_g1_i5.p1","1-2259[+]","FAO2_LOTJA^FAO2_LOTJA^Q:1-751,H:3-748^58.03%ID^E:0^RecName: Full=Long-chain-alcohol oxidase FAO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus","PF00890.21^FAD_binding_2^FAD binding domain^250-282^E:1.3e-05`PF00732.16^GMC_oxred_N^GMC oxidoreductase^251-513^E:3e-69`PF13450.3^NAD_binding_8^NAD(P)-binding Rossmann-like domain^253-284^E:0.00015`PF05199.10^GMC_oxred_C^GMC oxidoreductase^607-740^E:6.7e-21",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0046577^molecular_function^long-chain-alcohol oxidase activity","GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45238_c2_g6","leaves S. yangii","roots S. yangii",4.01001176939171,0,0,"TRINITY_DN45238_c2_g6_i1","AMO_ARATH^AMO_ARATH^Q:369-1634,H:53-475^57.41%ID^E:6e-155^RecName: Full=Primary amine oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AMO_ARATH^AMO_ARATH^Q:2771-3526,H:460-712^67.98%ID^E:5e-112^RecName: Full=Primary amine oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45238_c2_g6_i1.p1","165-1700[+]","AMO_ARATH^AMO_ARATH^Q:69-490,H:53-475^57.41%ID^E:7e-171^RecName: Full=Primary amine oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02727.13^Cu_amine_oxidN2^Copper amine oxidase, N2 domain^76-154^E:7.1e-24`PF02728.13^Cu_amine_oxidN3^Copper amine oxidase, N3 domain^168-267^E:1.5e-24`PF01179.17^Cu_amine_oxid^Copper amine oxidase, enzyme domain^291-482^E:2.6e-59","sigP:1^28^0.765^YES",".","COG3733^amine oxidase","KEGG:ath:AT1G62810`KO:K00276","GO:0052595^molecular_function^aliphatic-amine oxidase activity`GO:0052594^molecular_function^aminoacetone:oxygen oxidoreductase(deaminating) activity`GO:0005507^molecular_function^copper ion binding`GO:0052596^molecular_function^phenethylamine:oxygen oxidoreductase (deaminating) activity`GO:0008131^molecular_function^primary amine oxidase activity`GO:0048038^molecular_function^quinone binding`GO:0052593^molecular_function^tryptamine:oxygen oxidoreductase (deaminating) activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009308^biological_process^amine metabolic process`GO:0006809^biological_process^nitric oxide biosynthetic process","GO:0005507^molecular_function^copper ion binding`GO:0008131^molecular_function^primary amine oxidase activity`GO:0048038^molecular_function^quinone binding`GO:0009308^biological_process^amine metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45960_c10_g1","leaves S. yangii","roots S. yangii",3.99486245088766,0,0,"TRINITY_DN45960_c10_g1_i1","PP420_ARATH^PP420_ARATH^Q:295-2220,H:62-702^71.52%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g46580, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45960_c10_g1_i1.p1","121-2256[+]","PP420_ARATH^PP420_ARATH^Q:16-703,H:20-705^68.06%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g46580, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^208-264^E:5.8e-06`PF01535.17^PPR^PPR repeat^219-244^E:0.035`PF01535.17^PPR^PPR repeat^254-279^E:7.8e-05`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^269-370^E:2.6e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^281-335^E:1.2e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^310-370^E:1.7e-12`PF12854.4^PPR_1^PPR repeat^318-350^E:1.9e-06`PF13041.3^PPR_2^PPR repeat family^321-367^E:2.4e-12`PF01535.17^PPR^PPR repeat^324-354^E:3.3e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^344-388^E:0.0067`PF01535.17^PPR^PPR repeat^360-388^E:0.0011`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^374-527^E:1.2e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^383-440^E:7.2e-05`PF13041.3^PPR_2^PPR repeat family^394-437^E:5.8e-10`PF01535.17^PPR^PPR repeat^395-421^E:8.2e-06`PF12854.4^PPR_1^PPR repeat^424-456^E:3.6e-06`PF01535.17^PPR^PPR repeat^431-460^E:9.4e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^451-497^E:4.5e-05",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G46580","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN46356_c0_g1","leaves S. yangii","roots S. yangii",3.97190888497336,0,0,"TRINITY_DN46356_c0_g1_i1","Y3028_ARATH^Y3028_ARATH^Q:91-1404,H:1-440^35.65%ID^E:1e-77^RecName: Full=Uncharacterized acetyltransferase At3g50280;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46356_c0_g1_i1.p1","91-1419[+]","Y3028_ARATH^Y3028_ARATH^Q:1-438,H:1-440^36.16%ID^E:2e-83^RecName: Full=Uncharacterized acetyltransferase At3g50280;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02458.12^Transferase^Transferase family^18-437^E:7e-75",".",".","ENOG410YEZS^Transferase Family","KEGG:ath:AT3G50280","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN47426_c7_g1","leaves S. yangii","roots S. yangii",3.97179772285876,0,0,"TRINITY_DN47426_c7_g1_i3","PAP1_ARATH^PAP1_ARATH^Q:800-1102,H:212-312^79.21%ID^E:4e-46^RecName: Full=Probable plastid-lipid-associated protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PAP1_ARATH^PAP1_ARATH^Q:223-423,H:150-215^74.63%ID^E:5e-21^RecName: Full=Probable plastid-lipid-associated protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47426_c7_g1_i3.p2","788-1123[+]","LIPC_SOLTU^LIPC_SOLTU^Q:5-109,H:220-324^80%ID^E:2e-53^RecName: Full=Light-induced protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF04755.9^PAP_fibrillin^PAP_fibrillin^5-101^E:2.3e-26",".",".","ENOG4111PVP^negative regulation of photosynthesis, light reaction","KEGG:sot:102584168","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0006950^biological_process^response to stress",".",".","."]
["TRINITY_DN44465_c0_g1","leaves S. yangii","roots S. yangii",3.97040406327582,0,0,"TRINITY_DN44465_c0_g1_i8","PAE12_ARATH^PAE12_ARATH^Q:1958-1197,H:162-415^74.02%ID^E:6e-134^RecName: Full=Pectin acetylesterase 12 {ECO:0000303|PubMed:25115560};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PAE12_ARATH^PAE12_ARATH^Q:2767-2315,H:27-174^59.6%ID^E:2e-52^RecName: Full=Pectin acetylesterase 12 {ECO:0000303|PubMed:25115560};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44465_c0_g1_i8.p1","2141-2869[-]","PAE10_ARATH^PAE10_ARATH^Q:35-184,H:27-174^62.67%ID^E:4e-61^RecName: Full=Pectin acetylesterase 10 {ECO:0000303|PubMed:25115560};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03283.10^PAE^Pectinacetylesterase^59-185^E:6.4e-55","sigP:1^19^0.827^YES",".","ENOG410XQKD^pectinacetylesterase","KEGG:ath:AT5G26670","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0016787^molecular_function^hydrolase activity`GO:0071555^biological_process^cell wall organization","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN42907_c0_g1","leaves S. yangii","roots S. yangii",3.95841187572048,0,0,"TRINITY_DN42907_c0_g1_i7","PGMP_SOLTU^PGMP_SOLTU^Q:606-307,H:163-262^93%ID^E:3e-51^RecName: Full=Phosphoglucomutase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`PGMP_SOLTU^PGMP_SOLTU^Q:1193-924,H:74-163^90%ID^E:5e-37^RecName: Full=Phosphoglucomutase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN42907_c0_g1_i7.p1","906-1430[-]","PGMP_BRANA^PGMP_BRANA^Q:53-170,H:46-161^72.88%ID^E:4e-47^RecName: Full=Phosphoglucomutase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica","PF02878.13^PGM_PMM_I^Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I^95-168^E:5.9e-17",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0000287^molecular_function^magnesium ion binding`GO:0004614^molecular_function^phosphoglucomutase activity`GO:0006006^biological_process^glucose metabolic process","GO:0016868^molecular_function^intramolecular transferase activity, phosphotransferases`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45714_c1_g3","leaves S. yangii","roots S. yangii",3.95535730684329,0,0,"TRINITY_DN45714_c1_g3_i1","AB5F_ARATH^AB5F_ARATH^Q:187-1929,H:1-555^71.23%ID^E:0^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB5F_ARATH^AB5F_ARATH^Q:2019-2258,H:549-628^88.75%ID^E:1e-38^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB5F_ARATH^AB5F_ARATH^Q:664-1299,H:461-629^27.7%ID^E:3e-11^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB5F_ARATH^AB5F_ARATH^Q:2019-2258,H:265-344^37.5%ID^E:4e-06^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45714_c1_g3_i1.p1","187-1920[+]","AB5F_ARATH^AB5F_ARATH^Q:1-577,H:1-551^72.54%ID^E:0^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB5F_ARATH^AB5F_ARATH^Q:117-371,H:418-629^27.73%ID^E:1e-22^RecName: Full=ABC transporter F family member 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^139-314^E:3.1e-25`PF12848.4^ABC_tran_Xtn^ABC transporter^353-440^E:7.2e-18`PF00005.24^ABC_tran^ABC transporter^467-577^E:1.4e-18",".",".","COG0488^(ABC) transporter","KEGG:ath:AT5G64840","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0005215^molecular_function^transporter activity`GO:0009624^biological_process^response to nematode","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN47448_c1_g1","leaves S. yangii","roots S. yangii",3.9452588645241,0,0,"TRINITY_DN47448_c1_g1_i12","NFD4_ARATH^NFD4_ARATH^Q:1422-751,H:338-563^26.18%ID^E:1e-11^RecName: Full=Protein NUCLEAR FUSION DEFECTIVE 4 {ECO:0000303|PubMed:16698901};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NFD4_ARATH^NFD4_ARATH^Q:2319-1846,H:43-195^32.28%ID^E:4e-11^RecName: Full=Protein NUCLEAR FUSION DEFECTIVE 4 {ECO:0000303|PubMed:16698901};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47448_c1_g1_i12.p1","685-2364[-]","NFD4_ARATH^NFD4_ARATH^Q:16-538,H:43-563^24.86%ID^E:4e-29^RecName: Full=Protein NUCLEAR FUSION DEFECTIVE 4 {ECO:0000303|PubMed:16698901};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06813.10^Nodulin-like^Nodulin-like^16-263^E:2.6e-67`PF07690.13^MFS_1^Major Facilitator Superfamily^342-535^E:1.7e-13",".",".","ENOG41105RT^Nodulin-like","KEGG:ath:AT1G31470","GO:0016021^cellular_component^integral component of membrane`GO:0000741^biological_process^karyogamy`GO:0010197^biological_process^polar nucleus fusion`GO:0009651^biological_process^response to salt stress`GO:0006810^biological_process^transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46659_c0_g2","leaves S. yangii","roots S. yangii",3.94069982976086,0,0,"TRINITY_DN46659_c0_g2_i2","PAP_CITUN^PAP_CITUN^Q:429-851,H:8-168^53.09%ID^E:1e-36^RecName: Full=Plastid-lipid-associated protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus",".","TRINITY_DN46659_c0_g2_i2.p1","375-863[+]","PAP_CITUN^PAP_CITUN^Q:12-159,H:1-168^56.21%ID^E:2e-45^RecName: Full=Plastid-lipid-associated protein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus","PF04755.9^PAP_fibrillin^PAP_fibrillin^89-160^E:2.5e-26",".",".",".",".","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN44558_c1_g3","leaves S. yangii","roots S. yangii",3.92593226011107,0,0,"TRINITY_DN44558_c1_g3_i1","PTR27_ARATH^PTR27_ARATH^Q:266-610,H:1-115^77.39%ID^E:1e-42^RecName: Full=Protein NRT1/ PTR FAMILY 6.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44558_c1_g3_i1.p1","266-664[+]","PTR27_ARATH^PTR27_ARATH^Q:1-115,H:1-115^77.39%ID^E:2e-44^RecName: Full=Protein NRT1/ PTR FAMILY 6.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG3104^transporter","KEGG:ath:AT2G26690","GO:0016021^cellular_component^integral component of membrane`GO:0015293^molecular_function^symporter activity`GO:0042128^biological_process^nitrate assimilation`GO:0006857^biological_process^oligopeptide transport`GO:0009753^biological_process^response to jasmonic acid`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN31550_c0_g1","leaves S. yangii","roots S. yangii",3.91816014359839,0,0,"TRINITY_DN31550_c0_g1_i1","CAR7_ARATH^CAR7_ARATH^Q:373-942,H:3-165^48.42%ID^E:1e-55^RecName: Full=Protein C2-DOMAIN ABA-RELATED 7 {ECO:0000303|PubMed:25465408};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN31550_c0_g1_i1.p1","370-951[+]","CAR7_ARATH^CAR7_ARATH^Q:2-191,H:3-165^48.42%ID^E:3e-58^RecName: Full=Protein C2-DOMAIN ABA-RELATED 7 {ECO:0000303|PubMed:25465408};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^5-116^E:8.3e-16",".",".","COG5038^Domain-Containing protein","KEGG:ath:AT1G70810","GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005096^molecular_function^GTPase activator activity`GO:0046872^molecular_function^metal ion binding`GO:0005543^molecular_function^phospholipid binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009789^biological_process^positive regulation of abscisic acid-activated signaling pathway`GO:0043547^biological_process^positive regulation of GTPase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45993_c0_g2","leaves S. yangii","roots S. yangii",3.90284823729063,0,0,"TRINITY_DN45993_c0_g2_i27","GLGB1_PEA^GLGB1_PEA^Q:331-1887,H:1-508^67.43%ID^E:0^RecName: Full=1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`GLGB1_PEA^GLGB1_PEA^Q:2055-2729,H:495-716^81.33%ID^E:2e-122^RecName: Full=1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`GLGB1_PEA^GLGB1_PEA^Q:3121-3210,H:717-746^80%ID^E:8e-07^RecName: Full=1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN45993_c0_g2_i27.p1","331-1908[+]","GLGB1_PEA^GLGB1_PEA^Q:1-519,H:1-508^67.43%ID^E:0^RecName: Full=1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF02922.15^CBM_48^Carbohydrate-binding module 48 (Isoamylase N-terminal domain)^223-306^E:8.8e-18`PF00128.21^Alpha-amylase^Alpha amylase, catalytic domain^372-443^E:5.3e-12",".",".",".",".","GO:0009501^cellular_component^amyloplast`GO:0009507^cellular_component^chloroplast`GO:0003844^molecular_function^1,4-alpha-glucan branching enzyme activity`GO:0043169^molecular_function^cation binding`GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0009790^biological_process^embryo development`GO:0019252^biological_process^starch biosynthetic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process`GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN45992_c0_g2","leaves S. yangii","roots S. yangii",3.89265715475681,0,0,"TRINITY_DN45992_c0_g2_i9","TATC_PEA^TATC_PEA^Q:304-1179,H:49-353^72.79%ID^E:5e-128^RecName: Full=Sec-independent protein translocase protein TATC, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN45992_c0_g2_i9.p1","142-1182[+]","TATC_ARATH^TATC_ARATH^Q:60-346,H:59-340^73.87%ID^E:4e-140^RecName: Full=Sec-independent protein translocase protein TATC, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00902.15^TatC^Sec-independent protein translocase protein (TatC)^121-329^E:2.5e-60",".",".","COG0805^Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (By similarity)","KEGG:ath:AT2G01110`KO:K03118","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0031361^cellular_component^integral component of thylakoid membrane`GO:0043235^cellular_component^receptor complex`GO:0033281^cellular_component^TAT protein transport complex`GO:0009977^molecular_function^proton motive force dependent protein transmembrane transporter activity`GO:0009567^biological_process^double fertilization forming a zygote and endosperm`GO:0071806^biological_process^protein transmembrane transport`GO:0010027^biological_process^thylakoid membrane organization","GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46012_c0_g2","leaves S. yangii","roots S. yangii",3.89148811947828,0,0,"TRINITY_DN46012_c0_g2_i10","RUB1_BRANA^RUB1_BRANA^Q:2653-3666,H:198-535^86.69%ID^E:0^RecName: Full=RuBisCO large subunit-binding protein subunit alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica`RUB1_BRANA^RUB1_BRANA^Q:1983-2609,H:1-213^83.57%ID^E:2e-105^RecName: Full=RuBisCO large subunit-binding protein subunit alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN46012_c0_g2_i10.p3","2956-3723[+]","RUB1_BRANA^RUB1_BRANA^Q:1-237,H:299-535^85.65%ID^E:8e-142^RecName: Full=RuBisCO large subunit-binding protein subunit alpha, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica","PF00118.21^Cpn60_TCP1^TCP-1/cpn60 chaperonin family^2-233^E:4e-45",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0042026^biological_process^protein refolding","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44713_c0_g2","leaves S. yangii","roots S. yangii",3.87602192733583,0,0,"TRINITY_DN44713_c0_g2_i9","GLNA1_LOTJA^GLNA1_LOTJA^Q:1384-320,H:1-355^92.11%ID^E:0^RecName: Full=Glutamine synthetase cytosolic isozyme;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN44713_c0_g2_i9.p1","314-1384[-]","GLNA1_LOTJA^GLNA1_LOTJA^Q:1-355,H:1-355^92.11%ID^E:0^RecName: Full=Glutamine synthetase cytosolic isozyme;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus","PF03951.16^Gln-synt_N^Glutamine synthetase, beta-Grasp domain^28-97^E:4.8e-10`PF00120.21^Gln-synt_C^Glutamine synthetase, catalytic domain^167-353^E:5.8e-15",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0004356^molecular_function^glutamate-ammonia ligase activity`GO:0006542^biological_process^glutamine biosynthetic process","GO:0004356^molecular_function^glutamate-ammonia ligase activity`GO:0006542^biological_process^glutamine biosynthetic process`GO:0006807^biological_process^nitrogen compound metabolic process",".","."]
["TRINITY_DN44351_c2_g1","leaves S. yangii","roots S. yangii",3.87405440160923,0,0,"TRINITY_DN44351_c2_g1_i1","E13H_TOBAC^E13H_TOBAC^Q:1231-275,H:36-339^50.78%ID^E:1e-88^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44351_c2_g1_i1.p1","272-1231[-]","E13H_TOBAC^E13H_TOBAC^Q:1-319,H:36-339^53.27%ID^E:3e-97^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^2-318^E:6.1e-90",".",".",".",".","GO:0048046^cellular_component^apoplast`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN32215_c0_g1","leaves S. yangii","roots S. yangii",3.8711854925152,0,0,"TRINITY_DN32215_c0_g1_i1","RR20_ARATH^RR20_ARATH^Q:86-430,H:71-187^76.92%ID^E:2e-32^RecName: Full=30S ribosomal protein S20, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32215_c0_g1_i1.p1","2-457[+]","RR20_ARATH^RR20_ARATH^Q:29-144,H:71-188^76.27%ID^E:5e-53^RecName: Full=30S ribosomal protein S20, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01649.15^Ribosomal_S20p^Ribosomal protein S20^44-130^E:3.1e-21",".",".","ENOG41129UT^ribosomal protein S20","KEGG:ath:AT3G15190`KO:K02968","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN38171_c0_g1","leaves S. yangii","roots S. yangii",3.86652044677334,0,0,"TRINITY_DN38171_c0_g1_i2","PLA17_ARATH^PLA17_ARATH^Q:2335-1073,H:87-514^73.32%ID^E:0^RecName: Full=Phospholipase A1-Igamma3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38171_c0_g1_i2.p1","1040-2557[-]","PLA17_ARATH^PLA17_ARATH^Q:75-495,H:87-514^73.32%ID^E:0^RecName: Full=Phospholipase A1-Igamma3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01764.22^Lipase_3^Lipase (class 3)^202-360^E:2.2e-37",".",".","ENOG4111RPC^galactolipase activity","KEGG:ath:AT1G51440","GO:0009507^cellular_component^chloroplast`GO:0047714^molecular_function^galactolipase activity`GO:0008970^molecular_function^phosphatidylcholine 1-acylhydrolase activity`GO:0004806^molecular_function^triglyceride lipase activity`GO:0016042^biological_process^lipid catabolic process","GO:0006629^biological_process^lipid metabolic process",".","."]
["TRINITY_DN38772_c0_g1","leaves S. yangii","roots S. yangii",3.85774564197109,0,0,"TRINITY_DN38772_c0_g1_i3","IPYR6_ARATH^IPYR6_ARATH^Q:203-982,H:40-299^82.31%ID^E:1e-157^RecName: Full=Soluble inorganic pyrophosphatase 6, chloroplastic {ECO:0000303|PubMed:15135060};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38772_c0_g1_i3.p1","107-988[+]","IPYR6_ARATH^IPYR6_ARATH^Q:33-292,H:40-299^82.31%ID^E:1e-159^RecName: Full=Soluble inorganic pyrophosphatase 6, chloroplastic {ECO:0000303|PubMed:15135060};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00719.16^Pyrophosphatase^Inorganic pyrophosphatase^100-277^E:1.3e-47",".",".","COG0221^Pyrophosphate phospho-hydrolase","KEGG:ath:AT5G09650`KO:K01507","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0009579^cellular_component^thylakoid`GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0042742^biological_process^defense response to bacterium`GO:0006796^biological_process^phosphate-containing compound metabolic process`GO:0046686^biological_process^response to cadmium ion`GO:0009651^biological_process^response to salt stress","GO:0000287^molecular_function^magnesium ion binding`GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0006796^biological_process^phosphate-containing compound metabolic process`GO:0005737^cellular_component^cytoplasm",".","."]
["TRINITY_DN43844_c0_g1","leaves S. yangii","roots S. yangii",3.85252839091923,0,0,"TRINITY_DN43844_c0_g1_i4","CLPAA_SOLLC^CLPAA_SOLLC^Q:93-1361,H:502-925^89.62%ID^E:0^RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN43844_c0_g1_i4.p1","210-1367[+]","CLPAB_SOLLC^CLPAB_SOLLC^Q:1-383,H:539-921^89.56%ID^E:0^RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00158.23^Sigma54_activat^Sigma-54 interaction domain^72-202^E:2.6e-06`PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^96-270^E:1.1e-55`PF07728.11^AAA_5^AAA domain (dynein-related subfamily)^101-222^E:5.5e-12`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^102-220^E:3.3e-08`PF10431.6^ClpB_D2-small^C-terminal, D2-small domain, of ClpB protein^277-357^E:5.6e-25",".",".","COG0542^ATP-dependent CLP protease ATP-binding subunit",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0019538^biological_process^protein metabolic process","GO:0005524^molecular_function^ATP binding`GO:0008134^molecular_function^transcription factor binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN47551_c2_g2","leaves S. yangii","roots S. yangii",3.84842870758016,0,0,"TRINITY_DN47551_c2_g2_i1","GME2_ORYSJ^GME2_ORYSJ^Q:1288-194,H:7-371^94.79%ID^E:0^RecName: Full=GDP-mannose 3,5-epimerase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47551_c2_g2_i1.p1","191-1321[-]","GME2_ORYSJ^GME2_ORYSJ^Q:12-376,H:7-371^94.79%ID^E:0^RecName: Full=GDP-mannose 3,5-epimerase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^30-269^E:2.8e-46`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^32-330^E:8.8e-27`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^32-189^E:8.4e-10`PF13460.3^NAD_binding_10^NAD(P)H-binding^34-153^E:2.4e-06",".",".","COG0451^Nad-dependent epimerase dehydratase","KEGG:osa:4350816`KO:K10046","GO:0005829^cellular_component^cytosol`GO:0047918^molecular_function^GDP-mannose 3,5-epimerase activity`GO:0051287^molecular_function^NAD binding`GO:0019853^biological_process^L-ascorbic acid biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN71655_c0_g1","leaves S. yangii","roots S. yangii",3.83856943608019,0,0,"TRINITY_DN71655_c0_g1_i1","HEM11_CUCSA^HEM11_CUCSA^Q:1937-282,H:1-552^82.07%ID^E:0^RecName: Full=Glutamyl-tRNA reductase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN71655_c0_g1_i1.p1","279-1937[-]","HEM11_CUCSA^HEM11_CUCSA^Q:1-552,H:1-552^83.72%ID^E:0^RecName: Full=Glutamyl-tRNA reductase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF05201.12^GlutR_N^Glutamyl-tRNAGlu reductase, N-terminal domain^107-257^E:9.4e-39`PF01488.17^Shikimate_DH^Shikimate / quinate 5-dehydrogenase^272-414^E:1.9e-43`PF03807.14^F420_oxidored^NADP oxidoreductase coenzyme F420-dependent^290-356^E:6.4e-06`PF00745.17^GlutR_dimer^Glutamyl-tRNAGlu reductase, dimerisation domain^428-532^E:1.7e-29",".",".",".","KEGG:csv:101220615`KO:K02492","GO:0009507^cellular_component^chloroplast`GO:0008883^molecular_function^glutamyl-tRNA reductase activity`GO:0050661^molecular_function^NADP binding`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0006782^biological_process^protoporphyrinogen IX biosynthetic process","GO:0008883^molecular_function^glutamyl-tRNA reductase activity`GO:0050661^molecular_function^NADP binding`GO:0033014^biological_process^tetrapyrrole biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43502_c0_g2","leaves S. yangii","roots S. yangii",3.83579828540155,0,0,"TRINITY_DN43502_c0_g2_i2","RR9_SPIOL^RR9_SPIOL^Q:781-299,H:36-197^83.33%ID^E:3e-84^RecName: Full=30S ribosomal protein S9, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN43502_c0_g2_i2.p1","296-931[-]","RR9_SPIOL^RR9_SPIOL^Q:14-211,H:1-197^74.87%ID^E:2e-101^RecName: Full=30S ribosomal protein S9, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00380.16^Ribosomal_S9^Ribosomal protein S9/S16^90-211^E:3.2e-41",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN39632_c0_g1","leaves S. yangii","roots S. yangii",3.83319386073443,0,0,"TRINITY_DN39632_c0_g1_i2","AAED1_ARATH^AAED1_ARATH^Q:9-269,H:143-229^75.86%ID^E:7e-43^RecName: Full=Thioredoxin-like protein AAED1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39632_c0_g1_i2.p1","3-518[+]","AAED1_ARATH^AAED1_ARATH^Q:3-89,H:143-229^75.86%ID^E:1e-44^RecName: Full=Thioredoxin-like protein AAED1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13911.3^AhpC-TSA_2^AhpC/TSA antioxidant enzyme^2-89^E:7.6e-09",".",".","ENOG410XVW9^AhpC/TSA family","KEGG:ath:AT2G37240","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN32925_c0_g1","leaves S. yangii","roots S. yangii",3.8120542239655,0,0,"TRINITY_DN32925_c0_g1_i2","Y5392_ARATH^Y5392_ARATH^Q:844-1875,H:432-769^45.53%ID^E:2e-82^RecName: Full=Probable receptor-like protein kinase At5g39020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32925_c0_g1_i2.p1","199-1998[+]","Y5392_ARATH^Y5392_ARATH^Q:216-570,H:432-780^45.25%ID^E:1e-97^RecName: Full=Probable receptor-like protein kinase At5g39020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^289-555^E:1.8e-49`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^289-557^E:1.2e-45","sigP:1^23^0.875^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G39020","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46659_c1_g2","leaves S. yangii","roots S. yangii",3.79771661180168,0,0,"TRINITY_DN46659_c1_g2_i9","PMGI_MESCR^PMGI_MESCR^Q:3340-1670,H:1-557^88.15%ID^E:0^RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum",".","TRINITY_DN46659_c1_g2_i9.p1","1661-3340[-]","PMGI_MESCR^PMGI_MESCR^Q:1-557,H:1-557^88.15%ID^E:0^RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum","PF01676.15^Metalloenzyme^Metalloenzyme superfamily^20-545^E:1.1e-102`PF06415.10^iPGM_N^BPG-independent PGAM N-terminus (iPGM_N)^101-322^E:1.3e-57",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0030145^molecular_function^manganese ion binding`GO:0004619^molecular_function^phosphoglycerate mutase activity`GO:0006007^biological_process^glucose catabolic process`GO:0006096^biological_process^glycolytic process","GO:0003824^molecular_function^catalytic activity`GO:0046872^molecular_function^metal ion binding`GO:0004619^molecular_function^phosphoglycerate mutase activity`GO:0030145^molecular_function^manganese ion binding`GO:0006007^biological_process^glucose catabolic process`GO:0005737^cellular_component^cytoplasm",".","."]
["TRINITY_DN46869_c3_g4","leaves S. yangii","roots S. yangii",3.79442540395288,0,0,"TRINITY_DN46869_c3_g4_i3","GLR34_ARATH^GLR34_ARATH^Q:3005-570,H:118-932^66.01%ID^E:0^RecName: Full=Glutamate receptor 3.4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46869_c3_g4_i3.p1","504-3002[-]","GLR34_ARATH^GLR34_ARATH^Q:1-811,H:119-932^65.97%ID^E:0^RecName: Full=Glutamate receptor 3.4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01094.25^ANF_receptor^Receptor family ligand binding region^3-316^E:3.4e-62`PF13458.3^Peripla_BP_6^Periplasmic binding protein^5-309^E:1.5e-12`PF10613.6^Lig_chan-Glu_bd^Ligated ion channel L-glutamate- and glycine-binding site^380-477^E:2.3e-11`PF00497.17^SBP_bac_3^Bacterial extracellular solute-binding proteins, family 3^430-717^E:2e-22`PF00060.23^Lig_chan^Ligand-gated ion channel^495-749^E:4.5e-36",".",".","ENOG410ZZ8P^PBPe","KEGG:ath:AT1G05200`KO:K05387","GO:0009507^cellular_component^chloroplast`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009536^cellular_component^plastid`GO:0005262^molecular_function^calcium channel activity`GO:0008066^molecular_function^glutamate receptor activity`GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0015276^molecular_function^ligand-gated ion channel activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0019722^biological_process^calcium-mediated signaling`GO:0071311^biological_process^cellular response to acetate`GO:0071230^biological_process^cellular response to amino acid stimulus`GO:0070417^biological_process^cellular response to cold`GO:0071260^biological_process^cellular response to mechanical stimulus`GO:0034220^biological_process^ion transmembrane transport`GO:0009611^biological_process^response to wounding","GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0005234^molecular_function^extracellular-glutamate-gated ion channel activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45578_c2_g5","leaves S. yangii","roots S. yangii",3.78148185788269,0,0,"TRINITY_DN45578_c2_g5_i4","C87A3_ORYSJ^C87A3_ORYSJ^Q:181-1551,H:57-510^41.13%ID^E:1e-120^RecName: Full=Cytochrome P450 87A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45578_c2_g5_i4.p1","130-1569[+]","C87A3_ORYSJ^C87A3_ORYSJ^Q:18-474,H:57-510^41.65%ID^E:5e-125^RecName: Full=Cytochrome P450 87A3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00067.19^p450^Cytochrome P450^33-459^E:4.1e-44",".",".","COG2124^Cytochrome p450","KEGG:osa:4336709","GO:0030659^cellular_component^cytoplasmic vesicle membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0010268^biological_process^brassinosteroid homeostasis`GO:0007275^biological_process^multicellular organism development`GO:0016125^biological_process^sterol metabolic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45356_c3_g5","leaves S. yangii","roots S. yangii",3.77774724884665,"0.000220207855855868","0.000327855739829074","TRINITY_DN45356_c3_g5_i1","R1B13_SOLDE^R1B13_SOLDE^Q:322-5,H:569-674^46.23%ID^E:3e-17^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45356_c3_g5_i1.p1","2-322[-]","R1B13_SOLDE^R1B13_SOLDE^Q:1-106,H:569-674^46.23%ID^E:2e-22^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-107^E:5.3e-21",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45165_c1_g4","leaves S. yangii","roots S. yangii",3.76451435336701,0,0,"TRINITY_DN45165_c1_g4_i5","SWC4_ARATH^SWC4_ARATH^Q:2362-1847,H:194-370^60.67%ID^E:1e-57^RecName: Full=SWR1-complex protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SWC4_ARATH^SWC4_ARATH^Q:1355-1158,H:361-417^45.45%ID^E:3e-08^RecName: Full=SWR1-complex protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SWC4_ARATH^SWC4_ARATH^Q:1056-976,H:417-440^66.67%ID^E:3e-08^RecName: Full=SWR1-complex protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45165_c1_g4_i5.p1","1811-2362[-]","SWC4_ARATH^SWC4_ARATH^Q:1-172,H:194-370^60.67%ID^E:1e-63^RecName: Full=SWR1-complex protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XSA4^DNA methyltransferase 1 associated protein 1","KEGG:ath:AT2G47210`KO:K11324","GO:0035267^cellular_component^NuA4 histone acetyltransferase complex`GO:0005634^cellular_component^nucleus`GO:0000812^cellular_component^Swr1 complex`GO:0003677^molecular_function^DNA binding`GO:0003714^molecular_function^transcription corepressor activity`GO:0006338^biological_process^chromatin remodeling`GO:0006281^biological_process^DNA repair`GO:0043968^biological_process^histone H2A acetylation`GO:0043967^biological_process^histone H4 acetylation`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46828_c0_g1","leaves S. yangii","roots S. yangii",3.75894629698133,0,0,"TRINITY_DN46828_c0_g1_i1","RK31_ARATH^RK31_ARATH^Q:1792-1427,H:1-132^64.71%ID^E:2e-48^RecName: Full=50S ribosomal protein L31, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46828_c0_g1_i1.p1","1394-1792[-]","RK31_ARATH^RK31_ARATH^Q:1-122,H:1-132^64.71%ID^E:2e-53^RecName: Full=50S ribosomal protein L31, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01197.15^Ribosomal_L31^Ribosomal protein L31^40-103^E:9.3e-17",".",".","COG0254^50S ribosomal protein L3-1","KEGG:ath:AT1G75350`KO:K02909","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45853_c3_g2","leaves S. yangii","roots S. yangii",3.75380790130985,{"v":704386968.21927,"d":"7.04E+08"},"0.000108190803319853","TRINITY_DN45853_c3_g2_i1","TIC55_PEA^TIC55_PEA^Q:562-95,H:398-553^69.23%ID^E:1e-70^RecName: Full=Protein TIC 55, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN45853_c3_g2_i1.p1","92-562[-]","TIC55_PEA^TIC55_PEA^Q:1-156,H:398-553^69.23%ID^E:3e-71^RecName: Full=Protein TIC 55, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".",".",".",".",".","GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0010277^molecular_function^chlorophyllide a oxygenase [overall] activity`GO:0046872^molecular_function^metal ion binding`GO:0015031^biological_process^protein transport",".",".","."]
["TRINITY_DN46221_c0_g1","leaves S. yangii","roots S. yangii",3.7452957409069,0,0,"TRINITY_DN46221_c0_g1_i1","DAO_ORYSJ^DAO_ORYSJ^Q:707-1261,H:114-298^58.38%ID^E:3e-69^RecName: Full=2-oxoglutarate-dependent dioxygenase DAO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46221_c0_g1_i1.p1","752-1282[+]","DAO_ORYSJ^DAO_ORYSJ^Q:10-170,H:138-298^63.35%ID^E:2e-69^RecName: Full=2-oxoglutarate-dependent dioxygenase DAO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^25-121^E:4.4e-19",".",".","COG3491^2OGFe(II) oxygenase","KEGG:osa:4336150","GO:0051213^molecular_function^dioxygenase activity`GO:0046872^molecular_function^metal ion binding`GO:0009852^biological_process^auxin catabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46244_c1_g1","leaves S. yangii","roots S. yangii",3.7390855119701,0,0,"TRINITY_DN46244_c1_g1_i2","THF1_ARATH^THF1_ARATH^Q:1023-244,H:20-286^73.13%ID^E:9e-136^RecName: Full=Protein THYLAKOID FORMATION 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46244_c1_g1_i2.p1","229-1110[-]","THF1_SOLTU^THF1_SOLTU^Q:1-289,H:1-286^71.28%ID^E:4e-144^RecName: Full=Protein THYLAKOID FORMATION1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF11264.5^ThylakoidFormat^Thylakoid formation protein^69-274^E:7.4e-75",".",".","ENOG4111FQD^May be involved in photosynthetic membrane biogenesis (By similarity)","KEGG:sot:102577610","GO:0009707^cellular_component^chloroplast outer membrane`GO:0009570^cellular_component^chloroplast stroma`GO:0016021^cellular_component^integral component of membrane`GO:0010207^biological_process^photosystem II assembly","GO:0010207^biological_process^photosystem II assembly`GO:0015979^biological_process^photosynthesis",".","."]
["TRINITY_DN44409_c0_g2","leaves S. yangii","roots S. yangii",3.72828854471403,0,0,"TRINITY_DN44409_c0_g2_i9","Y1222_ARATH^Y1222_ARATH^Q:1112-285,H:17-289^70.29%ID^E:2e-118^RecName: Full=Uncharacterized protein At1g32220, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44409_c0_g2_i9.p1","261-1178[-]","Y1222_ARATH^Y1222_ARATH^Q:23-304,H:17-295^69.86%ID^E:1e-146^RecName: Full=Uncharacterized protein At1g32220, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^74-179^E:1.3e-06`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^75-183^E:7.1e-05`PF13460.3^NAD_binding_10^NAD(P)H-binding^78-205^E:4.7e-12",".",".","COG0702^epimerase dehydratase","KEGG:ath:AT1G32220","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid`GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0006979^biological_process^response to oxidative stress","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46595_c4_g1","leaves S. yangii","roots S. yangii",3.72245999665072,0,0,"TRINITY_DN46595_c4_g1_i25","CYSKP_ARATH^CYSKP_ARATH^Q:2209-1673,H:138-316^79.89%ID^E:2e-84^RecName: Full=Cysteine synthase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CYSKP_ARATH^CYSKP_ARATH^Q:2522-2349,H:95-137^63.79%ID^E:7e-12^RecName: Full=Cysteine synthase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CYSKP_ARATH^CYSKP_ARATH^Q:644-552,H:361-391^80.65%ID^E:1e-06^RecName: Full=Cysteine synthase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46595_c4_g1_i25.p1","1541-2122[-]","CYSKP_SPIOL^CYSKP_SPIOL^Q:1-151,H:159-309^76.82%ID^E:7e-73^RecName: Full=Cysteine synthase, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00291.22^PALP^Pyridoxal-phosphate dependent enzyme^1-147^E:1.8e-31",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0009509^cellular_component^chromoplast`GO:0004124^molecular_function^cysteine synthase activity`GO:0016740^molecular_function^transferase activity`GO:0006535^biological_process^cysteine biosynthetic process from serine",".",".","."]
["TRINITY_DN41871_c0_g1","leaves S. yangii","roots S. yangii",3.70236979382575,0,0,"TRINITY_DN41871_c0_g1_i1","SFH2_ARATH^SFH2_ARATH^Q:1328-711,H:94-303^32.72%ID^E:7e-22^RecName: Full=Phosphatidylinositol/phosphatidylcholine transfer protein SFH2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41871_c0_g1_i1.p1","444-1433[-]","SFH2_ARATH^SFH2_ARATH^Q:36-241,H:94-303^32.72%ID^E:1e-23^RecName: Full=Phosphatidylinositol/phosphatidylcholine transfer protein SFH2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03765.12^CRAL_TRIO_N^CRAL/TRIO, N-terminal domain^21-59^E:2e-05`PF00650.17^CRAL_TRIO^CRAL/TRIO domain^86-241^E:3.2e-19",".",".","ENOG410XRSQ^Transfer protein",".","GO:0000139^cellular_component^Golgi membrane`GO:0005886^cellular_component^plasma membrane`GO:0005215^molecular_function^transporter activity`GO:0006656^biological_process^phosphatidylcholine biosynthetic process`GO:0015031^biological_process^protein transport",".",".","."]
["TRINITY_DN47357_c0_g2","leaves S. yangii","roots S. yangii",3.6902603084867,0,0,"TRINITY_DN47357_c0_g2_i1","RK12_NICSY^RK12_NICSY^Q:893-405,H:1-165^74.25%ID^E:3e-53^RecName: Full=50S ribosomal protein L12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47357_c0_g2_i1.p1","339-893[-]","RK12_NICSY^RK12_NICSY^Q:1-183,H:1-185^75.4%ID^E:1e-68^RecName: Full=50S ribosomal protein L12, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF16320.2^Ribosomal_L12_N^Ribosomal protein L7/L12 dimerisation domain^59-106^E:9.6e-14`PF00542.16^Ribosomal_L12^Ribosomal protein L7/L12 C-terminal domain^117-183^E:8.4e-24",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45110_c1_g1","leaves S. yangii","roots S. yangii",3.68798443581681,0,0,"TRINITY_DN45110_c1_g1_i3","PTR18_ARATH^PTR18_ARATH^Q:1-636,H:377-588^66.51%ID^E:2e-97^RecName: Full=Protein NRT1/ PTR FAMILY 3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45110_c1_g1_i3.p1","1-651[+]","PTR18_ARATH^PTR18_ARATH^Q:1-212,H:377-588^66.51%ID^E:5e-100^RecName: Full=Protein NRT1/ PTR FAMILY 3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^1-147^E:1.3e-28",".",".","COG3104^transporter","KEGG:ath:AT1G68570","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0042128^biological_process^nitrate assimilation","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47445_c0_g1","leaves S. yangii","roots S. yangii",3.68039383253234,0,0,"TRINITY_DN47445_c0_g1_i2","WTR16_ARATH^WTR16_ARATH^Q:2466-2050,H:89-216^63.57%ID^E:1e-45^RecName: Full=WAT1-related protein At3g02690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WTR16_ARATH^WTR16_ARATH^Q:1612-1307,H:205-306^76.47%ID^E:2e-30^RecName: Full=WAT1-related protein At3g02690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WTR16_ARATH^WTR16_ARATH^Q:966-733,H:292-365^58.23%ID^E:4e-19^RecName: Full=WAT1-related protein At3g02690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WTR16_ARATH^WTR16_ARATH^Q:610-503,H:377-412^69.44%ID^E:3e-07^RecName: Full=WAT1-related protein At3g02690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47445_c0_g1_i2.p1","2044-2724[-]","WTR16_ARATH^WTR16_ARATH^Q:34-225,H:23-216^48.82%ID^E:7e-52^RecName: Full=WAT1-related protein At3g02690, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00892.17^EamA^EamA-like transporter family^136-225^E:1.7e-09",".",".","COG0697^membrane","KEGG:ath:AT3G02690","GO:0009507^cellular_component^chloroplast`GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN42208_c0_g1","leaves S. yangii","roots S. yangii",3.67870440260512,0,0,"TRINITY_DN42208_c0_g1_i2","RK21_SPIOL^RK21_SPIOL^Q:711-364,H:120-235^81.03%ID^E:4e-44^RecName: Full=50S ribosomal protein L21, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN42208_c0_g1_i2.p1","355-975[-]","RK21_ARATH^RK21_ARATH^Q:2-202,H:5-210^54.67%ID^E:1e-52^RecName: Full=50S ribosomal protein L21, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00829.18^Ribosomal_L21p^Ribosomal prokaryotic L21 protein^93-193^E:1.1e-32",".",".","ENOG4111TX4^ribosomal protein l21","KEGG:ath:AT1G35680`KO:K02888","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005634^cellular_component^nucleus`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009658^biological_process^chloroplast organization`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0009409^biological_process^response to cold`GO:0010027^biological_process^thylakoid membrane organization`GO:0006412^biological_process^translation","GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44171_c0_g1","leaves S. yangii","roots S. yangii",3.67209862103684,0,0,"TRINITY_DN44171_c0_g1_i11","RVE1_ARATH^RVE1_ARATH^Q:2066-1221,H:41-244^39.36%ID^E:1e-27^RecName: Full=Protein REVEILLE 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44171_c0_g1_i11.p1","690-1838[-]","RVE1_ARATH^RVE1_ARATH^Q:8-206,H:82-244^40.2%ID^E:1e-16^RecName: Full=Protein REVEILLE 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG41123FA^myb-like DNA-binding domain, SHAQKYF class family protein","KEGG:ath:AT5G17300","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009851^biological_process^auxin biosynthetic process`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0007623^biological_process^circadian rhythm`GO:0010600^biological_process^regulation of auxin biosynthetic process`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46970_c0_g3","leaves S. yangii","roots S. yangii",3.64515974460843,0,0,"TRINITY_DN46970_c0_g3_i9","ACCH1_ARATH^ACCH1_ARATH^Q:917-348,H:176-365^63.68%ID^E:5e-117^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ACCH1_ARATH^ACCH1_ARATH^Q:1429-941,H:12-174^55.21%ID^E:5e-117^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46970_c0_g3_i9.p2","339-911[-]","ACCH1_ARATH^ACCH1_ARATH^Q:1-188,H:178-365^64.36%ID^E:2e-84^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^41-134^E:1.8e-26",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT1G06620","GO:0046872^molecular_function^metal ion binding`GO:0016491^molecular_function^oxidoreductase activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44422_c2_g10","leaves S. yangii","roots S. yangii",3.64438428329505,0,0,"TRINITY_DN44422_c2_g10_i2","E13H_TOBAC^E13H_TOBAC^Q:1281-319,H:20-339^61.8%ID^E:2e-134^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44422_c2_g10_i2.p1","316-1347[-]","E13H_TOBAC^E13H_TOBAC^Q:23-343,H:20-339^61.8%ID^E:5e-137^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^30-342^E:1.7e-118","sigP:1^27^0.834^YES",".",".",".","GO:0048046^cellular_component^apoplast`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45584_c0_g1","leaves S. yangii","roots S. yangii",3.6372071794066,0,0,"TRINITY_DN45584_c0_g1_i1","PPD4_ARATH^PPD4_ARATH^Q:454-837,H:66-163^50%ID^E:5e-22^RecName: Full=PsbP domain-containing protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPD4_ARATH^PPD4_ARATH^Q:527-655,H:89-129^74.42%ID^E:1e-12^RecName: Full=PsbP domain-containing protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45584_c0_g1_i1.p1","244-567[+]","PPD4_ARATH^PPD4_ARATH^Q:49-96,H:45-91^64.58%ID^E:1e-12^RecName: Full=PsbP domain-containing protein 4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111I2H^Thylakoid lumenal 29.8 kDa protein","KEGG:ath:AT1G77090","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009543^cellular_component^chloroplast thylakoid lumen`GO:0019898^cellular_component^extrinsic component of membrane`GO:0009654^cellular_component^photosystem II oxygen evolving complex`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0005509^molecular_function^calcium ion binding`GO:0015979^biological_process^photosynthesis",".",".","."]
["TRINITY_DN47155_c6_g3","leaves S. yangii","roots S. yangii",3.63498833178079,0,0,"TRINITY_DN47155_c6_g3_i1","Y005_SYNY3^Y005_SYNY3^Q:1232-2338,H:235-576^39.63%ID^E:2e-118^RecName: Full=Uncharacterized protein sll0005;^Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis`Y005_SYNY3^Y005_SYNY3^Q:612-1139,H:53-227^49.43%ID^E:2e-118^RecName: Full=Uncharacterized protein sll0005;^Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis",".","TRINITY_DN47155_c6_g3_i1.p1","4165-5943[-]","PPR38_ARATH^PPR38_ARATH^Q:32-582,H:57-601^35.57%ID^E:1e-119^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:401-585,H:70-254^26.49%ID^E:1e-14^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^54-112^E:0.0001`PF13041.3^PPR_2^PPR repeat family^65-113^E:3.1e-09`PF01535.17^PPR^PPR repeat^139-164^E:0.2`PF13041.3^PPR_2^PPR repeat family^172-220^E:1.5e-11`PF01535.17^PPR^PPR repeat^176-201^E:0.076`PF13812.3^PPR_3^Pentatricopeptide repeat domain^195-251^E:7.9e-09`PF12854.4^PPR_1^PPR repeat^204-234^E:1.4e-10`PF13041.3^PPR_2^PPR repeat family^206-255^E:3.1e-16`PF01535.17^PPR^PPR repeat^210-239^E:1.8e-07`PF12854.4^PPR_1^PPR repeat^237-261^E:9e-08`PF01535.17^PPR^PPR repeat^244-266^E:0.0012`PF13812.3^PPR_3^Pentatricopeptide repeat domain^266-322^E:3.5e-08`PF12854.4^PPR_1^PPR repeat^275-305^E:3.5e-10`PF13041.3^PPR_2^PPR repeat family^278-326^E:3.9e-14`PF01535.17^PPR^PPR repeat^280-307^E:2.3e-07`PF13041.3^PPR_2^PPR repeat family^312-358^E:1.5e-11`PF12854.4^PPR_1^PPR repeat^312-338^E:4.8e-09`PF01535.17^PPR^PPR repeat^315-345^E:7.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^338-392^E:0.0076`PF12854.4^PPR_1^PPR repeat^343-374^E:3.6e-09`PF13041.3^PPR_2^PPR repeat family^348-380^E:1.2e-07`PF01535.17^PPR^PPR repeat^351-379^E:2.5e-08`PF13041.3^PPR_2^PPR repeat family^384-430^E:1e-12`PF01535.17^PPR^PPR repeat^385-413^E:5.4e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^405-462^E:3.3e-07`PF13041.3^PPR_2^PPR repeat family^417-466^E:5.3e-14`PF01535.17^PPR^PPR repeat^421-450^E:0.016`PF13812.3^PPR_3^Pentatricopeptide repeat domain^441-497^E:5e-09`PF12854.4^PPR_1^PPR repeat^448-478^E:4e-10`PF13041.3^PPR_2^PPR repeat family^453-499^E:3.1e-13`PF01535.17^PPR^PPR repeat^455-485^E:4.6e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^479-531^E:1.2e-08`PF13041.3^PPR_2^PPR repeat family^487-535^E:3.3e-11`PF01535.17^PPR^PPR repeat^491-520^E:0.00017`PF13812.3^PPR_3^Pentatricopeptide repeat domain^511-554^E:0.004`PF13041.3^PPR_2^PPR repeat family^522-567^E:4.5e-08`PF01535.17^PPR^PPR repeat^525-555^E:0.037",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12700","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN47315_c2_g1","leaves S. yangii","roots S. yangii",3.63008150858046,0,0,"TRINITY_DN47315_c2_g1_i2","APR1_ARATH^APR1_ARATH^Q:152-1465,H:25-465^75.06%ID^E:0^RecName: Full=5'-adenylylsulfate reductase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47315_c2_g1_i2.p1","86-1468[+]","APR1_ARATH^APR1_ARATH^Q:23-460,H:25-465^75.06%ID^E:0^RecName: Full=5'-adenylylsulfate reductase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01507.16^PAPS_reduct^Phosphoadenosine phosphosulfate reductase family^117-297^E:3.3e-43`PF00085.17^Thioredoxin^Thioredoxin^364-456^E:5.6e-11",".",".","COG0175^Reduction of activated sulfate into sulfite (By similarity)","KEGG:ath:AT4G04610`KO:K05907","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0033741^molecular_function^adenylyl-sulfate reductase (glutathione) activity`GO:0009973^molecular_function^adenylyl-sulfate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0045454^biological_process^cell redox homeostasis`GO:0019344^biological_process^cysteine biosynthetic process`GO:0000103^biological_process^sulfate assimilation`GO:0019419^biological_process^sulfate reduction","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN45971_c2_g6","leaves S. yangii","roots S. yangii",3.60076366768211,0,0,"TRINITY_DN45971_c2_g6_i2","GATC_VITVI^GATC_VITVI^Q:78-479,H:1-137^66.42%ID^E:2e-57^RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03149};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN45971_c2_g6_i2.p1","78-482[+]","GATC_VITVI^GATC_VITVI^Q:1-134,H:1-137^66.42%ID^E:2e-59^RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03149};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF02686.12^Glu-tRNAGln^Glu-tRNAGln amidotransferase C subunit^56-127^E:1.2e-11",".",".","ENOG410YK7T^Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (By similarity)","KEGG:vvi:100249085`KO:K02435","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0016874^molecular_function^ligase activity`GO:0006450^biological_process^regulation of translational fidelity`GO:0006412^biological_process^translation","GO:0006450^biological_process^regulation of translational fidelity",".","."]
["TRINITY_DN47105_c0_g10","leaves S. yangii","roots S. yangii",3.59204870150761,0,0,"TRINITY_DN47105_c0_g10_i1","RK6_ARATH^RK6_ARATH^Q:876-226,H:1-214^73.73%ID^E:4e-111^RecName: Full=50S ribosomal protein L6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47105_c0_g10_i1.p1","196-876[-]","RK6_ARATH^RK6_ARATH^Q:1-226,H:1-223^74.78%ID^E:2e-119^RecName: Full=50S ribosomal protein L6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00347.20^Ribosomal_L6^Ribosomal protein L6^56-128^E:4.9e-11`PF00347.20^Ribosomal_L6^Ribosomal protein L6^136-210^E:1.6e-20",".",".","COG0097^This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity)","KEGG:ath:AT1G05190`KO:K02933","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005840^cellular_component^ribosome`GO:0003723^molecular_function^RNA binding`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009735^biological_process^response to cytokinin`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0019843^molecular_function^rRNA binding`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44916_c2_g5","leaves S. yangii","roots S. yangii",3.58643443330193,0,0,"TRINITY_DN44916_c2_g5_i1","TBL38_ARATH^TBL38_ARATH^Q:588-1,H:39-235^58.88%ID^E:6e-88^RecName: Full=Protein trichome birefringence-like 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44916_c2_g5_i1.p1","1-813[-]","TBL38_ARATH^TBL38_ARATH^Q:61-271,H:24-235^56.6%ID^E:4e-90^RecName: Full=Protein trichome birefringence-like 38;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14416.3^PMR5N^PMR5 N terminal Domain^97-149^E:2.1e-22`PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^150-271^E:1.7e-40",".",".","ENOG410YAJT^function domain containing protein, expressed","KEGG:ath:AT1G29050","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:0071554^biological_process^cell wall organization or biogenesis",".",".","."]
["TRINITY_DN44779_c3_g1","leaves S. yangii","roots S. yangii",3.56797858896681,0,0,"TRINITY_DN44779_c3_g1_i5","LHT1_ARATH^LHT1_ARATH^Q:5982-5122,H:1-287^83.97%ID^E:5e-152^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LHT1_ARATH^LHT1_ARATH^Q:3273-2872,H:194-327^76.87%ID^E:2e-112^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LHT1_ARATH^LHT1_ARATH^Q:3707-3498,H:67-136^91.43%ID^E:2e-112^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LHT1_ARATH^LHT1_ARATH^Q:3496-3395,H:161-194^91.18%ID^E:2e-112^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LHT1_ARATH^LHT1_ARATH^Q:2783-2667,H:323-361^66.67%ID^E:2e-112^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LHT1_ARATH^LHT1_ARATH^Q:4121-3963,H:13-65^75.47%ID^E:5e-17^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44779_c3_g1_i5.p1","5014-5982[-]","LHT1_ARATH^LHT1_ARATH^Q:1-287,H:1-287^83.97%ID^E:7e-179^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01490.15^Aa_trans^Transmembrane amino acid transporter protein^35-288^E:9.8e-69`PF03222.10^Trp_Tyr_perm^Tryptophan/tyrosine permease family^39-168^E:1.4e-08",".",".","COG0814^amino acid transport","KEGG:ath:AT5G40780","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015171^molecular_function^amino acid transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0043090^biological_process^amino acid import`GO:0003333^biological_process^amino acid transmembrane transport`GO:0080167^biological_process^response to karrikin","GO:0003333^biological_process^amino acid transmembrane transport",".","."]
["TRINITY_DN43046_c0_g1","leaves S. yangii","roots S. yangii",3.56360720801216,0,0,"TRINITY_DN43046_c0_g1_i3","SIRB_ARATH^SIRB_ARATH^Q:232-687,H:72-223^72.37%ID^E:7e-75^RecName: Full=Sirohydrochlorin ferrochelatase, chloroplastic {ECO:0000303|PubMed:15545265};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43046_c0_g1_i3.p1","67-690[+]","SIRB_ARATH^SIRB_ARATH^Q:56-207,H:72-223^72.37%ID^E:1e-79^RecName: Full=Sirohydrochlorin ferrochelatase, chloroplastic {ECO:0000303|PubMed:15545265};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01903.14^CbiX^CbiX^73-177^E:2.7e-29",".",".","COG2138^cobalamin (vitamin b12) biosynthesis cbix protein","KEGG:ath:AT1G50170","GO:0009507^cellular_component^chloroplast`GO:0016852^molecular_function^sirohydrochlorin cobaltochelatase activity`GO:0051266^molecular_function^sirohydrochlorin ferrochelatase activity`GO:0009236^biological_process^cobalamin biosynthetic process`GO:0006979^biological_process^response to oxidative stress`GO:0019354^biological_process^siroheme biosynthetic process","GO:0016852^molecular_function^sirohydrochlorin cobaltochelatase activity`GO:0009236^biological_process^cobalamin biosynthetic process",".","."]
["TRINITY_DN46076_c2_g1","leaves S. yangii","roots S. yangii",3.56040348145628,0,0,"TRINITY_DN46076_c2_g1_i2","UFOG3_FRAAN^UFOG3_FRAAN^Q:1184-3,H:3-407^49.39%ID^E:4e-121^RecName: Full=Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".","TRINITY_DN46076_c2_g1_i2.p1","3-1187[-]","UFOG3_FRAAN^UFOG3_FRAAN^Q:2-395,H:3-407^49.88%ID^E:8e-131^RecName: Full=Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^264-391^E:8.1e-17",".",".",".",".","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN39663_c0_g1","leaves S. yangii","roots S. yangii",3.56005052313384,0,0,"TRINITY_DN39663_c0_g1_i2","GRS16_ARATH^GRS16_ARATH^Q:133-1014,H:1-292^65.76%ID^E:3e-133^RecName: Full=Bifunctional monothiol glutaredoxin-S16, chloroplastic {ECO:0000303|PubMed:15170506};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39663_c0_g1_i2.p1","133-1020[+]","GRS16_ARATH^GRS16_ARATH^Q:1-294,H:1-292^65.76%ID^E:4e-135^RecName: Full=Bifunctional monothiol glutaredoxin-S16, chloroplastic {ECO:0000303|PubMed:15170506};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00462.21^Glutaredoxin^Glutaredoxin^208-275^E:6.8e-18",".",".","COG0278^Glutaredoxin","KEGG:ath:AT2G38270","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0009055^molecular_function^electron carrier activity`GO:0016787^molecular_function^hydrolase activity`GO:0046872^molecular_function^metal ion binding`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0006812^biological_process^cation transport`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN45856_c2_g1","leaves S. yangii","roots S. yangii",3.55484918489419,0,0,"TRINITY_DN45856_c2_g1_i11","AMY3_ARATH^AMY3_ARATH^Q:3747-1735,H:1-654^57.33%ID^E:0^RecName: Full=Alpha-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AMY3_ARATH^AMY3_ARATH^Q:1276-569,H:650-887^80.67%ID^E:3e-130^RecName: Full=Alpha-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45856_c2_g1_i11.p1","1645-3747[-]","AMY3_ARATH^AMY3_ARATH^Q:1-671,H:1-654^57.33%ID^E:0^RecName: Full=Alpha-amylase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00128.21^Alpha-amylase^Alpha amylase, catalytic domain^533-608^E:2.2e-16",".",".","COG0366^alpha amylase, catalytic","KEGG:ath:AT1G69830","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0004556^molecular_function^alpha-amylase activity`GO:0005509^molecular_function^calcium ion binding`GO:0005983^biological_process^starch catabolic process","GO:0003824^molecular_function^catalytic activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN41903_c0_g1","leaves S. yangii","roots S. yangii",3.5486046249453,0,0,"TRINITY_DN41903_c0_g1_i1","GLYR1_ARATH^GLYR1_ARATH^Q:223-1083,H:2-288^81.88%ID^E:3e-148^RecName: Full=Glyoxylate/succinic semialdehyde reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41903_c0_g1_i1.p1","217-1095[+]","GLYR1_ARATH^GLYR1_ARATH^Q:3-289,H:2-288^81.88%ID^E:7e-171^RecName: Full=Glyoxylate/succinic semialdehyde reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03446.12^NAD_binding_2^NAD binding domain of 6-phosphogluconate dehydrogenase^3-162^E:1.1e-40`PF14833.3^NAD_binding_11^NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase^165-283^E:1.3e-26",".",".","COG2084^Dehydrogenase","KEGG:ath:AT3G25530`KO:K18121","GO:0005829^cellular_component^cytosol`GO:0003858^molecular_function^3-hydroxybutyrate dehydrogenase activity`GO:0030267^molecular_function^glyoxylate reductase (NADP) activity`GO:0051287^molecular_function^NAD binding`GO:0004616^molecular_function^phosphogluconate dehydrogenase (decarboxylating) activity`GO:0006979^biological_process^response to oxidative stress","GO:0004616^molecular_function^phosphogluconate dehydrogenase (decarboxylating) activity`GO:0055114^biological_process^oxidation-reduction process`GO:0051287^molecular_function^NAD binding",".","."]
["TRINITY_DN45138_c0_g1","leaves S. yangii","roots S. yangii",3.54413392732848,0,0,"TRINITY_DN45138_c0_g1_i15","BBD2_ARATH^BBD2_ARATH^Q:856-1464,H:11-215^67.32%ID^E:6e-76^RecName: Full=Bifunctional nuclease 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BBD2_ARATH^BBD2_ARATH^Q:2322-2558,H:233-310^62.03%ID^E:1e-16^RecName: Full=Bifunctional nuclease 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45138_c0_g1_i15.p1","838-1524[+]","BBD2_ARATH^BBD2_ARATH^Q:1-209,H:1-215^65.58%ID^E:1e-90^RecName: Full=Bifunctional nuclease 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02577.11^DNase-RNase^Bifunctional nuclease^130-208^E:7e-11",".",".","ENOG4110AP6^Bifunctional nuclease with both RNase and DNase activites. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen","KEGG:ath:AT1G19660","GO:0005634^cellular_component^nucleus`GO:0004518^molecular_function^nuclease activity","GO:0004518^molecular_function^nuclease activity",".","."]
["TRINITY_DN36844_c0_g1","leaves S. yangii","roots S. yangii",3.54316815051482,0,0,"TRINITY_DN36844_c0_g1_i1","RR5_SPIOL^RR5_SPIOL^Q:1078-335,H:61-308^79.44%ID^E:1e-84^RecName: Full=30S ribosomal protein S5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN36844_c0_g1_i1.p1","332-1249[-]","RR5_SPIOL^RR5_SPIOL^Q:58-305,H:61-308^79.44%ID^E:8e-143^RecName: Full=30S ribosomal protein S5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00333.17^Ribosomal_S5^Ribosomal protein S5, N-terminal domain^149-213^E:1.5e-22`PF03719.12^Ribosomal_S5_C^Ribosomal protein S5, C-terminal domain^227-296^E:6.3e-25",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0015935^cellular_component^small ribosomal subunit`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0046677^biological_process^response to antibiotic`GO:0006412^biological_process^translation","GO:0003723^molecular_function^RNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN43976_c4_g4","leaves S. yangii","roots S. yangii",3.54058496594336,0,0,"TRINITY_DN43976_c4_g4_i2","BZP53_ARATH^BZP53_ARATH^Q:808-1221,H:1-146^52.05%ID^E:9e-42^RecName: Full=bZIP transcription factor 53 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43976_c4_g4_i2.p1","808-1224[+]","BZP53_ARATH^BZP53_ARATH^Q:1-138,H:1-146^52.05%ID^E:6e-47^RecName: Full=bZIP transcription factor 53 {ECO:0000303|PubMed:11906833};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07716.12^bZIP_2^Basic region leucine zipper^15-65^E:3.1e-07`PF00170.18^bZIP_1^bZIP transcription factor^17-64^E:8e-08",".",".","ENOG410YP2C^Ocs element-binding factor","KEGG:ath:AT3G62420","GO:0005634^cellular_component^nucleus`GO:0045735^molecular_function^nutrient reservoir activity`GO:0046982^molecular_function^protein heterodimerization activity`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009267^biological_process^cellular response to starvation`GO:0006971^biological_process^hypotonic response`GO:2000693^biological_process^positive regulation of seed maturation`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45236_c0_g1","leaves S. yangii","roots S. yangii",3.52318534212158,0,0,"TRINITY_DN45236_c0_g1_i1","CP33_ARATH^CP33_ARATH^Q:455-952,H:117-292^33.15%ID^E:1e-19^RecName: Full=RNA-binding protein CP33, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45236_c0_g1_i1.p1","251-1057[+]","ROC3_NICSY^ROC3_NICSY^Q:69-234,H:98-264^35.5%ID^E:5e-24^RecName: Full=28 kDa ribonucleoprotein, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^70-139^E:5.6e-15`PF13893.3^RRM_5^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^79-144^E:0.024`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^162-233^E:7.3e-15",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0000166^molecular_function^nucleotide binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN44759_c2_g1","leaves S. yangii","roots S. yangii",3.49292518933403,0,0,"TRINITY_DN44759_c2_g1_i7","VIPP1_ARATH^VIPP1_ARATH^Q:319-885,H:35-218^73.54%ID^E:4e-115^RecName: Full=Membrane-associated protein VIPP1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`VIPP1_ARATH^VIPP1_ARATH^Q:969-1298,H:218-330^72.57%ID^E:4e-115^RecName: Full=Membrane-associated protein VIPP1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44759_c2_g1_i7.p1","229-945[+]","VIPP1_ARATH^VIPP1_ARATH^Q:31-219,H:35-218^73.54%ID^E:3e-91^RecName: Full=Membrane-associated protein VIPP1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04012.9^PspA_IM30^PspA/IM30 family^74-220^E:2.2e-43",".",".","COG1842^Phage shock protein A","KEGG:ath:AT1G65260`KO:K03969","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0009295^cellular_component^nucleoid`GO:0009508^cellular_component^plastid chromosome`GO:0010027^biological_process^thylakoid membrane organization`GO:0016050^biological_process^vesicle organization",".",".","."]
["TRINITY_DN46954_c0_g1","leaves S. yangii","roots S. yangii",3.48721492281958,0,0,"TRINITY_DN46954_c0_g1_i4","RK18_ARATH^RK18_ARATH^Q:603-274,H:61-170^87.27%ID^E:8e-64^RecName: Full=50S ribosomal protein L18, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46954_c0_g1_i4.p1","271-774[-]","RK18_ARATH^RK18_ARATH^Q:41-167,H:44-170^83.46%ID^E:7e-73^RecName: Full=50S ribosomal protein L18, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00861.19^Ribosomal_L18p^Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast^49-167^E:1.9e-47",".",".","COG0256^This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity)","KEGG:ath:AT1G48350`KO:K02881","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0008097^molecular_function^5S rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46583_c1_g1","leaves S. yangii","roots S. yangii",3.47089123133568,0,0,"TRINITY_DN46583_c1_g1_i1","HEM3_ARATH^HEM3_ARATH^Q:896-408,H:218-380^82.82%ID^E:1e-90^RecName: Full=Porphobilinogen deaminase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46583_c1_g1_i1.p1","399-791[-]","HEM3_ARATH^HEM3_ARATH^Q:1-128,H:253-380^82.81%ID^E:2e-75^RecName: Full=Porphobilinogen deaminase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01379.17^Porphobil_deam^Porphobilinogen deaminase, dipyromethane cofactor binding domain^5-34^E:3.4e-05`PF03900.12^Porphobil_deamC^Porphobilinogen deaminase, C-terminal domain^48-120^E:5.1e-15",".",".","COG0181^Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (By similarity)","KEGG:ath:AT5G08280`KO:K01749","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0004418^molecular_function^hydroxymethylbilane synthase activity`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0042742^biological_process^defense response to bacterium`GO:0018160^biological_process^peptidyl-pyrromethane cofactor linkage`GO:0006782^biological_process^protoporphyrinogen IX biosynthetic process","GO:0004418^molecular_function^hydroxymethylbilane synthase activity`GO:0033014^biological_process^tetrapyrrole biosynthetic process",".","."]
["TRINITY_DN46293_c4_g1","leaves S. yangii","roots S. yangii",3.4707604664715,0,0,"TRINITY_DN46293_c4_g1_i4","BASS3_ARATH^BASS3_ARATH^Q:1189-419,H:167-423^80.16%ID^E:1e-127^RecName: Full=Probable sodium/metabolite cotransporter BASS3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BASS3_ARATH^BASS3_ARATH^Q:1623-1270,H:53-167^62.71%ID^E:1e-127^RecName: Full=Probable sodium/metabolite cotransporter BASS3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46293_c4_g1_i4.p1","395-1201[-]","BASS3_ARATH^BASS3_ARATH^Q:5-261,H:167-423^80.16%ID^E:1e-138^RecName: Full=Probable sodium/metabolite cotransporter BASS3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01758.13^SBF^Sodium Bile acid symporter family^5-159^E:2.2e-25",".",".","COG0385^bile acid","KEGG:ath:AT3G25410","GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN42457_c0_g1","leaves S. yangii","roots S. yangii",3.46337939503332,0,0,"TRINITY_DN42457_c0_g1_i10","GCP2_ARATH^GCP2_ARATH^Q:2961-1735,H:67-477^56.52%ID^E:2e-136^RecName: Full=Probable glutamate carboxypeptidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GCP2_ARATH^GCP2_ARATH^Q:872-354,H:565-687^34.29%ID^E:1e-19^RecName: Full=Probable glutamate carboxypeptidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GCP2_ARATH^GCP2_ARATH^Q:1472-1143,H:480-565^42.37%ID^E:5e-16^RecName: Full=Probable glutamate carboxypeptidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42457_c0_g1_i10.p1","1702-3096[-]","GCP2_ARATH^GCP2_ARATH^Q:1-454,H:17-477^55.89%ID^E:3e-168^RecName: Full=Probable glutamate carboxypeptidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04389.14^Peptidase_M28^Peptidase family M28^313-437^E:4.3e-17","sigP:1^27^0.704^YES",".","COG2234^peptidase m28","KEGG:ath:AT3G54720`KO:K01301","GO:0016021^cellular_component^integral component of membrane`GO:0004180^molecular_function^carboxypeptidase activity`GO:0046872^molecular_function^metal ion binding`GO:0004181^molecular_function^metallocarboxypeptidase activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0009908^biological_process^flower development`GO:0010305^biological_process^leaf vascular tissue pattern formation`GO:0048507^biological_process^meristem development`GO:0009640^biological_process^photomorphogenesis`GO:0006508^biological_process^proteolysis`GO:0010080^biological_process^regulation of floral meristem growth`GO:0010081^biological_process^regulation of inflorescence meristem growth`GO:0010082^biological_process^regulation of root meristem growth`GO:0048364^biological_process^root development",".",".","."]
["TRINITY_DN42760_c0_g1","leaves S. yangii","roots S. yangii",3.45905615388624,0,0,"TRINITY_DN42760_c0_g1_i2","GTOMC_ORYSJ^GTOMC_ORYSJ^Q:521-1378,H:74-359^74.83%ID^E:7e-153^RecName: Full=Probable tocopherol O-methyltransferase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN42760_c0_g1_i2.p1","278-1381[+]","GTOMC_ORYSJ^GTOMC_ORYSJ^Q:82-367,H:74-359^74.83%ID^E:2e-162^RecName: Full=Probable tocopherol O-methyltransferase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02353.17^CMAS^Mycolic acid cyclopropane synthetase^122-255^E:1.1e-13`PF13489.3^Methyltransf_23^Methyltransferase domain^133-259^E:8.8e-15`PF01209.15^Ubie_methyltran^ubiE/COQ5 methyltransferase family^142-255^E:4.8e-08`PF13847.3^Methyltransf_31^Methyltransferase domain^144-256^E:1.2e-15`PF13649.3^Methyltransf_25^Methyltransferase domain^149-244^E:2.2e-19`PF08241.9^Methyltransf_11^Methyltransferase domain^150-248^E:2.8e-21`PF08242.9^Methyltransf_12^Methyltransferase domain^150-246^E:3.7e-10",".",".","ENOG410XP5G^Methyltransferase","KEGG:osa:4330437`KO:K05928","GO:0009507^cellular_component^chloroplast`GO:0051741^molecular_function^2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity`GO:0008757^molecular_function^S-adenosylmethionine-dependent methyltransferase activity`GO:0050342^molecular_function^tocopherol O-methyltransferase activity`GO:0032259^biological_process^methylation`GO:0010189^biological_process^vitamin E biosynthetic process","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44963_c8_g1","leaves S. yangii","roots S. yangii",3.44819742406416,0,0,"TRINITY_DN44963_c8_g1_i11","CF107_ARATH^CF107_ARATH^Q:45-566,H:446-634^65.13%ID^E:3e-74^RecName: Full=Protein high chlorophyll fluorescent 107 {ECO:0000312|EMBL:AEE75897.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CF107_ARATH^CF107_ARATH^Q:39-347,H:205-307^36.19%ID^E:1e-07^RecName: Full=Protein high chlorophyll fluorescent 107 {ECO:0000312|EMBL:AEE75897.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CF107_ARATH^CF107_ARATH^Q:48-284,H:277-352^36.71%ID^E:8e-06^RecName: Full=Protein high chlorophyll fluorescent 107 {ECO:0000312|EMBL:AEE75897.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44963_c8_g1_i11.p1","57-662[+]","CF107_ARATH^CF107_ARATH^Q:1-174,H:450-638^63.59%ID^E:3e-73^RecName: Full=Protein high chlorophyll fluorescent 107 {ECO:0000312|EMBL:AEE75897.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CF107_ARATH^CF107_ARATH^Q:4-97,H:214-307^36.46%ID^E:3e-08^RecName: Full=Protein high chlorophyll fluorescent 107 {ECO:0000312|EMBL:AEE75897.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CF107_ARATH^CF107_ARATH^Q:1-76,H:280-352^36.84%ID^E:6e-06^RecName: Full=Protein high chlorophyll fluorescent 107 {ECO:0000312|EMBL:AEE75897.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13181.3^TPR_8^Tetratricopeptide repeat^3-23^E:0.06",".",".","COG0457^repeat-containing protein",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0031969^cellular_component^chloroplast membrane`GO:0009570^cellular_component^chloroplast stroma`GO:0005774^cellular_component^vacuolar membrane`GO:0043621^molecular_function^protein self-association`GO:0003727^molecular_function^single-stranded RNA binding`GO:0006397^biological_process^mRNA processing`GO:1901918^biological_process^negative regulation of exoribonuclease activity`GO:0009657^biological_process^plastid organization`GO:0006417^biological_process^regulation of translation`GO:0010114^biological_process^response to red light`GO:0006396^biological_process^RNA processing","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN28806_c0_g2","leaves S. yangii","roots S. yangii",3.43852490322288,0,0,"TRINITY_DN28806_c0_g2_i2","RNC1_ARATH^RNC1_ARATH^Q:1810-338,H:47-537^83.3%ID^E:0^RecName: Full=Ribonuclease III domain-containing protein RNC1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28806_c0_g2_i2.p1","335-2017[-]","RNC1_ARATH^RNC1_ARATH^Q:70-560,H:47-537^83.3%ID^E:0^RecName: Full=Ribonuclease III domain-containing protein RNC1, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4110321^Ribonuclease III","KEGG:ath:AT4G37510","GO:0004525^molecular_function^ribonuclease III activity`GO:0003723^molecular_function^RNA binding`GO:0006396^biological_process^RNA processing",".",".","."]
["TRINITY_DN47584_c1_g2","leaves S. yangii","roots S. yangii",3.4373904358271,0,0,"TRINITY_DN47584_c1_g2_i6","CLPP5_ARATH^CLPP5_ARATH^Q:1452-670,H:33-297^85.71%ID^E:2e-157^RecName: Full=ATP-dependent Clp protease proteolytic subunit 5, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47584_c1_g2_i6.p1","658-1551[-]","CLPP5_ARATH^CLPP5_ARATH^Q:1-294,H:1-297^82.72%ID^E:1e-177^RecName: Full=ATP-dependent Clp protease proteolytic subunit 5, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00574.20^CLP_protease^Clp protease^106-282^E:4.6e-80",".",".","COG0740^Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)","KEGG:ath:AT1G02560`KO:K01358","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009840^cellular_component^chloroplastic endopeptidase Clp complex`GO:0009532^cellular_component^plastid stroma`GO:0009579^cellular_component^thylakoid`GO:0004252^molecular_function^serine-type endopeptidase activity",".",".","."]
["TRINITY_DN47157_c4_g2","leaves S. yangii","roots S. yangii",3.42180239227303,0,0,"TRINITY_DN47157_c4_g2_i9","CSLG2_ARATH^CSLG2_ARATH^Q:2944-1844,H:24-384^37.99%ID^E:3e-71^RecName: Full=Cellulose synthase-like protein G2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CSLG2_ARATH^CSLG2_ARATH^Q:1256-288,H:373-697^34.24%ID^E:1e-47^RecName: Full=Cellulose synthase-like protein G2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47157_c4_g2_i9.p1","1787-3004[-]","CSLE1_ARATH^CSLE1_ARATH^Q:6-380,H:18-394^39.95%ID^E:8e-78^RecName: Full=Cellulose synthase-like protein E1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03552.11^Cellulose_synt^Cellulose synthase^99-378^E:3.3e-74",".",".","ENOG410Y931^cellulose synthase-like protein","KEGG:ath:AT1G55850","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0071555^biological_process^cell wall organization`GO:0030244^biological_process^cellulose biosynthetic process","GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0030244^biological_process^cellulose biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45717_c3_g2","leaves S. yangii","roots S. yangii",3.40753976739528,0,0,"TRINITY_DN45717_c3_g2_i1","STEP1_ARATH^STEP1_ARATH^Q:353-655,H:46-146^68.32%ID^E:1e-25^RecName: Full=Stress enhanced protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45717_c3_g2_i1.p1","239-658[+]","STEP1_ARATH^STEP1_ARATH^Q:39-139,H:46-146^68.32%ID^E:4e-39^RecName: Full=Stress enhanced protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Y6IC^stress enhanced protein 1","KEGG:ath:AT4G34190","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009523^cellular_component^photosystem II`GO:0016168^molecular_function^chlorophyll binding`GO:0071486^biological_process^cellular response to high light intensity`GO:0071492^biological_process^cellular response to UV-A`GO:0015979^biological_process^photosynthesis`GO:0009644^biological_process^response to high light intensity`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN44035_c10_g1","leaves S. yangii","roots S. yangii",3.40639330284719,0,0,"TRINITY_DN44035_c10_g1_i1","SIGA_ARATH^SIGA_ARATH^Q:375-1754,H:1-502^61.26%ID^E:4e-167^RecName: Full=RNA polymerase sigma factor sigA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44035_c10_g1_i1.p1","369-1757[+]","SIGA_ARATH^SIGA_ARATH^Q:3-462,H:1-502^62.25%ID^E:0^RecName: Full=RNA polymerase sigma factor sigA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04542.11^Sigma70_r2^Sigma-70 region 2^225-291^E:3.8e-15`PF04539.13^Sigma70_r3^Sigma-70 region 3^302-374^E:7.7e-13`PF04545.13^Sigma70_r4^Sigma-70, region 4^398-448^E:1e-10",".",".","COG0568^Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)","KEGG:ath:AT1G64860`KO:K03086","GO:0009507^cellular_component^chloroplast`GO:0003677^molecular_function^DNA binding`GO:0001053^molecular_function^plastid sigma factor activity`GO:0016987^molecular_function^sigma factor activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071482^biological_process^cellular response to light stimulus`GO:0071461^biological_process^cellular response to redox state`GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0080005^biological_process^photosystem stoichiometry adjustment`GO:2001141^biological_process^regulation of RNA biosynthetic process`GO:0006355^biological_process^regulation of transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0016987^molecular_function^sigma factor activity`GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46102_c2_g1","leaves S. yangii","roots S. yangii",3.39364480981432,0,0,"TRINITY_DN46102_c2_g1_i2","LUT5_ARATH^LUT5_ARATH^Q:2306-1206,H:67-433^82.29%ID^E:0^RecName: Full=Protein LUTEIN DEFICIENT 5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LUT5_ARATH^LUT5_ARATH^Q:680-234,H:461-595^69.13%ID^E:2e-61^RecName: Full=Protein LUTEIN DEFICIENT 5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46102_c2_g1_i2.p1","1104-2525[-]","LUT5_ARATH^LUT5_ARATH^Q:53-440,H:46-433^81.7%ID^E:0^RecName: Full=Protein LUTEIN DEFICIENT 5, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^140-441^E:2.2e-50",".",".","COG2124^Cytochrome p450","KEGG:ath:AT1G31800`KO:K15747","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0031969^cellular_component^chloroplast membrane`GO:0010291^molecular_function^carotene beta-ring hydroxylase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0016123^biological_process^xanthophyll biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43581_c2_g2","leaves S. yangii","roots S. yangii",3.38292249240157,0,0,"TRINITY_DN43581_c2_g2_i1","PDX1_HEVBR^PDX1_HEVBR^Q:354-1283,H:1-309^93.23%ID^E:0^RecName: Full=Probable pyridoxal 5'-phosphate synthase subunit PDX1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea",".","TRINITY_DN43581_c2_g2_i1.p2","354-1286[+]","PDX1_HEVBR^PDX1_HEVBR^Q:1-310,H:1-309^93.23%ID^E:0^RecName: Full=Probable pyridoxal 5'-phosphate synthase subunit PDX1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea","PF01680.14^SOR_SNZ^SOR/SNZ family^24-229^E:1.2e-111`PF05690.11^ThiG^Thiazole biosynthesis protein ThiG^206-273^E:8.4e-08",".",".",".",".","GO:0036381^molecular_function^pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity`GO:0042823^biological_process^pyridoxal phosphate biosynthetic process`GO:0042819^biological_process^vitamin B6 biosynthetic process","GO:0042819^biological_process^vitamin B6 biosynthetic process`GO:0042823^biological_process^pyridoxal phosphate biosynthetic process",".","."]
["TRINITY_DN47625_c0_g2","leaves S. yangii","roots S. yangii",3.38279164059357,0,0,"TRINITY_DN47625_c0_g2_i1","MDAR4_ARATH^MDAR4_ARATH^Q:882-1604,H:238-488^67.33%ID^E:4e-104^RecName: Full=Monodehydroascorbate reductase 4, peroxisomal {ECO:0000303|PubMed:16146528};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`MDAR4_ARATH^MDAR4_ARATH^Q:325-438,H:198-235^76.32%ID^E:1e-10^RecName: Full=Monodehydroascorbate reductase 4, peroxisomal {ECO:0000303|PubMed:16146528};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47625_c0_g2_i1.p1","927-1607[+]","MDAR4_ARATH^MDAR4_ARATH^Q:1-226,H:253-488^66.53%ID^E:2e-100^RecName: Full=Monodehydroascorbate reductase 4, peroxisomal {ECO:0000303|PubMed:16146528};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^1-69^E:1.8e-11",".",".","COG0446^pyridine nucleotide-disulfide oxidoreductase","KEGG:ath:AT3G27820`KO:K08232","GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016656^molecular_function^monodehydroascorbate reductase (NADH) activity`GO:0042744^biological_process^hydrogen peroxide catabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47625_c0_g5","leaves S. yangii","roots S. yangii",3.36802195104019,0,0,"TRINITY_DN47625_c0_g5_i1","MDAR4_ARATH^MDAR4_ARATH^Q:362-3,H:1-120^82.5%ID^E:5e-52^RecName: Full=Monodehydroascorbate reductase 4, peroxisomal {ECO:0000303|PubMed:16146528};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47625_c0_g5_i1.p1","3-362[-]","MDAR4_ARATH^MDAR4_ARATH^Q:1-120,H:1-120^82.5%ID^E:2e-57^RecName: Full=Monodehydroascorbate reductase 4, peroxisomal {ECO:0000303|PubMed:16146528};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^7-120^E:7.4e-10",".",".","COG0446^pyridine nucleotide-disulfide oxidoreductase","KEGG:ath:AT3G27820`KO:K08232","GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016656^molecular_function^monodehydroascorbate reductase (NADH) activity`GO:0042744^biological_process^hydrogen peroxide catabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN21000_c0_g1","leaves S. yangii","roots S. yangii",3.36663607183875,0,0,"TRINITY_DN21000_c0_g1_i1","RK4_TOBAC^RK4_TOBAC^Q:280-894,H:47-251^82.44%ID^E:6e-117^RecName: Full=50S ribosomal protein L4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN21000_c0_g1_i1.p1","136-993[+]","RK4_TOBAC^RK4_TOBAC^Q:22-255,H:16-253^76.47%ID^E:2e-126^RecName: Full=50S ribosomal protein L4, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00573.19^Ribosomal_L4^Ribosomal protein L4/L1 family^74-253^E:7.9e-53",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005840^cellular_component^ribosome`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN43794_c2_g3","leaves S. yangii","roots S. yangii",3.34442846860802,0,0,"TRINITY_DN43794_c2_g3_i8","UPL6_ARATH^UPL6_ARATH^Q:5224-2285,H:1-978^65.72%ID^E:0^RecName: Full=E3 ubiquitin-protein ligase UPL6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UPL6_ARATH^UPL6_ARATH^Q:2174-2019,H:978-1029^73.08%ID^E:5e-15^RecName: Full=E3 ubiquitin-protein ligase UPL6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43794_c2_g3_i8.p1","2246-5224[-]","UPL6_ARATH^UPL6_ARATH^Q:1-980,H:1-978^65.72%ID^E:0^RecName: Full=E3 ubiquitin-protein ligase UPL6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00632.22^HECT^HECT-domain (ubiquitin-transferase)^726-983^E:1.7e-72",".",".","COG5021^ubiquitin protein ligase",".","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0042787^biological_process^protein ubiquitination involved in ubiquitin-dependent protein catabolic process","GO:0004842^molecular_function^ubiquitin-protein transferase activity",".","."]
["TRINITY_DN46539_c2_g1","leaves S. yangii","roots S. yangii",3.34313462512715,0,0,"TRINITY_DN46539_c2_g1_i1","TI205_ARATH^TI205_ARATH^Q:930-430,H:43-209^80.84%ID^E:2e-80^RecName: Full=Protein TIC 20-v, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46539_c2_g1_i1.p1","427-1077[-]","TI205_ARATH^TI205_ARATH^Q:50-216,H:43-209^80.84%ID^E:5e-92^RecName: Full=Protein TIC 20-v, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16166.2^TIC20^Chloroplast import apparatus Tic20-like^69-211^E:2.2e-52",".",".","ENOG4111UMD^protein transport","KEGG:ath:AT5G55710","GO:0009507^cellular_component^chloroplast`GO:0009706^cellular_component^chloroplast inner membrane`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0009579^cellular_component^thylakoid`GO:0015031^biological_process^protein transport",".",".","."]
["TRINITY_DN45941_c3_g2","leaves S. yangii","roots S. yangii",3.33312445535848,0,0,"TRINITY_DN45941_c3_g2_i4","PIP25_ARATH^PIP25_ARATH^Q:1077-244,H:1-283^82.69%ID^E:7e-166^RecName: Full=Probable aquaporin PIP2-5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45941_c3_g2_i4.p1","226-1212[-]","PIP25_ARATH^PIP25_ARATH^Q:46-323,H:1-283^82.69%ID^E:2e-167^RecName: Full=Probable aquaporin PIP2-5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^74-305^E:1.6e-83",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT3G54820`KO:K09872","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0015254^molecular_function^glycerol channel activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0034220^biological_process^ion transmembrane transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46931_c0_g1","leaves S. yangii","roots S. yangii",3.30615577788166,0,0,"TRINITY_DN46931_c0_g1_i9","ISPH_ORYSJ^ISPH_ORYSJ^Q:907-287,H:279-459^70.53%ID^E:4e-122^RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`ISPH_ORYSJ^ISPH_ORYSJ^Q:1256-975,H:187-280^84.04%ID^E:4e-122^RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46931_c0_g1_i9.p2","284-697[-]","ISPH_ORYSJ^ISPH_ORYSJ^Q:1-137,H:323-459^80.29%ID^E:5e-77^RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02401.15^LYTB^LytB protein^8-125^E:1.7e-29",".",".","COG0761^Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (By similarity)","KEGG:osa:4334003`KO:K03527","GO:0009570^cellular_component^chloroplast stroma`GO:0051538^molecular_function^3 iron, 4 sulfur cluster binding`GO:0051745^molecular_function^4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0050992^biological_process^dimethylallyl diphosphate biosynthetic process`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","GO:0046872^molecular_function^metal ion binding`GO:0051745^molecular_function^4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway`GO:0050992^biological_process^dimethylallyl diphosphate biosynthetic process",".","."]
["TRINITY_DN44787_c2_g1","leaves S. yangii","roots S. yangii",3.29501032945472,0,0,"TRINITY_DN44787_c2_g1_i2","WRK35_ARATH^WRK35_ARATH^Q:1197-1072,H:235-276^78.57%ID^E:8e-14^RecName: Full=Probable WRKY transcription factor 35;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44787_c2_g1_i2.p1","673-1227[-]","WRK35_ARATH^WRK35_ARATH^Q:11-52,H:235-276^78.57%ID^E:9e-16^RecName: Full=Probable WRKY transcription factor 35;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^6-49^E:1.4e-13",".",".","ENOG410YD4A^WRKY transcription factor","KEGG:ath:AT2G34830","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0009555^biological_process^pollen development`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44001_c1_g2","leaves S. yangii","roots S. yangii",3.28627575898273,0,0,"TRINITY_DN44001_c1_g2_i11","SECA1_ARATH^SECA1_ARATH^Q:612-3335,H:85-992^88.11%ID^E:0^RecName: Full=Protein translocase subunit SECA1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44001_c1_g2_i11.p1","372-3434[+]","SECA1_ARATH^SECA1_ARATH^Q:6-988,H:9-992^83.45%ID^E:0^RecName: Full=Protein translocase subunit SECA1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07517.11^SecA_DEAD^SecA DEAD-like domain^86-453^E:1.9e-122`PF00270.26^DEAD^DEAD/DEAH box helicase^169-285^E:2.8e-06`PF01043.17^SecA_PP_bind^SecA preprotein cross-linking domain^303-409^E:1e-35`PF07516.10^SecA_SW^SecA Wing and Scaffold domain^759-974^E:3.9e-53",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005524^molecular_function^ATP binding`GO:0017038^biological_process^protein import`GO:0006605^biological_process^protein targeting","GO:0005524^molecular_function^ATP binding`GO:0017038^biological_process^protein import`GO:0016020^cellular_component^membrane`GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN44395_c1_g5","leaves S. yangii","roots S. yangii",3.27145388077104,0,0,"TRINITY_DN44395_c1_g5_i3","CNGC2_ARATH^CNGC2_ARATH^Q:127-1356,H:305-726^73.22%ID^E:0^RecName: Full=Cyclic nucleotide-gated ion channel 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44395_c1_g5_i3.p1","97-1359[+]","CNGC2_ARATH^CNGC2_ARATH^Q:11-420,H:305-726^73.22%ID^E:0^RecName: Full=Cyclic nucleotide-gated ion channel 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00027.26^cNMP_binding^Cyclic nucleotide-binding domain^253-341^E:4.2e-07`PF00612.24^IQ^IQ calmodulin-binding motif^370-386^E:0.16",".",".","ENOG410XPSE^Potassium voltage-gated channel, subfamily H (Eag-related), member","KEGG:ath:AT5G15410`KO:K05391","GO:0016021^cellular_component^integral component of membrane`GO:0005622^cellular_component^intracellular`GO:0005886^cellular_component^plasma membrane`GO:0005262^molecular_function^calcium channel activity`GO:0005516^molecular_function^calmodulin binding`GO:0030552^molecular_function^cAMP binding`GO:0030553^molecular_function^cGMP binding`GO:0005222^molecular_function^intracellular cAMP activated cation channel activity`GO:0005221^molecular_function^intracellular cyclic nucleotide activated cation channel activity`GO:0005242^molecular_function^inward rectifier potassium channel activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0098655^biological_process^cation transmembrane transport`GO:0006952^biological_process^defense response`GO:0007263^biological_process^nitric oxide mediated signal transduction`GO:0009626^biological_process^plant-type hypersensitive response`GO:0071805^biological_process^potassium ion transmembrane transport`GO:0042391^biological_process^regulation of membrane potential","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46619_c3_g1","leaves S. yangii","roots S. yangii",3.26032241363405,0,0,"TRINITY_DN46619_c3_g1_i10","CRWN1_ARATH^CRWN1_ARATH^Q:265-3765,H:1-1127^43.58%ID^E:0^RecName: Full=Protein CROWDED NUCLEI 1 {ECO:0000303|PubMed:24308514};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46619_c3_g1_i10.p1","265-3783[+]","CRWN1_ARATH^CRWN1_ARATH^Q:1-1172,H:1-1132^43.95%ID^E:0^RecName: Full=Protein CROWDED NUCLEI 1 {ECO:0000303|PubMed:24308514};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111KVI^Nuclear matrix constituent protein","KEGG:ath:AT1G67230","GO:0000789^cellular_component^cytoplasmic chromatin`GO:0005829^cellular_component^cytosol`GO:0005635^cellular_component^nuclear envelope`GO:0005652^cellular_component^nuclear lamina`GO:0031965^cellular_component^nuclear membrane`GO:0034399^cellular_component^nuclear periphery`GO:0005654^cellular_component^nucleoplasm`GO:0005634^cellular_component^nucleus`GO:0006997^biological_process^nucleus organization`GO:0097298^biological_process^regulation of nucleus size",".",".","."]
["TRINITY_DN44759_c1_g2","leaves S. yangii","roots S. yangii",3.25384549922617,0,0,"TRINITY_DN44759_c1_g2_i9","AAP3_ARATH^AAP3_ARATH^Q:156-764,H:9-211^72.91%ID^E:7e-138^RecName: Full=Amino acid permease 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AAP3_ARATH^AAP3_ARATH^Q:1101-1319,H:260-332^90.41%ID^E:7e-138^RecName: Full=Amino acid permease 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AAP3_ARATH^AAP3_ARATH^Q:848-1003,H:214-259^75%ID^E:7e-138^RecName: Full=Amino acid permease 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44759_c1_g2_i9.p1","117-794[+]","AAP2_ARATH^AAP2_ARATH^Q:10-218,H:24-229^74.64%ID^E:1e-110^RecName: Full=Amino acid permease 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01490.15^Aa_trans^Transmembrane amino acid transporter protein^35-208^E:2.2e-50",".",".","COG0814^amino acid transport","KEGG:ath:AT5G09220","GO:0005887^cellular_component^integral component of plasma membrane`GO:0015293^molecular_function^symporter activity`GO:0015800^biological_process^acidic amino acid transport`GO:0015804^biological_process^neutral amino acid transport",".",".","."]
["TRINITY_DN45867_c0_g1","leaves S. yangii","roots S. yangii",3.25208713114426,0,0,"TRINITY_DN45867_c0_g1_i10","NSI_ORYSJ^NSI_ORYSJ^Q:924-1271,H:128-243^75%ID^E:8e-57^RecName: Full=Probable acetyltransferase NSI;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`NSI_ORYSJ^NSI_ORYSJ^Q:233-475,H:50-131^63.41%ID^E:5e-11^RecName: Full=Probable acetyltransferase NSI;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45867_c0_g1_i10.p1","104-550[+]","NSI_ARATH^NSI_ARATH^Q:32-124,H:30-127^60.2%ID^E:6e-28^RecName: Full=Acetyltransferase NSI;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZGB6^acetyltransferase","KEGG:ath:AT1G32070","GO:0009507^cellular_component^chloroplast`GO:0005634^cellular_component^nucleus`GO:0031248^cellular_component^protein acetyltransferase complex`GO:0004059^molecular_function^aralkylamine N-acetyltransferase activity`GO:0008080^molecular_function^N-acetyltransferase activity`GO:0004596^molecular_function^peptide alpha-N-acetyltransferase activity`GO:0030187^biological_process^melatonin biosynthetic process`GO:0006474^biological_process^N-terminal protein amino acid acetylation`GO:0016032^biological_process^viral process",".",".","."]
["TRINITY_DN44736_c4_g1","leaves S. yangii","roots S. yangii",3.24855497605805,0,0,"TRINITY_DN44736_c4_g1_i3","Y1815_ARATH^Y1815_ARATH^Q:401-252,H:51-100^74%ID^E:3e-18^RecName: Full=UPF0426 protein At1g28150, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44736_c4_g1_i3.p1","183-569[-]","Y1815_ARATH^Y1815_ARATH^Q:57-128,H:51-123^63.51%ID^E:8e-23^RecName: Full=UPF0426 protein At1g28150, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^12^0.467^YES",".","ENOG41122GH^UPF0426 protein","KEGG:ath:AT1G28150","GO:0010287^cellular_component^plastoglobule",".",".","."]
["TRINITY_DN38510_c0_g1","leaves S. yangii","roots S. yangii",3.24837723991074,0,0,"TRINITY_DN38510_c0_g1_i3","CLPP3_ARATH^CLPP3_ARATH^Q:2150-2482,H:199-309^74.77%ID^E:5e-50^RecName: Full=ATP-dependent Clp protease proteolytic subunit 3, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPP3_ARATH^CLPP3_ARATH^Q:359-700,H:50-168^55%ID^E:3e-31^RecName: Full=ATP-dependent Clp protease proteolytic subunit 3, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPP3_ARATH^CLPP3_ARATH^Q:1155-1493,H:83-201^54.62%ID^E:1e-27^RecName: Full=ATP-dependent Clp protease proteolytic subunit 3, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38510_c0_g1_i3.p3","2159-2485[+]","CLPP3_ARATH^CLPP3_ARATH^Q:1-108,H:202-309^74.07%ID^E:2e-54^RecName: Full=ATP-dependent Clp protease proteolytic subunit 3, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00574.20^CLP_protease^Clp protease^2-56^E:2.1e-15",".",".","COG0740^Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)","KEGG:ath:AT1G66670`KO:K01358","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009840^cellular_component^chloroplastic endopeptidase Clp complex`GO:0009532^cellular_component^plastid stroma`GO:0004252^molecular_function^serine-type endopeptidase activity",".",".","."]
["TRINITY_DN40421_c0_g1","leaves S. yangii","roots S. yangii",3.24370561905399,0,0,"TRINITY_DN40421_c0_g1_i4","CRS2B_ARATH^CRS2B_ARATH^Q:940-569,H:24-149^75.4%ID^E:2e-83^RecName: Full=Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CRS2B_ARATH^CRS2B_ARATH^Q:513-238,H:149-240^64.13%ID^E:2e-83^RecName: Full=Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40421_c0_g1_i4.p1","539-1042[-]","CRS2B_ARATH^CRS2B_ARATH^Q:35-166,H:24-157^75.37%ID^E:8e-71^RecName: Full=Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01195.16^Pept_tRNA_hydro^Peptidyl-tRNA hydrolase^56-166^E:1.4e-33",".",".","COG0193^The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)","KEGG:ath:AT5G16140`KO:K01056","GO:0009570^cellular_component^chloroplast stroma`GO:0030529^cellular_component^intracellular ribonucleoprotein complex`GO:0004045^molecular_function^aminoacyl-tRNA hydrolase activity`GO:0006397^biological_process^mRNA processing`GO:0008380^biological_process^RNA splicing","GO:0004045^molecular_function^aminoacyl-tRNA hydrolase activity",".","."]
["TRINITY_DN43174_c8_g2","leaves S. yangii","roots S. yangii",3.2419521450848,0,0,"TRINITY_DN43174_c8_g2_i1","RAF1_ARATH^RAF1_ARATH^Q:2093-999,H:68-420^51.91%ID^E:9e-111^RecName: Full=Rubisco accumulation factor 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43174_c8_g2_i1.p1","963-2336[-]","RAF1_ARATH^RAF1_ARATH^Q:1-457,H:1-431^48.03%ID^E:3e-126^RecName: Full=Rubisco accumulation factor 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YKCB^NA","KEGG:ath:AT5G28500","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma",".",".","."]
["TRINITY_DN44911_c0_g1","leaves S. yangii","roots S. yangii",3.23735590834171,0,0,"TRINITY_DN44911_c0_g1_i9","HS905_ARATH^HS905_ARATH^Q:1144-587,H:558-743^86.56%ID^E:3e-107^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HS905_ARATH^HS905_ARATH^Q:1657-1400,H:476-561^89.53%ID^E:4e-65^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HS905_ARATH^HS905_ARATH^Q:1916-1746,H:419-475^91.23%ID^E:4e-65^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44911_c0_g1_i9.p1","452-1162[-]","HS905_ARATH^HS905_ARATH^Q:7-236,H:558-780^77.39%ID^E:2e-121^RecName: Full=Heat shock protein 90-5, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00183.15^HSP90^Hsp90 protein^6-207^E:1e-67",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:ath:AT2G04030`KO:K09487","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0005774^cellular_component^vacuolar membrane`GO:0005524^molecular_function^ATP binding`GO:0009704^biological_process^de-etiolation`GO:0006457^biological_process^protein folding`GO:0045037^biological_process^protein import into chloroplast stroma`GO:0010157^biological_process^response to chlorate`GO:0009408^biological_process^response to heat`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN44827_c2_g1","leaves S. yangii","roots S. yangii",3.22369435169463,0,0,"TRINITY_DN44827_c2_g1_i4","TPIC_SPIOL^TPIC_SPIOL^Q:22-552,H:146-322^88.14%ID^E:5e-107^RecName: Full=Triosephosphate isomerase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia",".","TRINITY_DN44827_c2_g1_i4.p1","1-555[+]","TPIC_SPIOL^TPIC_SPIOL^Q:8-184,H:146-322^88.14%ID^E:1e-113^RecName: Full=Triosephosphate isomerase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Anserineae; Spinacia","PF00121.15^TIM^Triosephosphate isomerase^8-174^E:8.8e-67",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004807^molecular_function^triose-phosphate isomerase activity`GO:0006096^biological_process^glycolytic process`GO:0019253^biological_process^reductive pentose-phosphate cycle","GO:0004807^molecular_function^triose-phosphate isomerase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44809_c3_g5","leaves S. yangii","roots S. yangii",3.21217516132789,0,0,"TRINITY_DN44809_c3_g5_i1","CUT1A_ARATH^CUT1A_ARATH^Q:326-763,H:13-164^61.84%ID^E:9e-51^RecName: Full=Protein CURVATURE THYLAKOID 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44809_c3_g5_i1.p1","287-766[+]","CUT1A_ARATH^CUT1A_ARATH^Q:1-159,H:3-164^60.61%ID^E:2e-59^RecName: Full=Protein CURVATURE THYLAKOID 1A, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14159.3^CAAD^CAAD domains of cyanobacterial aminoacyl-tRNA synthetase^74-157^E:7.9e-32",".",".","ENOG4111YWG^NA",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0010287^cellular_component^plastoglobule`GO:0009579^cellular_component^thylakoid",".",".","."]
["TRINITY_DN45018_c1_g1","leaves S. yangii","roots S. yangii",3.20782716977658,0,0,"TRINITY_DN45018_c1_g1_i9","WEB1_ARATH^WEB1_ARATH^Q:3569-1497,H:137-800^61.41%ID^E:0^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45018_c1_g1_i9.p1","1461-4073[-]","WEB1_ARATH^WEB1_ARATH^Q:205-863,H:136-804^64.09%ID^E:0^RecName: Full=Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05701.8^WEMBL^Weak chloroplast movement under blue light^222-787^E:1.5e-234",".",".","ENOG410YG1U^Pfam:DUF827","KEGG:ath:AT2G26570","GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0009904^biological_process^chloroplast accumulation movement`GO:0009903^biological_process^chloroplast avoidance movement",".",".","."]
["TRINITY_DN44719_c4_g5","leaves S. yangii","roots S. yangii",3.20229016565805,0,0,"TRINITY_DN44719_c4_g5_i1","PDRP1_ARATH^PDRP1_ARATH^Q:303-1379,H:47-403^63.89%ID^E:9e-160^RecName: Full=Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44719_c4_g5_i1.p1","156-1382[+]","PDRP1_ARATH^PDRP1_ARATH^Q:1-408,H:1-403^59.56%ID^E:6e-163^RecName: Full=Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03618.11^Kinase-PPPase^Kinase/pyrophosphorylase^121-389^E:2.4e-88",".",".","COG1806^Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation (By similarity)","KEGG:ath:AT4G21210","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005524^molecular_function^ATP binding`GO:0004721^molecular_function^phosphoprotein phosphatase activity`GO:0016776^molecular_function^phosphotransferase activity, phosphate group as acceptor`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006470^biological_process^protein dephosphorylation`GO:0006468^biological_process^protein phosphorylation","GO:0005524^molecular_function^ATP binding`GO:0016772^molecular_function^transferase activity, transferring phosphorus-containing groups",".","."]
["TRINITY_DN45722_c0_g3","leaves S. yangii","roots S. yangii",3.19872216273829,0,0,"TRINITY_DN45722_c0_g3_i3","PIP21_MAIZE^PIP21_MAIZE^Q:1-330,H:181-290^90%ID^E:2e-63^RecName: Full=Aquaporin PIP2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN45722_c0_g3_i3.p1","1-339[+]","PIP21_MAIZE^PIP21_MAIZE^Q:1-110,H:181-290^90%ID^E:2e-65^RecName: Full=Aquaporin PIP2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF00230.17^MIP^Major intrinsic protein^1-91^E:4.2e-33",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:zma:541888`KO:K09872","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005215^molecular_function^transporter activity","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN43906_c3_g1","leaves S. yangii","roots S. yangii",3.19700108537467,0,0,"TRINITY_DN43906_c3_g1_i4","RFS5_ARATH^RFS5_ARATH^Q:221-1651,H:3-476^64.11%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RFS5_ARATH^RFS5_ARATH^Q:1729-2661,H:475-783^70.1%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43906_c3_g1_i4.p1","218-1687[+]","RFS5_ARATH^RFS5_ARATH^Q:2-478,H:3-476^64.32%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05691.9^Raffinose_syn^Raffinose synthase or seed imbibition protein Sip1^25-478^E:7e-195",".",".","ENOG410YBUA^galactinol--sucrose","KEGG:ath:AT5G40390`KO:K06617","GO:0009507^cellular_component^chloroplast`GO:0047274^molecular_function^galactinol-sucrose galactosyltransferase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0009737^biological_process^response to abscisic acid`GO:0006979^biological_process^response to oxidative stress`GO:0009414^biological_process^response to water deprivation",".",".","."]
["TRINITY_DN46432_c3_g1","leaves S. yangii","roots S. yangii",3.17308141583583,0,0,"TRINITY_DN46432_c3_g1_i18","Y5520_ARATH^Y5520_ARATH^Q:711-1424,H:146-383^79.83%ID^E:2e-147^RecName: Full=Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5520_ARATH^Y5520_ARATH^Q:400-657,H:62-147^72.09%ID^E:2e-147^RecName: Full=Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5520_ARATH^Y5520_ARATH^Q:2398-2955,H:342-532^67.18%ID^E:4e-63^RecName: Full=Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46432_c3_g1_i18.p1","2542-2964[+]","Y5520_ARATH^Y5520_ARATH^Q:1-138,H:395-532^80.43%ID^E:4e-72^RecName: Full=Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0661^Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)","KEGG:ath:AT5G05200`KO:K08869","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity",".",".","."]
["TRINITY_DN46580_c0_g4","leaves S. yangii","roots S. yangii",3.16821731082875,0,0,"TRINITY_DN46580_c0_g4_i3","OPR1_ARATH^OPR1_ARATH^Q:1270-230,H:26-372^75.5%ID^E:0^RecName: Full=12-oxophytodienoate reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46580_c0_g4_i3.p1","227-847[-]","OPR1_SOLLC^OPR1_SOLLC^Q:1-203,H:171-373^74.88%ID^E:3e-115^RecName: Full=12-oxophytodienoate reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00724.17^Oxidored_FMN^NADH:flavin oxidoreductase / NADH oxidase family^2-180^E:3.7e-51",".",".","COG1902^NADH flavin oxidoreductase, NADH oxidase","KEGG:sly:544239`KO:K05894","GO:0005737^cellular_component^cytoplasm`GO:0005622^cellular_component^intracellular`GO:0016629^molecular_function^12-oxophytodienoate reductase activity`GO:0010181^molecular_function^FMN binding`GO:0003959^molecular_function^NADPH dehydrogenase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0031408^biological_process^oxylipin biosynthetic process","GO:0010181^molecular_function^FMN binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47056_c1_g1","leaves S. yangii","roots S. yangii",3.16733559320475,0,0,"TRINITY_DN47056_c1_g1_i10","SYTM2_ARATH^SYTM2_ARATH^Q:857-2404,H:135-650^80.62%ID^E:0^RecName: Full=Threonine--tRNA ligase, chloroplastic/mitochondrial 2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SYTM2_ARATH^SYTM2_ARATH^Q:562-720,H:82-134^83.02%ID^E:4e-20^RecName: Full=Threonine--tRNA ligase, chloroplastic/mitochondrial 2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47056_c1_g1_i10.p1","929-2407[+]","SYTM2_ARATH^SYTM2_ARATH^Q:1-492,H:159-650^80.69%ID^E:0^RecName: Full=Threonine--tRNA ligase, chloroplastic/mitochondrial 2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07973.11^tRNA_SAD^Threonyl and Alanyl tRNA synthetase second additional domain^20-72^E:3.1e-11`PF00587.22^tRNA-synt_2b^tRNA synthetase class II core domain (G, H, P, S and T)^179-384^E:1.3e-42`PF03129.17^HGTP_anticodon^Anticodon binding domain^396-483^E:6.7e-18",".",".","COG0441^threonine-tRNA ligase activity","KEGG:ath:AT2G04842`KO:K01868","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0004829^molecular_function^threonine-tRNA ligase activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0006435^biological_process^threonyl-tRNA aminoacylation","GO:0005524^molecular_function^ATP binding`GO:0016876^molecular_function^ligase activity, forming aminoacyl-tRNA and related compounds`GO:0043039^biological_process^tRNA aminoacylation`GO:0000166^molecular_function^nucleotide binding`GO:0004812^molecular_function^aminoacyl-tRNA ligase activity`GO:0006418^biological_process^tRNA aminoacylation for protein translation",".","."]
["TRINITY_DN46508_c0_g1","leaves S. yangii","roots S. yangii",3.16367412344811,0,0,"TRINITY_DN46508_c0_g1_i1","PP287_ARATH^PP287_ARATH^Q:1975-437,H:1-512^73.74%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g59040;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46508_c0_g1_i1.p1","251-1975[-]","PP287_ARATH^PP287_ARATH^Q:1-541,H:1-533^70.83%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g59040;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^142-187^E:6.1e-05`PF01535.17^PPR^PPR repeat^145-170^E:0.0016`PF13041.3^PPR_2^PPR repeat family^173-220^E:2.7e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^174-221^E:1e-06`PF01535.17^PPR^PPR repeat^176-205^E:0.00031`PF13812.3^PPR_3^Pentatricopeptide repeat domain^197-243^E:0.0047`PF13812.3^PPR_3^Pentatricopeptide repeat domain^243-291^E:1.2e-05`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^245-365^E:3.3e-08`PF13041.3^PPR_2^PPR repeat family^247-290^E:8.8e-08`PF01535.17^PPR^PPR repeat^250-279^E:0.00035`PF13812.3^PPR_3^Pentatricopeptide repeat domain^302-360^E:2.4e-11`PF12854.4^PPR_1^PPR repeat^312-341^E:3.1e-06`PF13041.3^PPR_2^PPR repeat family^313-361^E:3.4e-12`PF01535.17^PPR^PPR repeat^316-346^E:1.3e-06`PF13041.3^PPR_2^PPR repeat family^352-396^E:2.3e-10`PF01535.17^PPR^PPR repeat^352-381^E:5.2e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^353-397^E:5.1e-07`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^366-453^E:8.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^372-430^E:6e-10`PF13041.3^PPR_2^PPR repeat family^383-432^E:1.3e-11`PF01535.17^PPR^PPR repeat^387-416^E:9.1e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^409-468^E:8.2e-08`PF12854.4^PPR_1^PPR repeat^414-446^E:4.3e-06`PF01535.17^PPR^PPR repeat^421-451^E:9.2e-05`PF01535.17^PPR^PPR repeat^457-486^E:0.015",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G59040",".",".",".","."]
["TRINITY_DN46287_c2_g8","leaves S. yangii","roots S. yangii",3.1546380614434,0,0,"TRINITY_DN46287_c2_g8_i2","AB40G_ARATH^AB40G_ARATH^Q:1209-532,H:1112-1337^75.22%ID^E:9e-113^RecName: Full=ABC transporter G family member 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB40G_ARATH^AB40G_ARATH^Q:448-194,H:1339-1423^45.88%ID^E:9e-113^RecName: Full=ABC transporter G family member 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46287_c2_g8_i2.p1","385-1215[-]","PDR1_TOBAC^PDR1_TOBAC^Q:3-228,H:1124-1349^77.88%ID^E:2e-121^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01061.21^ABC2_membrane^ABC-2 type transporter^41-230^E:2.6e-49",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN41825_c0_g1","leaves S. yangii","roots S. yangii",3.15100885514688,0,0,"TRINITY_DN41825_c0_g1_i1","AB7G_ARATH^AB7G_ARATH^Q:272-1948,H:65-624^82.14%ID^E:0^RecName: Full=ABC transporter G family member 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB7G_ARATH^AB7G_ARATH^Q:2292-2429,H:621-666^76.09%ID^E:4e-14^RecName: Full=ABC transporter G family member 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41825_c0_g1_i1.p1","119-1987[+]","AB7G_ARATH^AB7G_ARATH^Q:26-610,H:35-624^80.17%ID^E:0^RecName: Full=ABC transporter G family member 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^78-230^E:1.9e-23`PF03215.12^Rad17^Rad17 cell cycle checkpoint protein^78-161^E:7e-05`PF01061.21^ABC2_membrane^ABC-2 type transporter^378-589^E:1.4e-42","sigP:1^29^0.56^YES",".","COG1131^(ABC) transporter","KEGG:ath:AT2G01320","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0055085^biological_process^transmembrane transport`GO:0006810^biological_process^transport","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47273_c1_g1","leaves S. yangii","roots S. yangii",3.15006844169591,0,0,"TRINITY_DN47273_c1_g1_i3","TRB1_ARATH^TRB1_ARATH^Q:140-847,H:1-237^62.5%ID^E:4e-95^RecName: Full=Telomere repeat-binding factor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47273_c1_g1_i3.p1","140-1036[+]","TRB1_ARATH^TRB1_ARATH^Q:1-296,H:1-297^66%ID^E:4e-101^RecName: Full=Telomere repeat-binding factor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^5-55^E:3.4e-09`PF00538.16^Linker_histone^linker histone H1 and H5 family^125-182^E:2.5e-08",".",".","ENOG4111SQS^single myb histone","KEGG:ath:AT1G49950`KO:K09422","GO:0000785^cellular_component^chromatin`GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003691^molecular_function^double-stranded telomeric DNA binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006334^biological_process^nucleosome assembly`GO:0009737^biological_process^response to abscisic acid`GO:0009733^biological_process^response to auxin`GO:0046686^biological_process^response to cadmium ion`GO:0009723^biological_process^response to ethylene`GO:0009739^biological_process^response to gibberellin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0009651^biological_process^response to salt stress`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN41418_c0_g1","leaves S. yangii","roots S. yangii",3.14901925874077,0,0,"TRINITY_DN41418_c0_g1_i4","RK9_ARATH^RK9_ARATH^Q:1053-628,H:56-197^82.39%ID^E:2e-70^RecName: Full=50S ribosomal protein L9, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41418_c0_g1_i4.p1","625-1206[-]","RK9_ARATH^RK9_ARATH^Q:1-193,H:1-197^74.37%ID^E:2e-90^RecName: Full=50S ribosomal protein L9, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01281.16^Ribosomal_L9_N^Ribosomal protein L9, N-terminal domain^47-92^E:6.4e-18`PF03948.11^Ribosomal_L9_C^Ribosomal protein L9, C-terminal domain^109-191^E:6.4e-21",".",".","ENOG4111HFB^ribosomal protein l9","KEGG:ath:AT3G44890`KO:K02939","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005739^cellular_component^mitochondrion`GO:0000311^cellular_component^plastid large ribosomal subunit`GO:0019843^molecular_function^rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN44140_c1_g1","leaves S. yangii","roots S. yangii",3.14787973342435,0,0,"TRINITY_DN44140_c1_g1_i6","DADIS_PANGI^DADIS_PANGI^Q:33-1967,H:79-726^70.68%ID^E:0^RecName: Full=Dammarenediol II synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN44140_c1_g1_i6.p1","3-1967[+]","DADIS_PANGI^DADIS_PANGI^Q:11-655,H:79-726^70.68%ID^E:0^RecName: Full=Dammarenediol II synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF13249.3^SQHop_cyclase_N^Squalene-hopene cyclase N-terminal domain^33-293^E:8e-40`PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^81-123^E:1.4e-08`PF13243.3^SQHop_cyclase_C^Squalene-hopene cyclase C-terminal domain^347-653^E:1.8e-39`PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^524-564^E:3.2e-08`PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^572-626^E:1.6e-08",".",".",".","KEGG:ag:BAF33291`KO:K15817","GO:0016021^cellular_component^integral component of membrane`GO:0016866^molecular_function^intramolecular transferase activity`GO:0016829^molecular_function^lyase activity","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN47229_c0_g1","leaves S. yangii","roots S. yangii",3.14461608146802,0,0,"TRINITY_DN47229_c0_g1_i2","USPAL_ARATH^USPAL_ARATH^Q:381-839,H:7-163^28.74%ID^E:1e-12^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47229_c0_g1_i2.p1","342-869[+]","USPAL_ARATH^USPAL_ARATH^Q:14-166,H:7-163^28.74%ID^E:6e-14^RecName: Full=Universal stress protein A-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00582.23^Usp^Universal stress protein family^13-165^E:1.7e-28",".",".","ENOG41119AN^Universal stress protein","KEGG:ath:AT3G01520","GO:0005886^cellular_component^plasma membrane`GO:0016208^molecular_function^AMP binding`GO:0006950^biological_process^response to stress","GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN47118_c0_g2","leaves S. yangii","roots S. yangii",3.13593807876745,0,0,"TRINITY_DN47118_c0_g2_i14","GWD1_CITRE^GWD1_CITRE^Q:4908-1549,H:1-1120^69.3%ID^E:0^RecName: Full=Alpha-glucan water dikinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus`GWD1_CITRE^GWD1_CITRE^Q:1295-306,H:1146-1475^81.21%ID^E:3e-165^RecName: Full=Alpha-glucan water dikinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus",".","TRINITY_DN47118_c0_g2_i14.p1","1543-4908[-]","GWD1_CITRE^GWD1_CITRE^Q:1-1120,H:1-1120^69.3%ID^E:0^RecName: Full=Alpha-glucan water dikinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus",".",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0050521^molecular_function^alpha-glucan, water dikinase activity`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0005975^biological_process^carbohydrate metabolic process",".",".","."]
["TRINITY_DN43745_c1_g1","leaves S. yangii","roots S. yangii",3.12947837950224,0,0,"TRINITY_DN43745_c1_g1_i5","CBSX1_ARATH^CBSX1_ARATH^Q:544-167,H:71-196^76.98%ID^E:1e-60^RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43745_c1_g1_i5.p3","149-514[-]","CBSX1_ARATH^CBSX1_ARATH^Q:1-116,H:81-196^77.59%ID^E:2e-60^RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00571.25^CBS^CBS domain^6-51^E:3.7e-13`PF00571.25^CBS^CBS domain^91-115^E:0.0054",".",".","ENOG4111TWY^(CBS) domain","KEGG:ath:AT4G36910","GO:0009507^cellular_component^chloroplast`GO:0045454^biological_process^cell redox homeostasis",".",".","."]
["TRINITY_DN44614_c6_g1","leaves S. yangii","roots S. yangii",3.12347387643501,0,0,"TRINITY_DN44614_c6_g1_i8","TSS_ARATH^TSS_ARATH^Q:179-3610,H:1-1167^61.17%ID^E:0^RecName: Full=Protein TSS {ECO:0000303|PubMed:21185286};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44614_c6_g1_i8.p1","179-3613[+]","TSS_ARATH^TSS_ARATH^Q:1-1144,H:1-1167^61.17%ID^E:0^RecName: Full=Protein TSS {ECO:0000303|PubMed:21185286};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF15044.3^CLU_N^Mitochondrial function, CLU-N-term^48-119^E:1.1e-06`PF12807.4^eIF3_p135^Translation initiation factor eIF3 subunit 135^704-789^E:2e-19`PF12807.4^eIF3_p135^Translation initiation factor eIF3 subunit 135^798-840^E:0.00013`PF13424.3^TPR_12^Tetratricopeptide repeat^878-942^E:6.8e-09`PF13424.3^TPR_12^Tetratricopeptide repeat^910-980^E:3e-13`PF13374.3^TPR_10^Tetratricopeptide repeat^910-951^E:5.8e-09`PF13181.3^TPR_8^Tetratricopeptide repeat^911-942^E:0.066`PF13424.3^TPR_12^Tetratricopeptide repeat^994-1068^E:6.9e-11`PF13374.3^TPR_10^Tetratricopeptide repeat^994-1033^E:6.2e-07",".",".","ENOG410XQUQ^Involved in proper cytoplasmic distribution of mitochondria (By similarity)","KEGG:ath:AT4G28080`KO:K03255","GO:0007049^biological_process^cell cycle`GO:0007275^biological_process^multicellular organism development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN40184_c0_g1","leaves S. yangii","roots S. yangii",3.12082204761288,0,0,"TRINITY_DN40184_c0_g1_i5","HEMH_ORYSI^HEMH_ORYSI^Q:970-2343,H:64-520^83.95%ID^E:0^RecName: Full=Ferrochelatase-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN40184_c0_g1_i5.p1","916-2364[+]","HEMH_ORYSI^HEMH_ORYSI^Q:19-481,H:64-525^84.12%ID^E:0^RecName: Full=Ferrochelatase-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00762.16^Ferrochelatase^Ferrochelatase^69-392^E:1.2e-112",".",".","COG0276^Catalyzes the ferrous insertion into protoporphyrin IX (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0004325^molecular_function^ferrochelatase activity`GO:0006783^biological_process^heme biosynthetic process","GO:0004325^molecular_function^ferrochelatase activity`GO:0006783^biological_process^heme biosynthetic process",".","."]
["TRINITY_DN41675_c0_g1","leaves S. yangii","roots S. yangii",3.11146938821907,0,0,"TRINITY_DN41675_c0_g1_i7","Y1814_ARATH^Y1814_ARATH^Q:1485-1844,H:236-355^69.17%ID^E:2e-70^RecName: Full=Uncharacterized methyltransferase At1g78140, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1814_ARATH^Y1814_ARATH^Q:1171-1368,H:170-235^71.21%ID^E:2e-70^RecName: Full=Uncharacterized methyltransferase At1g78140, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1814_ARATH^Y1814_ARATH^Q:569-871,H:73-173^55.88%ID^E:2e-30^RecName: Full=Uncharacterized methyltransferase At1g78140, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41675_c0_g1_i7.p1","326-979[+]","Y1814_ARATH^Y1814_ARATH^Q:82-182,H:73-173^55.88%ID^E:1e-33^RecName: Full=Uncharacterized methyltransferase At1g78140, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG2226^Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2)","KEGG:ath:AT1G78140","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0008168^molecular_function^methyltransferase activity",".",".","."]
["TRINITY_DN40196_c1_g1","leaves S. yangii","roots S. yangii",3.10266670536245,0,0,"TRINITY_DN40196_c1_g1_i1","SUT3_STYHA^SUT3_STYHA^Q:2391-640,H:15-603^66.1%ID^E:0^RecName: Full=Low affinity sulfate transporter 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Stylosanthes`SUT3_STYHA^SUT3_STYHA^Q:350-231,H:597-636^60%ID^E:9e-07^RecName: Full=Low affinity sulfate transporter 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Stylosanthes",".","TRINITY_DN40196_c1_g1_i1.p1","583-2481[-]","SUT3_STYHA^SUT3_STYHA^Q:26-614,H:10-603^66.05%ID^E:0^RecName: Full=Low affinity sulfate transporter 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Stylosanthes","PF00916.17^Sulfate_transp^Sulfate permease family^92-471^E:3.1e-129`PF01740.18^STAS^STAS domain^526-608^E:4.4e-17",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0008271^molecular_function^secondary active sulfate transmembrane transporter activity","GO:0015116^molecular_function^sulfate transmembrane transporter activity`GO:0008272^biological_process^sulfate transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN102139_c0_g1","leaves S. yangii","roots S. yangii",3.06913498670052,0,0,"TRINITY_DN102139_c0_g1_i1","PP266_ARATH^PP266_ARATH^Q:955-464,H:63-223^31.18%ID^E:2e-11^RecName: Full=Pentatricopeptide repeat-containing protein At3g46870;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN102139_c0_g1_i1.p1","380-1066[-]","PP266_ARATH^PP266_ARATH^Q:38-201,H:63-223^31.18%ID^E:2e-12^RecName: Full=Pentatricopeptide repeat-containing protein At3g46870;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YDVV^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G46870","GO:0009507^cellular_component^chloroplast`GO:0008270^molecular_function^zinc ion binding",".",".","."]
["TRINITY_DN44163_c0_g2","leaves S. yangii","roots S. yangii",3.06584036157945,0,0,"TRINITY_DN44163_c0_g2_i3","PHOT1_ARATH^PHOT1_ARATH^Q:2334-265,H:310-996^74.18%ID^E:0^RecName: Full=Phototropin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHOT1_ARATH^PHOT1_ARATH^Q:1851-1327,H:178-357^37.1%ID^E:2e-26^RecName: Full=Phototropin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44163_c0_g2_i3.p1","262-2262[-]","PHOT1_ARATH^PHOT1_ARATH^Q:1-666,H:331-996^75.48%ID^E:0^RecName: Full=Phototropin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PHOT1_ARATH^PHOT1_ARATH^Q:138-312,H:178-357^37.1%ID^E:1e-26^RecName: Full=Phototropin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13426.4^PAS_9^PAS domain^162-254^E:7.9e-21`PF00989.22^PAS^PAS fold^165-254^E:2.1e-07`PF08447.9^PAS_3^PAS fold^166-251^E:4e-07`PF00069.22^Pkinase^Protein kinase domain^342-627^E:2.1e-64`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^344-612^E:1.6e-27`PF14531.3^Kinase-like^Kinase-like^434-611^E:1.6e-06",".",".","COG2202^Histidine kinase","KEGG:ath:AT3G45780`KO:K08282","GO:0009986^cellular_component^cell surface`GO:0005737^cellular_component^cytoplasm`GO:0009898^cellular_component^cytoplasmic side of plasma membrane`GO:0005773^cellular_component^vacuole`GO:0005524^molecular_function^ATP binding`GO:0009882^molecular_function^blue light photoreceptor activity`GO:0010181^molecular_function^FMN binding`GO:0042802^molecular_function^identical protein binding`GO:0016301^molecular_function^kinase activity`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009785^biological_process^blue light signaling pathway`GO:0009904^biological_process^chloroplast accumulation movement`GO:0009903^biological_process^chloroplast avoidance movement`GO:0007623^biological_process^circadian rhythm`GO:0035556^biological_process^intracellular signal transduction`GO:0010362^biological_process^negative regulation of anion channel activity by blue light`GO:0009638^biological_process^phototropism`GO:0046777^biological_process^protein autophosphorylation`GO:0018298^biological_process^protein-chromophore linkage`GO:0010155^biological_process^regulation of proton transport`GO:0010119^biological_process^regulation of stomatal movement`GO:0009637^biological_process^response to blue light","GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45628_c3_g1","leaves S. yangii","roots S. yangii",3.04178402632831,0,0,"TRINITY_DN45628_c3_g1_i1","APX3_ARATH^APX3_ARATH^Q:2329-2772,H:135-283^82.55%ID^E:1e-48^RecName: Full=L-ascorbate peroxidase 3, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45628_c3_g1_i1.p1","2323-2787[+]","APX3_ARATH^APX3_ARATH^Q:3-154,H:135-287^82.35%ID^E:2e-74^RecName: Full=L-ascorbate peroxidase 3, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^4-92^E:2.6e-18",".",".","COG0376^Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (By similarity)","KEGG:ath:AT4G35000`KO:K00434","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0046861^cellular_component^glyoxysomal membrane`GO:0009514^cellular_component^glyoxysome`GO:0016021^cellular_component^integral component of membrane`GO:0005739^cellular_component^mitochondrion`GO:0005778^cellular_component^peroxisomal membrane`GO:0005777^cellular_component^peroxisome`GO:0009506^cellular_component^plasmodesma`GO:0009536^cellular_component^plastid`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0020037^molecular_function^heme binding`GO:0016688^molecular_function^L-ascorbate peroxidase activity`GO:0046872^molecular_function^metal ion binding`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0009735^biological_process^response to cytokinin`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN20075_c0_g1","leaves S. yangii","roots S. yangii",3.03922046392643,0,0,"TRINITY_DN20075_c0_g1_i1","AAED1_ARATH^AAED1_ARATH^Q:1018-326,H:24-247^32.49%ID^E:1e-26^RecName: Full=Thioredoxin-like protein AAED1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN20075_c0_g1_i1.p1","308-1081[-]","AAED1_ARATH^AAED1_ARATH^Q:22-252,H:24-247^32.49%ID^E:2e-27^RecName: Full=Thioredoxin-like protein AAED1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00578.18^AhpC-TSA^AhpC/TSA family^79-181^E:4.8e-08`PF13911.3^AhpC-TSA_2^AhpC/TSA antioxidant enzyme^120-237^E:5.8e-22",".",".","ENOG410XVW9^AhpC/TSA family","KEGG:ath:AT2G37240","GO:0009507^cellular_component^chloroplast","GO:0016209^molecular_function^antioxidant activity`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43513_c0_g1","leaves S. yangii","roots S. yangii",3.03192997953993,0,0,"TRINITY_DN43513_c0_g1_i3","EFTM_ARATH^EFTM_ARATH^Q:3998-2724,H:1-433^78.98%ID^E:0^RecName: Full=Elongation factor Tu, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43513_c0_g1_i3.p1","2700-3998[-]","EFTM_ARATH^EFTM_ARATH^Q:1-425,H:1-433^78.98%ID^E:0^RecName: Full=Elongation factor Tu, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00009.24^GTP_EFTU^Elongation factor Tu GTP binding domain^59-252^E:5.2e-57`PF01926.20^MMR_HSR1^50S ribosome-binding GTPase^64-169^E:6e-05`PF03144.22^GTP_EFTU_D2^Elongation factor Tu domain 2^276-345^E:1.5e-16`PF03143.14^GTP_EFTU_D3^Elongation factor Tu C-terminal domain^351-425^E:3.1e-18",".",".","COG0050^This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity)","KEGG:ath:AT4G02930`KO:K02358","GO:0005618^cellular_component^cell wall`GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0050897^molecular_function^cobalt ion binding`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003746^molecular_function^translation elongation factor activity`GO:0008270^molecular_function^zinc ion binding`GO:0046686^biological_process^response to cadmium ion","GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN46736_c1_g1","leaves S. yangii","roots S. yangii",3.02460124966371,0,0,"TRINITY_DN46736_c1_g1_i5","LOX6_ARATH^LOX6_ARATH^Q:1692-3140,H:431-917^71.31%ID^E:0^RecName: Full=Lipoxygenase 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LOX6_ARATH^LOX6_ARATH^Q:350-1621,H:15-436^50.57%ID^E:0^RecName: Full=Lipoxygenase 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46736_c1_g1_i5.p2","323-1627[+]","LOX6_ARATH^LOX6_ARATH^Q:10-433,H:15-436^50.8%ID^E:2e-130^RecName: Full=Lipoxygenase 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00305.16^Lipoxygenase^Lipoxygenase^225-433^E:1.2e-71",".",".","ENOG410YN4N^Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)","KEGG:ath:AT1G67560`KO:K00454","GO:0009507^cellular_component^chloroplast`GO:0005886^cellular_component^plasma membrane`GO:0016165^molecular_function^linoleate 13S-lipoxygenase activity`GO:0046872^molecular_function^metal ion binding`GO:0009695^biological_process^jasmonic acid biosynthetic process`GO:0034440^biological_process^lipid oxidation`GO:0031408^biological_process^oxylipin biosynthetic process`GO:0009611^biological_process^response to wounding","GO:0016702^molecular_function^oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47498_c1_g2","leaves S. yangii","roots S. yangii",3.00489304952703,0,0,"TRINITY_DN47498_c1_g2_i3","Y3295_ARATH^Y3295_ARATH^Q:1155-1748,H:61-258^81.82%ID^E:2e-106^RecName: Full=CBS domain-containing protein CBSCBSPB3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3295_ARATH^Y3295_ARATH^Q:1215-1547,H:250-360^40.18%ID^E:1e-15^RecName: Full=CBS domain-containing protein CBSCBSPB3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47498_c1_g2_i3.p1","1236-1748[+]","Y3295_ARATH^Y3295_ARATH^Q:1-171,H:88-258^80.7%ID^E:5e-95^RecName: Full=CBS domain-containing protein CBSCBSPB3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3295_ARATH^Y3295_ARATH^Q:6-104,H:262-360^40%ID^E:2e-15^RecName: Full=CBS domain-containing protein CBSCBSPB3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00571.25^CBS^CBS domain^44-88^E:1.9e-07",".",".","COG0517^Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)","KEGG:ath:AT3G52950","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN42286_c0_g1","leaves S. yangii","roots S. yangii",2.99012837391162,0,0,"TRINITY_DN42286_c0_g1_i7","Y4139_ARATH^Y4139_ARATH^Q:1525-263,H:266-682^88.84%ID^E:0^RecName: Full=Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4139_ARATH^Y4139_ARATH^Q:2694-2146,H:90-271^86.34%ID^E:1e-98^RecName: Full=Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42286_c0_g1_i7.p1","260-1258[-]","Y4139_ARATH^Y4139_ARATH^Q:1-332,H:355-682^86.75%ID^E:0^RecName: Full=Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0661^Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)","KEGG:ath:AT4G31390","GO:0009507^cellular_component^chloroplast`GO:0010287^cellular_component^plastoglobule`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0015996^biological_process^chlorophyll catabolic process`GO:0080183^biological_process^response to photooxidative stress",".",".","."]
["TRINITY_DN40012_c0_g1","leaves S. yangii","roots S. yangii",2.98189566105138,0,0,"TRINITY_DN40012_c0_g1_i5","AB7I_ARATH^AB7I_ARATH^Q:2026-644,H:39-475^58.87%ID^E:0^RecName: Full=Protein ABCI7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40012_c0_g1_i5.p1","617-2134[-]","AB7I_ARATH^AB7I_ARATH^Q:25-497,H:27-475^58.65%ID^E:0^RecName: Full=Protein ABCI7, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01458.14^UPF0051^Uncharacterized protein family (UPF0051)^226-472^E:1.7e-56",".",".","COG0719^Fe-S assembly protein","KEGG:ath:AT1G32500`KO:K09015","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0005215^molecular_function^transporter activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0016226^biological_process^iron-sulfur cluster assembly`GO:0010027^biological_process^thylakoid membrane organization`GO:0006810^biological_process^transport","GO:0016226^biological_process^iron-sulfur cluster assembly",".","."]
["TRINITY_DN44079_c4_g1","leaves S. yangii","roots S. yangii",2.97912250454778,0,0,"TRINITY_DN44079_c4_g1_i14","CIA30_ARATH^CIA30_ARATH^Q:1048-1590,H:32-223^25.74%ID^E:1e-09^RecName: Full=Probable complex I intermediate-associated protein 30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44079_c4_g1_i14.p1","274-2082[+]","CIA30_ARATH^CIA30_ARATH^Q:259-439,H:32-223^25.76%ID^E:8e-10^RecName: Full=Probable complex I intermediate-associated protein 30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05368.10^NmrA^NmrA-like family^131-202^E:2.2e-08`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^131-204^E:3.4e-06`PF02254.15^TrkA_N^TrkA-N domain^132-199^E:8.2e-06`PF13460.3^NAD_binding_10^NAD(P)H-binding^135-251^E:1.3e-10`PF08547.9^CIA30^Complex I intermediate-associated protein 30 (CIA30)^273-434^E:5e-43`PF13460.3^NAD_binding_10^NAD(P)H-binding^446-545^E:4.1e-15",".",".","ENOG410XQPB^Complex I",".","GO:0005739^cellular_component^mitochondrion","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0006813^biological_process^potassium ion transport",".","."]
["TRINITY_DN44373_c7_g2","leaves S. yangii","roots S. yangii",2.9762044946174,0,0,"TRINITY_DN44373_c7_g2_i3","CLPR1_ARATH^CLPR1_ARATH^Q:1548-505,H:30-374^71.71%ID^E:1e-154^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44373_c7_g2_i3.p1","454-1626[-]","CLPR1_ARATH^CLPR1_ARATH^Q:9-390,H:2-387^69.49%ID^E:0^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00574.20^CLP_protease^Clp protease^172-353^E:3.3e-36","sigP:1^21^0.455^YES",".","COG0740^Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)","KEGG:ath:AT1G49970`KO:K01358","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009840^cellular_component^chloroplastic endopeptidase Clp complex`GO:0009532^cellular_component^plastid stroma`GO:0004252^molecular_function^serine-type endopeptidase activity",".",".","."]
["TRINITY_DN46193_c5_g1","leaves S. yangii","roots S. yangii",2.96101056504991,0,0,"TRINITY_DN46193_c5_g1_i6","CH10C_ARATH^CH10C_ARATH^Q:863-1339,H:44-173^60.38%ID^E:3e-48^RecName: Full=20 kDa chaperonin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CH10C_ARATH^CH10C_ARATH^Q:1598-1840,H:169-249^75.31%ID^E:3e-30^RecName: Full=20 kDa chaperonin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CH10C_ARATH^CH10C_ARATH^Q:923-1276,H:160-252^32.77%ID^E:5e-09^RecName: Full=20 kDa chaperonin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46193_c5_g1_i6.p1","773-1105[+]","CH10C_ARATH^CH10C_ARATH^Q:31-106,H:44-117^68.42%ID^E:2e-26^RecName: Full=20 kDa chaperonin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CH10C_ARATH^CH10C_ARATH^Q:51-94,H:160-203^52.27%ID^E:4e-07^RecName: Full=20 kDa chaperonin, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00166.18^Cpn10^Chaperonin 10 Kd subunit^51-106^E:3e-15","sigP:1^24^0.554^YES",".","COG0234^Binds to cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (By similarity)","KEGG:ath:AT5G20720`KO:K04078","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0009579^cellular_component^thylakoid`GO:0005524^molecular_function^ATP binding`GO:0005507^molecular_function^copper ion binding`GO:1901671^biological_process^positive regulation of superoxide dismutase activity`GO:0006457^biological_process^protein folding`GO:0046686^biological_process^response to cadmium ion`GO:0009409^biological_process^response to cold","GO:0006457^biological_process^protein folding`GO:0005737^cellular_component^cytoplasm",".","."]
["TRINITY_DN43575_c1_g2","leaves S. yangii","roots S. yangii",2.95562192053887,0,0,"TRINITY_DN43575_c1_g2_i14","NUDT8_ARATH^NUDT8_ARATH^Q:1508-1894,H:226-294^41.09%ID^E:2e-22^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:1327-1416,H:200-229^60%ID^E:2e-22^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:2031-2246,H:294-365^61.11%ID^E:5e-21^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:849-989,H:157-204^70.83%ID^E:2e-14^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NUDT8_ARATH^NUDT8_ARATH^Q:458-706,H:70-156^56.18%ID^E:2e-10^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43575_c1_g2_i14.p1","332-748[+]","NUDT8_ARATH^NUDT8_ARATH^Q:43-125,H:70-156^56.18%ID^E:7e-24^RecName: Full=Nudix hydrolase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Z4GH^nudix (nucleoside diphosphate linked moiety X)-type motif 6","KEGG:ath:AT5G47240","GO:0016787^molecular_function^hydrolase activity`GO:0046872^molecular_function^metal ion binding`GO:0009611^biological_process^response to wounding",".",".","."]
["TRINITY_DN45196_c2_g2","leaves S. yangii","roots S. yangii",2.94744226343226,0,0,"TRINITY_DN45196_c2_g2_i3","NADK2_ARATH^NADK2_ARATH^Q:3246-208,H:4-985^61.52%ID^E:0^RecName: Full=NAD kinase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45196_c2_g2_i3.p1","1075-3288[-]","NADK2_ARATH^NADK2_ARATH^Q:15-737,H:4-701^49.26%ID^E:0^RecName: Full=NAD kinase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0061^Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0003951^molecular_function^NAD+ kinase activity`GO:0019674^biological_process^NAD metabolic process`GO:0006741^biological_process^NADP biosynthetic process",".",".","."]
["TRINITY_DN44509_c1_g3","leaves S. yangii","roots S. yangii",2.94735528251574,0,0,"TRINITY_DN44509_c1_g3_i2","P2A09_ARATH^P2A09_ARATH^Q:251-682,H:22-179^44.3%ID^E:7e-31^RecName: Full=Protein PHLOEM PROTEIN 2-LIKE A9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44509_c1_g3_i2.p1","185-691[+]","P2A09_ARATH^P2A09_ARATH^Q:1-166,H:1-179^41.67%ID^E:1e-34^RecName: Full=Protein PHLOEM PROTEIN 2-LIKE A9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14299.3^PP2^Phloem protein 2^23-165^E:2.9e-24",".",".","ENOG410YWN9^Protein PHLOEM PROTEIN 2-LIKE","KEGG:ath:AT1G31200","GO:0030246^molecular_function^carbohydrate binding",".",".","."]
["TRINITY_DN40996_c0_g1","leaves S. yangii","roots S. yangii",2.94533314004069,0,0,"TRINITY_DN40996_c0_g1_i4","K502_ACTDE^K502_ACTDE^Q:316-1134,H:68-313^47.84%ID^E:2e-75^RecName: Full=Fruit protein pKIWI502;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia",".","TRINITY_DN40996_c0_g1_i4.p1","181-867[+]","K502_ACTDE^K502_ACTDE^Q:1-224,H:1-249^45.82%ID^E:9e-63^RecName: Full=Fruit protein pKIWI502;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia","PF00175.18^NAD_binding_1^Oxidoreductase NAD-binding domain^171-212^E:0.00012",".",".",".",".","GO:0016491^molecular_function^oxidoreductase activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45841_c3_g1","leaves S. yangii","roots S. yangii",2.94490451037851,0,0,"TRINITY_DN45841_c3_g1_i3","IPYR1_ARATH^IPYR1_ARATH^Q:137-583,H:64-212^78.52%ID^E:2e-83^RecName: Full=Soluble inorganic pyrophosphatase 1 {ECO:0000303|PubMed:15135060};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45841_c3_g1_i3.p1","2-586[+]","IPYR1_ARATH^IPYR1_ARATH^Q:46-194,H:64-212^78.52%ID^E:7e-85^RecName: Full=Soluble inorganic pyrophosphatase 1 {ECO:0000303|PubMed:15135060};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00719.16^Pyrophosphatase^Inorganic pyrophosphatase^55-184^E:3.1e-43",".",".","COG0221^Pyrophosphate phospho-hydrolase","KEGG:ath:AT1G01050`KO:K01507","GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0019915^biological_process^lipid storage`GO:0006796^biological_process^phosphate-containing compound metabolic process","GO:0000287^molecular_function^magnesium ion binding`GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0006796^biological_process^phosphate-containing compound metabolic process`GO:0005737^cellular_component^cytoplasm",".","."]
["TRINITY_DN41670_c0_g1","leaves S. yangii","roots S. yangii",2.93878220016712,0,0,"TRINITY_DN41670_c0_g1_i5","PPOC_TOBAC^PPOC_TOBAC^Q:2894-1386,H:48-548^77.82%ID^E:0^RecName: Full=Protoporphyrinogen oxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN41670_c0_g1_i5.p1","1383-3014[-]","PPOC_TOBAC^PPOC_TOBAC^Q:10-543,H:1-548^72.91%ID^E:0^RecName: Full=Protoporphyrinogen oxidase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF13450.3^NAD_binding_8^NAD(P)-binding Rossmann-like domain^69-126^E:2e-10`PF01593.21^Amino_oxidase^Flavin containing amine oxidoreductase^74-528^E:1.5e-85",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0004729^molecular_function^oxygen-dependent protoporphyrinogen oxidase activity`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0006782^biological_process^protoporphyrinogen IX biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46487_c0_g1","leaves S. yangii","roots S. yangii",2.92560963915995,0,0,"TRINITY_DN46487_c0_g1_i9","LEU1B_SOLPN^LEU1B_SOLPN^Q:437-93,H:236-350^89.57%ID^E:4e-65^RecName: Full=2-isopropylmalate synthase B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN46487_c0_g1_i9.p1","90-437[-]","LEU1B_SOLPN^LEU1B_SOLPN^Q:1-115,H:236-350^89.57%ID^E:1e-65^RecName: Full=2-isopropylmalate synthase B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00682.16^HMGL-like^HMGL-like^1-115^E:8.1e-37",".",".",".",".","GO:0003852^molecular_function^2-isopropylmalate synthase activity`GO:0009098^biological_process^leucine biosynthetic process","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN45855_c4_g5","leaves S. yangii","roots S. yangii",2.92222267064238,0,0,"TRINITY_DN45855_c4_g5_i4","PPA4_ARATH^PPA4_ARATH^Q:360-1265,H:30-331^62.25%ID^E:9e-141^RecName: Full=Purple acid phosphatase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45855_c4_g5_i4.p1","294-1280[+]","PPA4_ARATH^PPA4_ARATH^Q:23-324,H:30-331^62.25%ID^E:2e-143^RecName: Full=Purple acid phosphatase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00149.25^Metallophos^Calcineurin-like phosphoesterase^41-249^E:8.9e-18","sigP:1^24^0.794^YES",".","COG1409^Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes (By similarity)","KEGG:ath:AT1G25230","GO:0005576^cellular_component^extracellular region`GO:0003993^molecular_function^acid phosphatase activity`GO:0046872^molecular_function^metal ion binding","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN46682_c5_g1","leaves S. yangii","roots S. yangii",2.90304968736558,0,0,"TRINITY_DN46682_c5_g1_i6","CUT1C_ARATH^CUT1C_ARATH^Q:848-420,H:1-156^53.16%ID^E:4e-39^RecName: Full=Protein CURVATURE THYLAKOID 1C, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46682_c5_g1_i6.p1","417-941[-]","CUT1C_ARATH^CUT1C_ARATH^Q:32-174,H:1-156^53.16%ID^E:9e-51^RecName: Full=Protein CURVATURE THYLAKOID 1C, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14159.3^CAAD^CAAD domains of cyanobacterial aminoacyl-tRNA synthetase^90-173^E:8.6e-30",".",".","ENOG4112195^Thylakoid membrane phosphoprotein 14 kDa","KEGG:ath:AT1G52220","GO:0009507^cellular_component^chloroplast`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN45861_c2_g2","leaves S. yangii","roots S. yangii",2.89300761855938,0,0,"TRINITY_DN45861_c2_g2_i14","AOX4_ARATH^AOX4_ARATH^Q:944-558,H:219-349^74.05%ID^E:1e-59^RecName: Full=Ubiquinol oxidase 4, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AOX4_ARATH^AOX4_ARATH^Q:1521-1297,H:145-219^92%ID^E:1e-39^RecName: Full=Ubiquinol oxidase 4, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AOX4_ARATH^AOX4_ARATH^Q:2177-1869,H:54-151^61.17%ID^E:7e-24^RecName: Full=Ubiquinol oxidase 4, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45861_c2_g2_i14.p1","1860-2342[-]","AOX4_ARATH^AOX4_ARATH^Q:56-158,H:54-151^59.81%ID^E:1e-29^RecName: Full=Ubiquinol oxidase 4, chloroplastic/chromoplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YEK7^Ubiquinol oxidase","KEGG:ath:AT4G22260`KO:K17893","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0046862^cellular_component^chromoplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0070469^cellular_component^respiratory chain`GO:0009579^cellular_component^thylakoid`GO:0009916^molecular_function^alternative oxidase activity`GO:0046872^molecular_function^metal ion binding`GO:0016117^biological_process^carotenoid biosynthetic process`GO:0009657^biological_process^plastid organization",".",".","."]
["TRINITY_DN44502_c4_g2","leaves S. yangii","roots S. yangii",2.88873856548333,0,0,"TRINITY_DN44502_c4_g2_i1","STP13_ARATH^STP13_ARATH^Q:1919-1083,H:14-293^86.07%ID^E:0^RecName: Full=Sugar transport protein 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`STP13_ARATH^STP13_ARATH^Q:1002-307,H:291-526^77.54%ID^E:0^RecName: Full=Sugar transport protein 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44502_c4_g2_i1.p1","1020-1958[-]","STP13_ARATH^STP13_ARATH^Q:1-292,H:1-293^84.98%ID^E:4e-173^RecName: Full=Sugar transport protein 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^27-292^E:4.3e-62`PF07690.13^MFS_1^Major Facilitator Superfamily^55-298^E:4.3e-16",".",".","ENOG410XNQK^Transporter","KEGG:ath:AT5G26340","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0009679^molecular_function^hexose:proton symporter activity`GO:0005358^molecular_function^high-affinity hydrogen:glucose symporter activity`GO:0015145^molecular_function^monosaccharide transmembrane transporter activity`GO:0046323^biological_process^glucose import`GO:1904659^biological_process^glucose transmembrane transport`GO:0035428^biological_process^hexose transmembrane transport`GO:0015749^biological_process^monosaccharide transport`GO:0009737^biological_process^response to abscisic acid`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46089_c2_g2","leaves S. yangii","roots S. yangii",2.8750332562573,0,0,"TRINITY_DN46089_c2_g2_i4","KPYG_TOBAC^KPYG_TOBAC^Q:1121-336,H:85-346^90.46%ID^E:1e-167^RecName: Full=Pyruvate kinase isozyme G, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46089_c2_g2_i4.p1","264-1385[-]","KPYG_TOBAC^KPYG_TOBAC^Q:89-350,H:85-346^90.46%ID^E:2e-170^RecName: Full=Pyruvate kinase isozyme G, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00224.18^PK^Pyruvate kinase, barrel domain^95-351^E:1.7e-78",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0030955^molecular_function^potassium ion binding`GO:0004743^molecular_function^pyruvate kinase activity","GO:0000287^molecular_function^magnesium ion binding`GO:0004743^molecular_function^pyruvate kinase activity`GO:0030955^molecular_function^potassium ion binding`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN46280_c6_g1","leaves S. yangii","roots S. yangii",2.87459694522667,0,0,"TRINITY_DN46280_c6_g1_i13","CYSP_PEA^CYSP_PEA^Q:1443-1057,H:26-150^65.12%ID^E:7e-45^RecName: Full=Cysteine proteinase 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN46280_c6_g1_i13.p1","994-1551[-]","RD19A_ARATH^RD19A_ARATH^Q:36-165,H:28-153^63.08%ID^E:3e-49^RecName: Full=Cysteine proteinase RD19a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^62-118^E:2.4e-12","sigP:1^26^0.891^YES",".","COG4870^cathepsin","KEGG:ath:AT4G39090`KO:K01373","GO:0005615^cellular_component^extracellular space`GO:0005764^cellular_component^lysosome`GO:0005634^cellular_component^nucleus`GO:0005773^cellular_component^vacuole`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0042742^biological_process^defense response to bacterium`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process`GO:0006970^biological_process^response to osmotic stress`GO:0009651^biological_process^response to salt stress",".",".","."]
["TRINITY_DN45404_c3_g2","leaves S. yangii","roots S. yangii",2.86882631437037,0,0,"TRINITY_DN45404_c3_g2_i7","MAP1D_ARATH^MAP1D_ARATH^Q:690-277,H:1-135^63.77%ID^E:2e-49^RecName: Full=Methionine aminopeptidase 1D, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03174};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45404_c3_g2_i7.p1","196-690[-]","MAP1D_ARATH^MAP1D_ARATH^Q:1-138,H:1-135^63.77%ID^E:1e-50^RecName: Full=Methionine aminopeptidase 1D, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03174};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0024^Removes the N-terminal methionine from nascent proteins (By similarity)","KEGG:ath:AT4G37040`KO:K01265","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0004177^molecular_function^aminopeptidase activity`GO:0046872^molecular_function^metal ion binding`GO:0008235^molecular_function^metalloexopeptidase activity`GO:0031365^biological_process^N-terminal protein amino acid modification`GO:0009737^biological_process^response to abscisic acid",".",".","."]
["TRINITY_DN46223_c5_g4","leaves S. yangii","roots S. yangii",2.8654888100485,0,0,"TRINITY_DN46223_c5_g4_i12","PPH_ARATH^PPH_ARATH^Q:1256-2074,H:13-285^53.6%ID^E:1e-140^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPH_ARATH^PPH_ARATH^Q:2160-2750,H:286-483^60.1%ID^E:1e-140^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46223_c5_g4_i12.p1","1142-2077[+]","PPH_ARATH^PPH_ARATH^Q:39-311,H:13-285^53.6%ID^E:3e-94^RecName: Full=Pheophytinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00561.17^Abhydrolase_1^alpha/beta hydrolase fold^141-274^E:2.6e-11`PF12697.4^Abhydrolase_6^Alpha/beta hydrolase family^143-296^E:1.8e-12",".",".","COG0596^Alpha beta hydrolase","KEGG:ath:AT5G13800","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0080124^molecular_function^pheophytinase activity`GO:0015996^biological_process^chlorophyll catabolic process",".",".","."]
["TRINITY_DN43800_c5_g4","leaves S. yangii","roots S. yangii",2.86486166216043,0,0,"TRINITY_DN43800_c5_g4_i1","TKTC_CRAPL^TKTC_CRAPL^Q:2-730,H:277-519^92.59%ID^E:1e-156^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Linderniaceae; Craterostigma",".","TRINITY_DN43800_c5_g4_i1.p1","2-733[+]","TKTC_CRAPL^TKTC_CRAPL^Q:1-243,H:277-519^92.59%ID^E:2e-158^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Linderniaceae; Craterostigma","PF02779.21^Transket_pyr^Transketolase, pyrimidine binding domain^1-104^E:4.6e-27`PF02780.17^Transketolase_C^Transketolase, C-terminal domain^129-235^E:4.6e-13",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0046872^molecular_function^metal ion binding`GO:0004802^molecular_function^transketolase activity",".",".","."]
["TRINITY_DN40029_c0_g1","leaves S. yangii","roots S. yangii",2.81633050135049,0,0,"TRINITY_DN40029_c0_g1_i3","LGUC_ARATH^LGUC_ARATH^Q:1208-1783,H:158-350^87.56%ID^E:5e-111^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LGUC_ARATH^LGUC_ARATH^Q:131-484,H:1-107^49.58%ID^E:1e-49^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LGUC_ARATH^LGUC_ARATH^Q:570-698,H:104-146^93.02%ID^E:1e-49^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LGUC_ARATH^LGUC_ARATH^Q:814-909,H:139-170^65.62%ID^E:1e-49^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LGUC_ARATH^LGUC_ARATH^Q:1388-1741,H:89-206^55.93%ID^E:6e-33^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LGUC_ARATH^LGUC_ARATH^Q:534-698,H:217-276^50%ID^E:1e-06^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40029_c0_g1_i3.p1","1400-1786[+]","LGUC_ARATH^LGUC_ARATH^Q:1-128,H:223-350^91.41%ID^E:6e-80^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LGUC_ARATH^LGUC_ARATH^Q:3-114,H:95-206^58.93%ID^E:9e-37^RecName: Full=Probable lactoylglutathione lyase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00903.22^Glyoxalase^Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily^2-114^E:2.2e-13`PF13176.3^TPR_7^Tetratricopeptide repeat^3-21^E:0.032`PF13181.3^TPR_8^Tetratricopeptide repeat^5-20^E:0.13",".",".","COG0346^glyoxalase bleomycin resistance protein dioxygenase","KEGG:ath:AT1G67280`KO:K01759","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0010319^cellular_component^stromule`GO:0009579^cellular_component^thylakoid`GO:0031977^cellular_component^thylakoid lumen`GO:0004462^molecular_function^lactoylglutathione lyase activity`GO:0046872^molecular_function^metal ion binding`GO:0009409^biological_process^response to cold","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46596_c0_g17","leaves S. yangii","roots S. yangii",2.81565586739786,0,0,"TRINITY_DN46596_c0_g17_i1","DTC_ARATH^DTC_ARATH^Q:1238-363,H:1-292^86.64%ID^E:1e-175^RecName: Full=Mitochondrial dicarboxylate/tricarboxylate transporter DTC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46596_c0_g17_i1.p1","342-1238[-]","DTC_ARATH^DTC_ARATH^Q:1-298,H:1-298^85.91%ID^E:0^RecName: Full=Mitochondrial dicarboxylate/tricarboxylate transporter DTC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00153.24^Mito_carr^Mitochondrial carrier protein^14-89^E:2e-14`PF00153.24^Mito_carr^Mitochondrial carrier protein^102-194^E:1.6e-18`PF00153.24^Mito_carr^Mitochondrial carrier protein^209-292^E:1.3e-12",".",".","ENOG410XQHU^Mitochondrial","KEGG:ath:AT5G19760`KO:K15104","GO:0005618^cellular_component^cell wall`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion`GO:0009506^cellular_component^plasmodesma`GO:0005774^cellular_component^vacuolar membrane`GO:0005310^molecular_function^dicarboxylic acid transmembrane transporter activity`GO:0015142^molecular_function^tricarboxylic acid transmembrane transporter activity`GO:0006835^biological_process^dicarboxylic acid transport`GO:0035674^biological_process^tricarboxylic acid transmembrane transport",".",".","."]
["TRINITY_DN46728_c4_g2","leaves S. yangii","roots S. yangii",2.81313014677484,0,0,"TRINITY_DN46728_c4_g2_i2","SSY2_SOLTU^SSY2_SOLTU^Q:1171-2784,H:230-767^83.27%ID^E:0^RecName: Full=Granule-bound starch synthase 2, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46728_c4_g2_i2.p1","1015-2787[+]","SSY2_SOLTU^SSY2_SOLTU^Q:53-590,H:230-767^83.27%ID^E:0^RecName: Full=Granule-bound starch synthase 2, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF08323.8^Glyco_transf_5^Starch synthase catalytic domain^100-342^E:4.9e-65`PF00534.17^Glycos_transf_1^Glycosyl transferases group 1^401-542^E:8.8e-17`PF13692.3^Glyco_trans_1_4^Glycosyl transferases group 1^405-544^E:1.4e-15",".",".","COG0297^starch synthase activity","KEGG:sot:102583115`KO:K00703","GO:0009501^cellular_component^amyloplast`GO:0009507^cellular_component^chloroplast`GO:0033201^molecular_function^alpha-1,4-glucan synthase activity`GO:0004373^molecular_function^glycogen (starch) synthase activity`GO:0009011^molecular_function^starch synthase activity`GO:0010021^biological_process^amylopectin biosynthetic process`GO:0019375^biological_process^galactolipid biosynthetic process`GO:0010264^biological_process^myo-inositol hexakisphosphate biosynthetic process`GO:0001666^biological_process^response to hypoxia`GO:0019252^biological_process^starch biosynthetic process",".",".","."]
["TRINITY_DN38161_c0_g1","leaves S. yangii","roots S. yangii",2.80533684093916,0,0,"TRINITY_DN38161_c0_g1_i3","CLPR2_ARATH^CLPR2_ARATH^Q:86-940,H:1-279^72.98%ID^E:7e-151^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38161_c0_g1_i3.p1","86-943[+]","CLPR2_ARATH^CLPR2_ARATH^Q:1-285,H:1-279^72.98%ID^E:3e-152^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00574.20^CLP_protease^Clp protease^92-267^E:6.6e-63",".",".","COG0740^Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)","KEGG:ath:AT1G12410`KO:K01358","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009840^cellular_component^chloroplastic endopeptidase Clp complex`GO:0010287^cellular_component^plastoglobule`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0009658^biological_process^chloroplast organization",".",".","."]
["TRINITY_DN40972_c0_g1","leaves S. yangii","roots S. yangii",2.80499652123026,0,0,"TRINITY_DN40972_c0_g1_i6","ERG1_PANGI^ERG1_PANGI^Q:1383-283,H:175-537^80.38%ID^E:0^RecName: Full=Squalene monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN40972_c0_g1_i6.p1","274-969[-]","ERG1_PANGI^ERG1_PANGI^Q:1-229,H:309-537^85.15%ID^E:4e-141^RecName: Full=Squalene monooxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF08491.7^SE^Squalene epoxidase^1-187^E:6.7e-78",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0004506^molecular_function^squalene monooxygenase activity","GO:0004506^molecular_function^squalene monooxygenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46697_c0_g6","leaves S. yangii","roots S. yangii",2.80141084010818,0,0,"TRINITY_DN46697_c0_g6_i2","PDR2_NICPL^PDR2_NICPL^Q:2-454,H:1311-1461^82.78%ID^E:1e-67^RecName: Full=Pleiotropic drug resistance protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46697_c0_g6_i2.p1","2-457[+]","PDR2_NICPL^PDR2_NICPL^Q:1-151,H:1311-1461^82.78%ID^E:3e-75^RecName: Full=Pleiotropic drug resistance protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01061.21^ABC2_membrane^ABC-2 type transporter^3-87^E:6e-19",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN41571_c0_g1","leaves S. yangii","roots S. yangii",2.78791715579724,0,0,"TRINITY_DN41571_c0_g1_i2","ISPF_CATRO^ISPF_CATRO^Q:393-902,H:67-236^90%ID^E:1e-105^RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus",".","TRINITY_DN41571_c0_g1_i2.p1","192-905[+]","ISPF_CATRO^ISPF_CATRO^Q:1-237,H:1-236^71.78%ID^E:2e-110^RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF02542.13^YgbB^YgbB family^81-234^E:4.4e-61",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0008685^molecular_function^2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity`GO:0046872^molecular_function^metal ion binding`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0008685^molecular_function^2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process",".","."]
["TRINITY_DN35318_c0_g1","leaves S. yangii","roots S. yangii",2.78438783889844,0,0,"TRINITY_DN35318_c0_g1_i1","AB8I_ARATH^AB8I_ARATH^Q:198-1631,H:1-486^77.16%ID^E:0^RecName: Full=UPF0051 protein ABCI8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB8I_ARATH^AB8I_ARATH^Q:2282-2500,H:485-557^87.67%ID^E:3e-34^RecName: Full=UPF0051 protein ABCI8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35318_c0_g1_i1.p1","198-1661[+]","AB8I_ARATH^AB8I_ARATH^Q:1-478,H:1-486^77.16%ID^E:0^RecName: Full=UPF0051 protein ABCI8, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01458.14^UPF0051^Uncharacterized protein family (UPF0051)^287-479^E:4.2e-47",".",".","COG0719^Fe-S assembly protein","KEGG:ath:AT4G04770`KO:K07033","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0005215^molecular_function^transporter activity`GO:0006879^biological_process^cellular iron ion homeostasis`GO:0016226^biological_process^iron-sulfur cluster assembly`GO:2000030^biological_process^regulation of response to red or far red light`GO:0055085^biological_process^transmembrane transport`GO:0006810^biological_process^transport","GO:0016226^biological_process^iron-sulfur cluster assembly",".","."]
["TRINITY_DN45138_c0_g2","leaves S. yangii","roots S. yangii",2.78082100426677,0,0,"TRINITY_DN45138_c0_g2_i5","BBD1_ARATH^BBD1_ARATH^Q:269-838,H:1-189^63.87%ID^E:4e-63^RecName: Full=Bifunctional nuclease 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45138_c0_g2_i5.p1","269-847[+]","BBD2_ARATH^BBD2_ARATH^Q:1-190,H:1-193^64.25%ID^E:1e-78^RecName: Full=Bifunctional nuclease 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02577.11^DNase-RNase^Bifunctional nuclease^134-190^E:8.4e-05",".",".","ENOG4110AP6^Bifunctional nuclease with both RNase and DNase activites. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen","KEGG:ath:AT1G19660","GO:0005634^cellular_component^nucleus`GO:0004518^molecular_function^nuclease activity","GO:0004518^molecular_function^nuclease activity",".","."]
["TRINITY_DN45424_c4_g1","leaves S. yangii","roots S. yangii",2.77239830141839,0,0,"TRINITY_DN45424_c4_g1_i7","WNK4_ARATH^WNK4_ARATH^Q:138-1421,H:5-404^65.97%ID^E:0^RecName: Full=Probable serine/threonine-protein kinase WNK4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WNK4_ARATH^WNK4_ARATH^Q:2201-2353,H:517-567^62.75%ID^E:3e-09^RecName: Full=Probable serine/threonine-protein kinase WNK4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45424_c4_g1_i7.p2","1026-1595[+]","WNK4_ARATH^WNK4_ARATH^Q:1-132,H:272-404^55.15%ID^E:7e-34^RecName: Full=Probable serine/threonine-protein kinase WNK4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XQWZ^WNK lysine deficient protein kinase","KEGG:ath:AT5G58350`KO:K08867","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0046777^biological_process^protein autophosphorylation`GO:0006468^biological_process^protein phosphorylation",".",".","."]
["TRINITY_DN43441_c3_g1","leaves S. yangii","roots S. yangii",2.74405241504831,0,0,"TRINITY_DN43441_c3_g1_i17","FTSHB_ARATH^FTSHB_ARATH^Q:1763-2827,H:356-710^93.24%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FTSHB_ARATH^FTSHB_ARATH^Q:519-1211,H:60-315^57.59%ID^E:1e-78^RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FTSHB_ARATH^FTSHB_ARATH^Q:3002-3196,H:710-748^52.31%ID^E:8e-08^RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FTSHB_ARATH^FTSHB_ARATH^Q:3487-3591,H:751-786^80.56%ID^E:6e-06^RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43441_c3_g1_i17.p2","1997-2866[+]","FTSHB_ARATH^FTSHB_ARATH^Q:1-277,H:434-710^92.78%ID^E:0^RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^2-93^E:8.6e-26`PF01434.15^Peptidase_M41^Peptidase family M41^155-277^E:7.3e-51",".",".","COG0465^Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)","KEGG:ath:AT5G53170","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0005524^molecular_function^ATP binding`GO:0004176^molecular_function^ATP-dependent peptidase activity`GO:0046872^molecular_function^metal ion binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008237^molecular_function^metallopeptidase activity`GO:0006508^biological_process^proteolysis`GO:0010304^biological_process^PSII associated light-harvesting complex II catabolic process`GO:0009408^biological_process^response to heat","GO:0005524^molecular_function^ATP binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46024_c0_g2","leaves S. yangii","roots S. yangii",2.74341888825543,0,0,"TRINITY_DN46024_c0_g2_i1","C71DF_MENPI^C71DF_MENPI^Q:163-1656,H:1-494^60.24%ID^E:0^RecName: Full=Cytochrome P450 71D15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN46024_c0_g2_i1.p1","1-1662[+]","C71DF_MENPI^C71DF_MENPI^Q:55-552,H:1-494^60.24%ID^E:0^RecName: Full=Cytochrome P450 71D15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF00067.19^p450^Cytochrome P450^94-527^E:1.7e-99",".",".",".","KEGG:ag:AAD44152`KO:K15089","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0018674^molecular_function^(S)-limonene 3-monooxygenase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0055114^biological_process^oxidation-reduction process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45325_c1_g8","leaves S. yangii","roots S. yangii",2.72410044639127,0,0,"TRINITY_DN45325_c1_g8_i4","CLPS1_ARATH^CLPS1_ARATH^Q:1381-1641,H:73-159^83.91%ID^E:2e-45^RecName: Full=ATP-dependent Clp protease adapter protein CLPS1, chloroplastic {ECO:0000303|Ref.6};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45325_c1_g8_i4.p1","1345-1644[+]","CLPS1_ARATH^CLPS1_ARATH^Q:13-99,H:73-159^83.91%ID^E:7e-51^RecName: Full=ATP-dependent Clp protease adapter protein CLPS1, chloroplastic {ECO:0000303|Ref.6};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02617.14^ClpS^ATP-dependent Clp protease adaptor protein ClpS^19-85^E:2.8e-19",".",".","COG2127^protein catabolic process","KO:K06891","GO:0009570^cellular_component^chloroplast stroma`GO:0005840^cellular_component^ribosome`GO:0008233^molecular_function^peptidase activity`GO:0030163^biological_process^protein catabolic process","GO:0030163^biological_process^protein catabolic process",".","."]
["TRINITY_DN46126_c1_g4","leaves S. yangii","roots S. yangii",2.72072824478813,0,0,"TRINITY_DN46126_c1_g4_i6","FAD6C_SOYBN^FAD6C_SOYBN^Q:3032-2091,H:1-311^68.79%ID^E:2e-138^RecName: Full=Omega-6 fatty acid desaturase, chloroplastic {ECO:0000303|PubMed:8066133};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja`FAD6C_SOYBN^FAD6C_SOYBN^Q:741-547,H:351-415^87.69%ID^E:8e-30^RecName: Full=Omega-6 fatty acid desaturase, chloroplastic {ECO:0000303|PubMed:8066133};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja`FAD6C_SOYBN^FAD6C_SOYBN^Q:1016-891,H:309-350^85.71%ID^E:8e-15^RecName: Full=Omega-6 fatty acid desaturase, chloroplastic {ECO:0000303|PubMed:8066133};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46126_c1_g4_i6.p1","2043-3032[-]","FAD6C_SOYBN^FAD6C_SOYBN^Q:1-314,H:1-311^70.38%ID^E:6e-157^RecName: Full=Omega-6 fatty acid desaturase, chloroplastic {ECO:0000303|PubMed:8066133};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00487.21^FA_desaturase^Fatty acid desaturase^146-314^E:2.5e-14",".",".","COG3239^linoleoyl-CoA desaturase activity","KEGG:gmx:547807`KO:K10255","GO:0031969^cellular_component^chloroplast membrane`GO:0016491^molecular_function^oxidoreductase activity`GO:0006636^biological_process^unsaturated fatty acid biosynthetic process","GO:0006629^biological_process^lipid metabolic process",".","."]
["TRINITY_DN43800_c5_g1","leaves S. yangii","roots S. yangii",2.70677061469394,0,0,"TRINITY_DN43800_c5_g1_i1","TKTC_SOLTU^TKTC_SOLTU^Q:114-776,H:226-446^90.5%ID^E:6e-143^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN43800_c5_g1_i1.p1","147-776[+]","TKTC_CRAPL^TKTC_CRAPL^Q:1-210,H:15-224^87.14%ID^E:6e-136^RecName: Full=Transketolase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Linderniaceae; Craterostigma","PF00456.18^Transketolase_N^Transketolase, thiamine diphosphate binding domain^1-178^E:9.9e-68",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0046872^molecular_function^metal ion binding`GO:0004802^molecular_function^transketolase activity",".",".","."]
["TRINITY_DN41993_c0_g1","leaves S. yangii","roots S. yangii",2.68835771995688,0,0,"TRINITY_DN41993_c0_g1_i1","XERIC_ARATH^XERIC_ARATH^Q:184-321,H:101-146^50%ID^E:1e-09^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41993_c0_g1_i1.p1","1-435[+]","XERIC_ARATH^XERIC_ARATH^Q:62-110,H:101-149^46.94%ID^E:1e-10^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^62-106^E:4.4e-14`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^62-106^E:2.2e-07`PF17123.2^zf-RING_11^RING-like zinc finger^63-90^E:8.8e-09`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^63-105^E:1.3e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^64-105^E:1.6e-06",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT2G04240`KO:K16285","GO:0016021^cellular_component^integral component of membrane`GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009688^biological_process^abscisic acid biosynthetic process`GO:0009687^biological_process^abscisic acid metabolic process`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin`GO:0009739^biological_process^response to gibberellin`GO:0006970^biological_process^response to osmotic stress`GO:0009651^biological_process^response to salt stress","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN42262_c0_g1","leaves S. yangii","roots S. yangii",2.66225848653532,0,0,"TRINITY_DN42262_c0_g1_i7","AGAL1_ARATH^AGAL1_ARATH^Q:378-1142,H:42-296^83.53%ID^E:6e-157^RecName: Full=Alpha-galactosidase 1 {ECO:0000303|PubMed:15034167};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42262_c0_g1_i7.p1","291-1145[+]","AGAL1_ARATH^AGAL1_ARATH^Q:24-284,H:36-296^81.99%ID^E:1e-160^RecName: Full=Alpha-galactosidase 1 {ECO:0000303|PubMed:15034167};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16499.2^Melibiase_2^Alpha galactosidase A^41-273^E:7.6e-71`PF02065.15^Melibiase^Melibiase^41-127^E:5.5e-06","sigP:1^25^0.911^YES",".","ENOG410XPF1^alpha-galactosidase","KEGG:ath:AT5G08380`KO:K07407","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0009505^cellular_component^plant-type cell wall`GO:0052692^molecular_function^raffinose alpha-galactosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process`GO:0004557^molecular_function^alpha-galactosidase activity",".","."]
["TRINITY_DN44653_c4_g1","leaves S. yangii","roots S. yangii",2.63549922629236,0,0,"TRINITY_DN44653_c4_g1_i5","PCKA_CUCSA^PCKA_CUCSA^Q:2860-1358,H:8-512^82.84%ID^E:0^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis`PCKA_CUCSA^PCKA_CUCSA^Q:683-297,H:572-670^54.26%ID^E:8e-20^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis`PCKA_CUCSA^PCKA_CUCSA^Q:1289-1137,H:511-561^84.31%ID^E:1e-19^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN44653_c4_g1_i5.p1","1301-2869[-]","PCKA_CUCSA^PCKA_CUCSA^Q:4-504,H:8-512^82.84%ID^E:0^RecName: Full=Phosphoenolpyruvate carboxykinase [ATP];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF01293.17^PEPCK_ATP^Phosphoenolpyruvate carboxykinase^142-505^E:2.4e-161",".",".",".","KEGG:csv:101222382`KO:K01610","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0004612^molecular_function^phosphoenolpyruvate carboxykinase (ATP) activity`GO:0006094^biological_process^gluconeogenesis","GO:0004612^molecular_function^phosphoenolpyruvate carboxykinase (ATP) activity`GO:0005524^molecular_function^ATP binding`GO:0006094^biological_process^gluconeogenesis",".","."]
["TRINITY_DN45898_c1_g3","leaves S. yangii","roots S. yangii",2.6244209218319,0,0,"TRINITY_DN45898_c1_g3_i35","Y5126_ARATH^Y5126_ARATH^Q:5714-5277,H:1-146^69.18%ID^E:4e-55^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5126_ARATH^Y5126_ARATH^Q:1995-1642,H:255-372^74.58%ID^E:2e-49^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5126_ARATH^Y5126_ARATH^Q:939-589,H:369-485^75.21%ID^E:7e-49^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5126_ARATH^Y5126_ARATH^Q:4834-4580,H:143-227^85.88%ID^E:3e-40^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5126_ARATH^Y5126_ARATH^Q:3298-3209,H:227-256^96.67%ID^E:2e-08^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45898_c1_g3_i35.p1","5256-5714[-]","Y5126_ARATH^Y5126_ARATH^Q:1-146,H:1-146^69.18%ID^E:3e-65^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^72-144^E:5.2e-09",".",".","ENOG410XQTV^serine threonine-protein kinase","KEGG:ath:AT5G41260`KO:K14500","GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47480_c0_g1","leaves S. yangii","roots S. yangii",2.60762609517262,0,0,"TRINITY_DN47480_c0_g1_i16","IMPL1_ARATH^IMPL1_ARATH^Q:2039-1224,H:100-371^85.66%ID^E:3e-159^RecName: Full=Phosphatase IMPL1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47480_c0_g1_i16.p1","1221-2030[-]","IMPL1_ARATH^IMPL1_ARATH^Q:1-269,H:103-371^86.25%ID^E:6e-175^RecName: Full=Phosphatase IMPL1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00459.22^Inositol_P^Inositol monophosphatase family^6-241^E:2.6e-65",".",".","COG0483^inositol monophosphatase","KEGG:ath:AT1G31190`KO:K01092","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0008934^molecular_function^inositol monophosphate 1-phosphatase activity`GO:0052832^molecular_function^inositol monophosphate 3-phosphatase activity`GO:0052833^molecular_function^inositol monophosphate 4-phosphatase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0006021^biological_process^inositol biosynthetic process`GO:0006020^biological_process^inositol metabolic process`GO:0046855^biological_process^inositol phosphate dephosphorylation`GO:0046854^biological_process^phosphatidylinositol phosphorylation`GO:0007165^biological_process^signal transduction","GO:0046854^biological_process^phosphatidylinositol phosphorylation",".","."]
["TRINITY_DN32237_c0_g1","leaves S. yangii","roots S. yangii",2.60337623641964,"0.000196434682631807","0.000293488408366245","TRINITY_DN32237_c0_g1_i1","PERN1_TOBAC^PERN1_TOBAC^Q:6-659,H:112-330^73.97%ID^E:3e-112^RecName: Full=Peroxidase N1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN32237_c0_g1_i1.p1","3-662[+]","PERN1_TOBAC^PERN1_TOBAC^Q:2-219,H:112-330^73.97%ID^E:4e-113^RecName: Full=Peroxidase N1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00141.20^peroxidase^Peroxidase^2-176^E:1.3e-48",".",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN28412_c0_g1","leaves S. yangii","roots S. yangii",2.60319444502588,0,0,"TRINITY_DN28412_c0_g1_i1","MINE1_ARATH^MINE1_ARATH^Q:934-254,H:1-228^59.57%ID^E:8e-80^RecName: Full=Cell division topological specificity factor homolog, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28412_c0_g1_i1.p1","230-934[-]","MINE1_ARATH^MINE1_ARATH^Q:1-227,H:1-228^59.57%ID^E:2e-82^RecName: Full=Cell division topological specificity factor homolog, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03776.11^MinE^Septum formation topological specificity factor MinE^121-188^E:2.1e-13",".",".","ENOG41122SR^Septum formation topological specificity factor MinE","KEGG:ath:AT1G69390","GO:0009507^cellular_component^chloroplast`GO:0051117^molecular_function^ATPase binding`GO:0042802^molecular_function^identical protein binding`GO:0051301^biological_process^cell division`GO:0010020^biological_process^chloroplast fission`GO:0032955^biological_process^regulation of barrier septum assembly","GO:0032955^biological_process^regulation of barrier septum assembly`GO:0051301^biological_process^cell division",".","."]
["TRINITY_DN46054_c1_g2","leaves S. yangii","roots S. yangii",2.584543176838,0,0,"TRINITY_DN46054_c1_g2_i6","FTZ22_ARATH^FTZ22_ARATH^Q:1860-928,H:1-308^67.51%ID^E:2e-96^RecName: Full=Cell division protein FtsZ homolog 2-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FTZ22_ARATH^FTZ22_ARATH^Q:683-186,H:305-472^84.21%ID^E:7e-85^RecName: Full=Cell division protein FtsZ homolog 2-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46054_c1_g2_i6.p1","895-1860[-]","FTZ22_ARATH^FTZ22_ARATH^Q:1-311,H:1-308^69.16%ID^E:3e-126^RecName: Full=Cell division protein FtsZ homolog 2-2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00091.22^Tubulin^Tubulin/FtsZ family, GTPase domain^119-280^E:4e-39",".",".","COG0206^Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (By similarity)","KEGG:ath:AT3G52750`KO:K03531","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016020^cellular_component^membrane`GO:0009532^cellular_component^plastid stroma`GO:0042651^cellular_component^thylakoid membrane`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0042802^molecular_function^identical protein binding`GO:0043621^molecular_function^protein self-association`GO:0010020^biological_process^chloroplast fission`GO:0009658^biological_process^chloroplast organization","GO:0003924^molecular_function^GTPase activity",".","."]
["TRINITY_DN45615_c2_g1","leaves S. yangii","roots S. yangii",2.58131173374838,0,0,"TRINITY_DN45615_c2_g1_i8","CAHC_TOBAC^CAHC_TOBAC^Q:1221-592,H:62-267^68.1%ID^E:5e-94^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`CAHC_TOBAC^CAHC_TOBAC^Q:554-396,H:268-320^73.58%ID^E:5e-94^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45615_c2_g1_i8.p1","583-1245[-]","CAHC_TOBAC^CAHC_TOBAC^Q:9-218,H:62-267^68.1%ID^E:8e-96^RecName: Full=Carbonic anhydrase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00484.16^Pro_CA^Carbonic anhydrase^99-206^E:4.5e-32",".",".",".",".","GO:0009570^cellular_component^chloroplast stroma`GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015976^biological_process^carbon utilization","GO:0004089^molecular_function^carbonate dehydratase activity`GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN40488_c0_g1","leaves S. yangii","roots S. yangii",2.57642390724411,0,0,"TRINITY_DN40488_c0_g1_i2","SEBP1_ARATH^SEBP1_ARATH^Q:1046-1960,H:186-490^81.31%ID^E:2e-180^RecName: Full=Selenium-binding protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SEBP1_ARATH^SEBP1_ARATH^Q:250-813,H:1-193^73.06%ID^E:9e-92^RecName: Full=Selenium-binding protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40488_c0_g1_i2.p1","1136-1963[+]","SEBP1_ARATH^SEBP1_ARATH^Q:1-275,H:216-490^81.09%ID^E:2e-167^RecName: Full=Selenium-binding protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05694.8^SBP56^56kDa selenium binding protein (SBP56)^1-275^E:1.2e-122",".",".","ENOG410XP4F^selenium-binding protein","KEGG:ath:AT4G14030`KO:K17285","GO:0005829^cellular_component^cytosol`GO:0009506^cellular_component^plasmodesma`GO:0008430^molecular_function^selenium binding`GO:0071291^biological_process^cellular response to selenium ion`GO:0046686^biological_process^response to cadmium ion`GO:0042542^biological_process^response to hydrogen peroxide`GO:0000103^biological_process^sulfate assimilation","GO:0008430^molecular_function^selenium binding",".","."]
["TRINITY_DN43806_c3_g1","leaves S. yangii","roots S. yangii",2.53278697595406,0,0,"TRINITY_DN43806_c3_g1_i3","GGAP2_ARATH^GGAP2_ARATH^Q:2957-1773,H:1-392^77.19%ID^E:0^RecName: Full=GDP-L-galactose phosphorylase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43806_c3_g1_i3.p1","1647-2957[-]","GGAP2_ARATH^GGAP2_ARATH^Q:1-395,H:1-392^77.19%ID^E:0^RecName: Full=GDP-L-galactose phosphorylase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111FR6^GDP-D-glucose phosphorylase","KEGG:ath:AT5G55120`KO:K14190","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0010475^molecular_function^galactose-1-phosphate guanylyltransferase (GDP) activity`GO:0080048^molecular_function^GDP-D-glucose phosphorylase activity`GO:0005085^molecular_function^guanyl-nucleotide exchange factor activity`GO:0016787^molecular_function^hydrolase activity`GO:0000166^molecular_function^nucleotide binding`GO:0080046^molecular_function^quercetin 4'-O-glucosyltransferase activity`GO:0006006^biological_process^glucose metabolic process`GO:0019853^biological_process^L-ascorbic acid biosynthetic process`GO:0009753^biological_process^response to jasmonic acid`GO:0010193^biological_process^response to ozone",".",".","."]
["TRINITY_DN47581_c2_g2","leaves S. yangii","roots S. yangii",2.53060123354517,0,0,"TRINITY_DN47581_c2_g2_i1","ISU1_ARATH^ISU1_ARATH^Q:993-535,H:2-158^76.43%ID^E:9e-80^RecName: Full=Iron-sulfur cluster assembly protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47581_c2_g2_i1.p1","496-993[-]","ISU1_ARATH^ISU1_ARATH^Q:1-153,H:2-158^76.43%ID^E:3e-83^RecName: Full=Iron-sulfur cluster assembly protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01592.13^NifU_N^NifU-like N terminal domain^24-148^E:1.1e-56",".",".","COG0822^sUF system Fes assembly protein, NifU family","KEGG:ath:AT4G22220","GO:0005759^cellular_component^mitochondrial matrix`GO:0005739^cellular_component^mitochondrion`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0008198^molecular_function^ferrous iron binding`GO:0036455^molecular_function^iron-sulfur transferase activity`GO:0005198^molecular_function^structural molecule activity`GO:0044571^biological_process^[2Fe-2S] cluster assembly`GO:0006879^biological_process^cellular iron ion homeostasis`GO:0097428^biological_process^protein maturation by iron-sulfur cluster transfer","GO:0005506^molecular_function^iron ion binding`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0016226^biological_process^iron-sulfur cluster assembly",".","."]
["TRINITY_DN47572_c2_g3","leaves S. yangii","roots S. yangii",2.52975791981882,0,0,"TRINITY_DN47572_c2_g3_i7","Y2766_ARATH^Y2766_ARATH^Q:1220-447,H:68-325^79.84%ID^E:1e-145^RecName: Full=Uncharacterized protein At2g37660, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47572_c2_g3_i7.p1","444-1211[-]","Y2766_ARATH^Y2766_ARATH^Q:7-255,H:77-325^81.93%ID^E:1e-153^RecName: Full=Uncharacterized protein At2g37660, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05368.10^NmrA^NmrA-like family^9-177^E:1.1e-09`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^10-152^E:0.00018`PF13460.3^NAD_binding_10^NAD(P)H-binding^13-219^E:2e-33",".",".","COG0702^epimerase dehydratase","KEGG:ath:AT2G37660","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009579^cellular_component^thylakoid`GO:0005507^molecular_function^copper ion binding`GO:0042742^biological_process^defense response to bacterium","GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46719_c3_g1","leaves S. yangii","roots S. yangii",2.52465438898947,0,0,"TRINITY_DN46719_c3_g1_i4","PX11C_ARATH^PX11C_ARATH^Q:206-547,H:1-114^85.96%ID^E:6e-96^RecName: Full=Peroxisomal membrane protein 11C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PX11C_ARATH^PX11C_ARATH^Q:618-959,H:112-225^77.19%ID^E:6e-96^RecName: Full=Peroxisomal membrane protein 11C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46719_c3_g1_i4.p1","206-643[+]","PX115_ORYSJ^PX115_ORYSJ^Q:1-114,H:1-114^87.72%ID^E:1e-67^RecName: Full=Peroxisomal membrane protein 11-5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF05648.11^PEX11^Peroxisomal biogenesis factor 11 (PEX11)^13-115^E:1.5e-25",".",".","ENOG4111NS6^peroxisomal biogenesis factor 11","KEGG:osa:4339973","GO:0005779^cellular_component^integral component of peroxisomal membrane`GO:0005778^cellular_component^peroxisomal membrane`GO:0016559^biological_process^peroxisome fission`GO:0044375^biological_process^regulation of peroxisome size","GO:0016559^biological_process^peroxisome fission`GO:0005779^cellular_component^integral component of peroxisomal membrane",".","."]
["TRINITY_DN39974_c0_g1","leaves S. yangii","roots S. yangii",2.5076992230314,0,0,"TRINITY_DN39974_c0_g1_i1","DHEA_NICPL^DHEA_NICPL^Q:1735-503,H:1-411^87.35%ID^E:0^RecName: Full=Glutamate dehydrogenase A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN39974_c0_g1_i1.p1","500-1735[-]","DHEA_NICPL^DHEA_NICPL^Q:1-411,H:1-411^87.35%ID^E:0^RecName: Full=Glutamate dehydrogenase A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF02812.15^ELFV_dehydrog_N^Glu/Leu/Phe/Val dehydrogenase, dimerisation domain^33-159^E:1.5e-48`PF00208.18^ELFV_dehydrog^Glutamate/Leucine/Phenylalanine/Valine dehydrogenase^176-408^E:3.7e-77",".",".",".",".","GO:0004353^molecular_function^glutamate dehydrogenase [NAD(P)+] activity`GO:0006520^biological_process^cellular amino acid metabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0006520^biological_process^cellular amino acid metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN42809_c0_g1","leaves S. yangii","roots S. yangii",2.50446417322421,0,0,"TRINITY_DN42809_c0_g1_i10","RH3_ARATH^RH3_ARATH^Q:570-322,H:57-129^55.42%ID^E:4e-12^RecName: Full=DEAD-box ATP-dependent RNA helicase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42809_c0_g1_i10.p1","208-741[-]","RH3_ARATH^RH3_ARATH^Q:58-140,H:57-129^55.42%ID^E:3e-13^RecName: Full=DEAD-box ATP-dependent RNA helicase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0513^purine NTP-dependent helicase activity","KEGG:ath:AT5G26742","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0016020^cellular_component^membrane`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0004004^molecular_function^ATP-dependent RNA helicase activity`GO:0003723^molecular_function^RNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0010501^biological_process^RNA secondary structure unwinding",".",".","."]
["TRINITY_DN42672_c0_g1","leaves S. yangii","roots S. yangii",2.46582240434683,0,0,"TRINITY_DN42672_c0_g1_i5","RD21A_ARATH^RD21A_ARATH^Q:1067-450,H:280-458^56.31%ID^E:2e-103^RecName: Full=Cysteine proteinase RD21a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RD21A_ARATH^RD21A_ARATH^Q:1607-1371,H:159-237^86.08%ID^E:2e-103^RecName: Full=Cysteine proteinase RD21a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RD21A_ARATH^RD21A_ARATH^Q:1302-1147,H:233-284^67.31%ID^E:2e-103^RecName: Full=Cysteine proteinase RD21a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RD21A_ARATH^RD21A_ARATH^Q:2680-2267,H:21-159^58.45%ID^E:5e-40^RecName: Full=Cysteine proteinase RD21a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42672_c0_g1_i5.p2","2234-2761[-]","RD21A_ARATH^RD21A_ARATH^Q:10-165,H:4-159^55%ID^E:2e-47^RecName: Full=Cysteine proteinase RD21a;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^57-112^E:6.9e-18`PF00112.20^Peptidase_C1^Papain family cysteine protease^143-165^E:0.0002","sigP:1^28^0.887^YES",".","COG4870^cathepsin","KEGG:ath:AT1G47128","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0005615^cellular_component^extracellular space`GO:0005764^cellular_component^lysosome`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0008233^molecular_function^peptidase activity`GO:0050832^biological_process^defense response to fungus`GO:0006508^biological_process^proteolysis`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46603_c0_g1","leaves S. yangii","roots S. yangii",2.45917570477278,0,0,"TRINITY_DN46603_c0_g1_i1","ACCO3_PETHY^ACCO3_PETHY^Q:225-1133,H:1-306^85.95%ID^E:1e-177^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN46603_c0_g1_i1.p1","225-1175[+]","ACCO3_PETHY^ACCO3_PETHY^Q:1-303,H:1-306^85.95%ID^E:0^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^5-92^E:7.3e-14`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^159-253^E:3.7e-27",".",".",".",".","GO:0009815^molecular_function^1-aminocyclopropane-1-carboxylate oxidase activity`GO:0031418^molecular_function^L-ascorbic acid binding`GO:0046872^molecular_function^metal ion binding`GO:0009693^biological_process^ethylene biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN41952_c0_g1","leaves S. yangii","roots S. yangii",2.4395892563113,0,0,"TRINITY_DN41952_c0_g1_i5","GDT12_ARATH^GDT12_ARATH^Q:891-385,H:81-250^70.59%ID^E:3e-59^RecName: Full=GDT1-like protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41952_c0_g1_i5.p1","301-1107[-]","GDT12_ARATH^GDT12_ARATH^Q:73-255,H:81-264^70.65%ID^E:2e-77^RecName: Full=GDT1-like protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01169.16^UPF0016^Uncharacterized protein family UPF0016^139-217^E:1.4e-20",".",".","COG2119^transmembrane protein 165",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009706^cellular_component^chloroplast inner membrane`GO:0016021^cellular_component^integral component of membrane","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46823_c2_g3","leaves S. yangii","roots S. yangii",2.4227263107044,0,0,"TRINITY_DN46823_c2_g3_i7","COL5_ARATH^COL5_ARATH^Q:404-1549,H:13-355^41.52%ID^E:2e-74^RecName: Full=Zinc finger protein CONSTANS-LIKE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46823_c2_g3_i7.p1","365-1171[+]","COL5_ARATH^COL5_ARATH^Q:14-236,H:13-235^44.26%ID^E:9e-49^RecName: Full=Zinc finger protein CONSTANS-LIKE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00643.21^zf-B_box^B-box zinc finger^60-103^E:1.8e-06",".",".","COG5641^Transcription factor","KEGG:ath:AT5G57660","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0009909^biological_process^regulation of flower development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009416^biological_process^response to light stimulus","GO:0008270^molecular_function^zinc ion binding`GO:0005622^cellular_component^intracellular",".","."]
["TRINITY_DN37989_c0_g1","leaves S. yangii","roots S. yangii",2.39276523625453,0,0,"TRINITY_DN37989_c0_g1_i2","WRK70_ARATH^WRK70_ARATH^Q:996-475,H:10-186^38.71%ID^E:9e-35^RecName: Full=Probable WRKY transcription factor 70;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37989_c0_g1_i2.p1","262-1050[-]","WRK70_ARATH^WRK70_ARATH^Q:19-225,H:10-219^36.16%ID^E:7e-36^RecName: Full=Probable WRKY transcription factor 70;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^126-185^E:2.6e-24",".",".","ENOG410YZZY^Transcription factor","KEGG:ath:AT3G56400","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:0009864^biological_process^induced systemic resistance, jasmonic acid mediated signaling pathway`GO:1900056^biological_process^negative regulation of leaf senescence`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0031347^biological_process^regulation of defense response`GO:0010200^biological_process^response to chitin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN48502_c0_g1","leaves S. yangii","roots S. yangii",2.38641634878559,0,0,"TRINITY_DN48502_c0_g1_i1","7SB1_SOYBN^7SB1_SOYBN^Q:159-1250,H:35-421^32.06%ID^E:2e-43^RecName: Full=Basic 7S globulin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN48502_c0_g1_i1.p1","60-1283[+]","7SB1_SOYBN^7SB1_SOYBN^Q:1-397,H:1-421^31.62%ID^E:1e-48^RecName: Full=Basic 7S globulin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^46-212^E:1.8e-21`PF14541.3^TAXi_C^Xylanase inhibitor C-terminal^238-385^E:9.9e-38","sigP:1^22^0.899^YES",".","ENOG410XNV7^aspartic","KEGG:gmx:547908","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0042802^molecular_function^identical protein binding`GO:0045735^molecular_function^nutrient reservoir activity`GO:0030163^biological_process^protein catabolic process`GO:0006508^biological_process^proteolysis",".",".","."]
["TRINITY_DN47330_c0_g7","leaves S. yangii","roots S. yangii",2.38391538631723,0,0,"TRINITY_DN47330_c0_g7_i1","STAD_RICCO^STAD_RICCO^Q:2-568,H:208-396^89.95%ID^E:7e-124^RecName: Full=Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN47330_c0_g7_i1.p1","2-571[+]","STAD_RICCO^STAD_RICCO^Q:1-189,H:208-396^89.95%ID^E:1e-125^RecName: Full=Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus","PF03405.11^FA_desaturase_2^Fatty acid desaturase^1-182^E:7.3e-86",".",".",".","KEGG:rcu:RCOM_1238330`KO:K03921","GO:0009507^cellular_component^chloroplast`GO:0045300^molecular_function^acyl-[acyl-carrier-protein] desaturase activity`GO:0046872^molecular_function^metal ion binding`GO:0006633^biological_process^fatty acid biosynthetic process","GO:0045300^molecular_function^acyl-[acyl-carrier-protein] desaturase activity`GO:0006631^biological_process^fatty acid metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47076_c3_g1","leaves S. yangii","roots S. yangii",2.34912833391494,0,0,"TRINITY_DN47076_c3_g1_i2","KAD2_ARATH^KAD2_ARATH^Q:242-883,H:52-264^76.64%ID^E:8e-100^RecName: Full=Adenylate kinase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47076_c3_g1_i2.p1","59-934[+]","KAD2_ARATH^KAD2_ARATH^Q:62-288,H:52-277^74.45%ID^E:8e-121^RecName: Full=Adenylate kinase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00406.19^ADK^Adenylate kinase^80-257^E:2.8e-49`PF13207.3^AAA_17^AAA domain^82-200^E:5.6e-25",".",".","COG0563^Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity)","KEGG:ath:AT5G47840`KO:K00939","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0004017^molecular_function^adenylate kinase activity`GO:0005524^molecular_function^ATP binding`GO:0046939^biological_process^nucleotide phosphorylation`GO:2000505^biological_process^regulation of energy homeostasis",".",".","."]
["TRINITY_DN45992_c1_g3","leaves S. yangii","roots S. yangii",2.34908566254323,0,0,"TRINITY_DN45992_c1_g3_i1","AVP_VIGRR^AVP_VIGRR^Q:1585-1169,H:541-679^94.24%ID^E:2e-74^RecName: Full=Pyrophosphate-energized vacuolar membrane proton pump;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna`AVP_VIGRR^AVP_VIGRR^Q:2371-2036,H:430-541^95.54%ID^E:2e-58^RecName: Full=Pyrophosphate-energized vacuolar membrane proton pump;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna`AVP_VIGRR^AVP_VIGRR^Q:698-309,H:672-766^66.15%ID^E:1e-39^RecName: Full=Pyrophosphate-energized vacuolar membrane proton pump;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna",".","TRINITY_DN45992_c1_g3_i1.p1","1025-1624[-]","AVP_VIGRR^AVP_VIGRR^Q:14-152,H:541-679^94.24%ID^E:5e-82^RecName: Full=Pyrophosphate-energized vacuolar membrane proton pump;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna","PF03030.13^H_PPase^Inorganic H+ pyrophosphatase^14-152^E:6e-55",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0009678^molecular_function^hydrogen-translocating pyrophosphatase activity`GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0046872^molecular_function^metal ion binding`GO:0015992^biological_process^proton transport","GO:0004427^molecular_function^inorganic diphosphatase activity`GO:0009678^molecular_function^hydrogen-translocating pyrophosphatase activity`GO:0015992^biological_process^proton transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46035_c5_g1","leaves S. yangii","roots S. yangii",2.34896957070359,0,0,"TRINITY_DN46035_c5_g1_i12","CHLG_ARATH^CHLG_ARATH^Q:199-1065,H:1-278^68.73%ID^E:4e-133^RecName: Full=Chlorophyll synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CHLG_ARATH^CHLG_ARATH^Q:1133-1480,H:271-351^56.03%ID^E:4e-133^RecName: Full=Chlorophyll synthase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46035_c5_g1_i12.p1","3558-4526[+]","WAK2_ARATH^WAK2_ARATH^Q:2-313,H:197-509^44.58%ID^E:6e-75^RecName: Full=Wall-associated receptor kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07645.12^EGF_CA^Calcium-binding EGF domain^88-120^E:5e-07`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^218-310^E:6.7e-15`PF00069.22^Pkinase^Protein kinase domain^218-300^E:1.8e-13",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G21270","GO:0005623^cellular_component^cell`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009992^biological_process^cellular water homeostasis`GO:0009311^biological_process^oligosaccharide metabolic process`GO:0009751^biological_process^response to salicylic acid`GO:0009826^biological_process^unidimensional cell growth","GO:0005509^molecular_function^calcium ion binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN38140_c0_g1","leaves S. yangii","roots S. yangii",2.34621550796449,0,0,"TRINITY_DN38140_c0_g1_i1","NIFU2_ARATH^NIFU2_ARATH^Q:1390-1079,H:71-174^83.65%ID^E:1e-53^RecName: Full=NifU-like protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NIFU2_ARATH^NIFU2_ARATH^Q:439-254,H:174-235^87.1%ID^E:4e-25^RecName: Full=NifU-like protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NIFU2_ARATH^NIFU2_ARATH^Q:1396-1130,H:149-235^41.76%ID^E:4e-09^RecName: Full=NifU-like protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38140_c0_g1_i1.p1","1067-1630[-]","NIFU2_ARATH^NIFU2_ARATH^Q:65-184,H:60-174^78.33%ID^E:2e-60^RecName: Full=NifU-like protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NIFU2_ARATH^NIFU2_ARATH^Q:79-167,H:149-235^41.76%ID^E:1e-10^RecName: Full=NifU-like protein 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01106.14^NifU^NifU-like domain^100-165^E:3.7e-27",".",".","COG0694^metallo-sulfur cluster assembly","KEGG:ath:AT5G49940","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0005506^molecular_function^iron ion binding`GO:0005198^molecular_function^structural molecule activity`GO:0009658^biological_process^chloroplast organization`GO:0016226^biological_process^iron-sulfur cluster assembly","GO:0005506^molecular_function^iron ion binding`GO:0051536^molecular_function^iron-sulfur cluster binding`GO:0016226^biological_process^iron-sulfur cluster assembly",".","."]
["TRINITY_DN40628_c0_g1","leaves S. yangii","roots S. yangii",2.33069548441017,0,0,"TRINITY_DN40628_c0_g1_i2","GAPN_NICPL^GAPN_NICPL^Q:178-1521,H:49-496^93.3%ID^E:0^RecName: Full=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN40628_c0_g1_i2.p1","118-1524[+]","GAPN_NICPL^GAPN_NICPL^Q:21-468,H:49-496^93.3%ID^E:0^RecName: Full=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00171.19^Aldedh^Aldehyde dehydrogenase family^18-455^E:8.1e-138",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0008886^molecular_function^glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN38932_c0_g1","leaves S. yangii","roots S. yangii",2.31023034450468,0,0,"TRINITY_DN38932_c0_g1_i1","LEUD3_ARATH^LEUD3_ARATH^Q:281-820,H:70-251^82.97%ID^E:1e-98^RecName: Full=3-isopropylmalate dehydratase small subunit 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38932_c0_g1_i1.p1","62-823[+]","LEUD3_ARATH^LEUD3_ARATH^Q:1-250,H:1-248^67.06%ID^E:2e-106^RecName: Full=3-isopropylmalate dehydratase small subunit 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00694.16^Aconitase_C^Aconitase C-terminal domain^135-187^E:3.8e-16",".",".","COG0066^Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0003861^molecular_function^3-isopropylmalate dehydratase activity`GO:0009658^biological_process^chloroplast organization`GO:0048229^biological_process^gametophyte development`GO:0019761^biological_process^glucosinolate biosynthetic process`GO:0009098^biological_process^leucine biosynthetic process`GO:0009651^biological_process^response to salt stress","GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46177_c0_g2","leaves S. yangii","roots S. yangii",2.30125087110077,"0.00011223818991749","0.000170010237455899","TRINITY_DN46177_c0_g2_i1","BH093_ARATH^BH093_ARATH^Q:965-357,H:143-351^64.93%ID^E:1e-75^RecName: Full=Transcription factor bHLH93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46177_c0_g2_i1.p1","354-1232[-]","BH093_ARATH^BH093_ARATH^Q:90-292,H:143-351^64.93%ID^E:4e-78^RecName: Full=Transcription factor bHLH93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^126-169^E:1.8e-09",".",".","ENOG410YB4F^Transcription factor","KEGG:ath:AT5G65640","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0007275^biological_process^multicellular organism development`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN43444_c2_g1","leaves S. yangii","roots S. yangii",2.2930290310359,0,0,"TRINITY_DN43444_c2_g1_i5","OCP3_ARATH^OCP3_ARATH^Q:834-307,H:186-351^62.57%ID^E:4e-58^RecName: Full=Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 {ECO:0000303|PubMed:15923348};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43444_c2_g1_i5.p1","274-1350[-]","OCP3_ARATH^OCP3_ARATH^Q:76-348,H:94-351^55.04%ID^E:1e-65^RecName: Full=Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 {ECO:0000303|PubMed:15923348};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YR5W^HOX","KEGG:ath:AT5G11270","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0004601^molecular_function^peroxidase activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0006952^biological_process^defense response`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:0002229^biological_process^defense response to oomycetes`GO:0009682^biological_process^induced systemic resistance`GO:0009867^biological_process^jasmonic acid mediated signaling pathway`GO:0009787^biological_process^regulation of abscisic acid-activated signaling pathway`GO:0031347^biological_process^regulation of defense response`GO:2000071^biological_process^regulation of defense response by callose deposition`GO:2000022^biological_process^regulation of jasmonic acid mediated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009737^biological_process^response to abscisic acid`GO:0009620^biological_process^response to fungus`GO:0009414^biological_process^response to water deprivation`GO:0010118^biological_process^stomatal movement",".",".","."]
["TRINITY_DN43570_c0_g1","leaves S. yangii","roots S. yangii",2.24253011674192,0,0,"TRINITY_DN43570_c0_g1_i1","CLPR3_ARATH^CLPR3_ARATH^Q:226-867,H:42-255^85.98%ID^E:3e-117^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPR3_ARATH^CLPR3_ARATH^Q:1388-1555,H:272-327^75%ID^E:2e-20^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43570_c0_g1_i1.p1","1-912[+]","CLPR3_ARATH^CLPR3_ARATH^Q:47-289,H:1-255^78.04%ID^E:5e-138^RecName: Full=ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic {ECO:0000303|PubMed:11299370};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00574.20^CLP_protease^Clp protease^158-289^E:4.4e-28",".",".","COG0740^Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)","KEGG:ath:AT1G09130","GO:0009507^cellular_component^chloroplast`GO:0004252^molecular_function^serine-type endopeptidase activity",".",".","."]
["TRINITY_DN46919_c3_g1","leaves S. yangii","roots S. yangii",2.2274132306242,0,0,"TRINITY_DN46919_c3_g1_i2","DIOX2_PAPSO^DIOX2_PAPSO^Q:3912-3211,H:85-308^36.86%ID^E:9e-38^RecName: Full=Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Ranunculales; Papaveraceae; Papaveroideae; Papaver`DIOX2_PAPSO^DIOX2_PAPSO^Q:1316-765,H:171-354^39.36%ID^E:9e-32^RecName: Full=Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Ranunculales; Papaveraceae; Papaveroideae; Papaver`DIOX2_PAPSO^DIOX2_PAPSO^Q:2206-1847,H:26-149^28.57%ID^E:2e-06^RecName: Full=Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Ranunculales; Papaveraceae; Papaveroideae; Papaver",".","TRINITY_DN46919_c3_g1_i2.p1","726-1283[-]","GAOX2_ARATH^GAOX2_ARATH^Q:1-161,H:192-350^42.86%ID^E:9e-43^RecName: Full=Gibberellin 20 oxidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^34-131^E:6e-29",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT5G51810`KO:K05282","GO:0045544^molecular_function^gibberellin 20-oxidase activity`GO:0005506^molecular_function^iron ion binding`GO:0009908^biological_process^flower development`GO:0009686^biological_process^gibberellin biosynthetic process`GO:0009739^biological_process^response to gibberellin`GO:0080167^biological_process^response to karrikin`GO:0009639^biological_process^response to red or far red light`GO:0009826^biological_process^unidimensional cell growth","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43209_c3_g1","leaves S. yangii","roots S. yangii",2.21732967764375,{"v":7992717719.67786,"d":"7.99E+09"},"0.000122263345052442","TRINITY_DN43209_c3_g1_i1","RL192_ARATH^RL192_ARATH^Q:35-526,H:1-164^61.59%ID^E:6e-50^RecName: Full=60S ribosomal protein L19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43209_c3_g1_i1.p2","2-715[+]","RL192_ARATH^RL192_ARATH^Q:12-188,H:1-179^59.22%ID^E:2e-73^RecName: Full=60S ribosomal protein L19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01280.17^Ribosomal_L19e^Ribosomal protein L19e^15-156^E:3.1e-60",".",".","COG2147^ribosomal protein L19","KEGG:ath:AT3G16780`KO:K02885","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0005886^cellular_component^plasma membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46511_c5_g1","leaves S. yangii","roots S. yangii",2.21202976480196,0,0,"TRINITY_DN46511_c5_g1_i12","PWD_ORYSJ^PWD_ORYSJ^Q:679-4185,H:75-1206^55.26%ID^E:0^RecName: Full=Phosphoglucan, water dikinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46511_c5_g1_i12.p1","388-2049[+]","PWD_ARATH^PWD_ARATH^Q:60-553,H:44-533^57.75%ID^E:0^RecName: Full=Phosphoglucan, water dikinase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00686.16^CBM_20^Starch binding domain^98-182^E:5e-15",".",".","COG0574^phosphotransferase activity, paired acceptors",".","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0005524^molecular_function^ATP binding`GO:0019200^molecular_function^carbohydrate kinase activity`GO:0046872^molecular_function^metal ion binding`GO:0051752^molecular_function^phosphoglucan, water dikinase activity`GO:2001070^molecular_function^starch binding`GO:0046835^biological_process^carbohydrate phosphorylation`GO:0046777^biological_process^protein autophosphorylation`GO:0005983^biological_process^starch catabolic process`GO:0005982^biological_process^starch metabolic process","GO:2001070^molecular_function^starch binding",".","."]
["TRINITY_DN45224_c3_g1","leaves S. yangii","roots S. yangii",2.17164119388561,0,0,"TRINITY_DN45224_c3_g1_i8","CALR3_ARATH^CALR3_ARATH^Q:2366-1716,H:1-215^76.96%ID^E:3e-113^RecName: Full=Calreticulin-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CALR3_ARATH^CALR3_ARATH^Q:1461-1060,H:224-357^79.85%ID^E:8e-64^RecName: Full=Calreticulin-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45224_c3_g1_i8.p1","1527-2366[-]","CALR3_ARATH^CALR3_ARATH^Q:1-226,H:1-224^76.99%ID^E:6e-125^RecName: Full=Calreticulin-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00262.15^Calreticulin^Calreticulin family^34-226^E:2.4e-37",".",".","ENOG410XRR7^Calreticulin",".","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005788^cellular_component^endoplasmic reticulum lumen`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0005509^molecular_function^calcium ion binding`GO:0030246^molecular_function^carbohydrate binding`GO:0046283^biological_process^anthocyanin-containing compound metabolic process`GO:0010204^biological_process^defense response signaling pathway, resistance gene-independent`GO:0042742^biological_process^defense response to bacterium`GO:0009626^biological_process^plant-type hypersensitive response`GO:0006457^biological_process^protein folding","GO:0005509^molecular_function^calcium ion binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0005783^cellular_component^endoplasmic reticulum",".","."]
["TRINITY_DN44020_c3_g1","leaves S. yangii","roots S. yangii",2.16232739574087,0,0,"TRINITY_DN44020_c3_g1_i5","BGAL_SOLLC^BGAL_SOLLC^Q:2753-1164,H:16-544^82.64%ID^E:0^RecName: Full=Beta-galactosidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon`BGAL_SOLLC^BGAL_SOLLC^Q:1059-601,H:535-687^77.78%ID^E:1e-69^RecName: Full=Beta-galactosidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon`BGAL_SOLLC^BGAL_SOLLC^Q:334-2,H:688-798^77.48%ID^E:3e-48^RecName: Full=Beta-galactosidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44020_c3_g1_i5.p1","1074-2804[-]","BGAL_SOLLC^BGAL_SOLLC^Q:18-547,H:16-544^82.64%ID^E:0^RecName: Full=Beta-galactosidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF01301.16^Glyco_hydro_35^Glycosyl hydrolases family 35^33-337^E:1.8e-116`PF02449.12^Glyco_hydro_42^Beta-galactosidase^53-201^E:3e-10","sigP:1^24^0.864^YES",".","COG1874^beta-galactosidase","KEGG:sly:544167","GO:0005618^cellular_component^cell wall`GO:0004565^molecular_function^beta-galactosidase activity`GO:0030246^molecular_function^carbohydrate binding`GO:0005975^biological_process^carbohydrate metabolic process","GO:0004565^molecular_function^beta-galactosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0009341^cellular_component^beta-galactosidase complex",".","."]
["TRINITY_DN46826_c0_g3","leaves S. yangii","roots S. yangii",2.1504705646553,"0.000696320323645489","0.00100039242284218","TRINITY_DN46826_c0_g3_i1","RHD31_ARATH^RHD31_ARATH^Q:1305-1,H:1-439^79.73%ID^E:0^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 homolog 1 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46826_c0_g3_i1.p1","1-1305[-]","RHD31_ARATH^RHD31_ARATH^Q:1-435,H:1-439^79.73%ID^E:0^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 homolog 1 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02263.16^GBP^Guanylate-binding protein, N-terminal domain^37-122^E:3.1e-05`PF01926.20^MMR_HSR1^50S ribosome-binding GTPase^41-125^E:3.5e-05`PF05879.9^RHD3^Root hair defective 3 GTP-binding protein (RHD3)^44-435^E:3.4e-189",".",".","ENOG410XPVJ^GTPase activity","KEGG:ath:AT1G72960","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity","GO:0003924^molecular_function^GTPase activity`GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN45343_c2_g1","leaves S. yangii","roots S. yangii",2.14105470196387,0,0,"TRINITY_DN45343_c2_g1_i8","NPC1_ARATH^NPC1_ARATH^Q:552-244,H:426-528^69.9%ID^E:2e-31^RecName: Full=Non-specific phospholipase C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NPC1_ARATH^NPC1_ARATH^Q:1356-1174,H:366-425^83.61%ID^E:4e-26^RecName: Full=Non-specific phospholipase C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45343_c2_g1_i8.p1","223-531[-]","NPC1_ARATH^NPC1_ARATH^Q:1-96,H:433-528^67.71%ID^E:3e-39^RecName: Full=Non-specific phospholipase C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG3511^phospholipase C","KEGG:ath:AT1G07230`KO:K01114","GO:0005576^cellular_component^extracellular region`GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".",".","."]
["TRINITY_DN47765_c0_g1","leaves S. yangii","roots S. yangii",2.13354154985759,"0.000260479764030121","0.000385891390678862","TRINITY_DN47765_c0_g1_i1","Y5537_ARATH^Y5537_ARATH^Q:614-6,H:28-233^49.03%ID^E:2e-59^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47765_c0_g1_i1.p1","3-683[-]","Y5537_ARATH^Y5537_ARATH^Q:18-226,H:22-233^48.58%ID^E:2e-61^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^77-164^E:1.6e-16","sigP:1^19^0.815^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G35370","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity",".",".","."]
["TRINITY_DN46656_c1_g2","leaves S. yangii","roots S. yangii",2.12596452035074,0,0,"TRINITY_DN46656_c1_g2_i1","FACR2_ARATH^FACR2_ARATH^Q:1017-259,H:347-614^42.91%ID^E:1e-70^RecName: Full=Fatty acyl-CoA reductase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46656_c1_g2_i1.p1","241-969[-]","FACR2_ARATH^FACR2_ARATH^Q:1-237,H:363-614^42.06%ID^E:4e-65^RecName: Full=Fatty acyl-CoA reductase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07993.9^NAD_binding_4^Male sterility protein^1-75^E:2e-17`PF03015.16^Sterile^Male sterility protein^168-236^E:3.3e-14",".",".","ENOG410XS7R^fatty-acyl-CoA reductase (alcohol-forming) activity","KEGG:ath:AT3G11980`KO:K13356","GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity`GO:0016628^molecular_function^oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor`GO:0006629^biological_process^lipid metabolic process`GO:0010584^biological_process^pollen exine formation","GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity",".","."]
["TRINITY_DN43943_c0_g1","leaves S. yangii","roots S. yangii",2.11572432500748,0,0,"TRINITY_DN43943_c0_g1_i2","HEM21_ARATH^HEM21_ARATH^Q:1146-1976,H:152-430^90.68%ID^E:2e-176^RecName: Full=Delta-aminolevulinic acid dehydratase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HEM21_ARATH^HEM21_ARATH^Q:313-747,H:24-165^66.89%ID^E:8e-24^RecName: Full=Delta-aminolevulinic acid dehydratase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43943_c0_g1_i2.p1","277-831[+]","HEM21_ARATH^HEM21_ARATH^Q:13-157,H:24-165^66.89%ID^E:1e-47^RecName: Full=Delta-aminolevulinic acid dehydratase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00490.18^ALAD^Delta-aminolevulinic acid dehydratase^98-151^E:1.1e-10",".",".","COG0113^delta-aminolevulinic acid dehydratase","KEGG:ath:AT1G69740`KO:K01698","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0004655^molecular_function^porphobilinogen synthase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015995^biological_process^chlorophyll biosynthetic process`GO:0006783^biological_process^heme biosynthetic process`GO:0006779^biological_process^porphyrin-containing compound biosynthetic process`GO:0006782^biological_process^protoporphyrinogen IX biosynthetic process","GO:0004655^molecular_function^porphobilinogen synthase activity`GO:0046872^molecular_function^metal ion binding`GO:0033014^biological_process^tetrapyrrole biosynthetic process",".","."]
["TRINITY_DN43873_c5_g1","leaves S. yangii","roots S. yangii",2.09222188947819,0,0,"TRINITY_DN43873_c5_g1_i10","SVP_ARATH^SVP_ARATH^Q:352-984,H:1-240^45.83%ID^E:5e-57^RecName: Full=MADS-box protein SVP;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43873_c5_g1_i10.p1","352-990[+]","SVP_ARATH^SVP_ARATH^Q:1-211,H:1-240^45.83%ID^E:1e-59^RecName: Full=MADS-box protein SVP;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00319.15^SRF-TF^SRF-type transcription factor (DNA-binding and dimerisation domain)^10-57^E:1.2e-23`PF01486.14^K-box^K-box region^91-170^E:5.7e-13",".",".","COG5068^Transcription factor","KEGG:ath:AT2G22540","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0000900^molecular_function^translation repressor activity, nucleic acid binding`GO:0030154^biological_process^cell differentiation`GO:0048438^biological_process^floral whorl development`GO:0009910^biological_process^negative regulation of flower development`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0017148^biological_process^negative regulation of translation`GO:0009266^biological_process^response to temperature stimulus`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0046983^molecular_function^protein dimerization activity`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN45911_c0_g1","leaves S. yangii","roots S. yangii",2.08032823719023,"0.00168481509388934","0.00235188116566063","TRINITY_DN45911_c0_g1_i3","U74F2_ARATH^U74F2_ARATH^Q:928-317,H:4-206^43.87%ID^E:5e-49^RecName: Full=UDP-glycosyltransferase 74F2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45911_c0_g1_i3.p1","290-940[-]","U74F2_ARATH^U74F2_ARATH^Q:5-208,H:4-206^43.87%ID^E:5e-53^RecName: Full=UDP-glycosyltransferase 74F2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1819^Transferase","KEGG:ath:AT2G43820`KO:K13691","GO:0043231^cellular_component^intracellular membrane-bounded organelle`GO:0052641^molecular_function^benzoic acid glucosyltransferase activity`GO:0080043^molecular_function^quercetin 3-O-glucosyltransferase activity`GO:0080044^molecular_function^quercetin 7-O-glucosyltransferase activity`GO:0052639^molecular_function^salicylic acid glucosyltransferase (ester-forming) activity`GO:0052640^molecular_function^salicylic acid glucosyltransferase (glucoside-forming) activity`GO:0080002^molecular_function^UDP-glucose:4-aminobenzoate acylglucosyltransferase activity`GO:0035251^molecular_function^UDP-glucosyltransferase activity`GO:0018874^biological_process^benzoate metabolic process`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0052696^biological_process^flavonoid glucuronidation`GO:0046482^biological_process^para-aminobenzoic acid metabolic process`GO:0009696^biological_process^salicylic acid metabolic process",".",".","."]
["TRINITY_DN44225_c6_g3","leaves S. yangii","roots S. yangii",2.04817934277886,0,0,"TRINITY_DN44225_c6_g3_i2","TATA_PEA^TATA_PEA^Q:529-245,H:44-133^66.32%ID^E:2e-32^RecName: Full=Sec-independent protein translocase protein TATA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44225_c6_g3_i2.p1","230-670[-]","TATA_PEA^TATA_PEA^Q:48-141,H:44-132^67.02%ID^E:3e-34^RecName: Full=Sec-independent protein translocase protein TATA, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF02416.13^MttA_Hcf106^mttA/Hcf106 family^65-117^E:3.1e-19",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0031361^cellular_component^integral component of thylakoid membrane`GO:0033281^cellular_component^TAT protein transport complex`GO:0009977^molecular_function^proton motive force dependent protein transmembrane transporter activity`GO:0045038^biological_process^protein import into chloroplast thylakoid membrane`GO:0009306^biological_process^protein secretion`GO:0043953^biological_process^protein transport by the Tat complex","GO:0008565^molecular_function^protein transporter activity`GO:0015031^biological_process^protein transport",".","."]
["TRINITY_DN47484_c5_g1","leaves S. yangii","roots S. yangii",2.04813416686012,0,0,"TRINITY_DN47484_c5_g1_i12","SSY3_SOLTU^SSY3_SOLTU^Q:365-1081,H:825-1063^84.52%ID^E:7e-140^RecName: Full=Soluble starch synthase 3, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47484_c5_g1_i12.p1","386-1081[+]","SSY3_SOLTU^SSY3_SOLTU^Q:2-232,H:833-1063^86.58%ID^E:2e-141^RecName: Full=Soluble starch synthase 3, chloroplastic/amyloplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF08323.8^Glyco_transf_5^Starch synthase catalytic domain^11-114^E:1.5e-25`PF13439.3^Glyco_transf_4^Glycosyltransferase Family 4^45-160^E:4.6e-07",".",".",".",".","GO:0009501^cellular_component^amyloplast`GO:0009507^cellular_component^chloroplast`GO:0033201^molecular_function^alpha-1,4-glucan synthase activity`GO:0004373^molecular_function^glycogen (starch) synthase activity`GO:2001070^molecular_function^starch binding`GO:0009011^molecular_function^starch synthase activity`GO:0019252^biological_process^starch biosynthetic process",".",".","."]
["TRINITY_DN45414_c5_g3","leaves S. yangii","roots S. yangii",2.03991497757403,{"v":7749321081.70024,"d":"7.75E+09"},"0.000118684095596531","TRINITY_DN45414_c5_g3_i4","CYPH_SOLLC^CYPH_SOLLC^Q:407-3,H:1-135^83.7%ID^E:1e-71^RecName: Full=Peptidyl-prolyl cis-trans isomerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45414_c5_g3_i4.p1","3-470[-]","CYPH_SOLLC^CYPH_SOLLC^Q:22-156,H:1-135^83.7%ID^E:2e-81^RecName: Full=Peptidyl-prolyl cis-trans isomerase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00160.18^Pro_isomerase^Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD^28-156^E:2.6e-37",".",".","COG0652^peptidyl-prolyl cis-trans isomerase activity","KEGG:sly:100736432`KO:K01802","GO:0005737^cellular_component^cytoplasm`GO:0042277^molecular_function^peptide binding`GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0006457^biological_process^protein folding","GO:0003755^molecular_function^peptidyl-prolyl cis-trans isomerase activity`GO:0000413^biological_process^protein peptidyl-prolyl isomerization`GO:0006457^biological_process^protein folding",".","."]
["TRINITY_DN43094_c1_g2","leaves S. yangii","roots S. yangii",2.03699093317025,0,0,"TRINITY_DN43094_c1_g2_i1","WLIM1_ARATH^WLIM1_ARATH^Q:141-689,H:1-183^83.61%ID^E:1e-110^RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WLIM1_ARATH^WLIM1_ARATH^Q:132-362,H:98-174^41.56%ID^E:3e-13^RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43094_c1_g2_i1.p1","141-701[+]","WLIM1_ARATH^WLIM1_ARATH^Q:1-183,H:1-183^83.61%ID^E:4e-113^RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00412.19^LIM^LIM domain^10-64^E:1.7e-10`PF00412.19^LIM^LIM domain^110-164^E:4.1e-12",".",".","COG5069^Microtubule associated monoxygenase, calponin and LIM domain containing","KEGG:ath:AT1G10200","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005886^cellular_component^plasma membrane`GO:0051015^molecular_function^actin filament binding`GO:0008270^molecular_function^zinc ion binding`GO:0051017^biological_process^actin filament bundle assembly","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN25456_c0_g1","leaves S. yangii","roots S. yangii",2.0316674649042,{"v":8753158616.01795,"d":"8.75E+09"},"0.000133480748998959","TRINITY_DN25456_c0_g1_i1","C81D1_ARATH^C81D1_ARATH^Q:59-1516,H:8-502^44.77%ID^E:1e-139^RecName: Full=Cytochrome P450 81D1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN25456_c0_g1_i1.p1","53-1525[+]","C81E8_MEDTR^C81E8_MEDTR^Q:1-480,H:8-490^43.51%ID^E:3e-145^RecName: Full=Cytochrome P450 81E8 {ECO:0000303|PubMed:14617078};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF00067.19^p450^Cytochrome P450^30-463^E:2e-90",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44809_c2_g1","leaves S. yangii","roots S. yangii",2.02795740839012,0,0,"TRINITY_DN44809_c2_g1_i3","Y2626_ARATH^Y2626_ARATH^Q:5272-3848,H:84-555^74.58%ID^E:0^RecName: Full=BTB/POZ domain-containing protein At2g46260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y2626_ARATH^Y2626_ARATH^Q:5822-5601,H:9-79^54.67%ID^E:3e-12^RecName: Full=BTB/POZ domain-containing protein At2g46260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44809_c2_g1_i3.p1","3842-5278[-]","Y2626_ARATH^Y2626_ARATH^Q:3-477,H:84-555^74.79%ID^E:0^RecName: Full=BTB/POZ domain-containing protein At2g46260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00651.28^BTB^BTB/POZ domain^71-158^E:1.8e-13`PF07707.12^BACK^BTB And C-terminal Kelch^185-276^E:4.4e-09",".",".","ENOG410YD15^BTB POZ domain-containing protein","KEGG:ath:AT2G46260","GO:0031463^cellular_component^Cul3-RING ubiquitin ligase complex`GO:0005634^cellular_component^nucleus`GO:0046982^molecular_function^protein heterodimerization activity`GO:0042803^molecular_function^protein homodimerization activity`GO:0016567^biological_process^protein ubiquitination`GO:0010114^biological_process^response to red light","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN41514_c0_g1","leaves S. yangii","roots S. yangii",2.01467349342535,0,0,"TRINITY_DN41514_c0_g1_i4","SRS31_ARATH^SRS31_ARATH^Q:1870-1292,H:36-236^70.44%ID^E:4e-72^RecName: Full=Serine/arginine-rich splicing factor RS31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SRS31_ARATH^SRS31_ARATH^Q:3317-3210,H:1-36^88.89%ID^E:4e-12^RecName: Full=Serine/arginine-rich splicing factor RS31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41514_c0_g1_i4.p2","333-707[+]","KIC_ARATH^KIC_ARATH^Q:13-119,H:20-126^67.29%ID^E:7e-49^RecName: Full=Calcium-binding protein KIC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13833.3^EF-hand_8^EF-hand domain pair^47-98^E:8.7e-15",".",".","COG5126^Calcium-binding protein","KEGG:ath:AT2G46600","GO:0005509^molecular_function^calcium ion binding`GO:0010091^biological_process^trichome branching","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN43632_c4_g1","leaves S. yangii","roots S. yangii",2.00059836256044,{"v":9553991293.66254,"d":"9.55E+09"},"0.000145269291430327","TRINITY_DN43632_c4_g1_i1","PP441_ARATH^PP441_ARATH^Q:1753-308,H:13-497^48.57%ID^E:3e-162^RecName: Full=Pentatricopeptide repeat-containing protein At5g61800;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43632_c4_g1_i1.p1","194-1846[-]","PP441_ARATH^PP441_ARATH^Q:32-513,H:13-497^48.68%ID^E:2e-165^RecName: Full=Pentatricopeptide repeat-containing protein At5g61800;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^100-147^E:0.007`PF01535.17^PPR^PPR repeat^104-130^E:0.32`PF01535.17^PPR^PPR repeat^176-196^E:0.38`PF12854.4^PPR_1^PPR repeat^199-229^E:4.3e-09`PF13041.3^PPR_2^PPR repeat family^202-232^E:1e-08`PF01535.17^PPR^PPR repeat^204-232^E:2.1e-08`PF01535.17^PPR^PPR repeat^235-262^E:1.6e-05`PF01535.17^PPR^PPR repeat^274-300^E:0.49`PF01535.17^PPR^PPR repeat^308-334^E:0.051`PF01535.17^PPR^PPR repeat^337-366^E:0.32`PF01535.17^PPR^PPR repeat^378-398^E:0.04`PF01535.17^PPR^PPR repeat^409-433^E:0.074",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G61800",".",".",".","."]
["TRINITY_DN40960_c0_g1","leaves S. yangii","roots S. yangii",1.99443921248282,"0.000189617854756364","0.000283624370185107","TRINITY_DN40960_c0_g1_i8","GUX7_ARATH^GUX7_ARATH^Q:1499-354,H:112-494^69.97%ID^E:0^RecName: Full=Putative glucuronosyltransferase PGSIP7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40960_c0_g1_i8.p1","351-1517[-]","GUX7_ARATH^GUX7_ARATH^Q:7-388,H:112-494^69.97%ID^E:0^RecName: Full=Putative glucuronosyltransferase PGSIP7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5597^Glycosyl Transferase","KEGG:ath:AT4G16600","GO:0016021^cellular_component^integral component of membrane`GO:0046872^molecular_function^metal ion binding`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".",".","."]
["TRINITY_DN45713_c3_g7","leaves S. yangii","roots S. yangii",1.94589359287078,0,0,"TRINITY_DN45713_c3_g7_i2","GSTUJ_ARATH^GSTUJ_ARATH^Q:2-391,H:87-216^67.69%ID^E:8e-44^RecName: Full=Glutathione S-transferase U19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45713_c3_g7_i2.p2","2-403[+]","GSTUJ_ARATH^GSTUJ_ARATH^Q:1-133,H:87-219^66.92%ID^E:1e-58^RecName: Full=Glutathione S-transferase U19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00043.22^GST_C^Glutathione S-transferase, C-terminal domain^31-106^E:4.4e-06`PF13410.3^GST_C_2^Glutathione S-transferase, C-terminal domain^38-102^E:6.4e-09",".",".","ENOG410XSIX^glutathione Stransferase","KEGG:ath:AT1G78380`KO:K00799","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0043295^molecular_function^glutathione binding`GO:0004364^molecular_function^glutathione transferase activity`GO:0004601^molecular_function^peroxidase activity`GO:0042631^biological_process^cellular response to water deprivation`GO:0006749^biological_process^glutathione metabolic process`GO:0046686^biological_process^response to cadmium ion`GO:0006979^biological_process^response to oxidative stress`GO:0009407^biological_process^toxin catabolic process",".",".","."]
["TRINITY_DN46263_c0_g3","leaves S. yangii","roots S. yangii",1.92023064199568,{"v":8191211935.15453,"d":"8.19E+09"},"0.000125185223022129","TRINITY_DN46263_c0_g3_i2","PME53_ARATH^PME53_ARATH^Q:115-1185,H:27-383^74.23%ID^E:0^RecName: Full=Probable pectinesterase 53;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46263_c0_g3_i2.p1","52-1188[+]","PME53_ARATH^PME53_ARATH^Q:19-378,H:24-383^73.61%ID^E:0^RecName: Full=Probable pectinesterase 53;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01095.16^Pectinesterase^Pectinesterase^88-372^E:1.1e-75","sigP:1^23^0.91^YES",".","COG4677^pectinesterase","KEGG:ath:AT5G19730`KO:K01051","GO:0005618^cellular_component^cell wall`GO:0005737^cellular_component^cytoplasm`GO:0005576^cellular_component^extracellular region`GO:0045330^molecular_function^aspartyl esterase activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0045490^biological_process^pectin catabolic process","GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0005618^cellular_component^cell wall",".","."]
["TRINITY_DN46040_c3_g1","leaves S. yangii","roots S. yangii",1.9067437141619,{"v":9184895272.47888,"d":"9.18E+09"},"0.000139835071437837","TRINITY_DN46040_c3_g1_i3","AUR3_ARATH^AUR3_ARATH^Q:293-1108,H:12-283^81.99%ID^E:1e-160^RecName: Full=Serine/threonine-protein kinase Aurora-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46040_c3_g1_i3.p1","2227-3111[-]","GRF12_ORYSJ^GRF12_ORYSJ^Q:53-158,H:79-183^51.85%ID^E:9e-30^RecName: Full=Growth-regulating factor 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08879.7^WRC^WRC^117-158^E:4.4e-17",".",".","ENOG410YJFR^growth regulating factor protein","KEGG:osa:4336731","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0032502^biological_process^developmental process`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46292_c0_g5","leaves S. yangii","roots S. yangii",1.89914851913365,"0.000978041389850127","0.00139001737001239","TRINITY_DN46292_c0_g5_i1","R13L2_ARATH^R13L2_ARATH^Q:338-36,H:120-236^31.62%ID^E:2e-08^RecName: Full=Putative disease resistance RPP13-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46292_c0_g5_i1.p1","3-641[-]","R13L2_ARATH^R13L2_ARATH^Q:102-202,H:120-236^31.62%ID^E:2e-08^RecName: Full=Putative disease resistance RPP13-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^134-208^E:1.5e-13",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G46710","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47296_c3_g1","leaves S. yangii","roots S. yangii",1.89640057072504,"0.000195735091177382","0.000292512823687702","TRINITY_DN47296_c3_g1_i1","FATB_CUPHO^FATB_CUPHO^Q:214-360,H:116-165^52%ID^E:4e-10^RecName: Full=Palmitoyl-acyl carrier protein thioesterase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Cuphea`FATB_CUPHO^FATB_CUPHO^Q:467-520,H:164-181^72.22%ID^E:4e-10^RecName: Full=Palmitoyl-acyl carrier protein thioesterase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Cuphea",".","TRINITY_DN47296_c3_g1_i1.p1","1-519[+]","FATB_CUPHO^FATB_CUPHO^Q:72-120,H:116-165^52%ID^E:7e-08^RecName: Full=Palmitoyl-acyl carrier protein thioesterase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Cuphea",".",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0016790^molecular_function^thiolester hydrolase activity`GO:0006633^biological_process^fatty acid biosynthetic process",".",".","."]
["TRINITY_DN44660_c0_g2","leaves S. yangii","roots S. yangii",1.82542158886046,"0.000159209438883662","0.000239109519941614","TRINITY_DN44660_c0_g2_i3","TLPH_ARATH^TLPH_ARATH^Q:67-699,H:27-239^56.48%ID^E:9e-70^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44660_c0_g2_i3.p1","1-933[+]","PR5_ARATH^PR5_ARATH^Q:5-233,H:9-239^56.78%ID^E:5e-82^RecName: Full=Pathogenesis-related protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00314.14^Thaumatin^Thaumatin family^23-233^E:2e-82","sigP:1^20^0.759^YES",".","ENOG4111KEV^thaumatin-like protein","KEGG:ath:AT1G75040","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005773^cellular_component^vacuole`GO:0031540^biological_process^regulation of anthocyanin biosynthetic process`GO:0046686^biological_process^response to cadmium ion`GO:0010224^biological_process^response to UV-B`GO:0009615^biological_process^response to virus`GO:0009627^biological_process^systemic acquired resistance",".",".","."]
["TRINITY_DN44079_c1_g1","leaves S. yangii","roots S. yangii",1.81352534773961,0,0,"TRINITY_DN44079_c1_g1_i2","ORYA_ORYSJ^ORYA_ORYSJ^Q:1784-510,H:22-444^72.79%ID^E:0^RecName: Full=Oryzain alpha chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44079_c1_g1_i2.p1","471-1853[-]","ORYA_ORYSJ^ORYA_ORYSJ^Q:24-448,H:22-444^72.79%ID^E:0^RecName: Full=Oryzain alpha chain;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^45-102^E:6.4e-18`PF00112.20^Peptidase_C1^Papain family cysteine protease^133-347^E:1.8e-87`PF00396.15^Granulin^Granulin^382-428^E:1.8e-10","sigP:1^22^0.94^YES",".","COG4870^cathepsin",".","GO:0005615^cellular_component^extracellular space`GO:0005764^cellular_component^lysosome`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN4896_c0_g1","leaves S. yangii","roots S. yangii",1.80918891863206,{"v":8703958219.02217,"d":"8.70E+09"},"0.000132746603138608","TRINITY_DN4896_c0_g1_i1","PUB24_ARATH^PUB24_ARATH^Q:178-1395,H:6-445^40.44%ID^E:6e-101^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN4896_c0_g1_i1.p1","175-1407[+]","PUB24_ARATH^PUB24_ARATH^Q:2-407,H:6-445^40.67%ID^E:3e-105^RecName: Full=E3 ubiquitin-protein ligase PUB24;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^6-82^E:4.3e-17",".",".","ENOG410Y8GW^Ubiquitin-protein ligase","KEGG:ath:AT3G11840","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0006952^biological_process^defense response","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN44689_c0_g1","leaves S. yangii","roots S. yangii",1.8041549158202,0,0,"TRINITY_DN44689_c0_g1_i3","ISPG_ARATH^ISPG_ARATH^Q:790-2475,H:1-560^82.74%ID^E:0^RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ISPG_ARATH^ISPG_ARATH^Q:2710-2994,H:578-672^81.05%ID^E:8e-42^RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ISPG_ARATH^ISPG_ARATH^Q:2583-2663,H:560-586^88.89%ID^E:8e-42^RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44689_c0_g1_i3.p1","790-2478[+]","ISPG_ARATH^ISPG_ARATH^Q:1-562,H:1-560^82.74%ID^E:0^RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04551.11^GcpE^GcpE protein^89-370^E:7.2e-111",".",".","COG0821^4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity",".","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0046429^molecular_function^4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity`GO:0005506^molecular_function^iron ion binding`GO:0019288^biological_process^isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway`GO:0009617^biological_process^response to bacterium`GO:0009862^biological_process^systemic acquired resistance, salicylic acid mediated signaling pathway`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0046429^molecular_function^4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN57610_c0_g1","leaves S. yangii","roots S. yangii",1.78422582361178,{"v":8210508167.58535,"d":"8.21E+09"},"0.000125472483847109","TRINITY_DN57610_c0_g1_i1","SCP28_ARATH^SCP28_ARATH^Q:1331-18,H:24-462^61.76%ID^E:0^RecName: Full=Serine carboxypeptidase-like 28;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN57610_c0_g1_i1.p1","15-1421[-]","SCP28_ARATH^SCP28_ARATH^Q:23-468,H:14-462^60.67%ID^E:0^RecName: Full=Serine carboxypeptidase-like 28;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^51-459^E:1.4e-136","sigP:1^31^0.511^YES",".","COG2939^carboxy-peptidase","KEGG:ath:AT2G35770`KO:K16297","GO:0005576^cellular_component^extracellular region`GO:0005773^cellular_component^vacuole`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46746_c1_g3","leaves S. yangii","roots S. yangii",1.72434257196808,"0.000692367064543337","0.000994826740626336","TRINITY_DN46746_c1_g3_i1","PP323_ARATH^PP323_ARATH^Q:2129-261,H:16-637^50.16%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g19191, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP323_ARATH^PP323_ARATH^Q:1232-630,H:8-207^25.85%ID^E:4e-16^RecName: Full=Pentatricopeptide repeat-containing protein At4g19191, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46746_c1_g3_i1.p1","234-2168[-]","PP323_ARATH^PP323_ARATH^Q:14-636,H:16-637^50.48%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g19191, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP323_ARATH^PP323_ARATH^Q:313-513,H:8-207^25.85%ID^E:2e-16^RecName: Full=Pentatricopeptide repeat-containing protein At4g19191, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^17-43^E:0.052`PF01535.17^PPR^PPR repeat^89-115^E:0.0079`PF01535.17^PPR^PPR repeat^119-145^E:0.031`PF01535.17^PPR^PPR repeat^221-249^E:2.9e-05`PF01535.17^PPR^PPR repeat^294-320^E:0.31`PF13041.3^PPR_2^PPR repeat family^322-359^E:8.8e-11`PF12854.4^PPR_1^PPR repeat^322-349^E:8.6e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^322-368^E:0.0079`PF01535.17^PPR^PPR repeat^323-353^E:7.3e-09`PF01535.17^PPR^PPR repeat^395-420^E:0.0046`PF13812.3^PPR_3^Pentatricopeptide repeat domain^420-468^E:1.3e-07`PF13041.3^PPR_2^PPR repeat family^422-468^E:4.9e-12`PF01535.17^PPR^PPR repeat^424-454^E:2.3e-07`PF01535.17^PPR^PPR repeat^459-484^E:0.017`PF01535.17^PPR^PPR repeat^498-520^E:0.3",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G19191","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN43181_c0_g1","leaves S. yangii","roots S. yangii",1.70513896817907,"0.000131009645789715","0.000197727812769948","TRINITY_DN43181_c0_g1_i1","PP160_ARATH^PP160_ARATH^Q:1504-86,H:155-626^52.43%ID^E:5e-178^RecName: Full=Pentatricopeptide repeat-containing protein At2g17525, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43181_c0_g1_i1.p1","83-1504[-]","PP160_ARATH^PP160_ARATH^Q:1-473,H:155-626^52.43%ID^E:2e-178^RecName: Full=Pentatricopeptide repeat-containing protein At2g17525, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^29-59^E:0.0071`PF13812.3^PPR_3^Pentatricopeptide repeat domain^49-106^E:3.7e-06`PF12854.4^PPR_1^PPR repeat^58-89^E:1.4e-11`PF13041.3^PPR_2^PPR repeat family^62-91^E:3.7e-08`PF01535.17^PPR^PPR repeat^64-91^E:2.3e-07`PF12854.4^PPR_1^PPR repeat^95-119^E:2e-05`PF01535.17^PPR^PPR repeat^95-124^E:0.0036`PF01535.17^PPR^PPR repeat^133-159^E:0.26`PF13812.3^PPR_3^Pentatricopeptide repeat domain^152-206^E:1.1e-06`PF13041.3^PPR_2^PPR repeat family^163-210^E:4e-13`PF01535.17^PPR^PPR repeat^165-195^E:6.8e-05`PF12854.4^PPR_1^PPR repeat^193-226^E:2.9e-12`PF13041.3^PPR_2^PPR repeat family^197-246^E:4.9e-16`PF01535.17^PPR^PPR repeat^201-230^E:4e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^221-278^E:2.6e-07`PF12854.4^PPR_1^PPR repeat^229-260^E:7.1e-06`PF01535.17^PPR^PPR repeat^235-263^E:0.00044`PF01535.17^PPR^PPR repeat^273-298^E:0.033`PF01535.17^PPR^PPR repeat^311-334^E:0.0016`PF13812.3^PPR_3^Pentatricopeptide repeat domain^326-384^E:0.002`PF12854.4^PPR_1^PPR repeat^337-365^E:3e-08`PF01535.17^PPR^PPR repeat^341-367^E:1.7e-06`PF13041.3^PPR_2^PPR repeat family^375-420^E:5.2e-10`PF01535.17^PPR^PPR repeat^375-405^E:0.0019`PF13812.3^PPR_3^Pentatricopeptide repeat domain^395-450^E:0.0016`PF01535.17^PPR^PPR repeat^411-440^E:0.032",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G17525","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN47191_c2_g1","leaves S. yangii","roots S. yangii",1.69745248885848,"0.000294851906656982","0.000435066054178247","TRINITY_DN47191_c2_g1_i1","Y5614_ARATH^Y5614_ARATH^Q:364-1353,H:681-1004^49.09%ID^E:5e-97^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56140;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47191_c2_g1_i1.p1","103-1371[+]","Y5614_ARATH^Y5614_ARATH^Q:25-417,H:627-1004^44.84%ID^E:7e-100^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56140;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^101-297^E:1.5e-45`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^103-371^E:3.8e-45",".",".","ENOG410XSG4^(E 0.0) leucine-rich repeat family protein protein kinase family protein","KEGG:ath:AT1G56140","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN30227_c0_g1","leaves S. yangii","roots S. yangii",1.69510692538016,{"v":8061389601.22838,"d":"8.06E+09"},"0.000123261215763375","TRINITY_DN30227_c0_g1_i1","PP271_ARATH^PP271_ARATH^Q:2055-142,H:45-686^63.45%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g49142;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN30227_c0_g1_i1.p1","139-2127[-]","PP271_ARATH^PP271_ARATH^Q:25-662,H:45-686^63.45%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g49142;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^87-114^E:0.074`PF01535.17^PPR^PPR repeat^160-186^E:0.0059`PF12854.4^PPR_1^PPR repeat^185-214^E:1.4e-07`PF01535.17^PPR^PPR repeat^188-215^E:2e-08`PF13041.3^PPR_2^PPR repeat family^255-300^E:1.6e-08`PF01535.17^PPR^PPR repeat^256-286^E:4.1e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^278-336^E:0.00037`PF01535.17^PPR^PPR repeat^329-354^E:8.7e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^347-401^E:5.4e-05`PF13041.3^PPR_2^PPR repeat family^354-402^E:3.5e-10`PF01535.17^PPR^PPR repeat^357-387^E:3.1e-09`PF01535.17^PPR^PPR repeat^393-419^E:0.74`PF01535.17^PPR^PPR repeat^429-453^E:0.61`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^528-652^E:2.7e-43",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G49142",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN89256_c0_g1","leaves S. yangii","roots S. yangii",1.67623071089205,"0.000997294955813758","0.00141649862533828","TRINITY_DN89256_c0_g1_i1","PP169_ARATH^PP169_ARATH^Q:129-1952,H:58-667^40.62%ID^E:1e-155^RecName: Full=Pentatricopeptide repeat-containing protein At2g22410, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN89256_c0_g1_i1.p1","24-2012[+]","PP169_ARATH^PP169_ARATH^Q:36-643,H:58-667^40.62%ID^E:4e-157^RecName: Full=Pentatricopeptide repeat-containing protein At2g22410, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^93-141^E:0.0024`PF13041.3^PPR_2^PPR repeat family^94-142^E:7.7e-09`PF01535.17^PPR^PPR repeat^98-127^E:0.00017`PF13041.3^PPR_2^PPR repeat family^197-243^E:3e-11`PF12854.4^PPR_1^PPR repeat^197-225^E:6e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^197-243^E:0.00031`PF01535.17^PPR^PPR repeat^199-229^E:8.4e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^260-297^E:0.0024`PF01535.17^PPR^PPR repeat^272-299^E:0.00072`PF01535.17^PPR^PPR repeat^300-323^E:0.0001`PF13041.3^PPR_2^PPR repeat family^328-375^E:2.6e-08`PF01535.17^PPR^PPR repeat^331-358^E:1.7e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^389-431^E:0.00026`PF01535.17^PPR^PPR repeat^403-431^E:1.4e-06`PF13041.3^PPR_2^PPR repeat family^429-478^E:4e-13`PF13812.3^PPR_3^Pentatricopeptide repeat domain^430-476^E:5.9e-05`PF01535.17^PPR^PPR repeat^432-462^E:3e-06`PF01535.17^PPR^PPR repeat^467-493^E:0.05`PF01535.17^PPR^PPR repeat^505-529^E:0.004",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G22410","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN34678_c0_g2","leaves S. yangii","roots S. yangii",1.6725407834899,"0.00112731398795489","0.00159386320235019","TRINITY_DN34678_c0_g2_i1","PP276_ARATH^PP276_ARATH^Q:2277-166,H:16-731^48.68%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g49740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN34678_c0_g2_i1.p1","148-2295[-]","PP276_ARATH^PP276_ARATH^Q:7-714,H:16-735^48.68%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g49740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^116-145^E:6e-05`PF01535.17^PPR^PPR repeat^148-172^E:0.0019`PF13041.3^PPR_2^PPR repeat family^246-292^E:1.8e-09`PF01535.17^PPR^PPR repeat^248-277^E:0.00048`PF13041.3^PPR_2^PPR repeat family^343-388^E:3e-10`PF01535.17^PPR^PPR repeat^346-376^E:1e-05`PF01535.17^PPR^PPR repeat^416-443^E:0.0053`PF13041.3^PPR_2^PPR repeat family^442-485^E:6.4e-08`PF01535.17^PPR^PPR repeat^444-474^E:0.0047`PF01535.17^PPR^PPR repeat^513-538^E:0.045`PF01535.17^PPR^PPR repeat^542-567^E:0.00021`PF01535.17^PPR^PPR repeat^574-600^E:0.015`PF01535.17^PPR^PPR repeat^680-705^E:0.5",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G49740",".",".",".","."]
["TRINITY_DN41830_c0_g1","leaves S. yangii","roots S. yangii",1.66092942403889,"0.00203240768483452","0.00281984206427505","TRINITY_DN41830_c0_g1_i3","PEK13_ARATH^PEK13_ARATH^Q:1128-268,H:341-631^41.44%ID^E:5e-64^RecName: Full=Proline-rich receptor-like protein kinase PERK13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41830_c0_g1_i3.p1","220-2076[-]","PEK13_ARATH^PEK13_ARATH^Q:317-603,H:341-631^41.44%ID^E:5e-65^RecName: Full=Proline-rich receptor-like protein kinase PERK13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^331-595^E:4.3e-37`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^332-596^E:4.2e-36",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G70460","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45297_c0_g1","leaves S. yangii","roots S. yangii",1.63029181937807,"0.000317693843980486","0.000467642953166418","TRINITY_DN45297_c0_g1_i2","PXL2_ARATH^PXL2_ARATH^Q:197-1612,H:539-1011^64.23%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:51-212,H:490-543^61.11%ID^E:5e-12^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:15-194,H:142-201^40%ID^E:6e-07^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:197-349,H:203-253^33.33%ID^E:6e-07^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:188-349,H:272-325^42.59%ID^E:1e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:51-194,H:226-273^39.58%ID^E:1e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:200-355,H:324-375^40.38%ID^E:2e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PXL2_ARATH^PXL2_ARATH^Q:42-146,H:271-305^37.14%ID^E:2e-06^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45297_c0_g1_i2.p1","221-1621[+]","PXL2_ARATH^PXL2_ARATH^Q:1-466,H:547-1013^64.19%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00560.30^LRR_1^Leucine Rich Repeat^4-23^E:1.4`PF00069.22^Pkinase^Protein kinase domain^158-429^E:3.7e-42`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^158-432^E:5.9e-37",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT4G28650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0030154^biological_process^cell differentiation`GO:0010067^biological_process^procambium histogenesis`GO:0001944^biological_process^vasculature development","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46035_c1_g3","leaves S. yangii","roots S. yangii",1.61427646285553,"0.00679361525470153","0.00905156765553762","TRINITY_DN46035_c1_g3_i1","WAKLH_ARATH^WAKLH_ARATH^Q:2-490,H:35-221^29.7%ID^E:7e-10^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46035_c1_g3_i1.p1","2-493[+]","WAKLH_ARATH^WAKLH_ARATH^Q:1-163,H:35-221^29.7%ID^E:6e-10^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13947.3^GUB_WAK_bind^Wall-associated receptor kinase galacturonan-binding^1-110^E:1.6e-16",".",".",".","KEGG:ath:AT1G69730","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030247^molecular_function^polysaccharide binding",".","."]
["TRINITY_DN43418_c1_g6","leaves S. yangii","roots S. yangii",1.61395920762292,"0.000162017147118778","0.000243195306184153","TRINITY_DN43418_c1_g6_i1","Y4919_ARATH^Y4919_ARATH^Q:846-1136,H:166-293^45.31%ID^E:4e-19^RecName: Full=Uncharacterized zinc finger CCHC domain-containing protein At4g19190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43418_c1_g6_i1.p1","3-1508[+]","Y4919_ARATH^Y4919_ARATH^Q:234-378,H:113-293^41.94%ID^E:4e-24^RecName: Full=Uncharacterized zinc finger CCHC domain-containing protein At4g19190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZVMR^corepressor interacting with RBPJ, 1","KEGG:ath:AT4G19190","GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding",".",".","."]
["TRINITY_DN41499_c0_g1","leaves S. yangii","roots S. yangii",1.59367271139437,"0.000837335811317884","0.00119634383836229","TRINITY_DN41499_c0_g1_i1","7SBG2_SOYBN^7SBG2_SOYBN^Q:256-1392,H:41-404^29.2%ID^E:3e-40^RecName: Full=Basic 7S globulin 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN41499_c0_g1_i1.p1","175-1476[+]","7SBG2_SOYBN^7SBG2_SOYBN^Q:28-432,H:41-432^30.12%ID^E:5e-46^RecName: Full=Basic 7S globulin 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^41-215^E:5.3e-23`PF14541.3^TAXi_C^Xylanase inhibitor C-terminal^256-415^E:8.3e-45","sigP:1^23^0.731^YES",".","ENOG410XNV7^aspartic","KEGG:gmx:547485","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0045735^molecular_function^nutrient reservoir activity`GO:0030163^biological_process^protein catabolic process`GO:0006508^biological_process^proteolysis",".",".","."]
["TRINITY_DN44977_c1_g3","leaves S. yangii","roots S. yangii",1.58763876004452,"0.000185669049274951","0.000277850355432568","TRINITY_DN44977_c1_g3_i2","PP419_ARATH^PP419_ARATH^Q:2274-688,H:48-576^53.4%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g46460, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP419_ARATH^PP419_ARATH^Q:565-170,H:560-697^42.76%ID^E:6e-18^RecName: Full=Pentatricopeptide repeat-containing protein At5g46460, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44977_c1_g3_i2.p1","622-2391[-]","PP419_ARATH^PP419_ARATH^Q:40-568,H:48-576^53.38%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g46460, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^64-84^E:0.42`PF01535.17^PPR^PPR repeat^91-121^E:1.2e-07`PF12854.4^PPR_1^PPR repeat^120-147^E:6.8e-06`PF01535.17^PPR^PPR repeat^122-148^E:8.9e-08`PF12854.4^PPR_1^PPR repeat^151-178^E:1.9e-05`PF01535.17^PPR^PPR repeat^154-183^E:4.1e-05`PF13041.3^PPR_2^PPR repeat family^182-230^E:3.7e-08`PF01535.17^PPR^PPR repeat^184-214^E:0.00076`PF13812.3^PPR_3^Pentatricopeptide repeat domain^280-325^E:0.0041`PF13041.3^PPR_2^PPR repeat family^282-327^E:3.7e-09`PF01535.17^PPR^PPR repeat^285-315^E:4.1e-06`PF13041.3^PPR_2^PPR repeat family^383-430^E:5e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^384-430^E:0.0012`PF01535.17^PPR^PPR repeat^386-416^E:4.4e-05`PF01535.17^PPR^PPR repeat^421-448^E:0.24`PF01535.17^PPR^PPR repeat^459-483^E:0.0094",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G46460","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN122923_c0_g1","leaves S. yangii","roots S. yangii",1.56532344583309,{"v":8261252991.92896,"d":"8.26E+09"},"0.000126232589555193","TRINITY_DN122923_c0_g1_i1","U89B1_ARATH^U89B1_ARATH^Q:3-290,H:375-469^43.75%ID^E:1e-20^RecName: Full=UDP-glycosyltransferase 89B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN122923_c0_g1_i1.p1","36-305[+]","U89B1_ARATH^U89B1_ARATH^Q:1-85,H:386-469^41.18%ID^E:6e-14^RecName: Full=UDP-glycosyltransferase 89B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1819^Transferase","KEGG:ath:AT1G73880","GO:0043231^cellular_component^intracellular membrane-bounded organelle`GO:0047893^molecular_function^flavonol 3-O-glucosyltransferase activity`GO:0080043^molecular_function^quercetin 3-O-glucosyltransferase activity`GO:0080046^molecular_function^quercetin 4'-O-glucosyltransferase activity`GO:0080044^molecular_function^quercetin 7-O-glucosyltransferase activity`GO:0035251^molecular_function^UDP-glucosyltransferase activity`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0052696^biological_process^flavonoid glucuronidation",".",".","."]
["TRINITY_DN44255_c6_g3","leaves S. yangii","roots S. yangii",1.53773428280514,"0.00317579208204182","0.00434567492316912","TRINITY_DN44255_c6_g3_i2","SBT24_ARATH^SBT24_ARATH^Q:9-674,H:473-694^63.06%ID^E:2e-85^RecName: Full=Subtilisin-like protease SBT2.4 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44255_c6_g3_i2.p1","3-674[+]","SBT24_ARATH^SBT24_ARATH^Q:3-224,H:473-694^63.06%ID^E:6e-93^RecName: Full=Subtilisin-like protease SBT2.4 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00082.19^Peptidase_S8^Subtilase family^86-188^E:1.9e-20","sigP:1^25^0.479^YES",".","ENOG410YDJ9^Subtilase family","KEGG:ath:AT1G62340","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0042335^biological_process^cuticle development","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN35416_c0_g1","leaves S. yangii","roots S. yangii",1.53052738696427,"0.00072863313661275","0.00104520018270555","TRINITY_DN35416_c0_g1_i1","PPR85_ARATH^PPR85_ARATH^Q:116-646,H:49-224^34.97%ID^E:8e-24^RecName: Full=Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR85_ARATH^PPR85_ARATH^Q:167-655,H:172-330^24.26%ID^E:3e-08^RecName: Full=Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35416_c0_g1_i1.p1","2-655[+]","PPR85_ARATH^PPR85_ARATH^Q:39-215,H:49-224^34.97%ID^E:7e-24^RecName: Full=Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR85_ARATH^PPR85_ARATH^Q:56-218,H:172-330^24.26%ID^E:2e-08^RecName: Full=Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G59720","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0004519^molecular_function^endonuclease activity`GO:0016556^biological_process^mRNA modification`GO:0006397^biological_process^mRNA processing`GO:0090305^biological_process^nucleic acid phosphodiester bond hydrolysis",".",".","."]
["TRINITY_DN47440_c0_g1","leaves S. yangii","roots S. yangii",1.50493786417503,"0.00167836411598251","0.00234313672978956","TRINITY_DN47440_c0_g1_i4","R1C3_SOLDE^R1C3_SOLDE^Q:410-3,H:1068-1202^33.33%ID^E:5e-07^RecName: Full=Putative late blight resistance protein homolog R1C-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47440_c0_g1_i4.p1","3-488[-]","R1B16_SOLDE^R1B16_SOLDE^Q:27-162,H:1087-1221^31.88%ID^E:2e-06^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46691_c3_g1","leaves S. yangii","roots S. yangii",1.49232674606688,"0.000906571548753081","0.0012912946017088","TRINITY_DN46691_c3_g1_i1","SCP40_ARATH^SCP40_ARATH^Q:375-1,H:49-179^68.7%ID^E:1e-56^RecName: Full=Serine carboxypeptidase-like 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46691_c3_g1_i1.p1","1-465[-]","SCP40_ARATH^SCP40_ARATH^Q:31-155,H:49-179^68.7%ID^E:7e-57^RecName: Full=Serine carboxypeptidase-like 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^62-155^E:5.5e-38","sigP:1^16^0.785^YES",".","COG2939^carboxy-peptidase","KEGG:ath:AT3G63470`KO:K16297","GO:0005576^cellular_component^extracellular region`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN47259_c1_g8","leaves S. yangii","roots S. yangii",1.48774627071436,"0.000819929122410083","0.00117234168505033","TRINITY_DN47259_c1_g8_i1","PPR37_ARATH^PPR37_ARATH^Q:29-517,H:443-605^38.65%ID^E:2e-31^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:11-517,H:297-465^28.4%ID^E:3e-22^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:17-517,H:229-395^29.94%ID^E:8e-21^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:77-517,H:214-360^29.93%ID^E:1e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:20-514,H:265-429^27.88%ID^E:2e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:11-529,H:332-501^28.32%ID^E:2e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:44-514,H:378-534^28.03%ID^E:2e-17^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:32-517,H:94-255^27.16%ID^E:3e-16^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:68-514,H:141-289^32.89%ID^E:5e-16^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:29-418,H:478-607^28.46%ID^E:1e-13^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:20-313,H:510-607^29.59%ID^E:9e-08^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47259_c1_g8_i1.p1","44-595[+]","PPR37_ARATH^PPR37_ARATH^Q:1-158,H:448-605^38.61%ID^E:7e-31^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-169,H:238-403^30.18%ID^E:4e-21^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:12-158,H:214-360^29.93%ID^E:1e-19^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-176,H:308-483^25%ID^E:6e-19^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-176,H:378-588^25.59%ID^E:2e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-162,H:343-501^29.01%ID^E:2e-17^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-157,H:273-429^28.03%ID^E:2e-17^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:9-157,H:141-289^32.89%ID^E:4e-16^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-158,H:98-255^26.58%ID^E:2e-15^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR37_ARATH^PPR37_ARATH^Q:1-125,H:483-607^28.8%ID^E:5e-13^RecName: Full=Pentatricopeptide repeat-containing protein At1g12620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^1-50^E:0.00013`PF12854.4^PPR_1^PPR repeat^6-37^E:6e-11`PF13041.3^PPR_2^PPR repeat family^9-48^E:8.7e-09`PF01535.17^PPR^PPR repeat^11-40^E:8.5e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^32-88^E:4.7e-07`PF12854.4^PPR_1^PPR repeat^39-71^E:2.3e-08`PF13041.3^PPR_2^PPR repeat family^43-83^E:2.9e-09`PF01535.17^PPR^PPR repeat^46-76^E:1.2e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^67-123^E:2.7e-09`PF12854.4^PPR_1^PPR repeat^74-107^E:2.5e-08`PF13041.3^PPR_2^PPR repeat family^78-126^E:4.5e-14`PF01535.17^PPR^PPR repeat^82-111^E:8e-07`PF13041.3^PPR_2^PPR repeat family^113-158^E:4.4e-07`PF01535.17^PPR^PPR repeat^116-144^E:1.4",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12620",".",".",".","."]
["TRINITY_DN40354_c0_g1","leaves S. yangii","roots S. yangii",1.48033748770669,"0.000130389730899831","0.000196815871927232","TRINITY_DN40354_c0_g1_i1","PP333_ARATH^PP333_ARATH^Q:2391-145,H:32-784^32.02%ID^E:2e-130^RecName: Full=Pentatricopeptide repeat-containing protein At4g21300;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40354_c0_g1_i1.p1","127-2490[-]","PP333_ARATH^PP333_ARATH^Q:34-787,H:32-789^31.94%ID^E:7e-133^RecName: Full=Pentatricopeptide repeat-containing protein At4g21300;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^101-130^E:0.29`PF01535.17^PPR^PPR repeat^173-199^E:0.97`PF13812.3^PPR_3^Pentatricopeptide repeat domain^198-244^E:7e-06`PF13041.3^PPR_2^PPR repeat family^199-246^E:6.8e-10`PF01535.17^PPR^PPR repeat^201-217^E:0.063`PF01535.17^PPR^PPR repeat^308-332^E:0.0022`PF01535.17^PPR^PPR repeat^377-398^E:1.2`PF01535.17^PPR^PPR repeat^407-430^E:0.063`PF01535.17^PPR^PPR repeat^506-534^E:0.0062`PF01535.17^PPR^PPR repeat^579-605^E:0.16`PF01535.17^PPR^PPR repeat^609-637^E:2.2e-07`PF13041.3^PPR_2^PPR repeat family^609-653^E:5.9e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^629-676^E:0.0085`PF01535.17^PPR^PPR repeat^643-671^E:0.0045`PF01535.17^PPR^PPR repeat^680-703^E:0.0052",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G21300",".",".",".","."]
["TRINITY_DN44849_c1_g2","leaves S. yangii","roots S. yangii",1.45210663578928,"0.000211476221225156","0.000315229701108726","TRINITY_DN44849_c1_g2_i1","CRK21_ARATH^CRK21_ARATH^Q:271-59,H:580-651^47.22%ID^E:6e-14^RecName: Full=Cysteine-rich receptor-like protein kinase 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44849_c1_g2_i1.p1","2-400[-]","CRK21_ARATH^CRK21_ARATH^Q:44-114,H:580-651^47.22%ID^E:5e-14^RecName: Full=Cysteine-rich receptor-like protein kinase 21;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G23290","GO:0016021^cellular_component^integral component of membrane`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0042742^biological_process^defense response to bacterium`GO:0006468^biological_process^protein phosphorylation",".",".","."]
["TRINITY_DN42011_c1_g1","leaves S. yangii","roots S. yangii",1.44818284690357,"0.000300352050267548","0.000442973381142124","TRINITY_DN42011_c1_g1_i2","Y3720_ARATH^Y3720_ARATH^Q:530-1864,H:39-460^28.21%ID^E:4e-53^RecName: Full=UPF0481 protein At3g47200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42011_c1_g1_i2.p1","461-1876[+]","Y3720_ARATH^Y3720_ARATH^Q:24-468,H:39-460^28.42%ID^E:2e-55^RecName: Full=UPF0481 protein At3g47200;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03140.12^DUF247^Plant protein of unknown function^33-453^E:3.2e-103",".",".",".","KEGG:ath:AT3G47200","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN45166_c2_g2","leaves S. yangii","roots S. yangii",1.44684240774156,{"v":7092075055.74352,"d":"7.09E+09"},"0.000108904555833653","TRINITY_DN45166_c2_g2_i1","BAK1_ARATH^BAK1_ARATH^Q:1360-635,H:266-518^66.14%ID^E:8e-99^RecName: Full=BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BAK1_ARATH^BAK1_ARATH^Q:609-361,H:517-607^43.48%ID^E:8e-99^RecName: Full=BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45166_c2_g2_i1.p1","632-1171[-]","BAK1_ARATH^BAK1_ARATH^Q:1-179,H:337-518^69.4%ID^E:4e-78^RecName: Full=BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^1-151^E:1.4e-26`PF00069.22^Pkinase^Protein kinase domain^3-153^E:7.3e-27",".",".",".",".","GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0033612^molecular_function^receptor serine/threonine kinase binding`GO:0004714^molecular_function^transmembrane receptor protein tyrosine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN37310_c0_g1","leaves S. yangii","roots S. yangii",1.43977680717382,"0.0016692540334943","0.00233093696998513","TRINITY_DN37310_c0_g1_i1","MUTYH_ARATH^MUTYH_ARATH^Q:160-1245,H:117-493^61.46%ID^E:4e-139^RecName: Full=Adenine DNA glycosylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37310_c0_g1_i1.p1","1-1305[+]","MUTYH_ARATH^MUTYH_ARATH^Q:54-420,H:117-498^60.93%ID^E:5e-154^RecName: Full=Adenine DNA glycosylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00730.22^HhH-GPD^HhH-GPD superfamily base excision DNA repair protein^110-241^E:5.6e-21`PF14815.3^NUDIX_4^NUDIX domain^327-407^E:5.7e-13",".",".","COG1194^a g-specific adenine glycosylase","KEGG:ath:AT4G12740`KO:K03575","GO:0005634^cellular_component^nucleus`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0003677^molecular_function^DNA binding`GO:0016798^molecular_function^hydrolase activity, acting on glycosyl bonds`GO:0046872^molecular_function^metal ion binding`GO:0006284^biological_process^base-excision repair","GO:0006284^biological_process^base-excision repair",".","."]
["TRINITY_DN87278_c0_g1","leaves S. yangii","roots S. yangii",1.43221481303124,"0.000854816930585158","0.00122020850292731","TRINITY_DN87278_c0_g1_i1","PII2_ARATH^PII2_ARATH^Q:177-1259,H:29-382^37.84%ID^E:6e-48^RecName: Full=Piriformospora indica-insensitive protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87278_c0_g1_i1.p1","96-1493[+]","PII2_ARATH^PII2_ARATH^Q:28-407,H:29-401^37.79%ID^E:5e-58^RecName: Full=Piriformospora indica-insensitive protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^199-258^E:2.2e-08","sigP:1^28^0.671^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G13230","GO:0009507^cellular_component^chloroplast`GO:0005886^cellular_component^plasma membrane`GO:0009610^biological_process^response to symbiotic fungus`GO:0044403^biological_process^symbiosis, encompassing mutualism through parasitism","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN23614_c0_g1","leaves S. yangii","roots S. yangii",1.42042219063323,"0.000510715958964788","0.000741462900970747","TRINITY_DN23614_c0_g1_i2","YSL7_ARATH^YSL7_ARATH^Q:201-2198,H:16-685^70.54%ID^E:0^RecName: Full=Probable metal-nicotianamine transporter YSL7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN23614_c0_g1_i2.p1","147-2207[+]","YSL7_ARATH^YSL7_ARATH^Q:14-684,H:9-685^70.54%ID^E:0^RecName: Full=Probable metal-nicotianamine transporter YSL7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03169.12^OPT^OPT oligopeptide transporter protein^45-658^E:2e-149",".",".","COG1297^oligo-peptide transporter","KEGG:ath:AT1G65730","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0055085^biological_process^transmembrane transport","GO:0055085^biological_process^transmembrane transport",".","."]
["TRINITY_DN21549_c0_g1","leaves S. yangii","roots S. yangii",1.41615021488033,"0.000365958771438735","0.000536611237395647","TRINITY_DN21549_c0_g1_i1","PP220_ARATH^PP220_ARATH^Q:429-3113,H:132-976^30.34%ID^E:1e-124^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:624-2756,H:79-754^27.96%ID^E:8e-74^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:390-2177,H:268-861^25.71%ID^E:1e-58^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:345-1823,H:354-847^26.96%ID^E:1e-55^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:2016-2948,H:47-346^24.84%ID^E:1e-18^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN21549_c0_g1_i1.p1","165-3119[+]","PP220_ARATH^PP220_ARATH^Q:89-983,H:132-976^30.34%ID^E:6e-126^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:154-864,H:79-754^28.29%ID^E:5e-74^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:76-671,H:268-861^25.71%ID^E:5e-59^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:61-553,H:354-847^26.96%ID^E:5e-56^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:618-928,H:47-346^24.84%ID^E:1e-18^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP220_ARATH^PP220_ARATH^Q:559-907,H:78-392^22.66%ID^E:1e-13^RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^203-228^E:0.00022`PF13812.3^PPR_3^Pentatricopeptide repeat domain^301-349^E:0.011`PF01535.17^PPR^PPR repeat^377-402^E:0.013`PF01535.17^PPR^PPR repeat^408-436^E:0.0021`PF13041.3^PPR_2^PPR repeat family^504-548^E:6.5e-09`PF01535.17^PPR^PPR repeat^507-537^E:1.1e-07`PF01535.17^PPR^PPR repeat^580-606^E:0.99`PF01535.17^PPR^PPR repeat^608-636^E:0.85`PF13041.3^PPR_2^PPR repeat family^705-751^E:6.7e-08`PF01535.17^PPR^PPR repeat^708-737^E:0.052`PF13812.3^PPR_3^Pentatricopeptide repeat domain^729-787^E:0.00042`PF01535.17^PPR^PPR repeat^780-802^E:0.15`PF13041.3^PPR_2^PPR repeat family^806-853^E:7.3e-09`PF01535.17^PPR^PPR repeat^808-837^E:1.7e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^829-887^E:0.011`PF01535.17^PPR^PPR repeat^843-873^E:0.0021`PF01535.17^PPR^PPR repeat^880-905^E:0.29",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G09040","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN57877_c0_g1","leaves S. yangii","roots S. yangii",1.40378597232429,"0.000818080981436176","0.00116983249630326","TRINITY_DN57877_c0_g1_i1","PP147_ARATH^PP147_ARATH^Q:1807-482,H:98-540^34.37%ID^E:6e-78^RecName: Full=Pentatricopeptide repeat-containing protein At2g03880, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP147_ARATH^PP147_ARATH^Q:1510-770,H:97-335^26.32%ID^E:7e-19^RecName: Full=Pentatricopeptide repeat-containing protein At2g03880, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN57877_c0_g1_i1.p1","419-1900[-]","PP147_ARATH^PP147_ARATH^Q:32-491,H:98-565^33.82%ID^E:7e-86^RecName: Full=Pentatricopeptide repeat-containing protein At2g03880, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP147_ARATH^PP147_ARATH^Q:131-377,H:97-335^26.32%ID^E:2e-19^RecName: Full=Pentatricopeptide repeat-containing protein At2g03880, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^33-55^E:0.6`PF01535.17^PPR^PPR repeat^135-159^E:0.087`PF01535.17^PPR^PPR repeat^162-191^E:5.6e-05`PF01535.17^PPR^PPR repeat^235-257^E:0.00015`PF13812.3^PPR_3^Pentatricopeptide repeat domain^256-295^E:0.0017`PF13041.3^PPR_2^PPR repeat family^262-308^E:5.2e-09`PF01535.17^PPR^PPR repeat^266-294^E:0.00021`PF13812.3^PPR_3^Pentatricopeptide repeat domain^286-346^E:0.00022`PF01535.17^PPR^PPR repeat^336-356^E:0.0073`PF01535.17^PPR^PPR repeat^399-428^E:0.029",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G03880","GO:0005739^cellular_component^mitochondrion`GO:0009451^biological_process^RNA modification",".",".","."]
["TRINITY_DN46885_c3_g5","leaves S. yangii","roots S. yangii",1.40238837621533,"0.000215691069473749","0.000321245286617994","TRINITY_DN46885_c3_g5_i1","TMK1_ARATH^TMK1_ARATH^Q:377-3115,H:25-942^73.64%ID^E:0^RecName: Full=Receptor protein kinase TMK1 {ECO:0000303|PubMed:1332795};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46885_c3_g5_i1.p1","281-3118[+]","TMK1_ARATH^TMK1_ARATH^Q:33-945,H:25-942^73.75%ID^E:0^RecName: Full=Receptor protein kinase TMK1 {ECO:0000303|PubMed:1332795};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^34-68^E:2.3e-06`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^335-367^E:0.019`PF13855.3^LRR_8^Leucine rich repeat^388-429^E:3.6e-08`PF12799.4^LRR_4^Leucine Rich repeats (2 copies)^393-436^E:1.7e-06`PF00069.22^Pkinase^Protein kinase domain^593-866^E:2.9e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^595-821^E:4.4e-45","sigP:1^30^0.617^YES",".","ENOG41102Z7^receptor protein kinase","KEGG:ath:AT1G66150`KO:K00924","GO:0005576^cellular_component^extracellular region`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004675^molecular_function^transmembrane receptor protein serine/threonine kinase activity`GO:0007165^biological_process^signal transduction`GO:0007178^biological_process^transmembrane receptor protein serine/threonine kinase signaling pathway","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43424_c0_g1","leaves S. yangii","roots S. yangii",1.39246323573904,"0.0020090568987997","0.00278852341863156","TRINITY_DN43424_c0_g1_i3","SYT3_ARATH^SYT3_ARATH^Q:1722-283,H:62-537^56.96%ID^E:0^RecName: Full=Synaptotagmin-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43424_c0_g1_i3.p1","271-1908[-]","SYT3_ARATH^SYT3_ARATH^Q:1-542,H:1-537^55.25%ID^E:0^RecName: Full=Synaptotagmin-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF17047.2^SMP_LBD^Synaptotagmin-like mitochondrial-lipid-binding domain^68-231^E:1.4e-12`PF00168.27^C2^C2 domain^262-359^E:1.1e-23`PF00168.27^C2^C2 domain^426-528^E:3.2e-18",".",".","COG5038^Domain-Containing protein","KEGG:ath:AT5G04220","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0008289^molecular_function^lipid binding`GO:0046872^molecular_function^metal ion binding","GO:0008289^molecular_function^lipid binding`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN42467_c0_g1","leaves S. yangii","roots S. yangii",1.38259517517904,"0.00114356241155025","0.00161601679600569","TRINITY_DN42467_c0_g1_i1","PP242_ARATH^PP242_ARATH^Q:229-2238,H:1-670^49.18%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g18840;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP242_ARATH^PP242_ARATH^Q:184-1647,H:122-576^25.3%ID^E:2e-40^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g18840;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42467_c0_g1_i1.p1","229-2316[+]","PP242_ARATH^PP242_ARATH^Q:1-670,H:1-670^49.18%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g18840;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^24-54^E:0.0017`PF01535.17^PPR^PPR repeat^55-78^E:0.0016`PF13041.3^PPR_2^PPR repeat family^83-135^E:6.6e-08`PF01535.17^PPR^PPR repeat^86-113^E:0.089`PF01535.17^PPR^PPR repeat^196-215^E:0.094`PF13041.3^PPR_2^PPR repeat family^223-269^E:8.6e-11`PF01535.17^PPR^PPR repeat^225-254^E:3.6e-09`PF01535.17^PPR^PPR repeat^328-355^E:0.007`PF01535.17^PPR^PPR repeat^357-381^E:0.00069`PF13041.3^PPR_2^PPR repeat family^459-505^E:3.2e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^459-505^E:6.6e-05`PF01535.17^PPR^PPR repeat^461-491^E:6.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^481-542^E:2.7e-06`PF01535.17^PPR^PPR repeat^496-523^E:0.4`PF01535.17^PPR^PPR repeat^534-558^E:0.057",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G18840",".",".",".","."]
["TRINITY_DN46836_c1_g6","leaves S. yangii","roots S. yangii",1.37548388731694,{"v":9280329160.98603,"d":"9.28E+09"},"0.000141228027787342","TRINITY_DN46836_c1_g6_i1","BH137_ARATH^BH137_ARATH^Q:669-169,H:133-286^54.44%ID^E:7e-50^RecName: Full=Transcription factor bHLH137;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46836_c1_g6_i1.p1","160-1065[-]","BH137_ARATH^BH137_ARATH^Q:88-299,H:95-286^50.47%ID^E:8e-56^RecName: Full=Transcription factor bHLH137;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^146-193^E:2e-06",".",".","ENOG410YIH7^Transcription factor","KEGG:ath:AT5G50915","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009739^biological_process^response to gibberellin`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN46414_c1_g1","leaves S. yangii","roots S. yangii",1.37543534213606,"0.000929865933377005","0.00132344085291099","TRINITY_DN46414_c1_g1_i3","P2C44_ARATH^P2C44_ARATH^Q:578-120,H:33-168^38.31%ID^E:5e-24^RecName: Full=Putative protein phosphatase 2C-like protein 44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46414_c1_g1_i3.p1","57-674[-]","P2C44_ARATH^P2C44_ARATH^Q:7-185,H:10-168^36.67%ID^E:1e-27^RecName: Full=Putative protein phosphatase 2C-like protein 44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00481.18^PP2C^Protein phosphatase 2C^75-180^E:1.4e-06",".",".","COG0631^Phosphatase","KEGG:ath:AT3G23360","GO:0004722^molecular_function^protein serine/threonine phosphatase activity","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN47563_c1_g4","leaves S. yangii","roots S. yangii",1.37532740872054,"0.00158099579030984","0.00221175485554467","TRINITY_DN47563_c1_g4_i1","LABER_LAVAN^LABER_LAVAN^Q:1894-299,H:2-530^72.05%ID^E:0^RecName: Full=Exo-alpha-bergamotene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Lavanduleae; Lavandula",".","TRINITY_DN47563_c1_g4_i1.p1","278-1900[-]","LABER_LAVAN^LABER_LAVAN^Q:3-539,H:2-535^71.93%ID^E:0^RecName: Full=Exo-alpha-bergamotene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Lavanduleae; Lavandula","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^14-190^E:7.3e-52`PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^222-484^E:9.2e-98",".",".",".","KEGG:ag:ABB73046","GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN43800_c4_g9","leaves S. yangii","roots S. yangii",1.37160229356888,"0.0113034529478027","0.014770892851949","TRINITY_DN43800_c4_g9_i1","PP369_ARATH^PP369_ARATH^Q:1759-215,H:14-530^53.97%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g08305;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43800_c4_g9_i1.p1","200-1822[-]","PP369_ARATH^PP369_ARATH^Q:22-536,H:14-530^53.97%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g08305;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^81-124^E:0.008`PF01535.17^PPR^PPR repeat^83-112^E:0.013`PF01535.17^PPR^PPR repeat^153-181^E:5.4e-05`PF01535.17^PPR^PPR repeat^183-212^E:1.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^211-255^E:0.0042`PF13041.3^PPR_2^PPR repeat family^212-258^E:1.5e-08`PF01535.17^PPR^PPR repeat^214-243^E:8e-07`PF01535.17^PPR^PPR repeat^287-310^E:0.028`PF13812.3^PPR_3^Pentatricopeptide repeat domain^313-361^E:0.0042`PF13041.3^PPR_2^PPR repeat family^315-362^E:3.6e-12`PF01535.17^PPR^PPR repeat^319-347^E:4.1e-06`PF01535.17^PPR^PPR repeat^352-381^E:0.0065`PF01535.17^PPR^PPR repeat^389-413^E:0.0031",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G08305",".",".",".","."]
["TRINITY_DN42362_c0_g1","leaves S. yangii","roots S. yangii",1.35873570673381,"0.0155310338856783","0.0200548920192942","TRINITY_DN42362_c0_g1_i1","PP449_ARATH^PP449_ARATH^Q:1263-61,H:221-620^47.01%ID^E:5e-133^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP449_ARATH^PP449_ARATH^Q:1068-625,H:185-328^29.53%ID^E:7e-12^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42362_c0_g1_i1.p1","58-1212[-]","PP425_ARATH^PP425_ARATH^Q:1-384,H:265-646^47.14%ID^E:3e-128^RecName: Full=Pentatricopeptide repeat-containing protein At5g48910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP425_ARATH^PP425_ARATH^Q:47-195,H:210-356^29.8%ID^E:2e-14^RecName: Full=Pentatricopeptide repeat-containing protein At5g48910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP425_ARATH^PP425_ARATH^Q:42-134,H:51-149^35.64%ID^E:8e-07^RecName: Full=Pentatricopeptide repeat-containing protein At5g48910;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^48-73^E:7.5e-05`PF13041.3^PPR_2^PPR repeat family^77-124^E:8.2e-08`PF01535.17^PPR^PPR repeat^79-109^E:1.1e-05`PF01535.17^PPR^PPR repeat^114-142^E:0.024`PF01535.17^PPR^PPR repeat^151-175^E:0.031`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^250-374^E:1.4e-39",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G48910","GO:0009507^cellular_component^chloroplast`GO:0009451^biological_process^RNA modification","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN44656_c1_g3","leaves S. yangii","roots S. yangii",1.34847521435989,"0.000274363859415763","0.00040564601248368","TRINITY_DN44656_c1_g3_i4","FRS1_ARATH^FRS1_ARATH^Q:72-470,H:379-507^30.37%ID^E:2e-09^RecName: Full=Protein FAR1-RELATED SEQUENCE 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44656_c1_g3_i4.p1","51-848[+]","FHY3_ARATH^FHY3_ARATH^Q:8-135,H:505-638^32.59%ID^E:5e-15^RecName: Full=Protein FAR-RED ELONGATED HYPOCOTYL 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04434.14^SWIM^SWIM zinc finger^67-99^E:0.00067",".",".","ENOG410ZJSX^protein FAR1-RELATED SEQUENCE 5-like","KEGG:ath:AT3G22170","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0007623^biological_process^circadian rhythm`GO:0042753^biological_process^positive regulation of circadian rhythm`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0010017^biological_process^red or far-red light signaling pathway`GO:0009585^biological_process^red, far-red light phototransduction`GO:0010218^biological_process^response to far red light`GO:0006351^biological_process^transcription, DNA-templated","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN46202_c4_g3","leaves S. yangii","roots S. yangii",1.34789261527881,"0.000177164903406298","0.000265408931225194","TRINITY_DN46202_c4_g3_i3","R1A6_SOLDE^R1A6_SOLDE^Q:2033-4201,H:523-1242^34.13%ID^E:2e-83^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:5-2008,H:557-1242^32.72%ID^E:1e-80^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46202_c4_g3_i3.p1","452-4219[+]","R1A6_SOLDE^R1A6_SOLDE^Q:528-1250,H:523-1242^34.13%ID^E:1e-91^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:1-519,H:707-1242^32.06%ID^E:1e-55^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-103^E:3.8e-25`PF00931.19^NB-ARC^NB-ARC domain^535-816^E:2.2e-70",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45861_c2_g4","leaves S. yangii","roots S. yangii",1.34518549700453,"0.0022690862985348","0.00314023324958802","TRINITY_DN45861_c2_g4_i2","4CL1_TOBAC^4CL1_TOBAC^Q:1700-99,H:8-541^62.43%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45861_c2_g4_i2.p1","96-1703[-]","4CL1_TOBAC^4CL1_TOBAC^Q:2-535,H:8-541^62.43%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00501.25^AMP-binding^AMP-binding enzyme^35-441^E:1.3e-106`PF13193.3^AMP-binding_C^AMP-binding enzyme C-terminal domain^450-525^E:3.3e-16",".",".",".",".","GO:0016207^molecular_function^4-coumarate-CoA ligase activity`GO:0005524^molecular_function^ATP binding`GO:0009698^biological_process^phenylpropanoid metabolic process","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47097_c2_g6","leaves S. yangii","roots S. yangii",1.33143300225085,"0.00197187895000234","0.00273813280192878","TRINITY_DN47097_c2_g6_i1","PP104_ARATH^PP104_ARATH^Q:102-1289,H:155-551^50%ID^E:5e-121^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g64310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP104_ARATH^PP104_ARATH^Q:147-974,H:68-344^22.02%ID^E:8e-17^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g64310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47097_c2_g6_i1.p1","174-1301[+]","PP104_ARATH^PP104_ARATH^Q:1-372,H:178-551^50%ID^E:5e-123^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g64310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP104_ARATH^PP104_ARATH^Q:1-267,H:77-344^22.88%ID^E:5e-17^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g64310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP104_ARATH^PP104_ARATH^Q:50-297,H:25-271^20.16%ID^E:8e-06^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g64310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^1-26^E:0.004`PF01535.17^PPR^PPR repeat^97-126^E:0.00012`PF01535.17^PPR^PPR repeat^170-197^E:0.00076`PF13812.3^PPR_3^Pentatricopeptide repeat domain^195-242^E:0.0023`PF13041.3^PPR_2^PPR repeat family^196-244^E:2.3e-09`PF01535.17^PPR^PPR repeat^198-228^E:0.00052`PF01535.17^PPR^PPR repeat^234-260^E:0.23",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G64310","GO:0005739^cellular_component^mitochondrion`GO:1900864^biological_process^mitochondrial RNA modification",".",".","."]
["TRINITY_DN41294_c0_g1","leaves S. yangii","roots S. yangii",1.32916107758645,"0.00788145171892085","0.0104337665420709","TRINITY_DN41294_c0_g1_i5","PP306_ARATH^PP306_ARATH^Q:150-1781,H:1-547^54.01%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:420-1316,H:234-563^28.36%ID^E:2e-34^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:846-1784,H:97-373^26.52%ID^E:2e-28^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41294_c0_g1_i5.p1","150-1787[+]","PP306_ARATH^PP306_ARATH^Q:1-544,H:1-547^54.01%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:91-389,H:234-563^28.36%ID^E:2e-35^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP306_ARATH^PP306_ARATH^Q:373-545,H:97-268^28.32%ID^E:9e-13^RecName: Full=Pentatricopeptide repeat-containing protein At4g11690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^127-171^E:4.8e-09`PF01535.17^PPR^PPR repeat^128-153^E:0.016`PF13812.3^PPR_3^Pentatricopeptide repeat domain^156-206^E:5.2e-06`PF13041.3^PPR_2^PPR repeat family^159-207^E:8.6e-13`PF12854.4^PPR_1^PPR repeat^159-186^E:4.1e-07`PF01535.17^PPR^PPR repeat^161-191^E:0.00011`PF13812.3^PPR_3^Pentatricopeptide repeat domain^182-222^E:3.2e-05`PF12854.4^PPR_1^PPR repeat^190-222^E:2.6e-13`PF13041.3^PPR_2^PPR repeat family^193-241^E:2.7e-16`PF01535.17^PPR^PPR repeat^196-225^E:9.8e-10`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^213-296^E:7e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^217-275^E:4.3e-09`PF12854.4^PPR_1^PPR repeat^225-257^E:4e-06`PF01535.17^PPR^PPR repeat^231-260^E:2.6e-05`PF13041.3^PPR_2^PPR repeat family^233-277^E:6.2e-11`PF12854.4^PPR_1^PPR repeat^260-292^E:2.3e-11`PF13041.3^PPR_2^PPR repeat family^263-312^E:2.8e-20`PF13812.3^PPR_3^Pentatricopeptide repeat domain^263-308^E:3.6e-09`PF01535.17^PPR^PPR repeat^267-296^E:4e-09`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^281-392^E:3.9e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^287-343^E:4.8e-12`PF12854.4^PPR_1^PPR repeat^294-327^E:1.2e-11`PF13041.3^PPR_2^PPR repeat family^299-347^E:1.4e-16`PF01535.17^PPR^PPR repeat^301-331^E:6.5e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^321-380^E:1.4e-12`PF12854.4^PPR_1^PPR repeat^330-360^E:5.3e-10`PF13041.3^PPR_2^PPR repeat family^333-381^E:2.1e-16`PF01535.17^PPR^PPR repeat^336-366^E:2.1e-08`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^354-476^E:3.2e-10`PF13041.3^PPR_2^PPR repeat family^368-416^E:6.6e-13`PF01535.17^PPR^PPR repeat^371-401^E:2.4e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^394-448^E:3.9e-09`PF12854.4^PPR_1^PPR repeat^399-432^E:7.1e-08`PF01535.17^PPR^PPR repeat^406-435^E:3.1e-05`PF13041.3^PPR_2^PPR repeat family^408-452^E:2.9e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^431-483^E:2.4e-07`PF12854.4^PPR_1^PPR repeat^435-466^E:5.4e-10`PF01535.17^PPR^PPR repeat^441-468^E:0.00018`PF12854.4^PPR_1^PPR repeat^471-501^E:1.3e-08`PF13041.3^PPR_2^PPR repeat family^473-519^E:9.8e-12`PF01535.17^PPR^PPR repeat^476-505^E:3.5e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^496-545^E:0.00017",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G11690","GO:0005739^cellular_component^mitochondrion`GO:0080156^biological_process^mitochondrial mRNA modification`GO:0009737^biological_process^response to abscisic acid",".",".","."]
["TRINITY_DN44488_c2_g1","leaves S. yangii","roots S. yangii",1.32543359080532,"0.00107365164679531","0.0015208196493749","TRINITY_DN44488_c2_g1_i1","OFP3_ARATH^OFP3_ARATH^Q:1100-144,H:5-290^34.26%ID^E:2e-33^RecName: Full=Transcription repressor OFP3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44488_c2_g1_i1.p1","132-1100[-]","OFP3_ARATH^OFP3_ARATH^Q:1-319,H:5-290^35.78%ID^E:1e-40^RecName: Full=Transcription repressor OFP3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13724.3^DNA_binding_2^DNA-binding domain^1-41^E:2.1e-19`PF04844.10^Ovate^Transcriptional repressor, ovate^261-317^E:5.6e-24",".",".","ENOG410YV5M^DUF623 domain containing protein, expressed","KEGG:ath:AT5G58360","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN37649_c0_g1","leaves S. yangii","roots S. yangii",1.3253187154719,"0.00606314658661712","0.00811264271367793","TRINITY_DN37649_c0_g1_i1","BAP2_ARATH^BAP2_ARATH^Q:764-402,H:9-135^51.16%ID^E:1e-28^RecName: Full=BON1-associated protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37649_c0_g1_i1.p1","273-785[-]","BAP2_ARATH^BAP2_ARATH^Q:8-128,H:9-135^51.16%ID^E:1e-29^RecName: Full=BON1-associated protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^8-92^E:2.7e-06",".",".","ENOG410ZCTQ^bon association protein","KEGG:ath:AT2G45760","GO:0016020^cellular_component^membrane`GO:0006952^biological_process^defense response","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43142_c0_g1","leaves S. yangii","roots S. yangii",1.3210585139084,"0.0372383578594653","0.0462388713493217","TRINITY_DN43142_c0_g1_i1","CACLC_ARATH^CACLC_ARATH^Q:789-2720,H:7-647^62.58%ID^E:0^RecName: Full=Anoctamin-like protein At1g73020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43142_c0_g1_i1.p1","768-2771[+]","CACLC_ARATH^CACLC_ARATH^Q:8-651,H:7-647^62.58%ID^E:0^RecName: Full=Anoctamin-like protein At1g73020;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04547.9^Anoctamin^Calcium-activated chloride channel^190-631^E:1.1e-92",".",".","ENOG410XPYE^Anoctamin","KEGG:ath:AT1G73020","GO:0034707^cellular_component^chloride channel complex`GO:0005254^molecular_function^chloride channel activity",".",".","."]
["TRINITY_DN47684_c1_g5","leaves S. yangii","roots S. yangii",1.30271084175066,"0.000369366695257255","0.000541481779553483","TRINITY_DN47684_c1_g5_i8","RPOA_SOLTU^RPOA_SOLTU^Q:7331-8335,H:1-337^86.35%ID^E:0^RecName: Full=DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47684_c1_g5_i8.p1","7331-8338[+]","RPOA_SOLTU^RPOA_SOLTU^Q:1-335,H:1-337^86.35%ID^E:0^RecName: Full=DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01193.21^RNA_pol_L^RNA polymerase Rpb3/Rpb11 dimerisation domain^36-225^E:1.7e-14`PF01000.23^RNA_pol_A_bac^RNA polymerase Rpb3/RpoA insert domain^68-157^E:5.3e-15`PF03118.12^RNA_pol_A_CTD^Bacterial RNA polymerase, alpha chain C terminal domain^262-323^E:7.1e-14",".",".","COG0202^DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)","KEGG:sot:102583377`KEGG:sot:4099876`KO:K03040","GO:0009507^cellular_component^chloroplast`GO:0003677^molecular_function^DNA binding`GO:0003899^molecular_function^DNA-directed RNA polymerase activity`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity`GO:0006351^biological_process^transcription, DNA-templated`GO:0003899^molecular_function^DNA-directed RNA polymerase activity`GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN43262_c0_g1","leaves S. yangii","roots S. yangii",1.30153970534434,"0.0145784361406423","0.0188801957573309","TRINITY_DN43262_c0_g1_i6","HTR12_ARATH^HTR12_ARATH^Q:798-388,H:41-178^56.52%ID^E:5e-34^RecName: Full=Histone H3-like centromeric protein HTR12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43262_c0_g1_i6.p1","385-834[-]","HTR12_ARATH^HTR12_ARATH^Q:13-149,H:41-178^56.52%ID^E:6e-48^RecName: Full=Histone H3-like centromeric protein HTR12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^15-142^E:5.5e-38",".",".","COG2036^Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling","KEGG:ath:AT1G01370`KO:K11253","GO:0000785^cellular_component^chromatin`GO:0000775^cellular_component^chromosome, centromeric region`GO:0000777^cellular_component^condensed chromosome kinetochore`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0051301^biological_process^cell division`GO:0009567^biological_process^double fertilization forming a zygote and endosperm`GO:0051307^biological_process^meiotic chromosome separation`GO:0007126^biological_process^meiotic nuclear division","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN24866_c0_g1","leaves S. yangii","roots S. yangii",1.30135682213879,"0.000507431532140707","0.000736865046325841","TRINITY_DN24866_c0_g1_i2","E138_ARATH^E138_ARATH^Q:1590-250,H:25-453^33.41%ID^E:6e-81^RecName: Full=Glucan endo-1,3-beta-glucosidase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN24866_c0_g1_i2.p1","220-1656[-]","E138_ARATH^E138_ARATH^Q:23-469,H:25-453^33.41%ID^E:2e-82^RecName: Full=Glucan endo-1,3-beta-glucosidase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^23-359^E:5.9e-43`PF07983.10^X8^X8 domain^382-450^E:3.7e-11",".",".","ENOG410YARB^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT1G64760","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44479_c3_g5","leaves S. yangii","roots S. yangii",1.29987897242453,"0.000306234436426543","0.000451330715090471","TRINITY_DN44479_c3_g5_i1","ACCO5_ARATH^ACCO5_ARATH^Q:1115-201,H:1-307^68.06%ID^E:8e-145^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44479_c3_g5_i1.p1","198-1115[-]","ACCO5_ARATH^ACCO5_ARATH^Q:1-305,H:1-307^69.35%ID^E:1e-155^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^3-98^E:1.3e-16`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^161-254^E:1.8e-24",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT1G77330`KO:K05933","GO:0009815^molecular_function^1-aminocyclopropane-1-carboxylate oxidase activity`GO:0031418^molecular_function^L-ascorbic acid binding`GO:0046872^molecular_function^metal ion binding`GO:0006952^biological_process^defense response`GO:0009693^biological_process^ethylene biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN58769_c0_g1","leaves S. yangii","roots S. yangii",1.29183194572221,"0.000178843344539358","0.000267859427939826","TRINITY_DN58769_c0_g1_i1","PP117_ARATH^PP117_ARATH^Q:454-2076,H:48-568^55.64%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g73400, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN58769_c0_g1_i1.p1","325-2082[+]","PP117_ARATH^PP117_ARATH^Q:44-584,H:48-568^55.64%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g73400, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^247-290^E:0.0012`PF13041.3^PPR_2^PPR repeat family^248-296^E:1e-07`PF01535.17^PPR^PPR repeat^253-278^E:0.011`PF13041.3^PPR_2^PPR repeat family^282-331^E:2e-08`PF01535.17^PPR^PPR repeat^286-314^E:0.0034`PF13812.3^PPR_3^Pentatricopeptide repeat domain^305-370^E:0.0018`PF12854.4^PPR_1^PPR repeat^313-343^E:1.3e-08`PF01535.17^PPR^PPR repeat^320-349^E:1.7e-05`PF13041.3^PPR_2^PPR repeat family^356-404^E:2e-10`PF01535.17^PPR^PPR repeat^359-388^E:0.00057`PF13812.3^PPR_3^Pentatricopeptide repeat domain^379-439^E:4.4e-07`PF12854.4^PPR_1^PPR repeat^387-418^E:7e-10`PF13041.3^PPR_2^PPR repeat family^390-438^E:2.4e-13`PF01535.17^PPR^PPR repeat^394-419^E:0.0023`PF13812.3^PPR_3^Pentatricopeptide repeat domain^415-472^E:4e-11`PF12854.4^PPR_1^PPR repeat^424-453^E:1.5e-05`PF13041.3^PPR_2^PPR repeat family^425-471^E:1.2e-14`PF01535.17^PPR^PPR repeat^428-458^E:4.9e-06`PF13041.3^PPR_2^PPR repeat family^460-507^E:1.2e-11`PF01535.17^PPR^PPR repeat^464-493^E:2.5e-05`PF01535.17^PPR^PPR repeat^499-527^E:0.19",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G73400","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN46171_c0_g1","leaves S. yangii","roots S. yangii",1.28545644601028,"0.0075522693985974","0.0100164756805412","TRINITY_DN46171_c0_g1_i1","FBX13_ARATH^FBX13_ARATH^Q:52-1254,H:44-455^48.92%ID^E:2e-125^RecName: Full=F-box only protein 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46171_c0_g1_i1.p1","46-1278[+]","FBX13_ARATH^FBX13_ARATH^Q:3-403,H:44-455^48.92%ID^E:1e-126^RecName: Full=F-box only protein 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^24-62^E:1.2e-08`PF12937.4^F-box-like^F-box-like^32-62^E:2.5e-06",".",".","ENOG410YB55^FBOX","KEGG:ath:AT4G33160",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44383_c1_g1","leaves S. yangii","roots S. yangii",1.28225994635524,"0.000888393431558718","0.00126626464238073","TRINITY_DN44383_c1_g1_i2","HT1_ARATH^HT1_ARATH^Q:1502-504,H:53-358^34.43%ID^E:9e-62^RecName: Full=Serine/threonine-protein kinase HT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44383_c1_g1_i2.p1","468-1634[-]","HT1_ARATH^HT1_ARATH^Q:26-377,H:34-358^33.14%ID^E:2e-64^RecName: Full=Serine/threonine-protein kinase HT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^82-359^E:4.3e-61`PF00069.22^Pkinase^Protein kinase domain^84-357^E:1.9e-49",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G62400","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44972_c2_g8","leaves S. yangii","roots S. yangii",1.26482867666547,"0.00321805032382935","0.00440062069130457","TRINITY_DN44972_c2_g8_i2","CNR8_MAIZE^CNR8_MAIZE^Q:325-630,H:57-156^64.71%ID^E:5e-37^RecName: Full=Cell number regulator 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN44972_c2_g8_i2.p1","130-657[+]","CNR8_MAIZE^CNR8_MAIZE^Q:66-167,H:57-156^64.71%ID^E:4e-38^RecName: Full=Cell number regulator 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF04749.14^PLAC8^PLAC8 family^73-171^E:1.6e-16",".",".","COG0696^Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (By similarity)",".","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN37905_c0_g1","leaves S. yangii","roots S. yangii",1.24710004931229,"0.000208135224071747","0.000310415497908395","TRINITY_DN37905_c0_g1_i1","MCA1_ARATH^MCA1_ARATH^Q:1063-335,H:76-317^47.18%ID^E:6e-70^RecName: Full=Metacaspase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37905_c0_g1_i1.p1","215-1360[-]","MCA1_ARATH^MCA1_ARATH^Q:100-342,H:76-317^47.18%ID^E:7e-72^RecName: Full=Metacaspase-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00656.19^Peptidase_C14^Caspase domain^104-371^E:1.2e-42",".",".","ENOG410Y41C^Metacaspase","KEGG:ath:AT1G02170","GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0006952^biological_process^defense response`GO:0043068^biological_process^positive regulation of programmed cell death",".",".","."]
["TRINITY_DN46220_c3_g1","leaves S. yangii","roots S. yangii",1.22276664645987,"0.00500600223089437","0.00674599323344923","TRINITY_DN46220_c3_g1_i4","ATPG3_IPOBA^ATPG3_IPOBA^Q:685-425,H:96-182^77.01%ID^E:3e-35^RecName: Full=ATP synthase subunit gamma, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN46220_c3_g1_i4.p1","215-703[-]","ATPG3_IPOBA^ATPG3_IPOBA^Q:14-93,H:103-182^82.5%ID^E:2e-38^RecName: Full=ATP synthase subunit gamma, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF00231.16^ATP-synt^ATP synthase^12-86^E:2.6e-09",".",".",".",".","GO:0005743^cellular_component^mitochondrial inner membrane`GO:0045261^cellular_component^proton-transporting ATP synthase complex, catalytic core F(1)`GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0046961^molecular_function^proton-transporting ATPase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport","GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0046961^molecular_function^proton-transporting ATPase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport`GO:0045261^cellular_component^proton-transporting ATP synthase complex, catalytic core F(1)",".","."]
["TRINITY_DN46657_c1_g3","leaves S. yangii","roots S. yangii",1.2179117034123,"0.000237448398786191","0.000352729076354816","TRINITY_DN46657_c1_g3_i4","RFS2_ARATH^RFS2_ARATH^Q:161-2362,H:1-757^49.54%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46657_c1_g3_i4.p1","161-2404[+]","RFS2_ARATH^RFS2_ARATH^Q:1-734,H:1-757^49.54%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05691.9^Raffinose_syn^Raffinose synthase or seed imbibition protein Sip1^9-732^E:4.8e-259",".",".","ENOG410YBU9^raffinose synthase","KEGG:ath:AT3G57520`KO:K06617","GO:0009506^cellular_component^plasmodesma`GO:0052692^molecular_function^raffinose alpha-galactosidase activity`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0034484^biological_process^raffinose catabolic process`GO:0080167^biological_process^response to karrikin`GO:0006979^biological_process^response to oxidative stress",".",".","."]
["TRINITY_DN37903_c0_g1","leaves S. yangii","roots S. yangii",1.20523138707585,"0.00185713157193866","0.00258351296726012","TRINITY_DN37903_c0_g1_i1","PP251_ARATH^PP251_ARATH^Q:819-2090,H:165-588^53.3%ID^E:5e-159^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:921-2048,H:62-472^26.09%ID^E:5e-43^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:1104-1853,H:23-306^23.43%ID^E:6e-13^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:372-647,H:310-402^35.48%ID^E:4e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:372-614,H:209-289^32.1%ID^E:8e-06^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37903_c0_g1_i1.p1","147-2096[+]","PP251_ARATH^PP251_ARATH^Q:225-648,H:165-588^53.3%ID^E:3e-162^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:259-634,H:62-472^26.09%ID^E:7e-44^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:320-569,H:23-306^23.43%ID^E:3e-13^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:23-167,H:260-402^27.4%ID^E:6e-12^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP251_ARATH^PP251_ARATH^Q:76-156,H:209-289^32.1%ID^E:5e-06^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^76-104^E:6.2e-05`PF13041.3^PPR_2^PPR repeat family^266-310^E:1.4e-10`PF01535.17^PPR^PPR repeat^268-295^E:3.4e-05`PF13041.3^PPR_2^PPR repeat family^366-414^E:9.5e-08`PF01535.17^PPR^PPR repeat^369-399^E:1.5e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^369-413^E:0.0047`PF13041.3^PPR_2^PPR repeat family^468-515^E:5.5e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^468-512^E:0.0013`PF01535.17^PPR^PPR repeat^470-500^E:1.8e-06`PF01535.17^PPR^PPR repeat^506-532^E:0.018`PF01535.17^PPR^PPR repeat^545-567^E:0.82`PF13432.3^TPR_16^Tetratricopeptide repeat^587-627^E:0.007`PF01535.17^PPR^PPR repeat^609-637^E:0.68",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G23330",".",".",".","."]
["TRINITY_DN29400_c0_g1","leaves S. yangii","roots S. yangii",1.18769856041004,"0.0140863818313705","0.0182646261141862","TRINITY_DN29400_c0_g1_i1","FACR2_ARATH^FACR2_ARATH^Q:628-110,H:438-615^36.61%ID^E:1e-28^RecName: Full=Fatty acyl-CoA reductase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN29400_c0_g1_i1.p1","95-631[-]","FACR2_ARATH^FACR2_ARATH^Q:2-174,H:438-615^36.61%ID^E:2e-33^RecName: Full=Fatty acyl-CoA reductase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03015.16^Sterile^Male sterility protein^101-173^E:5.6e-16",".",".","ENOG410XS7R^fatty-acyl-CoA reductase (alcohol-forming) activity","KEGG:ath:AT3G11980`KO:K13356","GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity`GO:0016628^molecular_function^oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor`GO:0006629^biological_process^lipid metabolic process`GO:0010584^biological_process^pollen exine formation","GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity",".","."]
["TRINITY_DN17832_c0_g1","leaves S. yangii","roots S. yangii",1.17953400814647,"0.017570485444649","0.022584967359092","TRINITY_DN17832_c0_g1_i1","ZHD2_ARATH^ZHD2_ARATH^Q:286-729,H:47-219^42.77%ID^E:1e-39^RecName: Full=Zinc-finger homeodomain protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN17832_c0_g1_i1.p1","43-744[+]","ZHD6_ARATH^ZHD6_ARATH^Q:82-231,H:80-262^46.77%ID^E:3e-45^RecName: Full=Zinc-finger homeodomain protein 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04770.9^ZF-HD_dimer^ZF-HD protein dimerisation region^82-130^E:1.2e-25",".",".","ENOG410YKZ6^ZF-HD protein dimerisation region","KEGG:ath:AT2G18350","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN116851_c0_g1","leaves S. yangii","roots S. yangii",1.17650646950887,"0.00517385639673167","0.0069658315521662","TRINITY_DN116851_c0_g1_i1","TRN1_DATST^TRN1_DATST^Q:124-894,H:16-273^58.27%ID^E:2e-100^RecName: Full=Tropinone reductase 1 {ECO:0000303|PubMed:8415746};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Datureae; Datura",".","TRINITY_DN116851_c0_g1_i1.p1","91-891[+]","TRN1_DATST^TRN1_DATST^Q:12-266,H:16-271^58.33%ID^E:8e-109^RecName: Full=Tropinone reductase 1 {ECO:0000303|PubMed:8415746};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Datureae; Datura","PF00106.22^adh_short^short chain dehydrogenase^20-208^E:5.6e-53`PF08659.7^KR^KR domain^21-179^E:6e-13`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^21-181^E:0.00011`PF13561.3^adh_short_C2^Enoyl-(Acyl carrier protein) reductase^26-263^E:4.5e-56",".",".",".","KEGG:ag:AAA33281`KO:K08081","GO:0050356^molecular_function^tropine dehydrogenase activity`GO:0009710^biological_process^tropane alkaloid biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding",".","."]
["TRINITY_DN38534_c0_g1","leaves S. yangii","roots S. yangii",1.16978076915346,"0.0013933315103182","0.00195707435959845","TRINITY_DN38534_c0_g1_i1","EB1A_ARATH^EB1A_ARATH^Q:347-718,H:1-124^85.48%ID^E:1e-73^RecName: Full=Microtubule-associated protein RP/EB family member 1A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38534_c0_g1_i1.p2","347-721[+]","EB1A_ARATH^EB1A_ARATH^Q:1-124,H:1-124^85.48%ID^E:4e-76^RecName: Full=Microtubule-associated protein RP/EB family member 1A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00307.28^CH^Calponin homology (CH) domain^16-114^E:9.9e-09",".",".","COG5217^microtubule-associated protein RP EB family member","KEGG:ath:AT3G47690`KO:K10436","GO:0010005^cellular_component^cortical microtubule, transverse to long axis`GO:0005815^cellular_component^microtubule organizing center`GO:0009524^cellular_component^phragmoplast`GO:0009574^cellular_component^preprophase band`GO:0005876^cellular_component^spindle microtubule`GO:0000922^cellular_component^spindle pole`GO:0008017^molecular_function^microtubule binding`GO:0051301^biological_process^cell division`GO:0007067^biological_process^mitotic nuclear division`GO:0009652^biological_process^thigmotropism`GO:0016032^biological_process^viral process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47475_c5_g3","leaves S. yangii","roots S. yangii",1.16731248375772,"0.00211407409623327","0.0029302332662692","TRINITY_DN47475_c5_g3_i2","PP277_ARATH^PP277_ARATH^Q:2426-396,H:100-782^48.46%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP277_ARATH^PP277_ARATH^Q:2327-591,H:23-608^25.59%ID^E:1e-59^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47475_c5_g3_i2.p1","336-2471[-]","PP277_ARATH^PP277_ARATH^Q:5-692,H:89-782^48.63%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP277_ARATH^PP277_ARATH^Q:33-627,H:8-608^25.41%ID^E:6e-61^RecName: Full=Pentatricopeptide repeat-containing protein At3g50420;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^51-79^E:0.76`PF01535.17^PPR^PPR repeat^154-179^E:0.47`PF13041.3^PPR_2^PPR repeat family^179-228^E:1.8e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^181-227^E:9.6e-05`PF01535.17^PPR^PPR repeat^183-210^E:6.9e-07`PF01535.17^PPR^PPR repeat^255-276^E:0.01`PF13041.3^PPR_2^PPR repeat family^280-329^E:7e-09`PF01535.17^PPR^PPR repeat^283-309^E:4.7e-06`PF01535.17^PPR^PPR repeat^385-415^E:4.8e-05`PF13812.3^PPR_3^Pentatricopeptide repeat domain^483-530^E:0.0018`PF13041.3^PPR_2^PPR repeat family^484-530^E:8.5e-13`PF01535.17^PPR^PPR repeat^487-516^E:7.6e-08`PF01535.17^PPR^PPR repeat^521-549^E:0.056`PF01535.17^PPR^PPR repeat^557-578^E:0.0074",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G50420",".",".",".","."]
["TRINITY_DN39316_c0_g1","leaves S. yangii","roots S. yangii",1.16207101540264,"0.00261474729838117","0.00360191558898747","TRINITY_DN39316_c0_g1_i2","C724B_ORYSJ^C724B_ORYSJ^Q:156-626,H:25-185^65.85%ID^E:3e-70^RecName: Full=Cytochrome P450 724B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN39316_c0_g1_i2.p1","3-674[+]","C724B_ORYSJ^C724B_ORYSJ^Q:52-208,H:25-185^65.85%ID^E:4e-71^RecName: Full=Cytochrome P450 724B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".",".",".","COG2124^Cytochrome p450","KEGG:osa:4336116`KO:K12639","GO:0005623^cellular_component^cell`GO:0016021^cellular_component^integral component of membrane`GO:0008199^molecular_function^ferric iron binding`GO:0020037^molecular_function^heme binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0010012^molecular_function^steroid 22-alpha hydroxylase activity`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0010268^biological_process^brassinosteroid homeostasis`GO:0006879^biological_process^cellular iron ion homeostasis`GO:0006826^biological_process^iron ion transport`GO:0007275^biological_process^multicellular organism development`GO:0009647^biological_process^skotomorphogenesis`GO:0016125^biological_process^sterol metabolic process",".",".","."]
["TRINITY_DN45234_c0_g1","leaves S. yangii","roots S. yangii",1.15728371872123,{"v":6892343898.58238,"d":"6.89E+09"},"0.000105934751640632","TRINITY_DN45234_c0_g1_i1","ALY3_ARATH^ALY3_ARATH^Q:3617-252,H:21-1132^45.53%ID^E:0^RecName: Full=Protein ALWAYS EARLY 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45234_c0_g1_i1.p1","249-3671[-]","ALY3_ARATH^ALY3_ARATH^Q:19-1140,H:21-1132^45.91%ID^E:0^RecName: Full=Protein ALWAYS EARLY 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^44-77^E:9.2e-06`PF06584.10^DIRP^DIRP^636-736^E:9.6e-33",".",".","ENOG410YA1T^lin-9 homolog (C. elegans)","KEGG:ath:AT3G21430","GO:0005634^cellular_component^nucleus`GO:0017053^cellular_component^transcriptional repressor complex`GO:0003677^molecular_function^DNA binding`GO:0007049^biological_process^cell cycle`GO:0006351^biological_process^transcription, DNA-templated","GO:0006351^biological_process^transcription, DNA-templated`GO:0007049^biological_process^cell cycle`GO:0017053^cellular_component^transcriptional repressor complex",".","."]
["TRINITY_DN36804_c0_g1","leaves S. yangii","roots S. yangii",1.15628016411877,"0.0032793850706687","0.00448107632219872","TRINITY_DN36804_c0_g1_i2","PP207_ARATH^PP207_ARATH^Q:2746-287,H:41-881^60.69%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:2749-899,H:172-779^29.49%ID^E:1e-74^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:1534-722,H:11-313^24.67%ID^E:2e-21^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36804_c0_g1_i2.p1","242-2851[-]","PP207_ARATH^PP207_ARATH^Q:36-855,H:41-881^60.69%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:35-651,H:172-779^29.49%ID^E:2e-78^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:264-776,H:36-597^26.46%ID^E:1e-61^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP207_ARATH^PP207_ARATH^Q:440-710,H:11-313^24.67%ID^E:1e-21^RecName: Full=Pentatricopeptide repeat-containing protein At3g02330;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^82-109^E:0.045`PF01535.17^PPR^PPR repeat^110-139^E:1e-05`PF01535.17^PPR^PPR repeat^141-168^E:0.00037`PF01535.17^PPR^PPR repeat^214-238^E:0.057`PF01535.17^PPR^PPR repeat^242-272^E:2.2e-06`PF01535.17^PPR^PPR repeat^315-336^E:0.27`PF01535.17^PPR^PPR repeat^344-372^E:1`PF01535.17^PPR^PPR repeat^416-441^E:0.0012`PF01535.17^PPR^PPR repeat^517-541^E:1.4e-05`PF13041.3^PPR_2^PPR repeat family^542-589^E:3.6e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^543-589^E:0.00096`PF01535.17^PPR^PPR repeat^544-574^E:2.3e-05`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^585-737^E:2.9e-07`PF13041.3^PPR_2^PPR repeat family^643-690^E:7.7e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^643-689^E:0.00054`PF01535.17^PPR^PPR repeat^645-672^E:3.2e-06`PF01535.17^PPR^PPR repeat^681-707^E:0.044`PF01535.17^PPR^PPR repeat^717-741^E:0.00066`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^816-856^E:5e-07",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G02330",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN1611_c0_g1","leaves S. yangii","roots S. yangii",1.15586118842264,"0.019624994066732","0.0250998293292583","TRINITY_DN1611_c0_g1_i1","PP341_ARATH^PP341_ARATH^Q:2-1183,H:398-792^41.27%ID^E:1e-102^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP341_ARATH^PP341_ARATH^Q:80-556,H:324-481^27.67%ID^E:9e-12^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP341_ARATH^PP341_ARATH^Q:86-457,H:126-250^32%ID^E:6e-10^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP341_ARATH^PP341_ARATH^Q:11-604,H:201-430^22.61%ID^E:2e-07^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN1611_c0_g1_i1.p1","2-1186[+]","PP341_ARATH^PP341_ARATH^Q:1-394,H:398-792^41.27%ID^E:2e-109^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP341_ARATH^PP341_ARATH^Q:27-185,H:324-481^27.67%ID^E:5e-12^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP341_ARATH^PP341_ARATH^Q:29-152,H:126-250^32%ID^E:6e-10^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP341_ARATH^PP341_ARATH^Q:4-201,H:201-430^22.61%ID^E:1e-07^RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13041.3^PPR_2^PPR repeat family^86-133^E:1.6e-08`PF01535.17^PPR^PPR repeat^90-119^E:0.00011`PF01535.17^PPR^PPR repeat^126-151^E:0.076`PF01535.17^PPR^PPR repeat^162-186^E:0.089`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^261-384^E:7.1e-33",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G30700","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0016554^biological_process^cytidine to uridine editing`GO:0080156^biological_process^mitochondrial mRNA modification`GO:0000963^biological_process^mitochondrial RNA processing","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN43258_c0_g1","leaves S. yangii","roots S. yangii",1.15134502469672,"0.00898056892435768","0.0118382370903288","TRINITY_DN43258_c0_g1_i3","CCA21_ORYSJ^CCA21_ORYSJ^Q:266-1672,H:16-489^51.85%ID^E:2e-147^RecName: Full=Cyclin-A2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43258_c0_g1_i3.p1","215-1675[+]","CCA21_ARATH^CCA21_ARATH^Q:12-486,H:18-441^53.26%ID^E:4e-155^RecName: Full=Cyclin-A2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^227-353^E:4.5e-43`PF02984.16^Cyclin_C^Cyclin, C-terminal domain^356-478^E:2.9e-33",".",".","COG5024^g2 mitotic-specific","KEGG:ath:AT5G25380`KO:K06627","GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division","GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN46728_c4_g6","leaves S. yangii","roots S. yangii",1.14485879954547,"0.00477515458753109","0.00644598351507075","TRINITY_DN46728_c4_g6_i1","PP301_ARATH^PP301_ARATH^Q:2459-615,H:63-674^38.05%ID^E:3e-157^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP301_ARATH^PP301_ARATH^Q:1823-930,H:58-369^23.15%ID^E:1e-22^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46728_c4_g6_i1.p1","534-2549[-]","PP301_ARATH^PP301_ARATH^Q:31-645,H:63-674^38.05%ID^E:4e-160^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP301_ARATH^PP301_ARATH^Q:243-540,H:58-369^23.15%ID^E:7e-23^RecName: Full=Pentatricopeptide repeat-containing protein At4g02750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^39-62^E:0.079`PF13041.3^PPR_2^PPR repeat family^62-93^E:1.9e-08`PF01535.17^PPR^PPR repeat^64-93^E:8.9e-09`PF13041.3^PPR_2^PPR repeat family^93-123^E:2.3e-07`PF12854.4^PPR_1^PPR repeat^93-121^E:4e-07`PF01535.17^PPR^PPR repeat^95-124^E:2.1e-08`PF01535.17^PPR^PPR repeat^126-154^E:2.6e-06`PF01535.17^PPR^PPR repeat^157-186^E:0.00016`PF01535.17^PPR^PPR repeat^189-217^E:0.00014`PF01535.17^PPR^PPR repeat^220-247^E:1e-05`PF01535.17^PPR^PPR repeat^251-278^E:9.3e-05`PF01535.17^PPR^PPR repeat^282-308^E:0.079`PF01535.17^PPR^PPR repeat^312-338^E:0.011`PF01535.17^PPR^PPR repeat^344-372^E:0.0065`PF01535.17^PPR^PPR repeat^416-439^E:0.036`PF13041.3^PPR_2^PPR repeat family^442-489^E:3.6e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^442-488^E:0.009`PF01535.17^PPR^PPR repeat^444-472^E:2.1e-06`PF01535.17^PPR^PPR repeat^480-507^E:1.4`PF01535.17^PPR^PPR repeat^516-544^E:5e-05`PF01535.17^PPR^PPR repeat^586-614^E:0.66",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G02750",".",".",".","."]
["TRINITY_DN45003_c4_g6","leaves S. yangii","roots S. yangii",1.14178984933491,"0.0100489093104112","0.0131862707479257","TRINITY_DN45003_c4_g6_i1","MO25N_ARATH^MO25N_ARATH^Q:228-1232,H:1-337^67.75%ID^E:3e-162^RecName: Full=Putative MO25-like protein At5g47540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45003_c4_g6_i1.p1","3-1289[+]","MO25N_ARATH^MO25N_ARATH^Q:76-410,H:1-337^68.34%ID^E:4e-168^RecName: Full=Putative MO25-like protein At5g47540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08569.8^Mo25^Mo25-like^80-410^E:5.8e-114",".",".","ENOG410XP4S^Calcium binding protein","KEGG:ath:AT5G47540`KO:K08272",".",".",".","."]
["TRINITY_DN41966_c0_g2","leaves S. yangii","roots S. yangii",1.13792657623287,"0.0207112716482909","0.0264298827054566","TRINITY_DN41966_c0_g2_i1","LIN1_LOTJA^LIN1_LOTJA^Q:1366-230,H:812-1181^32.11%ID^E:1e-21^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:1660-1439,H:512-584^52.7%ID^E:5e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:2602-2231,H:114-267^32.47%ID^E:1e-12^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN41966_c0_g2_i1.p1","212-3601[-]","LIN1_LOTJA^LIN1_LOTJA^Q:746-1124,H:812-1181^32.11%ID^E:2e-34^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:648-721,H:512-584^52.7%ID^E:3e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:286-457,H:75-267^31.68%ID^E:3e-14^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus","PF04564.12^U-box^U-box domain^647-719^E:6.5e-08",".",".",".",".","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0009877^biological_process^nodulation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN45371_c1_g3","leaves S. yangii","roots S. yangii",1.13783776115954,"0.00022103862640602","0.000329034068941543","TRINITY_DN45371_c1_g3_i2","H32_WHEAT^H32_WHEAT^Q:633-226,H:1-136^99.26%ID^E:8e-76^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".","TRINITY_DN45371_c1_g3_i2.p1","223-633[-]","H32_TOBAC^H32_TOBAC^Q:1-136,H:1-136^100%ID^E:3e-93^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^1-132^E:8.3e-55",".",".",".",".","GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN37482_c0_g1","leaves S. yangii","roots S. yangii",1.13611080165201,"0.00435748988247313","0.00590217865341892","TRINITY_DN37482_c0_g1_i1","PP373_ARATH^PP373_ARATH^Q:3120-181,H:20-995^59.9%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP373_ARATH^PP373_ARATH^Q:3126-1552,H:225-738^28.31%ID^E:2e-43^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37482_c0_g1_i1.p1","178-3405[-]","PP373_ARATH^PP373_ARATH^Q:96-1075,H:20-995^59.9%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP373_ARATH^PP373_ARATH^Q:94-618,H:225-738^28.31%ID^E:4e-46^RecName: Full=Putative pentatricopeptide repeat-containing protein At5g09950;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^116-142^E:6.2e-06`PF13041.3^PPR_2^PPR repeat family^142-188^E:2.1e-07`PF01535.17^PPR^PPR repeat^144-174^E:2.7e-05`PF13041.3^PPR_2^PPR repeat family^249-297^E:8e-10`PF01535.17^PPR^PPR repeat^251-281^E:1e-07`PF01535.17^PPR^PPR repeat^332-357^E:0.56`PF01535.17^PPR^PPR repeat^360-384^E:0.6`PF01535.17^PPR^PPR repeat^437-462^E:0.0017`PF01535.17^PPR^PPR repeat^538-562^E:0.16`PF01535.17^PPR^PPR repeat^640-665^E:1.3`PF13041.3^PPR_2^PPR repeat family^666-713^E:1.1e-07`PF01535.17^PPR^PPR repeat^669-697^E:0.00015`PF01535.17^PPR^PPR repeat^741-767^E:0.098`PF13041.3^PPR_2^PPR repeat family^767-814^E:5.8e-11`PF12854.4^PPR_1^PPR repeat^767-795^E:8.8e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^767-813^E:3.2e-05`PF01535.17^PPR^PPR repeat^769-796^E:5.7e-09`PF01535.17^PPR^PPR repeat^804-832^E:0.81`PF01535.17^PPR^PPR repeat^841-865^E:0.84`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^943-1064^E:9.1e-42",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G09950","GO:0009451^biological_process^RNA modification","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN1611_c0_g2","leaves S. yangii","roots S. yangii",1.12549675725571,"0.0193435190193366","0.0247587572453344","TRINITY_DN1611_c0_g2_i1","PP214_ARATH^PP214_ARATH^Q:74-925,H:99-397^31.77%ID^E:4e-44^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP214_ARATH^PP214_ARATH^Q:176-682,H:245-413^31.95%ID^E:3e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP214_ARATH^PP214_ARATH^Q:113-925,H:11-296^23.61%ID^E:3e-18^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP214_ARATH^PP214_ARATH^Q:554-931,H:60-189^30.77%ID^E:4e-13^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN1611_c0_g2_i1.p1","2-937[+]","PP214_ARATH^PP214_ARATH^Q:25-308,H:99-397^31.77%ID^E:4e-44^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP214_ARATH^PP214_ARATH^Q:59-227,H:245-413^31.95%ID^E:2e-25^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP214_ARATH^PP214_ARATH^Q:38-308,H:11-296^23.61%ID^E:2e-18^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP214_ARATH^PP214_ARATH^Q:185-310,H:60-189^30.77%ID^E:4e-13^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g05240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^68-87^E:0.82`PF13041.3^PPR_2^PPR repeat family^94-141^E:1.1e-07`PF12854.4^PPR_1^PPR repeat^95-122^E:9.9e-06`PF01535.17^PPR^PPR repeat^97-123^E:3.2e-07`PF13041.3^PPR_2^PPR repeat family^196-239^E:4.5e-11`PF01535.17^PPR^PPR repeat^198-227^E:9.3e-07`PF01535.17^PPR^PPR repeat^295-311^E:0.3",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G05240",".",".",".","."]
["TRINITY_DN43391_c0_g1","leaves S. yangii","roots S. yangii",1.12216390639464,"0.000993301804905911","0.00141090684264879","TRINITY_DN43391_c0_g1_i2","FAH1_ARATH^FAH1_ARATH^Q:289-987,H:1-237^59.92%ID^E:7e-77^RecName: Full=Dihydroceramide fatty acyl 2-hydroxylase FAH1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43391_c0_g1_i2.p1","289-999[+]","FAH1_ARATH^FAH1_ARATH^Q:1-233,H:1-237^59.92%ID^E:1e-102^RecName: Full=Dihydroceramide fatty acyl 2-hydroxylase FAH1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04116.10^FA_hydroxylase^Fatty acid hydroxylase superfamily^87-226^E:1.2e-15",".",".","COG3000^fatty acid hydroxylase","KEGG:ath:AT2G34770`KO:K19706","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005506^molecular_function^iron ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0000038^biological_process^very long-chain fatty acid metabolic process","GO:0005506^molecular_function^iron ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47480_c1_g6","leaves S. yangii","roots S. yangii",1.12105961318471,"0.0193702355092919","0.0247916886138918","TRINITY_DN47480_c1_g6_i3","C76C4_ARATH^C76C4_ARATH^Q:716-117,H:307-507^52.22%ID^E:2e-59^RecName: Full=Cytochrome P450 76C4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47480_c1_g6_i3.p1","90-665[-]","C76C4_ARATH^C76C4_ARATH^Q:1-183,H:324-507^53.23%ID^E:1e-64^RecName: Full=Cytochrome P450 76C4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^2-177^E:8.9e-59",".",".","COG2124^Cytochrome p450","KEGG:ath:AT2G45550","GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0044550^biological_process^secondary metabolite biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN61323_c0_g1","leaves S. yangii","roots S. yangii",1.10432287053274,"0.0297125472596394","0.0372795763437611","TRINITY_DN61323_c0_g1_i1","ATL71_ARATH^ATL71_ARATH^Q:426-848,H:20-173^35.03%ID^E:3e-24^RecName: Full=Putative RING-H2 finger protein ATL71;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN61323_c0_g1_i1.p1","360-908[+]","ATL71_ARATH^ATL71_ARATH^Q:23-174,H:20-184^39.39%ID^E:2e-33^RecName: Full=Putative RING-H2 finger protein ATL71;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^119-161^E:2.4e-15`PF17123.2^zf-RING_11^RING-like zinc finger^119-147^E:2.8e-11`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^119-160^E:5.9e-10`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^119-158^E:5.5e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^119-160^E:1.7e-07",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT5G06490","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN15500_c0_g1","leaves S. yangii","roots S. yangii",1.10150077005783,"0.00052959651863604","0.000768207284647712","TRINITY_DN15500_c0_g1_i1","U89B2_STERE^U89B2_STERE^Q:164-1555,H:7-467^57.42%ID^E:2e-180^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia",".","TRINITY_DN15500_c0_g1_i1.p1","143-1564[+]","U89B2_STERE^U89B2_STERE^Q:8-471,H:7-467^57.42%ID^E:0^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^270-402^E:7.3e-20",".",".",".",".","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN40597_c0_g1","leaves S. yangii","roots S. yangii",1.09870395790446,"0.0187185964038959","0.0240005055613433","TRINITY_DN40597_c0_g1_i1","SRC2_ARATH^SRC2_ARATH^Q:686-303,H:6-138^34.59%ID^E:9e-18^RecName: Full=Protein SRC2 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40597_c0_g1_i1.p1","195-752[-]","SRC2_ARATH^SRC2_ARATH^Q:23-150,H:6-138^34.59%ID^E:4e-18^RecName: Full=Protein SRC2 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^21-119^E:2.3e-13",".",".","ENOG410YJ7V^C2 domain","KEGG:ath:AT1G09070","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0000326^cellular_component^protein storage vacuole`GO:0032586^cellular_component^protein storage vacuole membrane`GO:0006623^biological_process^protein targeting to vacuole","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46302_c1_g1","leaves S. yangii","roots S. yangii",1.0980065546691,"0.0234525541674236","0.0297540720583217","TRINITY_DN46302_c1_g1_i1","NDHH_PLAOC^NDHH_PLAOC^Q:325-1497,H:1-391^95.14%ID^E:0^RecName: Full=NAD(P)H-quinone oxidoreductase subunit H, chloroplastic {ECO:0000255|HAMAP-Rule:MF_01358};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Proteales; Platanaceae; Platanus",".","TRINITY_DN46302_c1_g1_i1.p1","271-1506[+]","NDHH_PLAOC^NDHH_PLAOC^Q:19-411,H:1-393^95.17%ID^E:0^RecName: Full=NAD(P)H-quinone oxidoreductase subunit H, chloroplastic {ECO:0000255|HAMAP-Rule:MF_01358};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Proteales; Platanaceae; Platanus","PF00346.16^Complex1_49kDa^Respiratory-chain NADH dehydrogenase, 49 Kd subunit^142-411^E:1.6e-100",".",".",".",".","GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0051287^molecular_function^NAD binding`GO:0016655^molecular_function^oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor`GO:0048038^molecular_function^quinone binding`GO:0019684^biological_process^photosynthesis, light reaction`GO:0006810^biological_process^transport","GO:0016651^molecular_function^oxidoreductase activity, acting on NAD(P)H`GO:0048038^molecular_function^quinone binding`GO:0051287^molecular_function^NAD binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN36335_c0_g1","leaves S. yangii","roots S. yangii",1.09641120717599,"0.000351068830099794","0.000515289704069741","TRINITY_DN36335_c0_g1_i1","DIM1B_ARATH^DIM1B_ARATH^Q:142-1203,H:34-370^57.26%ID^E:2e-119^RecName: Full=Ribosomal RNA small subunit methyltransferase, mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36335_c0_g1_i1.p1","637-1269[+]","DIM1B_ARATH^DIM1B_ARATH^Q:2-189,H:179-370^59.28%ID^E:3e-71^RecName: Full=Ribosomal RNA small subunit methyltransferase, mitochondrial {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00398.17^RrnaAD^Ribosomal RNA adenine dimethylase^4-101^E:3.5e-25",".",".","COG0030^Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity)","KEGG:ath:AT5G66360`KO:K14191","GO:0005739^cellular_component^mitochondrion`GO:0003723^molecular_function^RNA binding`GO:0000179^molecular_function^rRNA (adenine-N6,N6-)-dimethyltransferase activity`GO:0046085^biological_process^adenosine metabolic process",".",".","."]
["TRINITY_DN46237_c0_g5","leaves S. yangii","roots S. yangii",1.0948654117068,"0.0147660939888279","0.0191054802404426","TRINITY_DN46237_c0_g5_i1","PPR60_ARATH^PPR60_ARATH^Q:1889-249,H:27-571^52.91%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g26900, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46237_c0_g5_i1.p1","240-1979[-]","PPR60_ARATH^PPR60_ARATH^Q:31-577,H:27-571^52.91%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At1g26900, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^95-124^E:0.0026`PF01535.17^PPR^PPR repeat^172-194^E:0.0023`PF01535.17^PPR^PPR repeat^201-229^E:0.15`PF01535.17^PPR^PPR repeat^275-296^E:0.0098`PF13812.3^PPR_3^Pentatricopeptide repeat domain^297-347^E:1.9e-05`PF12854.4^PPR_1^PPR repeat^298-329^E:5.3e-09`PF13041.3^PPR_2^PPR repeat family^301-347^E:5.8e-12`PF01535.17^PPR^PPR repeat^303-333^E:9.7e-10`PF01535.17^PPR^PPR repeat^376-402^E:0.0011`PF13041.3^PPR_2^PPR repeat family^401-448^E:2.7e-09`PF13812.3^PPR_3^Pentatricopeptide repeat domain^402-448^E:0.0014`PF01535.17^PPR^PPR repeat^405-434^E:1.4e-07`PF01535.17^PPR^PPR repeat^439-466^E:0.017`PF01535.17^PPR^PPR repeat^476-498^E:0.033",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G26900","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN45546_c2_g7","leaves S. yangii","roots S. yangii",1.08637739793935,"0.000194142089655019","0.000290166748971614","TRINITY_DN45546_c2_g7_i2","CPR30_ARATH^CPR30_ARATH^Q:61-1209,H:1-368^26.68%ID^E:1e-19^RecName: Full=F-box protein CPR30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45546_c2_g7_i2.p1","1-1251[+]","CPR30_ARATH^CPR30_ARATH^Q:21-403,H:1-368^26.68%ID^E:5e-20^RecName: Full=F-box protein CPR30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^21-60^E:2.6e-07`PF07734.10^FBA_1^F-box associated^249-340^E:2.3e-09",".",".","ENOG4111BET^NA","KEGG:ath:AT4G12560","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0031348^biological_process^negative regulation of defense response`GO:0042177^biological_process^negative regulation of protein catabolic process`GO:0009626^biological_process^plant-type hypersensitive response`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45454_c3_g2","leaves S. yangii","roots S. yangii",1.08584752554061,"0.000267075393834331","0.000395312538110667","TRINITY_DN45454_c3_g2_i3","PP417_ARATH^PP417_ARATH^Q:2229-364,H:38-657^55.61%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g44230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45454_c3_g2_i3.p1","361-2331[-]","PP417_ARATH^PP417_ARATH^Q:35-656,H:38-657^55.61%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g44230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^112-140^E:0.0055`PF01535.17^PPR^PPR repeat^183-211^E:0.00026`PF12854.4^PPR_1^PPR repeat^210-238^E:7.2e-06`PF01535.17^PPR^PPR repeat^213-241^E:6.8e-06`PF13041.3^PPR_2^PPR repeat family^241-289^E:3.5e-09`PF01535.17^PPR^PPR repeat^244-274^E:2.4e-06`PF01535.17^PPR^PPR repeat^319-346^E:9e-05`PF13041.3^PPR_2^PPR repeat family^344-391^E:4.2e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^344-391^E:2.1e-05`PF12854.4^PPR_1^PPR repeat^345-373^E:6e-06`PF01535.17^PPR^PPR repeat^347-374^E:3.7e-06`PF13812.3^PPR_3^Pentatricopeptide repeat domain^368-429^E:0.00033`PF01535.17^PPR^PPR repeat^420-443^E:0.25`PF01535.17^PPR^PPR repeat^491-514^E:0.62`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^520-646^E:8.9e-40",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G44230",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN47571_c3_g2","leaves S. yangii","roots S. yangii",1.08069703400367,"0.0120203476752638","0.0156724150695355","TRINITY_DN47571_c3_g2_i5","STY8_ARATH^STY8_ARATH^Q:892-1668,H:280-528^36.92%ID^E:5e-44^RecName: Full=Serine/threonine-protein kinase STY8 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47571_c3_g2_i5.p1","511-1755[+]","STY8_ARATH^STY8_ARATH^Q:128-400,H:280-542^37.68%ID^E:9e-49^RecName: Full=Serine/threonine-protein kinase STY8 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^30-118^E:8.2e-13`PF13857.3^Ank_5^Ankyrin repeats (many copies)^47-94^E:5.2e-07`PF13606.3^Ank_3^Ankyrin repeat^57-84^E:0.00084`PF13637.3^Ank_4^Ankyrin repeats (many copies)^57-107^E:2.7e-06`PF00023.27^Ank^Ankyrin repeat^58-87^E:3.5e-06`PF00069.22^Pkinase^Protein kinase domain^139-390^E:5.4e-54`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^141-393^E:1.2e-55",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G17700","GO:0005829^cellular_component^cytosol`GO:0016597^molecular_function^amino acid binding`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0004712^molecular_function^protein serine/threonine/tyrosine kinase activity`GO:0009658^biological_process^chloroplast organization","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43532_c1_g2","leaves S. yangii","roots S. yangii",1.07638594908157,"0.0187170867050496","0.0239997960325938","TRINITY_DN43532_c1_g2_i1","PP267_ARATH^PP267_ARATH^Q:2082-457,H:42-591^61.34%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g47530;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43532_c1_g2_i1.p1","454-2247[-]","PP267_ARATH^PP267_ARATH^Q:28-597,H:14-591^60.79%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g47530;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^165-191^E:0.67`PF12854.4^PPR_1^PPR repeat^190-219^E:3e-07`PF13041.3^PPR_2^PPR repeat family^191-238^E:2.6e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^191-239^E:0.0039`PF01535.17^PPR^PPR repeat^193-221^E:1.1e-08`PF01535.17^PPR^PPR repeat^266-293^E:0.00026`PF13041.3^PPR_2^PPR repeat family^293-340^E:2.5e-11`PF13812.3^PPR_3^Pentatricopeptide repeat domain^293-339^E:0.00053`PF01535.17^PPR^PPR repeat^295-325^E:2.5e-07`PF01535.17^PPR^PPR repeat^331-357^E:0.011`PF01535.17^PPR^PPR repeat^367-392^E:0.022`PF01535.17^PPR^PPR repeat^436-462^E:0.022`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^468-587^E:1.9e-30",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G47530",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN45480_c2_g4","leaves S. yangii","roots S. yangii",1.07414882761384,"0.00236745965287253","0.00327100724094725","TRINITY_DN45480_c2_g4_i1","FZR3_ARATH^FZR3_ARATH^Q:1824-334,H:1-481^78.04%ID^E:0^RecName: Full=Protein FIZZY-RELATED 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45480_c2_g4_i1.p1","331-1824[-]","FZR3_ARATH^FZR3_ARATH^Q:1-497,H:1-481^78.64%ID^E:0^RecName: Full=Protein FIZZY-RELATED 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00400.29^WD40^WD domain, G-beta repeat^307-342^E:3e-05`PF08662.8^eIF2A^Eukaryotic translation initiation factor eIF2A^334-469^E:0.00013`PF00400.29^WD40^WD domain, G-beta repeat^347-387^E:0.0035`PF00400.29^WD40^WD domain, G-beta repeat^436-472^E:0.00015",".",".","COG2319^wd repeat","KEGG:ath:AT5G13840`KO:K03364","GO:0051301^biological_process^cell division`GO:0007067^biological_process^mitotic nuclear division`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43519_c0_g1","leaves S. yangii","roots S. yangii",1.07368081289905,"0.0107757326656203","0.0141038795752793","TRINITY_DN43519_c0_g1_i6","LIS_CLABR^LIS_CLABR^Q:1964-1308,H:349-569^48.42%ID^E:2e-100^RecName: Full=S-linalool synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia`LIS_CLABR^LIS_CLABR^Q:992-354,H:612-819^41.1%ID^E:2e-100^RecName: Full=S-linalool synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia`LIS_CLABR^LIS_CLABR^Q:1218-1087,H:568-611^56.82%ID^E:2e-100^RecName: Full=S-linalool synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia",".","TRINITY_DN43519_c0_g1_i6.p2","1278-1925[-]","LIS_CLABR^LIS_CLABR^Q:1-206,H:362-569^49.52%ID^E:8e-59^RecName: Full=S-linalool synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^7-47^E:6.3e-09`PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^110-206^E:6.4e-28",".",".",".","KEGG:ag:AAC49395","GO:0000287^molecular_function^magnesium ion binding`GO:0034007^molecular_function^S-linalool synthase activity`GO:0010333^molecular_function^terpene synthase activity","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN42470_c3_g4","leaves S. yangii","roots S. yangii",1.07159580564005,"0.000938478340817929","0.00133545318899789","TRINITY_DN42470_c3_g4_i1","PP449_ARATH^PP449_ARATH^Q:1615-293,H:21-490^32.84%ID^E:7e-81^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42470_c3_g4_i1.p1","257-1657[-]","PP449_ARATH^PP449_ARATH^Q:15-455,H:21-490^32.84%ID^E:2e-82^RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^70-116^E:0.0015`PF13041.3^PPR_2^PPR repeat family^174-219^E:1e-07`PF01535.17^PPR^PPR repeat^176-202^E:0.00046`PF01535.17^PPR^PPR repeat^249-273^E:0.01`PF13041.3^PPR_2^PPR repeat family^275-322^E:1.1e-10`PF13812.3^PPR_3^Pentatricopeptide repeat domain^275-322^E:0.00038`PF01535.17^PPR^PPR repeat^278-306^E:5.2e-07`PF01535.17^PPR^PPR repeat^313-338^E:0.0025`PF01535.17^PPR^PPR repeat^349-373^E:0.19",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G66520","GO:0009507^cellular_component^chloroplast`GO:1900865^biological_process^chloroplast RNA modification`GO:0016554^biological_process^cytidine to uridine editing",".",".","."]
["TRINITY_DN45584_c3_g1","leaves S. yangii","roots S. yangii",1.06074361866435,"0.00411367556271699","0.00558187628666913","TRINITY_DN45584_c3_g1_i2","PP320_ARATH^PP320_ARATH^Q:1528-836,H:498-726^39.32%ID^E:2e-82^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2613-1567,H:141-483^29.55%ID^E:2e-82^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1540-911,H:291-498^30.33%ID^E:2e-37^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2268-1567,H:52-281^27.12%ID^E:2e-37^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2592-1546,H:249-592^28.05%ID^E:4e-32^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1540-1295,H:595-677^26.51%ID^E:4e-32^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:2511-1828,H:380-599^25.88%ID^E:6e-16^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1540-911,H:190-396^25.59%ID^E:3e-11^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP320_ARATH^PP320_ARATH^Q:1531-896,H:92-300^24.42%ID^E:3e-06^RecName: Full=Pentatricopeptide repeat-containing protein DOT4, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45584_c3_g1_i2.p1","1528-2781[-]","PPR21_ARATH^PPR21_ARATH^Q:30-405,H:52-455^31.48%ID^E:3e-50^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR21_ARATH^PPR21_ARATH^Q:104-411,H:23-358^27.54%ID^E:1e-32^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR21_ARATH^PPR21_ARATH^Q:61-341,H:216-492^30.93%ID^E:2e-25^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR21_ARATH^PPR21_ARATH^Q:238-415,H:50-230^30.39%ID^E:4e-18^RecName: Full=Pentatricopeptide repeat-containing protein At1g08070, chloroplastic {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^180-206^E:0.11`PF01535.17^PPR^PPR repeat^255-283^E:0.023`PF13041.3^PPR_2^PPR repeat family^283-330^E:9.1e-09`PF01535.17^PPR^PPR repeat^285-315^E:3e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^343-395^E:0.0058`PF01535.17^PPR^PPR repeat^358-382^E:0.004`PF01535.17^PPR^PPR repeat^388-412^E:0.037",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G08070","GO:0009507^cellular_component^chloroplast`GO:0031425^biological_process^chloroplast RNA processing`GO:0006397^biological_process^mRNA processing",".",".","."]
["TRINITY_DN45913_c0_g1","leaves S. yangii","roots S. yangii",1.05979587142021,"0.00777878989385282","0.0103027502203995","TRINITY_DN45913_c0_g1_i1","RPK1_IPONI^RPK1_IPONI^Q:3797-492,H:1-1101^58.45%ID^E:0^RecName: Full=Receptor-like protein kinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN45913_c0_g1_i1.p1","480-3797[-]","RPK1_IPONI^RPK1_IPONI^Q:1-1102,H:1-1101^58.45%ID^E:0^RecName: Full=Receptor-like protein kinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^27-65^E:4.1e-06`PF00560.30^LRR_1^Leucine Rich Repeat^118-139^E:0.58`PF13855.3^LRR_8^Leucine rich repeat^189-248^E:4e-07`PF13855.3^LRR_8^Leucine rich repeat^476-534^E:2.9e-08`PF00560.30^LRR_1^Leucine Rich Repeat^547-569^E:0.95`PF13516.3^LRR_6^Leucine Rich repeat^645-659^E:2`PF00069.22^Pkinase^Protein kinase domain^819-1091^E:1.2e-40`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^821-1092^E:4.3e-32","sigP:1^23^0.934^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0019199^molecular_function^transmembrane receptor protein kinase activity`GO:0006468^biological_process^protein phosphorylation","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN28289_c0_g1","leaves S. yangii","roots S. yangii",1.05544730560488,"0.0132614005717783","0.0172314439654834","TRINITY_DN28289_c0_g1_i1","PP329_ARATH^PP329_ARATH^Q:2716-467,H:9-760^49%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g20770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP329_ARATH^PP329_ARATH^Q:2746-2051,H:406-611^28.81%ID^E:8e-17^RecName: Full=Pentatricopeptide repeat-containing protein At4g20770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28289_c0_g1_i1.p1","458-2449[-]","PP329_ARATH^PP329_ARATH^Q:1-661,H:98-760^50.98%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At4g20770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP329_ARATH^PP329_ARATH^Q:60-596,H:25-592^23.14%ID^E:2e-38^RecName: Full=Pentatricopeptide repeat-containing protein At4g20770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP329_ARATH^PP329_ARATH^Q:424-532,H:10-149^29.29%ID^E:1e-07^RecName: Full=Pentatricopeptide repeat-containing protein At4g20770;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^7-37^E:0.0074`PF01535.17^PPR^PPR repeat^108-137^E:0.00014`PF01535.17^PPR^PPR repeat^191-215^E:0.0039`PF13041.3^PPR_2^PPR repeat family^217-263^E:1e-10`PF01535.17^PPR^PPR repeat^219-249^E:1e-05`PF01535.17^PPR^PPR repeat^254-279^E:0.15`PF13041.3^PPR_2^PPR repeat family^282-330^E:7.2e-11`PF01535.17^PPR^PPR repeat^286-313^E:4e-07`PF01535.17^PPR^PPR repeat^386-415^E:0.18`PF01535.17^PPR^PPR repeat^459-484^E:0.0029`PF12854.4^PPR_1^PPR repeat^481-512^E:2.8e-06`PF13041.3^PPR_2^PPR repeat family^484-532^E:3.3e-13`PF13812.3^PPR_3^Pentatricopeptide repeat domain^485-531^E:6.6e-05`PF01535.17^PPR^PPR repeat^487-515^E:4.8e-08`PF01535.17^PPR^PPR repeat^522-549^E:0.011`PF01535.17^PPR^PPR repeat^559-585^E:0.55",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G20770",".",".",".","."]
["TRINITY_DN88261_c0_g1","leaves S. yangii","roots S. yangii",1.04900525976648,"0.0109492521938035","0.014325014756318","TRINITY_DN88261_c0_g1_i1","OCT3_ARATH^OCT3_ARATH^Q:1650-118,H:6-512^56.76%ID^E:0^RecName: Full=Organic cation/carnitine transporter 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN88261_c0_g1_i1.p1","88-1662[-]","OCT3_ARATH^OCT3_ARATH^Q:5-515,H:6-512^56.76%ID^E:0^RecName: Full=Organic cation/carnitine transporter 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^120-500^E:1.2e-27`PF07690.13^MFS_1^Major Facilitator Superfamily^123-463^E:1.2e-20",".",".","ENOG410XR6G^ion transport","KEGG:ath:AT1G16390","GO:0016021^cellular_component^integral component of membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0005524^molecular_function^ATP binding`GO:0022891^molecular_function^substrate-specific transmembrane transporter activity`GO:0070417^biological_process^cellular response to cold`GO:0006811^biological_process^ion transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45739_c1_g2","leaves S. yangii","roots S. yangii",1.04891352551077,"0.0128181665388424","0.0166762419626122","TRINITY_DN45739_c1_g2_i1","PP191_ARATH^PP191_ARATH^Q:2558-702,H:16-635^55.68%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g37310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45739_c1_g2_i1.p1","708-2591[-]","PP191_ARATH^PP191_ARATH^Q:12-627,H:16-632^55.79%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At2g37310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^169-195^E:0.36`PF01535.17^PPR^PPR repeat^197-226^E:1.7e-07`PF01535.17^PPR^PPR repeat^270-296^E:0.00042`PF12854.4^PPR_1^PPR repeat^297-325^E:5e-06`PF01535.17^PPR^PPR repeat^299-327^E:1.8e-07`PF13041.3^PPR_2^PPR repeat family^328-371^E:2.9e-07`PF01535.17^PPR^PPR repeat^331-360^E:6.1e-05`PF01535.17^PPR^PPR repeat^402-428^E:0.013`PF13041.3^PPR_2^PPR repeat family^429-476^E:4.3e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^429-475^E:7.8e-07`PF01535.17^PPR^PPR repeat^432-460^E:3.1e-06`PF01535.17^PPR^PPR repeat^466-490^E:0.00092`PF01535.17^PPR^PPR repeat^504-529^E:0.058`PF01535.17^PPR^PPR repeat^570-598^E:0.0045`PF13176.3^TPR_7^Tetratricopeptide repeat^573-592^E:0.019",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT2G37310",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45192_c1_g2","leaves S. yangii","roots S. yangii",1.04783441028627,"0.0209281555790354","0.0266876520534285","TRINITY_DN45192_c1_g2_i2","PP336_ARATH^PP336_ARATH^Q:1696-557,H:194-573^59.21%ID^E:8e-160^RecName: Full=Pentatricopeptide repeat-containing protein At4g22760;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45192_c1_g2_i2.p1","551-1627[-]","PP336_ARATH^PP336_ARATH^Q:1-357,H:217-573^59.66%ID^E:4e-152^RecName: Full=Pentatricopeptide repeat-containing protein At4g22760;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PP336_ARATH^PP336_ARATH^Q:29-296,H:114-410^23.78%ID^E:5e-17^RecName: Full=Pentatricopeptide repeat-containing protein At4g22760;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^18-46^E:2.4e-05`PF01535.17^PPR^PPR repeat^48-71^E:0.00013`PF13041.3^PPR_2^PPR repeat family^80-125^E:1.2e-07`PF01535.17^PPR^PPR repeat^81-105^E:1.4e-05`PF01535.17^PPR^PPR repeat^154-180^E:0.00028`PF13041.3^PPR_2^PPR repeat family^180-227^E:3.9e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^180-226^E:2.9e-06`PF01535.17^PPR^PPR repeat^182-212^E:9.6e-08`PF17177.1^PPR_long^Pentacotripeptide-repeat region of PROPR^183-277^E:7.9e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^203-263^E:5.6e-07`PF13041.3^PPR_2^PPR repeat family^214-261^E:8.7e-08`PF01535.17^PPR^PPR repeat^217-247^E:0.004`PF12854.4^PPR_1^PPR repeat^246-277^E:1.2e-05`PF01535.17^PPR^PPR repeat^253-278^E:0.00021",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G22760",".",".",".","."]
["TRINITY_DN46230_c1_g1","leaves S. yangii","roots S. yangii",1.04482106879846,"0.00143561442145379","0.00201454817271328","TRINITY_DN46230_c1_g1_i3","RL172_ARATH^RL172_ARATH^Q:7-489,H:1-160^69.14%ID^E:8e-74^RecName: Full=60S ribosomal protein L17-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46230_c1_g1_i3.p1","1-570[+]","RL172_ARATH^RL172_ARATH^Q:3-161,H:1-158^70%ID^E:3e-74^RecName: Full=60S ribosomal protein L17-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00237.16^Ribosomal_L22^Ribosomal protein L22p/L17e^24-155^E:2.7e-35",".",".","COG0091^The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (By similarity)",".","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0005730^cellular_component^nucleolus`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44579_c6_g4","leaves S. yangii","roots S. yangii",1.04136908481721,"0.00458197039369935","0.00619453369607709","TRINITY_DN44579_c6_g4_i2","PHT14_ARATH^PHT14_ARATH^Q:54-815,H:259-511^81.1%ID^E:2e-113^RecName: Full=Inorganic phosphate transporter 1-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44579_c6_g4_i2.p1","285-899[+]","PHT17_ARATH^PHT17_ARATH^Q:1-188,H:331-518^82.45%ID^E:2e-108^RecName: Full=Probable inorganic phosphate transporter 1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^26-181^E:8.6e-19",".",".","ENOG410ZVN7^phosphate transporter","KEGG:ath:AT3G54700`KO:K08176","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:1901683^molecular_function^arsenate ion transmembrane transporter activity`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:1901684^biological_process^arsenate ion transmembrane transport`GO:0006817^biological_process^phosphate ion transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN22086_c0_g1","leaves S. yangii","roots S. yangii",1.03917729866943,"0.00325631534276473","0.00445052226565862","TRINITY_DN22086_c0_g1_i1","Y3589_ARATH^Y3589_ARATH^Q:1261-335,H:6-311^52.41%ID^E:9e-109^RecName: Full=PTI1-like tyrosine-protein kinase At3g15890;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22086_c0_g1_i1.p1","143-1276[-]","Y3589_ARATH^Y3589_ARATH^Q:6-314,H:6-311^52.41%ID^E:2e-110^RecName: Full=PTI1-like tyrosine-protein kinase At3g15890;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^44-311^E:3.2e-43`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^47-312^E:2.8e-43",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G15890","GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004715^molecular_function^non-membrane spanning protein tyrosine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN38928_c0_g1","leaves S. yangii","roots S. yangii",1.03751326111577,"0.00131526444385377","0.00185063223160766","TRINITY_DN38928_c0_g1_i3","SRP_VITRI^SRP_VITRI^Q:745-293,H:87-237^43.71%ID^E:2e-34^RecName: Full=Stress-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN38928_c0_g1_i3.p1","254-832[-]","SRP_VITRI^SRP_VITRI^Q:30-186,H:87-243^42.68%ID^E:2e-36^RecName: Full=Stress-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF05755.9^REF^Rubber elongation factor protein (REF)^30-172^E:4e-36",".",".",".",".",".",".",".","."]
["TRINITY_DN44519_c3_g3","leaves S. yangii","roots S. yangii",1.03747479544277,"0.0124879757235896","0.0162652189515884","TRINITY_DN44519_c3_g3_i1","WRKY6_ARATH^WRKY6_ARATH^Q:1214-285,H:84-434^46.74%ID^E:5e-63^RecName: Full=WRKY transcription factor 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44519_c3_g3_i1.p1","21-1301[-]","WRK42_ARATH^WRK42_ARATH^Q:80-401,H:115-503^45.41%ID^E:3e-82^RecName: Full=Probable WRKY transcription factor 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^230-287^E:1.2e-26",".",".","ENOG410YDVM^Transcription factor","KEGG:ath:AT4G04450","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47310_c0_g2","leaves S. yangii","roots S. yangii",1.03198995185681,"0.000568676545871201","0.000822897226269022","TRINITY_DN47310_c0_g2_i1","RX24L_ARATH^RX24L_ARATH^Q:2-487,H:342-502^38.55%ID^E:1e-29^RecName: Full=Probable disease resistance protein RXW24L;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47310_c0_g2_i1.p1","2-502[+]","RX24L_ARATH^RX24L_ARATH^Q:1-162,H:342-502^38.55%ID^E:1e-29^RecName: Full=Probable disease resistance protein RXW24L;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^5-109^E:3.8e-22",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G58410","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47122_c0_g1","leaves S. yangii","roots S. yangii",1.02910458878444,"0.000160543418779099","0.000241040839825323","TRINITY_DN47122_c0_g1_i9","RSLE3_ORYSJ^RSLE3_ORYSJ^Q:339-539,H:662-732^35.21%ID^E:4e-06^RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47122_c0_g1_i9.p1","168-578[+]","RSLE3_ORYSJ^RSLE3_ORYSJ^Q:58-124,H:662-732^35.21%ID^E:3e-07^RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF05699.11^Dimer_Tnp_hAT^hAT family C-terminal dimerisation region^53-123^E:1.1e-15",".",".","ENOG410Y37V^transposon protein","KEGG:osa:4339741","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0009791^biological_process^post-embryonic development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN42340_c0_g1","leaves S. yangii","roots S. yangii",1.02258899339918,"0.000137601554699159","0.000207377409123835","TRINITY_DN42340_c0_g1_i1","SD31_ARATH^SD31_ARATH^Q:710-2854,H:36-741^34.72%ID^E:2e-122^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42340_c0_g1_i1.p1","503-2920[+]","SD31_ARATH^SD31_ARATH^Q:71-784,H:37-741^35.18%ID^E:1e-129^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^124-202^E:8.6e-19`PF00954.17^S_locus_glycop^S-locus glycoprotein domain^275-334^E:7.5e-12`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^553-690^E:3e-20`PF00069.22^Pkinase^Protein kinase domain^553-693^E:6.1e-19",".",".","ENOG4111B0F^G-type lectin S-receptor-like serine threonine-protein kinase SD3-1-like","KEGG:ath:AT2G41890","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46392_c0_g1","leaves S. yangii","roots S. yangii",1.01734781421983,{"v":7584987354.39859,"d":"7.58E+09"},"0.000116238912216651","TRINITY_DN46392_c0_g1_i14","IRK_ARATH^IRK_ARATH^Q:730-497,H:378-451^46.15%ID^E:2e-22^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:443-231,H:480-550^45.07%ID^E:2e-22^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:449-270,H:269-328^45%ID^E:4e-19^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:730-539,H:169-232^50%ID^E:4e-19^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:449-270,H:382-441^51.67%ID^E:5e-16^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:730-506,H:289-362^42.67%ID^E:5e-16^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:715-440,H:479-570^42.39%ID^E:7e-16^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:449-243,H:197-263^40.58%ID^E:4e-13^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:730-539,H:95-160^43.94%ID^E:4e-13^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:443-267,H:408-466^47.46%ID^E:4e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:730-485,H:313-393^36.59%ID^E:4e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:730-494,H:217-301^36.47%ID^E:3e-11^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:449-264,H:317-395^36.71%ID^E:3e-11^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:449-270,H:221-280^38.33%ID^E:2e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:730-533,H:120-186^39.13%ID^E:2e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:449-267,H:173-233^45.9%ID^E:5e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:721-452,H:74-167^38.3%ID^E:5e-10^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:727-539,H:266-328^42.86%ID^E:2e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:440-270,H:457-513^50.88%ID^E:8e-07^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IRK_ARATH^IRK_ARATH^Q:721-512,H:196-263^41.43%ID^E:1e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase IRK {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46392_c0_g1_i14.p1","395-730[-]","PSKR1_DAUCA^PSKR1_DAUCA^Q:1-85,H:559-643^54.12%ID^E:3e-20^RecName: Full=Phytosulfokine receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus`PSKR1_DAUCA^PSKR1_DAUCA^Q:4-63,H:187-246^43.33%ID^E:2e-06^RecName: Full=Phytosulfokine receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF13855.3^LRR_8^Leucine rich repeat^1-59^E:1.1e-09`PF00560.30^LRR_1^Leucine Rich Repeat^1-22^E:0.32",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46298_c3_g2","leaves S. yangii","roots S. yangii",1.00812455206054,"0.0341185193164775","0.0425333247611305","TRINITY_DN46298_c3_g2_i3","R1A6_SOLDE^R1A6_SOLDE^Q:706-71,H:536-746^26.05%ID^E:8e-09^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46298_c3_g2_i3.p1","2-1216[-]","RPP13_ARATH^RPP13_ARATH^Q:189-379,H:190-384^27.27%ID^E:1e-10^RecName: Full=Disease resistance protein RPP13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^179-390^E:1.7e-21",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G46530","GO:0005737^cellular_component^cytoplasm`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009814^biological_process^defense response, incompatible interaction`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44865_c3_g3","leaves S. yangii","roots S. yangii",1.00704288091516,"0.0277599102191214","0.0349291906171507","TRINITY_DN44865_c3_g3_i1","PPR38_ARATH^PPR38_ARATH^Q:414-836,H:70-209^40.43%ID^E:1e-28^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:408-902,H:278-441^26.06%ID^E:5e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:408-902,H:348-511^26.06%ID^E:3e-10^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:408-833,H:313-453^29.58%ID^E:9e-09^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:408-902,H:173-336^23.64%ID^E:5e-06^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:402-902,H:381-546^25.75%ID^E:9e-06^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44865_c3_g3_i1.p1","243-902[+]","PPR38_ARATH^PPR38_ARATH^Q:58-220,H:70-231^39.88%ID^E:5e-36^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:58-220,H:280-441^26.38%ID^E:1e-13^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:55-220,H:347-511^25.9%ID^E:3e-13^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:56-220,H:313-476^27.88%ID^E:6e-12^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:54-220,H:381-546^25.75%ID^E:7e-11^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:56-220,H:173-336^23.64%ID^E:1e-08^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^63-107^E:0.00062`PF13041.3^PPR_2^PPR repeat family^74-122^E:2.5e-09`PF01535.17^PPR^PPR repeat^78-106^E:0.55`PF12854.4^PPR_1^PPR repeat^141-171^E:9.6e-08`PF01535.17^PPR^PPR repeat^148-174^E:0.05`PF01535.17^PPR^PPR repeat^187-211^E:0.28",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12700","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN44780_c6_g1","leaves S. yangii","roots S. yangii",1.00583523541991,"0.0208188623251332","0.0265566357432071","TRINITY_DN44780_c6_g1_i1","PP219_ARATH^PP219_ARATH^Q:129-2120,H:14-685^54.76%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g08820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44780_c6_g1_i1.p1","96-2123[+]","PP219_ARATH^PP219_ARATH^Q:12-675,H:14-685^54.76%ID^E:0^RecName: Full=Putative pentatricopeptide repeat-containing protein At3g08820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^69-97^E:0.00048`PF01535.17^PPR^PPR repeat^142-167^E:0.043`PF13041.3^PPR_2^PPR repeat family^165-205^E:7.8e-08`PF01535.17^PPR^PPR repeat^168-197^E:0.0012`PF01535.17^PPR^PPR repeat^241-268^E:0.00029`PF01535.17^PPR^PPR repeat^269-298^E:5.2e-07`PF01535.17^PPR^PPR repeat^342-368^E:0.0018`PF01535.17^PPR^PPR repeat^370-399^E:0.015`PF01535.17^PPR^PPR repeat^442-467^E:0.081`PF14432.3^DYW_deaminase^DYW family of nucleic acid deaminases^542-664^E:4.2e-42",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G08820",".","GO:0008270^molecular_function^zinc ion binding",".","."]
["TRINITY_DN44020_c3_g2","leaves S. yangii","roots S. yangii",-1.00579698717444,"0.000178046228968696","0.000266697395380113","TRINITY_DN44020_c3_g2_i5","BGAL_SOLLC^BGAL_SOLLC^Q:1021-107,H:16-320^91.8%ID^E:0^RecName: Full=Beta-galactosidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44020_c3_g2_i5.p1","68-1078[-]","BGAL_SOLLC^BGAL_SOLLC^Q:20-324,H:16-320^91.8%ID^E:0^RecName: Full=Beta-galactosidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF01301.16^Glyco_hydro_35^Glycosyl hydrolases family 35^35-326^E:1.4e-113`PF02449.12^Glyco_hydro_42^Beta-galactosidase^55-203^E:3.4e-10","sigP:1^26^0.83^YES",".","COG1874^beta-galactosidase","KEGG:sly:544167","GO:0005618^cellular_component^cell wall`GO:0004565^molecular_function^beta-galactosidase activity`GO:0030246^molecular_function^carbohydrate binding`GO:0005975^biological_process^carbohydrate metabolic process","GO:0004565^molecular_function^beta-galactosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0009341^cellular_component^beta-galactosidase complex",".","."]
["TRINITY_DN47718_c2_g8","leaves S. yangii","roots S. yangii",-1.01797405991139,"0.00516342879423717","0.00695253830991393","TRINITY_DN47718_c2_g8_i1","R1B16_SOLDE^R1B16_SOLDE^Q:33-284,H:1151-1234^42.86%ID^E:4e-12^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47718_c2_g8_i1.p1","3-320[+]","R1B16_SOLDE^R1B16_SOLDE^Q:11-94,H:1151-1234^42.86%ID^E:3e-12^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN44559_c0_g3","leaves S. yangii","roots S. yangii",-1.02170080366864,"0.00254645703426754","0.00351111948420296","TRINITY_DN44559_c0_g3_i1","FLS2_ARATH^FLS2_ARATH^Q:146-2149,H:37-721^32.43%ID^E:3e-56^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:371-1852,H:256-748^31.38%ID^E:3e-47^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:260-1540,H:340-765^29.8%ID^E:5e-28^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1415-2152,H:98-336^34.55%ID^E:6e-23^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:350-781,H:609-768^37.5%ID^E:3e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44559_c0_g3_i1.p1","2-2155[+]","FLS2_ARATH^FLS2_ARATH^Q:15-716,H:1-721^32.21%ID^E:1e-70^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:82-617,H:167-748^31.07%ID^E:3e-57^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:87-559,H:340-763^30.82%ID^E:8e-46^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:472-717,H:98-336^34.55%ID^E:5e-25^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:88-260,H:580-768^36.51%ID^E:2e-19^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^41-78^E:1.3e-14`PF13516.3^LRR_6^Leucine Rich repeat^107-120^E:1.8`PF00560.30^LRR_1^Leucine Rich Repeat^192-213^E:0.031`PF13516.3^LRR_6^Leucine Rich repeat^405-416^E:2`PF13855.3^LRR_8^Leucine rich repeat^471-530^E:2.8e-07`PF00560.30^LRR_1^Leucine Rich Repeat^495-517^E:0.18`PF00560.30^LRR_1^Leucine Rich Repeat^593-614^E:0.067",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G46330`KO:K13420","GO:0005768^cellular_component^endosome`GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004675^molecular_function^transmembrane receptor protein serine/threonine kinase activity`GO:0052544^biological_process^defense response by callose deposition in cell wall`GO:0042742^biological_process^defense response to bacterium`GO:0016045^biological_process^detection of bacterium`GO:0006898^biological_process^receptor-mediated endocytosis`GO:0010359^biological_process^regulation of anion channel activity`GO:0007178^biological_process^transmembrane receptor protein serine/threonine kinase signaling pathway","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN75207_c0_g1","leaves S. yangii","roots S. yangii",-1.02408567238618,"0.00824702861570793","0.0108993327789671","TRINITY_DN75207_c0_g1_i1","WRK75_ARATH^WRK75_ARATH^Q:376-101,H:54-145^80.43%ID^E:1e-49^RecName: Full=Probable WRKY transcription factor 75;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN75207_c0_g1_i1.p1","98-757[-]","WRK75_ARATH^WRK75_ARATH^Q:128-219,H:54-145^80.43%ID^E:4e-50^RecName: Full=Probable WRKY transcription factor 75;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^141-198^E:5.6e-27",".",".","ENOG410YM5M^WRKY","KEGG:ath:AT5G13080","GO:0005634^cellular_component^nucleus`GO:0001046^molecular_function^core promoter sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0010055^biological_process^atrichoblast differentiation`GO:0048527^biological_process^lateral root development`GO:0000122^biological_process^negative regulation of transcription from RNA polymerase II promoter`GO:0043620^biological_process^regulation of DNA-templated transcription in response to stress`GO:0032107^biological_process^regulation of response to nutrient levels`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44244_c0_g1","leaves S. yangii","roots S. yangii",-1.02898830015264,"0.00342773288427092","0.00467629141023489","TRINITY_DN44244_c0_g1_i4","FAN1_ORYSJ^FAN1_ORYSJ^Q:23-838,H:1-298^31.58%ID^E:2e-24^RecName: Full=Fanconi-associated nuclease 1 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44244_c0_g1_i4.p1","2-847[+]","FAN1_ORYSJ^FAN1_ORYSJ^Q:8-279,H:1-298^33.23%ID^E:1e-28^RecName: Full=Fanconi-associated nuclease 1 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08797.8^HIRAN^HIRAN domain^211-279^E:1e-11",".",".","ENOG410XRN3^FANCD2 FANCI-associated nuclease 1","KEGG:osa:4340269`KO:K15363","GO:0003677^molecular_function^DNA binding`GO:0016818^molecular_function^hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides`GO:0004528^molecular_function^phosphodiesterase I activity`GO:0008270^molecular_function^zinc ion binding`GO:0006281^biological_process^DNA repair","GO:0003676^molecular_function^nucleic acid binding`GO:0008270^molecular_function^zinc ion binding`GO:0016818^molecular_function^hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides",".","."]
["TRINITY_DN42306_c0_g1","leaves S. yangii","roots S. yangii",-1.03079218579023,"0.000804316591083811","0.0011508711539905","TRINITY_DN42306_c0_g1_i4","PARP3_SOYBN^PARP3_SOYBN^Q:321-2825,H:2-805^62.56%ID^E:0^RecName: Full=Poly [ADP-ribose] polymerase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN42306_c0_g1_i4.p1","642-2855[+]","PARP3_SOYBN^PARP3_SOYBN^Q:1-728,H:77-805^66.67%ID^E:0^RecName: Full=Poly [ADP-ribose] polymerase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF08063.9^PADR1^PADR1 (NUC008) domain^21-70^E:7.3e-17`PF00533.23^BRCT^BRCA1 C Terminus (BRCT) domain^109-185^E:1.7e-10`PF05406.12^WGR^WGR domain^257-335^E:1.3e-09`PF02877.11^PARP_reg^Poly(ADP-ribose) polymerase, regulatory domain^374-507^E:1.4e-16`PF00644.17^PARP^Poly(ADP-ribose) polymerase catalytic domain^510-724^E:7.5e-47",".",".","ENOG410XP18^Poly (ADP-ribose) polymerase","KEGG:gmx:548024`KO:K10798","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003910^molecular_function^DNA ligase (ATP) activity`GO:0003950^molecular_function^NAD+ ADP-ribosyltransferase activity`GO:0051103^biological_process^DNA ligation involved in DNA repair`GO:0006273^biological_process^lagging strand elongation`GO:0006471^biological_process^protein ADP-ribosylation","GO:0003950^molecular_function^NAD+ ADP-ribosyltransferase activity`GO:0006471^biological_process^protein ADP-ribosylation",".","."]
["TRINITY_DN46893_c3_g3","leaves S. yangii","roots S. yangii",-1.03257267790848,"0.000286629615915781","0.000423307058260603","TRINITY_DN46893_c3_g3_i1","LRKS4_ARATH^LRKS4_ARATH^Q:85-402,H:99-204^56.07%ID^E:1e-30^RecName: Full=L-type lectin-domain containing receptor kinase S.4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46893_c3_g3_i1.p1","1-411[+]","LRKS4_ARATH^LRKS4_ARATH^Q:29-134,H:99-204^56.07%ID^E:2e-30^RecName: Full=L-type lectin-domain containing receptor kinase S.4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00139.16^Lectin_legB^Legume lectin domain^28-134^E:2.7e-26",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G55550","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN44226_c6_g4","leaves S. yangii","roots S. yangii",-1.03568249640035,"0.000394766458625363","0.000577502713241744","TRINITY_DN44226_c6_g4_i1","FK113_ARATH^FK113_ARATH^Q:1362-145,H:8-412^59.56%ID^E:2e-124^RecName: Full=F-box/kelch-repeat protein At5g26960;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44226_c6_g4_i1.p1","139-1398[-]","FK113_ARATH^FK113_ARATH^Q:7-418,H:2-412^59.62%ID^E:8e-164^RecName: Full=F-box/kelch-repeat protein At5g26960;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^46-91^E:2.5e-09`PF01344.22^Kelch_1^Kelch motif^184-224^E:6.9e-09",".",".","ENOG4110X8D^Kelch repeat-containing F-box family protein","KEGG:ath:AT5G26960",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN87673_c0_g1","leaves S. yangii","roots S. yangii",-1.03899945797447,"0.0384500995207174","0.0476538938995468","TRINITY_DN87673_c0_g1_i1","Y1124_ARATH^Y1124_ARATH^Q:592-3144,H:25-879^61.57%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g12460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87673_c0_g1_i1.p1","511-3156[+]","Y1124_ARATH^Y1124_ARATH^Q:12-878,H:6-879^61.6%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g12460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^28-67^E:2.9e-07`PF13855.3^LRR_8^Leucine rich repeat^287-346^E:8.7e-07`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^599-872^E:6.3e-33`PF00069.22^Pkinase^Protein kinase domain^599-870^E:4.9e-32","sigP:1^29^0.652^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G12460","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46100_c0_g1","leaves S. yangii","roots S. yangii",-1.03970667138817,"0.000737958447386632","0.00105833505889565","TRINITY_DN46100_c0_g1_i4","LEUC_ARATH^LEUC_ARATH^Q:783-532,H:150-233^91.67%ID^E:2e-45^RecName: Full=3-isopropylmalate dehydratase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LEUC_ARATH^LEUC_ARATH^Q:537-379,H:410-464^78.18%ID^E:3e-20^RecName: Full=3-isopropylmalate dehydratase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46100_c0_g1_i4.p1","298-783[-]","LEUC_ARATH^LEUC_ARATH^Q:1-84,H:150-233^91.67%ID^E:4e-47^RecName: Full=3-isopropylmalate dehydratase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LEUC_ARATH^LEUC_ARATH^Q:83-135,H:410-464^78.18%ID^E:2e-21^RecName: Full=3-isopropylmalate dehydratase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00330.17^Aconitase^Aconitase family (aconitate hydratase)^22-84^E:4.7e-13",".",".","COG0065^Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (By similarity)","KEGG:ath:AT4G13430`KO:K01703","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0003861^molecular_function^3-isopropylmalate dehydratase activity`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0050486^molecular_function^intramolecular transferase activity, transferring hydroxy groups`GO:0046872^molecular_function^metal ion binding`GO:0019761^biological_process^glucosinolate biosynthetic process`GO:0009098^biological_process^leucine biosynthetic process`GO:0046686^biological_process^response to cadmium ion","GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45134_c1_g3","leaves S. yangii","roots S. yangii",-1.04237241915621,"0.000929878568671482","0.00132344085291099","TRINITY_DN45134_c1_g3_i1","ERF34_ARATH^ERF34_ARATH^Q:670-218,H:115-292^51.12%ID^E:6e-40^RecName: Full=Ethylene-responsive transcription factor ERF034;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45134_c1_g3_i1.p1","203-613[-]","ERF34_ARATH^ERF34_ARATH^Q:1-132,H:134-292^46.54%ID^E:2e-28^RecName: Full=Ethylene-responsive transcription factor ERF034;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YIZG^Transcription factor","KEGG:ath:AT2G44940","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46917_c2_g1","leaves S. yangii","roots S. yangii",-1.05051866136941,"0.000330634485606859","0.000486178183089572","TRINITY_DN46917_c2_g1_i1","BCCP2_ARATH^BCCP2_ARATH^Q:131-766,H:43-255^53.99%ID^E:2e-48^RecName: Full=Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46917_c2_g1_i1.p1","272-769[+]","BCCP2_ARATH^BCCP2_ARATH^Q:1-165,H:90-255^67.07%ID^E:2e-65^RecName: Full=Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00364.19^Biotin_lipoyl^Biotin-requiring enzyme^91-163^E:1.1e-25",".",".","COG0511^Acetyl-CoA carboxylase, biotin carboxyl carrier protein","KEGG:ath:AT5G15530`KO:K02160","GO:0009317^cellular_component^acetyl-CoA carboxylase complex`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0003989^molecular_function^acetyl-CoA carboxylase activity`GO:0006633^biological_process^fatty acid biosynthetic process",".",".","."]
["TRINITY_DN47033_c0_g1","leaves S. yangii","roots S. yangii",-1.05466840334166,"0.00036013458464887","0.000528256329203813","TRINITY_DN47033_c0_g1_i11","AB13C_ARATH^AB13C_ARATH^Q:332-4612,H:24-1409^61.94%ID^E:0^RecName: Full=ABC transporter C family member 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47033_c0_g1_i11.p1","368-4621[+]","AB13C_ARATH^AB13C_ARATH^Q:9-1415,H:50-1409^62.11%ID^E:0^RecName: Full=ABC transporter C family member 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00664.20^ABC_membrane^ABC transporter transmembrane region^246-512^E:6.3e-23`PF00005.24^ABC_tran^ABC transporter^586-718^E:1.7e-15`PF00664.20^ABC_membrane^ABC transporter transmembrane region^860-1105^E:1e-39`PF00005.24^ABC_tran^ABC transporter^1197-1344^E:6e-28",".",".","COG1132^(ABC) transporter","KEGG:ath:AT2G07680","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0008559^molecular_function^xenobiotic-transporting ATPase activity","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN42556_c0_g1","leaves S. yangii","roots S. yangii",-1.05766000152952,"0.00428393921251478","0.00580600196993416","TRINITY_DN42556_c0_g1_i1","ENL1_ARATH^ENL1_ARATH^Q:281-493,H:66-136^52.11%ID^E:4e-17^RecName: Full=Early nodulin-like protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42556_c0_g1_i1.p1","254-1306[+]","ENL2_ARATH^ENL2_ARATH^Q:11-239,H:64-259^37.39%ID^E:7e-18^RecName: Full=Early nodulin-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02298.14^Cu_bind_like^Plastocyanin-like domain^10-69^E:2.4e-11",".",".","ENOG411137T^Plastocyanin-like domain","KEGG:ath:AT4G27520","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0009055^molecular_function^electron carrier activity","GO:0009055^molecular_function^electron carrier activity",".","."]
["TRINITY_DN46200_c2_g1","leaves S. yangii","roots S. yangii",-1.05945245039288,"0.000252764990919428","0.000374794104113084","TRINITY_DN46200_c2_g1_i3","Y4729_ARATH^Y4729_ARATH^Q:498-28,H:4-163^46.34%ID^E:7e-32^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46200_c2_g1_i3.p1","1-522[-]","Y4729_ARATH^Y4729_ARATH^Q:9-165,H:4-163^48.17%ID^E:2e-32^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^79-167^E:1.7e-26","sigP:1^20^0.706^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27290","GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen",".",".","."]
["TRINITY_DN47682_c4_g2","leaves S. yangii","roots S. yangii",-1.06673139608828,"0.000122348897618433","0.000184945665259136","TRINITY_DN47682_c4_g2_i2","R1B16_SOLDE^R1B16_SOLDE^Q:16-282,H:1151-1238^42.7%ID^E:3e-13^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47682_c4_g2_i2.p1","1-309[+]","R1B16_SOLDE^R1B16_SOLDE^Q:6-102,H:1151-1246^40.21%ID^E:1e-14^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46264_c0_g1","leaves S. yangii","roots S. yangii",-1.07436604039606,"0.00111386090343288","0.00157573017094429","TRINITY_DN46264_c0_g1_i2","SPDE_COFAR^SPDE_COFAR^Q:1261-260,H:7-316^78.64%ID^E:0^RecName: Full=Spermidine synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea",".","TRINITY_DN46264_c0_g1_i2.p1","494-1270[-]","SPDE_COFAR^SPDE_COFAR^Q:4-248,H:7-251^88.16%ID^E:2e-161^RecName: Full=Spermidine synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea","PF01564.14^Spermine_synth^Spermine/spermidine synthase^23-251^E:4.4e-95",".",".",".",".","GO:0004766^molecular_function^spermidine synthase activity`GO:0008295^biological_process^spermidine biosynthetic process",".",".","."]
["TRINITY_DN46405_c0_g1","leaves S. yangii","roots S. yangii",-1.07454806357811,"0.000284246130354976","0.00041991057731272","TRINITY_DN46405_c0_g1_i3","GSXL9_ARATH^GSXL9_ARATH^Q:1472-123,H:2-457^69.58%ID^E:0^RecName: Full=Flavin-containing monooxygenase FMO GS-OX-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46405_c0_g1_i3.p1","96-1466[-]","GSXL9_ARATH^GSXL9_ARATH^Q:3-448,H:8-457^70.04%ID^E:0^RecName: Full=Flavin-containing monooxygenase FMO GS-OX-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00743.16^FMO-like^Flavin-binding monooxygenase-like^9-237^E:3.2e-35`PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^9-296^E:7.7e-22`PF01266.21^DAO^FAD dependent oxidoreductase^10-46^E:3.8e-06`PF03486.11^HI0933_like^HI0933-like protein^10-227^E:1.8e-08`PF01494.16^FAD_binding_3^FAD binding domain^10-41^E:8.6e-07`PF00890.21^FAD_binding_2^FAD binding domain^11-46^E:8.3e-07`PF13450.3^NAD_binding_8^NAD(P)-binding Rossmann-like domain^13-48^E:3.4e-10`PF13738.3^Pyr_redox_3^Pyridine nucleotide-disulphide oxidoreductase^75-309^E:1e-17`PF13434.3^K_oxygenase^L-lysine 6-monooxygenase (NADPH-requiring)^110-230^E:1.5e-07`PF00743.16^FMO-like^Flavin-binding monooxygenase-like^255-377^E:1.1e-15",".",".","COG2072^Monooxygenase","KEGG:ath:AT5G07800","GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0004499^molecular_function^N,N-dimethylaniline monooxygenase activity`GO:0050661^molecular_function^NADP binding","GO:0004499^molecular_function^N,N-dimethylaniline monooxygenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0050661^molecular_function^NADP binding`GO:0055114^biological_process^oxidation-reduction process`GO:0016491^molecular_function^oxidoreductase activity`GO:0071949^molecular_function^FAD binding",".","."]
["TRINITY_DN45091_c3_g4","leaves S. yangii","roots S. yangii",-1.0891366181153,"0.000602580505938666","0.000869851042682586","TRINITY_DN45091_c3_g4_i8","Y5248_ARATH^Y5248_ARATH^Q:2841-304,H:5-872^62.4%ID^E:0^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45091_c3_g4_i8.p1","301-2937[-]","Y5248_ARATH^Y5248_ARATH^Q:33-878,H:5-872^62.78%ID^E:0^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^102-193^E:6.4e-24`PF00954.17^S_locus_glycop^S-locus glycoprotein domain^289-363^E:5.1e-09`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^545-818^E:3.2e-39`PF00069.22^Pkinase^Protein kinase domain^546-758^E:3.6e-45",".",".","ENOG410YAJI^G-type lectin S-receptor-like serine threonine-protein kinase","KEGG:ath:AT5G24080","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN47683_c1_g1","leaves S. yangii","roots S. yangii",-1.09557510796595,"0.000292331817908365","0.000431423657878761","TRINITY_DN47683_c1_g1_i3","Y3475_ARATH^Y3475_ARATH^Q:411-7,H:676-828^43.79%ID^E:2e-26^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47683_c1_g1_i3.p1","1-426[-]","Y3475_ARATH^Y3475_ARATH^Q:6-140,H:676-828^43.79%ID^E:2e-26^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^29-141^E:1.1e-15`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^32-141^E:9.4e-19",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN35873_c0_g1","leaves S. yangii","roots S. yangii",-1.09633156345454,"0.00281690091207748","0.0038701929973446","TRINITY_DN35873_c0_g1_i1","B561P_ARATH^B561P_ARATH^Q:191-1132,H:44-347^34.49%ID^E:2e-43^RecName: Full=Cytochrome b561 and DOMON domain-containing protein At5g35735;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35873_c0_g1_i1.p1","59-1273[+]","B561P_ARATH^B561P_ARATH^Q:45-377,H:44-366^35.22%ID^E:2e-60^RecName: Full=Cytochrome b561 and DOMON domain-containing protein At5g35735;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04526.10^DUF568^Protein of unknown function (DUF568)^91-198^E:2e-15","sigP:1^25^0.723^YES",".","ENOG410Y10S^auxin-responsive protein","KEGG:ath:AT5G35735","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process",".",".","."]
["TRINITY_DN46171_c2_g2","leaves S. yangii","roots S. yangii",-1.096674515412,{"v":9142708953.88459,"d":"9.14E+09"},"0.000139235040904598","TRINITY_DN46171_c2_g2_i1","Y1848_ARATH^Y1848_ARATH^Q:404-1330,H:54-397^48.28%ID^E:3e-67^RecName: Full=Probable inactive receptor kinase At1g48480;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46171_c2_g2_i1.p1","257-1330[+]","Y1848_ARATH^Y1848_ARATH^Q:28-358,H:32-397^48.65%ID^E:2e-96^RecName: Full=Probable inactive receptor kinase At1g48480;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^30-66^E:5.4e-08`PF13855.3^LRR_8^Leucine rich repeat^85-130^E:2.4e-08`PF13855.3^LRR_8^Leucine rich repeat^121-180^E:1.9e-06","sigP:1^27^0.804^YES",".","ENOG410Y9HF^Inactive receptor kinase","KEGG:ath:AT1G48480","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005774^cellular_component^vacuolar membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46414_c3_g1","leaves S. yangii","roots S. yangii",-1.10016280381531,"0.013944303269544","0.0180906862516788","TRINITY_DN46414_c3_g1_i2","PLP2_ARATH^PLP2_ARATH^Q:1645-482,H:13-400^53.33%ID^E:2e-135^RecName: Full=Patatin-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46414_c3_g1_i2.p1","461-1657[-]","PLP2_ARATH^PLP2_ARATH^Q:5-392,H:13-400^53.33%ID^E:4e-142^RecName: Full=Patatin-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01734.19^Patatin^Patatin-like phospholipase^14-218^E:3e-22",".",".","COG3621^Patatin group","KEGG:ath:AT2G26560","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0047372^molecular_function^acylglycerol lipase activity`GO:0016298^molecular_function^lipase activity`GO:0004620^molecular_function^phospholipase activity`GO:0071456^biological_process^cellular response to hypoxia`GO:0051607^biological_process^defense response to virus`GO:0016042^biological_process^lipid catabolic process`GO:0006629^biological_process^lipid metabolic process`GO:0031408^biological_process^oxylipin biosynthetic process`GO:0009626^biological_process^plant-type hypersensitive response`GO:0046686^biological_process^response to cadmium ion","GO:0006629^biological_process^lipid metabolic process",".","."]
["TRINITY_DN47562_c0_g4","leaves S. yangii","roots S. yangii",-1.10134130394936,"0.00178018862270789","0.00248004961005202","TRINITY_DN47562_c0_g4_i2","SLSG6_BRAOL^SLSG6_BRAOL^Q:9-467,H:154-308^41.4%ID^E:2e-28^RecName: Full=S-locus-specific glycoprotein S6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN47562_c0_g4_i2.p1","63-476[+]","Y4729_ARATH^Y4729_ARATH^Q:7-134,H:170-298^32.56%ID^E:2e-18^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00954.17^S_locus_glycop^S-locus glycoprotein domain^49-136^E:2.3e-11",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G27290","GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0048544^biological_process^recognition of pollen",".","."]
["TRINITY_DN44228_c0_g1","leaves S. yangii","roots S. yangii",-1.10330941016489,"0.00659001459048789","0.00878902089402583","TRINITY_DN44228_c0_g1_i1","MAD2_ARATH^MAD2_ARATH^Q:196-894,H:1-208^76.92%ID^E:6e-123^RecName: Full=Mitotic spindle checkpoint protein MAD2 {ECO:0000303|PubMed:19710914};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44228_c0_g1_i1.p1","196-672[+]","MAD2_MAIZE^MAD2_MAIZE^Q:1-149,H:1-149^86.58%ID^E:4e-90^RecName: Full=Mitotic spindle checkpoint protein MAD2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF02301.15^HORMA^HORMA domain^16-147^E:9.4e-18",".",".","ENOG410XSD7^mitotic spindle","KEGG:zma:542621`KO:K02537","GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0007067^biological_process^mitotic nuclear division`GO:0007094^biological_process^mitotic spindle assembly checkpoint",".",".","."]
["TRINITY_DN44477_c0_g2","leaves S. yangii","roots S. yangii",-1.11073392419849,"0.000156959165738929","0.000235814608679607","TRINITY_DN44477_c0_g2_i1","RGA3_SOLBU^RGA3_SOLBU^Q:120-401,H:529-625^39.18%ID^E:6e-09^RecName: Full=Putative disease resistance protein RGA3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44477_c0_g2_i1.p1","3-440[+]","RGA3_SOLBU^RGA3_SOLBU^Q:40-146,H:529-638^41.82%ID^E:4e-13^RecName: Full=Putative disease resistance protein RGA3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN9829_c0_g1","leaves S. yangii","roots S. yangii",-1.11157885814698,"0.031921255467345","0.0399230453108986","TRINITY_DN9829_c0_g1_i1","E1314_ARATH^E1314_ARATH^Q:210-1250,H:30-378^46.42%ID^E:1e-109^RecName: Full=Glucan endo-1,3-beta-glucosidase 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN9829_c0_g1_i1.p1","90-1262[+]","E1314_ARATH^E1314_ARATH^Q:41-387,H:30-378^46.42%ID^E:6e-111^RecName: Full=Glucan endo-1,3-beta-glucosidase 14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^41-359^E:1e-92","sigP:1^35^0.698^YES",".","ENOG410YA4N^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT2G27500","GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005618^cellular_component^cell wall`GO:0005737^cellular_component^cytoplasm`GO:0005576^cellular_component^extracellular region`GO:0005634^cellular_component^nucleus`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47155_c6_g4","leaves S. yangii","roots S. yangii",-1.11329709792166,"0.00269544486711984","0.00370921118524097","TRINITY_DN47155_c6_g4_i5","KATAM_ARATH^KATAM_ARATH^Q:304-1500,H:149-543^37.41%ID^E:9e-87^RecName: Full=Xyloglucan galactosyltransferase KATAMARI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47155_c6_g4_i5.p1","1-1518[+]","KATAM_ARATH^KATAM_ARATH^Q:102-500,H:149-543^37.41%ID^E:5e-92^RecName: Full=Xyloglucan galactosyltransferase KATAMARI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03016.12^Exostosin^Exostosin family^104-441^E:9.7e-63",".",".","ENOG410XTFH^Exostosin","KEGG:ath:AT2G20370","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0032580^cellular_component^Golgi cisterna membrane`GO:0030173^cellular_component^integral component of Golgi membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0010256^biological_process^endomembrane system organization`GO:0042353^biological_process^fucose biosynthetic process`GO:0006486^biological_process^protein glycosylation`GO:0009863^biological_process^salicylic acid mediated signaling pathway`GO:0009826^biological_process^unidimensional cell growth`GO:0009969^biological_process^xyloglucan biosynthetic process",".",".","."]
["TRINITY_DN44758_c5_g1","leaves S. yangii","roots S. yangii",-1.1200047084202,"0.00240006048213894","0.00331465657573561","TRINITY_DN44758_c5_g1_i1","RNG1L_ARATH^RNG1L_ARATH^Q:302-117,H:196-262^41.79%ID^E:6e-11^RecName: Full=E3 ubiquitin-protein ligase RING1-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44758_c5_g1_i1.p1","93-446[-]","RNG1L_ARATH^RNG1L_ARATH^Q:29-110,H:176-262^35.63%ID^E:1e-13^RecName: Full=E3 ubiquitin-protein ligase RING1-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^63-105^E:8.4e-12`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^63-104^E:3e-10`PF17123.2^zf-RING_11^RING-like zinc finger^63-91^E:2.8e-08`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^64-102^E:2.8e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^64-104^E:1.8e-06",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT3G19950`KO:K11982","GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47571_c3_g4","leaves S. yangii","roots S. yangii",-1.12015859556798,{"v":7689750432.30187,"d":"7.69E+09"},"0.000117808422470574","TRINITY_DN47571_c3_g4_i1","NAC41_ARATH^NAC41_ARATH^Q:52-531,H:1-162^47.56%ID^E:3e-42^RecName: Full=NAC domain-containing protein 41 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47571_c3_g4_i1.p1","52-645[+]","NAC41_ARATH^NAC41_ARATH^Q:1-160,H:1-162^47.56%ID^E:6e-44^RecName: Full=NAC domain-containing protein 41 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^15-134^E:1.5e-21",".",".","ENOG41107S8^NAC domain containing protein 41",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN39283_c0_g2","leaves S. yangii","roots S. yangii",-1.12436722452836,"0.00831183483216939","0.0109832459429298","TRINITY_DN39283_c0_g2_i1","H2AXA_ARATH^H2AXA_ARATH^Q:684-283,H:10-142^85.19%ID^E:8e-51^RecName: Full=Probable histone H2AXa;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39283_c0_g2_i1.p1","280-765[-]","H2AX_CICAR^H2AX_CICAR^Q:23-161,H:2-139^85%ID^E:9e-77^RecName: Full=Histone H2AX;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^22-113^E:2.1e-14`PF00808.20^CBFD_NFYB_HMF^Histone-like transcription factor (CBF/NF-Y) and archaeal histone^49-112^E:0.00014`PF16211.2^Histone_H2A_C^C-terminus of histone H2A^116-149^E:8.4e-18",".",".",".","KEGG:cam:101514555`KO:K11251","GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN44936_c6_g2","leaves S. yangii","roots S. yangii",-1.13267932785871,"0.000577442658172894","0.000835004376232034","TRINITY_DN44936_c6_g2_i7","UGAL2_ARATH^UGAL2_ARATH^Q:1453-791,H:18-237^52.91%ID^E:5e-58^RecName: Full=UDP-galactose transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UGAL2_ARATH^UGAL2_ARATH^Q:569-462,H:231-266^66.67%ID^E:2e-07^RecName: Full=UDP-galactose transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44936_c6_g2_i7.p1","788-1504[-]","UGAL2_ARATH^UGAL2_ARATH^Q:6-238,H:5-237^52.12%ID^E:1e-65^RecName: Full=UDP-galactose transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03151.13^TPT^Triose-phosphate Transporter family^23-203^E:3.9e-12",".",".","ENOG410XP1S^solute carrier family 35 member","KEGG:ath:AT1G76670","GO:0005793^cellular_component^endoplasmic reticulum-Golgi intermediate compartment`GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005457^molecular_function^GDP-fucose transmembrane transporter activity`GO:0022857^molecular_function^transmembrane transporter activity`GO:0005459^molecular_function^UDP-galactose transmembrane transporter activity`GO:0005460^molecular_function^UDP-glucose transmembrane transporter activity`GO:0015783^biological_process^GDP-fucose transport`GO:0009833^biological_process^plant-type primary cell wall biogenesis`GO:0009624^biological_process^response to nematode`GO:0072334^biological_process^UDP-galactose transmembrane transport`GO:0015786^biological_process^UDP-glucose transport",".",".","."]
["TRINITY_DN42448_c0_g1","leaves S. yangii","roots S. yangii",-1.13909260894296,"0.00352172372574954","0.00479993366759412","TRINITY_DN42448_c0_g1_i6","SRS2L_ARATH^SRS2L_ARATH^Q:186-3671,H:19-1147^56.14%ID^E:0^RecName: Full=ATP-dependent DNA helicase SRS2-like protein At4g25120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42448_c0_g1_i6.p1","120-3674[+]","SRS2L_ARATH^SRS2L_ARATH^Q:23-1184,H:19-1147^56.14%ID^E:0^RecName: Full=ATP-dependent DNA helicase SRS2-like protein At4g25120;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00580.18^UvrD-helicase^UvrD/REP helicase N-terminal domain^296-575^E:2.1e-58`PF13245.3^AAA_19^Part of AAA domain^312-379^E:3.5e-09`PF13361.3^UvrD_C^UvrD-like helicase C-terminal domain^581-959^E:3.4e-39`PF13538.3^UvrD_C_2^UvrD-like helicase C-terminal domain^894-957^E:2.6e-13",".",".","COG0210^helicase","KEGG:ath:AT4G25120","GO:0005634^cellular_component^nucleus`GO:0043138^molecular_function^3'-5' DNA helicase activity`GO:0005524^molecular_function^ATP binding`GO:0004003^molecular_function^ATP-dependent DNA helicase activity`GO:0003677^molecular_function^DNA binding`GO:0032508^biological_process^DNA duplex unwinding","GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN47404_c7_g2","leaves S. yangii","roots S. yangii",-1.14207241219775,"0.0102050781275991","0.0133821005690368","TRINITY_DN47404_c7_g2_i2","PSKR1_DAUCA^PSKR1_DAUCA^Q:1189-872,H:562-669^38.89%ID^E:4e-15^RecName: Full=Phytosulfokine receptor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN47404_c7_g2_i2.p1","665-1135[-]","BRL1_ARATH^BRL1_ARATH^Q:1-82,H:686-766^43.9%ID^E:8e-13^RecName: Full=Serine/threonine-protein kinase BRI1-like 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT1G55610","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0005496^molecular_function^steroid binding",".",".","."]
["TRINITY_DN46496_c3_g2","leaves S. yangii","roots S. yangii",-1.14270789079557,"0.0137821238335154","0.0178858299579017","TRINITY_DN46496_c3_g2_i10","SCAM4_ARATH^SCAM4_ARATH^Q:2107-1628,H:74-233^81.25%ID^E:3e-87^RecName: Full=Secretory carrier-associated membrane protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46496_c3_g2_i10.p1","1583-2107[-]","SCAM4_ARATH^SCAM4_ARATH^Q:1-160,H:74-233^81.25%ID^E:3e-94^RecName: Full=Secretory carrier-associated membrane protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04144.10^SCAMP^SCAMP family^19-162^E:1e-46",".",".","ENOG410XSJN^secretory carrier membrane protein","KEGG:ath:AT1G32050","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0030658^cellular_component^transport vesicle membrane`GO:0015031^biological_process^protein transport","GO:0015031^biological_process^protein transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46706_c3_g1","leaves S. yangii","roots S. yangii",-1.14870654911964,"0.0175096121885937","0.0225101801897929","TRINITY_DN46706_c3_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:533-1624,H:509-870^39.89%ID^E:4e-67^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum`R1A6_SOLDE^R1A6_SOLDE^Q:1863-2504,H:959-1164^26.87%ID^E:3e-06^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46706_c3_g1_i1.p1","149-1732[+]","R1A6_SOLDE^R1A6_SOLDE^Q:100-492,H:477-870^38.96%ID^E:9e-72^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^157-429^E:3.5e-70",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44280_c4_g3","leaves S. yangii","roots S. yangii",-1.15301993930943,"0.00016562387350355","0.000248416012995762","TRINITY_DN44280_c4_g3_i4","CDPK2_ARATH^CDPK2_ARATH^Q:1716-76,H:111-626^66.85%ID^E:0^RecName: Full=Calcium-dependent protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44280_c4_g3_i4.p2","4-591[-]","CDPK1_ARATH^CDPK1_ARATH^Q:1-172,H:419-590^75%ID^E:2e-85^RecName: Full=Calcium-dependent protein kinase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00036.29^EF-hand_1^EF hand^38-64^E:2.6e-08`PF13499.3^EF-hand_7^EF-hand domain pair^38-98^E:3.3e-11`PF13405.3^EF-hand_6^EF-hand domain^38-63^E:1e-06`PF13833.3^EF-hand_8^EF-hand domain pair^38-62^E:8.3e-05`PF13202.3^EF-hand_5^EF hand^38-59^E:0.0001`PF13833.3^EF-hand_8^EF-hand domain pair^53-100^E:2.2e-08`PF13202.3^EF-hand_5^EF hand^76-95^E:0.047`PF13499.3^EF-hand_7^EF-hand domain pair^109-168^E:1.7e-12`PF00036.29^EF-hand_1^EF hand^110-135^E:4.4e-07`PF13405.3^EF-hand_6^EF-hand domain^110-135^E:1.4e-07`PF13202.3^EF-hand_5^EF hand^112-132^E:4.1e-05`PF13833.3^EF-hand_8^EF-hand domain pair^123-169^E:3.7e-09`PF00036.29^EF-hand_1^EF hand^144-170^E:6e-09`PF13202.3^EF-hand_5^EF hand^145-168^E:0.00015",".",".","ENOG410XRMJ^calcium-dependent protein kinase","KEGG:ath:AT5G04870`KO:K13412","GO:0005778^cellular_component^peroxisomal membrane`GO:0005777^cellular_component^peroxisome`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0009931^molecular_function^calcium-dependent protein serine/threonine kinase activity`GO:0005516^molecular_function^calmodulin binding`GO:0004683^molecular_function^calmodulin-dependent protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0035556^biological_process^intracellular signal transduction`GO:0018105^biological_process^peptidyl-serine phosphorylation`GO:0046777^biological_process^protein autophosphorylation`GO:0006468^biological_process^protein phosphorylation","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN45233_c0_g1","leaves S. yangii","roots S. yangii",-1.15396674037432,"0.0067662695696663","0.00901594462781913","TRINITY_DN45233_c0_g1_i6","RPP1_ARATH^RPP1_ARATH^Q:71-367,H:738-828^36.36%ID^E:3e-06^RecName: Full=Probable disease resistance protein RPP1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45233_c0_g1_i6.p1","2-382[+]","RPP1_ARATH^RPP1_ARATH^Q:24-122,H:738-828^35.35%ID^E:1e-06^RecName: Full=Probable disease resistance protein RPP1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G44480","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0000139^cellular_component^Golgi membrane`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0030275^molecular_function^LRR domain binding`GO:0006952^biological_process^defense response`GO:0009817^biological_process^defense response to fungus, incompatible interaction`GO:0002239^biological_process^response to oomycetes`GO:0007165^biological_process^signal transduction",".",".","."]
["TRINITY_DN43991_c0_g3","leaves S. yangii","roots S. yangii",-1.16356679786835,"0.0105555694563821","0.0138243696418623","TRINITY_DN43991_c0_g3_i1","R1A6_SOLDE^R1A6_SOLDE^Q:897-292,H:1050-1246^29.81%ID^E:1e-14^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN43991_c0_g3_i1.p1","277-948[-]","R1A6_SOLDE^R1A6_SOLDE^Q:18-219,H:1050-1246^32.06%ID^E:3e-17^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46373_c1_g6","leaves S. yangii","roots S. yangii",-1.16418599332118,"0.00341281101329988","0.00465756186795225","TRINITY_DN46373_c1_g6_i2","PME_PRUPE^PME_PRUPE^Q:75-281,H:49-115^59.42%ID^E:7e-16^RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN46373_c1_g6_i2.p1","3-353[+]","PME_PRUPE^PME_PRUPE^Q:5-93,H:27-115^49.45%ID^E:1e-16^RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","sigP:1^16^0.832^YES",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0045330^molecular_function^aspartyl esterase activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0045490^biological_process^pectin catabolic process",".",".","."]
["TRINITY_DN44124_c0_g3","leaves S. yangii","roots S. yangii",-1.16624339246662,"0.000810197597131052","0.00115902176922994","TRINITY_DN44124_c0_g3_i1","GH31_ARATH^GH31_ARATH^Q:237-497,H:19-105^75.86%ID^E:5e-37^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44124_c0_g3_i1.p1","117-509[+]","GH31_ARATH^GH31_ARATH^Q:25-127,H:8-105^67.96%ID^E:1e-37^RecName: Full=Probable indole-3-acetic acid-amido synthetase GH3.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03321.10^GH3^GH3 auxin-responsive promoter^48-127^E:1.6e-25",".",".","ENOG410XQH0^Indole-3-acetic acid-amido synthetase","KEGG:ath:AT2G14960`KO:K14487","GO:0016874^molecular_function^ligase activity`GO:0009733^biological_process^response to auxin",".",".","."]
["TRINITY_DN44512_c2_g2","leaves S. yangii","roots S. yangii",-1.16804586483104,{"v":6978784999.10741,"d":"6.98E+09"},"0.000107217378841506","TRINITY_DN44512_c2_g2_i9","DTX14_ARATH^DTX14_ARATH^Q:131-1549,H:1-470^54.55%ID^E:2e-165^RecName: Full=Protein DETOXIFICATION 14 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX14_ARATH^DTX14_ARATH^Q:2031-2366,H:217-331^34.78%ID^E:2e-18^RecName: Full=Protein DETOXIFICATION 14 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44512_c2_g2_i9.p1","140-1573[+]","DTX14_ARATH^DTX14_ARATH^Q:1-470,H:1-470^54.78%ID^E:1e-180^RecName: Full=Protein DETOXIFICATION 14 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^36-195^E:3.2e-31`PF01554.15^MatE^MatE^257-419^E:6.9e-29",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G71140`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46287_c2_g10","leaves S. yangii","roots S. yangii",-1.17189665861285,"0.00907316700330295","0.0119552766520472","TRINITY_DN46287_c2_g10_i1","PDR1_TOBAC^PDR1_TOBAC^Q:2848-2,H:118-1071^75.68%ID^E:0^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:3234-2911,H:9-118^60.91%ID^E:1e-32^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:2680-1025,H:862-1376^23.59%ID^E:3e-30^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46287_c2_g10_i1.p1","2-2518[-]","PDR1_TOBAC^PDR1_TOBAC^Q:1-839,H:228-1071^75.27%ID^E:0^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:8-498,H:922-1376^22.09%ID^E:2e-21^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:620-833,H:164-410^25.91%ID^E:1e-18^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF01061.21^ABC2_membrane^ABC-2 type transporter^286-498^E:7.6e-39`PF08370.8^PDR_assoc^Plant PDR ABC transporter associated^507-563^E:5.7e-25`PF00005.24^ABC_tran^ABC transporter^633-785^E:4.9e-20",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN44287_c4_g2","leaves S. yangii","roots S. yangii",-1.17354308684327,"0.000402272092128883","0.00058813984410524","TRINITY_DN44287_c4_g2_i2","KIPK_ARATH^KIPK_ARATH^Q:3146-495,H:1-924^47.2%ID^E:0^RecName: Full=Serine/threonine-protein kinase KIPK;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44287_c4_g2_i2.p1","462-3146[-]","KIPK_ARATH^KIPK_ARATH^Q:1-894,H:1-934^47.46%ID^E:0^RecName: Full=Serine/threonine-protein kinase KIPK;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^510-663^E:1.1e-36`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^510-659^E:3.3e-20`PF00069.22^Pkinase^Protein kinase domain^739-842^E:5.6e-20`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^745-814^E:2.5e-07",".",".","ENOG410XQ0C^serine threonine-protein kinase","KEGG:ath:AT3G52890","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0035556^biological_process^intracellular signal transduction","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN35312_c0_g1","leaves S. yangii","roots S. yangii",-1.18020765198755,"0.0271232753846938","0.0341692545080204","TRINITY_DN35312_c0_g1_i2","Y1839_ARATH^Y1839_ARATH^Q:901-110,H:17-280^25.81%ID^E:4e-13^RecName: Full=Probable serine/threonine-protein kinase At1g18390;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35312_c0_g1_i2.p1","32-949[-]","Y1839_ARATH^Y1839_ARATH^Q:17-280,H:17-280^25.81%ID^E:3e-13^RecName: Full=Probable serine/threonine-protein kinase At1g18390;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14380.3^WAK_assoc^Wall-associated receptor kinase C-terminal^156-242^E:6.1e-17","sigP:1^24^0.544^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G18390","GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0071215^biological_process^cellular response to abscisic acid stimulus`GO:0042631^biological_process^cellular response to water deprivation`GO:0048573^biological_process^photoperiodism, flowering",".",".","."]
["TRINITY_DN25623_c0_g1","leaves S. yangii","roots S. yangii",-1.18477759285828,"0.00144112492834445","0.00202205474682614","TRINITY_DN25623_c0_g1_i1","PGLR5_ARATH^PGLR5_ARATH^Q:426-1532,H:69-436^46.77%ID^E:1e-100^RecName: Full=Probable polygalacturonase At1g80170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN25623_c0_g1_i1.p1","186-1556[+]","PGLR5_ARATH^PGLR5_ARATH^Q:47-449,H:32-436^45.97%ID^E:9e-122^RecName: Full=Probable polygalacturonase At1g80170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00295.14^Glyco_hydro_28^Glycosyl hydrolases family 28^96-416^E:1.4e-90`PF13229.3^Beta_helix^Right handed beta helix region^191-294^E:1.5e-05","sigP:1^22^0.855^YES",".","COG5434^Glycoside hydrolase family 28","KEGG:ath:AT1G80170","GO:0005576^cellular_component^extracellular region`GO:0009505^cellular_component^plant-type cell wall`GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization","GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45447_c8_g2","leaves S. yangii","roots S. yangii",-1.19302645346267,"0.00179221252621539","0.00249569224047838","TRINITY_DN45447_c8_g2_i1","UGT9_GARJA^UGT9_GARJA^Q:305-1486,H:5-398^46.73%ID^E:7e-91^RecName: Full=Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae; Gardenia",".","TRINITY_DN45447_c8_g2_i1.p1","533-1627[+]","UGT9_GARJA^UGT9_GARJA^Q:1-356,H:79-438^42.78%ID^E:3e-89^RecName: Full=Beta-D-glucosyl crocetin beta-1,6-glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae; Gardenia","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^174-319^E:7.2e-15",".",".",".",".","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46311_c1_g2","leaves S. yangii","roots S. yangii",-1.20381620587834,"0.00362040594928062","0.00493121887126982","TRINITY_DN46311_c1_g2_i4","VHAA1_ARATH^VHAA1_ARATH^Q:1419-1,H:282-756^77.05%ID^E:0^RecName: Full=V-type proton ATPase subunit a1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`VHAA1_ARATH^VHAA1_ARATH^Q:2378-1662,H:49-287^63.6%ID^E:3e-86^RecName: Full=V-type proton ATPase subunit a1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46311_c1_g2_i4.p1","1-1455[-]","VHAA1_ARATH^VHAA1_ARATH^Q:13-485,H:282-756^77.05%ID^E:0^RecName: Full=V-type proton ATPase subunit a1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01496.16^V_ATPase_I^V-type ATPase 116kDa subunit family^13-480^E:1.1e-188",".",".","COG1269^ATPase 116 kDa subunit","KEGG:ath:AT2G28520`KO:K02154","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0000325^cellular_component^plant-type vacuole`GO:0005802^cellular_component^trans-Golgi network`GO:0012510^cellular_component^trans-Golgi network transport vesicle membrane`GO:0016471^cellular_component^vacuolar proton-transporting V-type ATPase complex`GO:0000220^cellular_component^vacuolar proton-transporting V-type ATPase, V0 domain`GO:0005773^cellular_component^vacuole`GO:0051117^molecular_function^ATPase binding`GO:0046961^molecular_function^proton-transporting ATPase activity, rotational mechanism`GO:0015991^biological_process^ATP hydrolysis coupled proton transport`GO:0015986^biological_process^ATP synthesis coupled proton transport`GO:0070070^biological_process^proton-transporting V-type ATPase complex assembly`GO:0007035^biological_process^vacuolar acidification`GO:0070072^biological_process^vacuolar proton-transporting V-type ATPase complex assembly","GO:0015078^molecular_function^hydrogen ion transmembrane transporter activity`GO:0015991^biological_process^ATP hydrolysis coupled proton transport`GO:0033179^cellular_component^proton-transporting V-type ATPase, V0 domain",".","."]
["TRINITY_DN40316_c0_g1","leaves S. yangii","roots S. yangii",-1.20595811152598,{"v":8314782484.19244,"d":"8.31E+09"},"0.000127011857826583","TRINITY_DN40316_c0_g1_i1","RTM2B_ARATH^RTM2B_ARATH^Q:342-596,H:19-104^37.21%ID^E:2e-12^RecName: Full=Inactive protein RESTRICTED TEV MOVEMENT 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40316_c0_g1_i1.p1","228-1109[+]","RTM2_ARATH^RTM2_ARATH^Q:39-123,H:19-104^37.21%ID^E:6e-13^RecName: Full=Protein RESTRICTED TEV MOVEMENT 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00011.18^HSP20^Hsp20/alpha crystallin family^47-126^E:1.7e-11",".",".","COG0071^response to heat","KEGG:ath:AT5G04890","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0006952^biological_process^defense response`GO:0009615^biological_process^response to virus`GO:0046741^biological_process^transport of virus in host, tissue to tissue",".",".","."]
["TRINITY_DN38453_c0_g2","leaves S. yangii","roots S. yangii",-1.20909699128637,"0.00526299048130391","0.00708051941239428","TRINITY_DN38453_c0_g2_i1","SAMT_CLABR^SAMT_CLABR^Q:1265-180,H:1-356^39.62%ID^E:2e-87^RecName: Full=Salicylate carboxymethyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia",".","TRINITY_DN38453_c0_g2_i1.p1","174-1265[-]","SAMT_CLABR^SAMT_CLABR^Q:1-362,H:1-356^39.62%ID^E:5e-89^RecName: Full=Salicylate carboxymethyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Onagraceae; Onagroideae; Onagreae; Clarkia","PF03492.12^Methyltransf_7^SAM dependent carboxyl methyltransferase^39-362^E:8.7e-112",".",".",".",".","GO:0046872^molecular_function^metal ion binding`GO:0008168^molecular_function^methyltransferase activity","GO:0008168^molecular_function^methyltransferase activity",".","."]
["TRINITY_DN46359_c1_g3","leaves S. yangii","roots S. yangii",-1.21404961852381,"0.00158070688361791","0.00221147396316619","TRINITY_DN46359_c1_g3_i1","IQM2_ARATH^IQM2_ARATH^Q:656-3,H:1-203^61.19%ID^E:3e-74^RecName: Full=IQ domain-containing protein IQM2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46359_c1_g3_i1.p1","3-656[-]","IQM2_ARATH^IQM2_ARATH^Q:1-218,H:1-203^61.19%ID^E:5e-75^RecName: Full=IQ domain-containing protein IQM2 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00612.24^IQ^IQ calmodulin-binding motif^122-139^E:0.004",".",".","ENOG410XYNX^Calmodulin-binding","KEGG:ath:AT3G13600","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45435_c2_g2","leaves S. yangii","roots S. yangii",-1.21523756197377,"0.000124032337684177","0.000187467811763557","TRINITY_DN45435_c2_g2_i1","NAC25_ARATH^NAC25_ARATH^Q:958-395,H:5-191^75.13%ID^E:3e-83^RecName: Full=NAC transcription factor 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45435_c2_g2_i1.p1","89-964[-]","NAC25_ARATH^NAC25_ARATH^Q:3-190,H:5-191^75.13%ID^E:3e-96^RecName: Full=NAC transcription factor 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^16-142^E:5.3e-28",".",".","ENOG4111FG3^nac domain","KEGG:ath:AT1G61110","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47191_c3_g2","leaves S. yangii","roots S. yangii",-1.21900948628511,"0.000680209883739788","0.000978030665883678","TRINITY_DN47191_c3_g2_i10","CSLA1_CYATE^CSLA1_CYATE^Q:72-1205,H:1-352^67.72%ID^E:0^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis`CSLA1_CYATE^CSLA1_CYATE^Q:1279-1659,H:348-474^75.59%ID^E:0^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis`CSLA1_CYATE^CSLA1_CYATE^Q:1754-1918,H:472-526^67.27%ID^E:0^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis",".","TRINITY_DN47191_c3_g2_i10.p1","72-1004[+]","CSLA1_CYATE^CSLA1_CYATE^Q:1-306,H:1-305^72.88%ID^E:3e-163^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis","PF13641.3^Glyco_tranf_2_3^Glycosyltransferase like family 2^92-303^E:1.3e-18`PF00535.23^Glycos_transf_2^Glycosyl transferase family 2^97-244^E:4.7e-12`PF13632.3^Glyco_trans_2_3^Glycosyl transferase family group 2^186-301^E:3.7e-10",".",".",".",".","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0071555^biological_process^cell wall organization",".",".","."]
["TRINITY_DN40579_c0_g1","leaves S. yangii","roots S. yangii",-1.22238713793533,{"v":8738533973.98888,"d":"8.74E+09"},"0.000133265829248435","TRINITY_DN40579_c0_g1_i1","B561C_ARATH^B561C_ARATH^Q:247-756,H:23-195^48.57%ID^E:4e-39^RecName: Full=Cytochrome b561 and DOMON domain-containing protein At3g25290;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40579_c0_g1_i1.p1","172-936[+]","AIR12_ARATH^AIR12_ARATH^Q:12-254,H:10-252^44%ID^E:1e-50^RecName: Full=Auxin-induced in root cultures protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04526.10^DUF568^Protein of unknown function (DUF568)^93-193^E:1e-27","sigP:1^28^0.778^YES",".","ENOG410ZM7E^Protein of unknown function (DUF568)","KEGG:ath:AT3G07390","GO:0031225^cellular_component^anchored component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0046872^molecular_function^metal ion binding`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0055114^biological_process^oxidation-reduction process",".",".","."]
["TRINITY_DN44569_c2_g1","leaves S. yangii","roots S. yangii",-1.22431129586126,"0.00265427080159073","0.00365495638061569","TRINITY_DN44569_c2_g1_i2","MYB1_MAIZE^MYB1_MAIZE^Q:61-345,H:1-95^71.58%ID^E:2e-44^RecName: Full=Myb-related protein Zm1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN44569_c2_g1_i2.p1","1-351[+]","MYB1_MAIZE^MYB1_MAIZE^Q:21-115,H:1-95^71.58%ID^E:2e-45^RecName: Full=Myb-related protein Zm1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^36-83^E:5.6e-15`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^39-98^E:1.2e-11",".",".","COG5147^Myblike DNAbinding domain containing protein",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN43953_c2_g1","leaves S. yangii","roots S. yangii",-1.22915989214815,"0.000246981625261941","0.000366500169558519","TRINITY_DN43953_c2_g1_i1","HMGYA_MAIZE^HMGYA_MAIZE^Q:283-477,H:17-77^63.08%ID^E:4e-18^RecName: Full=HMG-Y-related protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN43953_c2_g1_i1.p1","190-822[+]","HMGYA_ARATH^HMGYA_ARATH^Q:25-210,H:21-204^46.19%ID^E:4e-45^RecName: Full=HMG-Y-related protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00538.16^Linker_histone^linker histone H1 and H5 family^28-92^E:2.3e-08`PF02178.16^AT_hook^AT hook motif^127-138^E:0.052`PF02178.16^AT_hook^AT hook motif^159-169^E:0.045`PF02178.16^AT_hook^AT hook motif^191-201^E:1.9",".",".","ENOG410YQM8^HMG-Y-related protein","KEGG:ath:AT1G14900","GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly`GO:0006355^biological_process^regulation of transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly`GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN45470_c0_g1","leaves S. yangii","roots S. yangii",-1.23584251619694,"0.0089947203656455","0.0118556461290042","TRINITY_DN45470_c0_g1_i7","LACS7_ARATH^LACS7_ARATH^Q:336-2462,H:5-691^66.85%ID^E:0^RecName: Full=Long chain acyl-CoA synthetase 7, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45470_c0_g1_i7.p1","330-2465[+]","LACS7_ARATH^LACS7_ARATH^Q:3-711,H:5-691^66.85%ID^E:0^RecName: Full=Long chain acyl-CoA synthetase 7, peroxisomal;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00501.25^AMP-binding^AMP-binding enzyme^110-551^E:5.9e-109",".",".","COG1022^Amp-dependent synthetase and ligase","KEGG:ath:AT5G27600`KO:K01897","GO:0005777^cellular_component^peroxisome`GO:0005524^molecular_function^ATP binding`GO:0004467^molecular_function^long-chain fatty acid-CoA ligase activity`GO:0006631^biological_process^fatty acid metabolic process`GO:0001676^biological_process^long-chain fatty acid metabolic process`GO:0010193^biological_process^response to ozone`GO:0009651^biological_process^response to salt stress","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45984_c0_g3","leaves S. yangii","roots S. yangii",-1.23725364490031,{"v":9077794261.41623,"d":"9.08E+09"},"0.000138280015043704","TRINITY_DN45984_c0_g3_i4","MYB44_ARATH^MYB44_ARATH^Q:276-533,H:6-105^60%ID^E:2e-30^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45984_c0_g3_i4.p1","159-1337[+]","MYB44_ARATH^MYB44_ARATH^Q:38-125,H:4-105^58.82%ID^E:2e-32^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^40-83^E:1.9e-14`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^43-83^E:1.1e-06`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^84-122^E:2.4e-13`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^84-125^E:3.3e-07",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT5G67300`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:2000022^biological_process^regulation of jasmonic acid mediated signaling pathway`GO:2000031^biological_process^regulation of salicylic acid mediated signaling pathway`GO:0009737^biological_process^response to abscisic acid`GO:0009733^biological_process^response to auxin`GO:0046686^biological_process^response to cadmium ion`GO:0010200^biological_process^response to chitin`GO:0009723^biological_process^response to ethylene`GO:0009739^biological_process^response to gibberellin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN23044_c0_g1","leaves S. yangii","roots S. yangii",-1.23788398245228,"0.000869344243546856","0.00124059269510133","TRINITY_DN23044_c0_g1_i1","HSP22_ARATH^HSP22_ARATH^Q:654-205,H:48-195^53.29%ID^E:3e-45^RecName: Full=22.0 kDa heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN23044_c0_g1_i1.p1","202-783[-]","HSP22_ARATH^HSP22_ARATH^Q:10-193,H:6-195^45.92%ID^E:1e-47^RecName: Full=22.0 kDa heat shock protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04969.13^CS^CS domain^69-117^E:0.023`PF00011.18^HSP20^Hsp20/alpha crystallin family^71-175^E:4.6e-28","sigP:1^26^0.864^YES",".","COG0071^response to heat","KEGG:ath:AT4G10250`KO:K13993","GO:0005783^cellular_component^endoplasmic reticulum`GO:0009408^biological_process^response to heat",".",".","."]
["TRINITY_DN38604_c0_g1","leaves S. yangii","roots S. yangii",-1.24011089485924,"0.0234819901781305","0.0297853942638545","TRINITY_DN38604_c0_g1_i1","HPR3_ARATH^HPR3_ARATH^Q:6-431,H:182-323^59.15%ID^E:8e-54^RecName: Full=Glyoxylate/hydroxypyruvate reductase HPR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38604_c0_g1_i1.p1","3-443[+]","HPR3_ARATH^HPR3_ARATH^Q:2-143,H:182-323^59.15%ID^E:1e-54^RecName: Full=Glyoxylate/hydroxypyruvate reductase HPR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02826.16^2-Hacid_dh_C^D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain^11-109^E:3.6e-32",".",".","COG1052^Dehydrogenase","KEGG:ath:AT1G12550`KO:K15919","GO:0030267^molecular_function^glyoxylate reductase (NADP) activity`GO:0016618^molecular_function^hydroxypyruvate reductase activity`GO:0051287^molecular_function^NAD binding`GO:0009854^biological_process^oxidative photosynthetic carbon pathway`GO:0009853^biological_process^photorespiration","GO:0051287^molecular_function^NAD binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN28646_c1_g1","leaves S. yangii","roots S. yangii",-1.24088908873808,"0.00953713027560977","0.0125389680111433","TRINITY_DN28646_c1_g1_i1","TAF8_ARATH^TAF8_ARATH^Q:1145-705,H:25-170^38.93%ID^E:1e-18^RecName: Full=Transcription initiation factor TFIID subunit 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28646_c1_g1_i1.p1","441-1379[-]","TAF8_ARATH^TAF8_ARATH^Q:79-227,H:25-172^38.41%ID^E:1e-19^RecName: Full=Transcription initiation factor TFIID subunit 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07524.10^Bromo_TP^Bromodomain associated^80-149^E:3.8e-18",".",".","ENOG410ZS4D^TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor","KEGG:ath:AT4G34340`KO:K14649","GO:0005634^cellular_component^nucleus`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47161_c2_g1","leaves S. yangii","roots S. yangii",-1.24790556118443,"0.00182088081863021","0.0025344883540956","TRINITY_DN47161_c2_g1_i1","SUVH4_ARATH^SUVH4_ARATH^Q:468-2159,H:102-624^60.6%ID^E:0^RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47161_c2_g1_i1.p1","168-2162[+]","SUVH4_ARATH^SUVH4_ARATH^Q:96-664,H:97-624^60.25%ID^E:0^RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02182.14^SAD_SRA^SAD/SRA domain^181-347^E:1.7e-47`PF05033.13^Pre-SET^Pre-SET motif^378-479^E:1.9e-17`PF00856.25^SET^SET domain^498-634^E:1.8e-16",".",".","COG2940^Histone-lysine N-methyltransferase`COG3440^ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase","KEGG:ath:AT5G13960`KO:K11420","GO:0000775^cellular_component^chromosome, centromeric region`GO:0005634^cellular_component^nucleus`GO:0010385^molecular_function^double-stranded methylated DNA binding`GO:0046974^molecular_function^histone methyltransferase activity (H3-K9 specific)`GO:0008327^molecular_function^methyl-CpG binding`GO:0010428^molecular_function^methyl-CpNpG binding`GO:0010429^molecular_function^methyl-CpNpN binding`GO:0008270^molecular_function^zinc ion binding`GO:0051567^biological_process^histone H3-K9 methylation`GO:0016571^biological_process^histone methylation`GO:0010216^biological_process^maintenance of DNA methylation`GO:0018022^biological_process^peptidyl-lysine methylation","GO:0042393^molecular_function^histone binding`GO:0008270^molecular_function^zinc ion binding`GO:0018024^molecular_function^histone-lysine N-methyltransferase activity`GO:0034968^biological_process^histone lysine methylation`GO:0005634^cellular_component^nucleus`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46412_c3_g8","leaves S. yangii","roots S. yangii",-1.25322758445595,"0.00592099500189343","0.00792835826312653","TRINITY_DN46412_c3_g8_i1","H4_SOYBN^H4_SOYBN^Q:418-185,H:22-99^100%ID^E:2e-47^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46412_c3_g8_i1.p1","170-481[-]","H4_SOYBN^H4_SOYBN^Q:1-103,H:1-103^100%ID^E:1e-65^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF15511.3^CENP-T_C^Centromere kinetochore component CENP-T histone fold^35-96^E:1.4e-08`PF02969.14^TAF^TATA box binding protein associated factor (TAF)^35-92^E:0.00016",".",".","COG2036^Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling","KEGG:gmx:100305586`KEGG:gmx:100777359`KEGG:gmx:100778317`KEGG:gmx:100784085`KEGG:gmx:100784197`KEGG:gmx:100793106`KEGG:gmx:100799680`KEGG:gmx:100800769`KEGG:gmx:100805597`KEGG:gmx:100818211`KEGG:gmx:100818748`KEGG:gmx:100819286`KO:K11254","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0009579^cellular_component^thylakoid`GO:0005774^cellular_component^vacuolar membrane`GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly","GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN46090_c2_g1","leaves S. yangii","roots S. yangii",-1.25656042383133,"0.00871603398672585","0.0114973765535281","TRINITY_DN46090_c2_g1_i2","NAC22_ARATH^NAC22_ARATH^Q:1019-642,H:68-197^58.09%ID^E:7e-41^RecName: Full=NAC domain-containing protein 21/22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46090_c2_g1_i2.p1","288-1040[-]","NAC22_ARATH^NAC22_ARATH^Q:8-133,H:68-197^58.09%ID^E:1e-42^RecName: Full=NAC domain-containing protein 21/22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^15-87^E:1.7e-15",".",".","ENOG410YDRK^NAC domain-containing protein 21","KEGG:ath:AT1G56010","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0048527^biological_process^lateral root development`GO:0010072^biological_process^primary shoot apical meristem specification`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47102_c3_g7","leaves S. yangii","roots S. yangii",-1.25725881005116,"0.00201158349423171","0.00279187586391102","TRINITY_DN47102_c3_g7_i1","R1A6_SOLDE^R1A6_SOLDE^Q:50-604,H:681-863^39.78%ID^E:2e-38^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47102_c3_g7_i1.p1","50-403[+]","R1A6_SOLDE^R1A6_SOLDE^Q:1-117,H:681-796^37.61%ID^E:3e-22^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^3-106^E:8.6e-20",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46017_c1_g1","leaves S. yangii","roots S. yangii",-1.25874605010276,"0.000626300481033521","0.000903468234294261","TRINITY_DN46017_c1_g1_i1","PLY_ZINVI^PLY_ZINVI^Q:1542-337,H:1-401^74.63%ID^E:0^RecName: Full=Pectate lyase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Zinnia",".","TRINITY_DN46017_c1_g1_i1.p1","334-1614[-]","PLY11_ARATH^PLY11_ARATH^Q:28-426,H:11-412^75.93%ID^E:0^RecName: Full=Putative pectate lyase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00544.16^Pec_lyase_C^Pectate lyase^157-342^E:9.8e-23`PF13229.3^Beta_helix^Right handed beta helix region^181-296^E:1.1e-07",".",".","COG3866^pectate lyase activity","KEGG:ath:AT3G27400`KO:K01728","GO:0046872^molecular_function^metal ion binding`GO:0030570^molecular_function^pectate lyase activity`GO:0045490^biological_process^pectin catabolic process",".",".","."]
["TRINITY_DN49037_c0_g1","leaves S. yangii","roots S. yangii",-1.25968513852754,"0.0137707985575289","0.0178720567099212","TRINITY_DN49037_c0_g1_i1","CAP1_ARATH^CAP1_ARATH^Q:1894-179,H:4-621^49.12%ID^E:4e-148^RecName: Full=Probable clathrin assembly protein At4g32285;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN49037_c0_g1_i1.p1","167-1906[-]","CAP1_ARATH^CAP1_ARATH^Q:5-576,H:4-621^49.28%ID^E:0^RecName: Full=Probable clathrin assembly protein At4g32285;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07651.13^ANTH^ANTH domain^31-325^E:1e-69",".",".","ENOG410XQ90^Clathrin assembly protein","KEGG:ath:AT4G32285","GO:0030136^cellular_component^clathrin-coated vesicle`GO:0005905^cellular_component^coated pit`GO:0005829^cellular_component^cytosol`GO:0005794^cellular_component^Golgi apparatus`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005545^molecular_function^1-phosphatidylinositol binding`GO:0048268^biological_process^clathrin coat assembly`GO:0006897^biological_process^endocytosis","GO:0005543^molecular_function^phospholipid binding",".","."]
["TRINITY_DN44724_c2_g1","leaves S. yangii","roots S. yangii",-1.26009859524129,"0.0392742896872599","0.0486225432386895","TRINITY_DN44724_c2_g1_i3","NAK_ARATH^NAK_ARATH^Q:2-385,H:226-353^60.94%ID^E:1e-47^RecName: Full=Probable serine/threonine-protein kinase NAK;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44724_c2_g1_i3.p1","2-388[+]","NAK_ARATH^NAK_ARATH^Q:1-128,H:226-353^60.94%ID^E:1e-48^RecName: Full=Probable serine/threonine-protein kinase NAK;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^12-122^E:4.7e-10`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^18-125^E:3.3e-09",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G02290","GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46038_c5_g3","leaves S. yangii","roots S. yangii",-1.26318473827068,"0.0185207048415525","0.0237589126771764","TRINITY_DN46038_c5_g3_i3","SHN3_ARATH^SHN3_ARATH^Q:510-923,H:28-178^51.32%ID^E:5e-36^RecName: Full=Ethylene-responsive transcription factor SHINE 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SHN3_ARATH^SHN3_ARATH^Q:325-405,H:1-27^92.59%ID^E:5e-36^RecName: Full=Ethylene-responsive transcription factor SHINE 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46038_c5_g3_i3.p1","366-980[+]","WIN1_ARATH^WIN1_ARATH^Q:49-187,H:28-199^49.42%ID^E:2e-42^RecName: Full=Ethylene-responsive transcription factor WIN1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^48-77^E:7.2e-06",".",".","ENOG4111RRZ^Transcription factor","KEGG:ath:AT1G15360","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010143^biological_process^cutin biosynthetic process`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated`GO:0010166^biological_process^wax metabolic process","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN41790_c0_g1","leaves S. yangii","roots S. yangii",-1.26612006618507,"0.00162377591178738","0.00226882023730395","TRINITY_DN41790_c0_g1_i3","TIO_ARATH^TIO_ARATH^Q:979-332,H:1101-1318^70.64%ID^E:2e-100^RecName: Full=Serine/threonine-protein kinase TIO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41790_c0_g1_i3.p1","323-868[-]","TIO_ARATH^TIO_ARATH^Q:1-179,H:1138-1318^74.03%ID^E:2e-87^RecName: Full=Serine/threonine-protein kinase TIO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13513.3^HEAT_EZ^HEAT-like repeat^31-84^E:1.3e-05`PF00514.20^Arm^Armadillo/beta-catenin-like repeat^57-86^E:0.00026",".",".","ENOG410XRQ6^Serine threonine kinase","KEGG:ath:AT1G50240`KO:K06228","GO:0005856^cellular_component^cytoskeleton`GO:0009524^cellular_component^phragmoplast`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0000911^biological_process^cytokinesis by cell plate formation`GO:0009558^biological_process^embryo sac cellularization","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44266_c4_g2","leaves S. yangii","roots S. yangii",-1.26952286820219,"0.00524652710188749","0.00705950587898603","TRINITY_DN44266_c4_g2_i1","BH025_ARATH^BH025_ARATH^Q:675-202,H:152-324^46.86%ID^E:2e-36^RecName: Full=Transcription factor bHLH25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44266_c4_g2_i1.p1","187-957[-]","BH025_ARATH^BH025_ARATH^Q:95-252,H:152-324^48%ID^E:2e-39^RecName: Full=Transcription factor bHLH25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^95-141^E:6.2e-12",".",".","ENOG410YG6S^Transcription factor","KEGG:ath:AT4G37850","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN38014_c0_g1","leaves S. yangii","roots S. yangii",-1.27146718988744,"0.00197257923753786","0.00273895366522353","TRINITY_DN38014_c0_g1_i1","Y1044_ARATH^Y1044_ARATH^Q:131-1990,H:1-660^65.96%ID^E:0^RecName: Full=BTB/POZ domain-containing protein At1g30440;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38014_c0_g1_i1.p1","131-1999[+]","Y1044_ARATH^Y1044_ARATH^Q:1-620,H:1-660^65.96%ID^E:0^RecName: Full=BTB/POZ domain-containing protein At1g30440;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00651.28^BTB^BTB/POZ domain^26-113^E:2.7e-08`PF03000.11^NPH3^NPH3 family^214-472^E:1.9e-87",".",".","ENOG410ZHWZ^BTB POZ domain-containing protein","KEGG:ath:AT1G30440","GO:0005886^cellular_component^plasma membrane`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46023_c3_g6","leaves S. yangii","roots S. yangii",-1.27355724319769,"0.000688029522922238","0.000988764181827663","TRINITY_DN46023_c3_g6_i1","WAKLH_ARATH^WAKLH_ARATH^Q:588-175,H:628-764^40.28%ID^E:1e-27^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46023_c3_g6_i1.p1","118-588[-]","WAKLH_ARATH^WAKLH_ARATH^Q:1-138,H:628-764^42.55%ID^E:2e-27^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^2-91^E:1.8e-08`PF00069.22^Pkinase^Protein kinase domain^2-87^E:7.8e-08",".",".",".","KEGG:ath:AT1G69730","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44681_c5_g4","leaves S. yangii","roots S. yangii",-1.28849618603714,"0.0003883532474002","0.000568452207451468","TRINITY_DN44681_c5_g4_i1","ZAT1_ARATH^ZAT1_ARATH^Q:163-720,H:7-259^36.76%ID^E:2e-29^RecName: Full=Zinc finger protein ZAT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44681_c5_g4_i1.p1","157-732[+]","ZAT1_ARATH^ZAT1_ARATH^Q:3-188,H:7-259^36.76%ID^E:5e-31^RecName: Full=Zinc finger protein ZAT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13912.3^zf-C2H2_6^C2H2-type zinc finger^3-25^E:2.9e-06`PF13894.3^zf-C2H2_4^C2H2-type zinc finger^3-23^E:0.0015`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^106-128^E:4.3e-07`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^144-167^E:8.3e-08",".",".","COG5048^Zinc finger protein","KEGG:ath:AT1G02030","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47106_c6_g1","leaves S. yangii","roots S. yangii",-1.31533347587765,"0.0165208863251288","0.0212936245295789","TRINITY_DN47106_c6_g1_i1","RP8L3_ARATH^RP8L3_ARATH^Q:1-150,H:458-507^50%ID^E:1e-08^RecName: Full=Disease resistance RPP8-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47106_c6_g1_i1.p1","1-345[+]","RP8L3_ARATH^RP8L3_ARATH^Q:1-50,H:458-507^50%ID^E:9e-09^RecName: Full=Disease resistance RPP8-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT5G35450","GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN45489_c2_g3","leaves S. yangii","roots S. yangii",-1.31978023780265,"0.00229539561883184","0.00317471746763317","TRINITY_DN45489_c2_g3_i2","P2C60_ARATH^P2C60_ARATH^Q:581-847,H:266-355^61.11%ID^E:6e-26^RecName: Full=Probable protein phosphatase 2C 60;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45489_c2_g3_i2.p1","527-865[+]","P2C60_ARATH^P2C60_ARATH^Q:19-107,H:266-355^61.11%ID^E:2e-28^RecName: Full=Probable protein phosphatase 2C 60;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00481.18^PP2C^Protein phosphatase 2C^22-64^E:0.00021",".",".","COG0631^Phosphatase","KEGG:ath:AT4G31860`KO:K17499","GO:0005886^cellular_component^plasma membrane`GO:0046872^molecular_function^metal ion binding`GO:0004722^molecular_function^protein serine/threonine phosphatase activity","GO:0003824^molecular_function^catalytic activity",".","."]
["TRINITY_DN46697_c0_g5","leaves S. yangii","roots S. yangii",-1.32151945711527,"0.000854237914200051","0.00121952071760421","TRINITY_DN46697_c0_g5_i1","Y1465_ARATH^Y1465_ARATH^Q:823-290,H:22-214^31.28%ID^E:2e-14^RecName: Full=Late embryogenesis abundant protein At1g64065 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46697_c0_g5_i1.p1","287-832[-]","Y1465_ARATH^Y1465_ARATH^Q:4-181,H:22-214^31.28%ID^E:2e-19^RecName: Full=Late embryogenesis abundant protein At1g64065 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03168.10^LEA_2^Late embryogenesis abundant protein^69-165^E:8e-13",".",".","ENOG4111AY7^Late embryogenesis abundant protein","KEGG:ath:AT1G64065","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN45103_c1_g3","leaves S. yangii","roots S. yangii",-1.32502343857437,"0.00947112063267114","0.0124559988984136","TRINITY_DN45103_c1_g3_i1","STIL4_ARATH^STIL4_ARATH^Q:2583-1570,H:240-576^57.1%ID^E:0^RecName: Full=Protein STICHEL-like 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`STIL4_ARATH^STIL4_ARATH^Q:1498-407,H:576-960^51.63%ID^E:0^RecName: Full=Protein STICHEL-like 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45103_c1_g3_i1.p1","1534-2880[-]","STIL3_ARATH^STIL3_ARATH^Q:52-439,H:247-669^52.55%ID^E:6e-131^RecName: Full=Protein STICHEL-like 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13177.3^DNA_pol3_delta2^DNA polymerase III, delta subunit^217-375^E:1.2e-24`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^239-370^E:2.8e-08",".",".","COG2812^dna polymerase iii subunits gamma and tau","KEGG:ath:AT4G18820","GO:0009360^cellular_component^DNA polymerase III complex`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0003887^molecular_function^DNA-directed DNA polymerase activity`GO:0006260^biological_process^DNA replication","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN32931_c0_g1","leaves S. yangii","roots S. yangii",-1.33036199373864,"0.000565078879181995","0.000817832730793042","TRINITY_DN32931_c0_g1_i1","Y3804_ARATH^Y3804_ARATH^Q:1093-533,H:216-400^34.39%ID^E:2e-14^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3804_ARATH^Y3804_ARATH^Q:1075-521,H:411-596^34.04%ID^E:1e-07^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32931_c0_g1_i1.p1","254-1582[-]","IMK2_ARATH^IMK2_ARATH^Q:144-351,H:182-394^34.27%ID^E:1e-21^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase IMK2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IMK2_ARATH^IMK2_ARATH^Q:194-333,H:114-256^39.16%ID^E:8e-15^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase IMK2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IMK2_ARATH^IMK2_ARATH^Q:225-333,H:99-207^41.28%ID^E:5e-12^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase IMK2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IMK2_ARATH^IMK2_ARATH^Q:245-333,H:95-183^35.96%ID^E:1e-06^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase IMK2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^220-280^E:1.2e-07`PF13855.3^LRR_8^Leucine rich repeat^269-327^E:3.6e-09`PF12799.4^LRR_4^Leucine Rich repeats (2 copies)^292-326^E:1.3e-06`PF00560.30^LRR_1^Leucine Rich Repeat^294-312^E:0.18`PF13516.3^LRR_6^Leucine Rich repeat^294-306^E:0.54","sigP:1^30^0.753^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G51740","GO:0005618^cellular_component^cell wall`GO:0016021^cellular_component^integral component of membrane`GO:0009505^cellular_component^plant-type cell wall`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47246_c0_g2","leaves S. yangii","roots S. yangii",-1.33615705007461,"0.00227190939813221","0.00314379346358215","TRINITY_DN47246_c0_g2_i1","POLX_TOBAC^POLX_TOBAC^Q:52-354,H:520-621^44.12%ID^E:1e-28^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:354-605,H:622-706^32.94%ID^E:1e-28^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:1098-1301,H:895-964^55.71%ID^E:9e-26^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:842-1105,H:809-896^37.5%ID^E:9e-26^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47246_c0_g2_i1.p2","803-1129[+]","M820_ARATH^M820_ARATH^Q:8-101,H:30-110^36.17%ID^E:1e-14^RecName: Full=Uncharacterized mitochondrial protein AtMg00820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07727.11^RVT_2^Reverse transcriptase (RNA-dependent DNA polymerase)^45-103^E:1.1e-16",".",".","COG2801^Retrotransposon protein","KEGG:ath:ArthMp071","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN44593_c5_g1","leaves S. yangii","roots S. yangii",-1.33794654217821,"0.0084275971073501","0.0111285965275484","TRINITY_DN44593_c5_g1_i4","KPSS1_ORYSJ^KPSS1_ORYSJ^Q:1087-653,H:1-145^51.03%ID^E:6e-47^RecName: Full=Kinesin-1-like protein PSS1 {ECO:0000303|PubMed:21282525, ECO:0000312|EMBL:DAA34941.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44593_c5_g1_i4.p1","608-1087[-]","KPSS1_ORYSJ^KPSS1_ORYSJ^Q:1-145,H:1-145^51.03%ID^E:1e-50^RecName: Full=Kinesin-1-like protein PSS1 {ECO:0000303|PubMed:21282525, ECO:0000312|EMBL:DAA34941.1};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF16796.2^Microtub_bd^Microtubule binding^3-141^E:2.7e-19`PF00225.20^Kinesin^Kinesin motor domain^10-143^E:1.2e-26",".",".","COG5059^Kinesin family member","KEGG:osa:4344521","GO:0005737^cellular_component^cytoplasm`GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0003777^molecular_function^microtubule motor activity`GO:0006261^biological_process^DNA-dependent DNA replication`GO:0007018^biological_process^microtubule-based movement","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN44549_c1_g2","leaves S. yangii","roots S. yangii",-1.34081848536678,"0.00118640490195916","0.00167457915745597","TRINITY_DN44549_c1_g2_i2","PTR9_ARATH^PTR9_ARATH^Q:1842-214,H:21-555^62.32%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 5.10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44549_c1_g2_i2.p1","211-1926[-]","PTR9_ARATH^PTR9_ARATH^Q:28-571,H:20-555^62.39%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 5.10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^57-511^E:2.4e-10`PF00854.18^PTR2^POT family^110-524^E:8.1e-87",".",".","COG3104^transporter","KEGG:ath:AT1G22540","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006857^biological_process^oligopeptide transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN39068_c0_g1","leaves S. yangii","roots S. yangii",-1.3431342476073,"0.00795958655074432","0.0105338703832452","TRINITY_DN39068_c0_g1_i2","ALIS1_ARATH^ALIS1_ARATH^Q:245-1213,H:23-345^64.31%ID^E:1e-148^RecName: Full=ALA-interacting subunit 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39068_c0_g1_i2.p1","215-1231[+]","ALIS1_ARATH^ALIS1_ARATH^Q:11-333,H:23-345^64.31%ID^E:1e-156^RecName: Full=ALA-interacting subunit 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03381.12^CDC50^LEM3 (ligand-effect modulator 3) family / CDC50 family^58-321^E:1.4e-85",".",".","COG5035^Cell cycle control protein","KEGG:ath:AT3G12740","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0031902^cellular_component^late endosome membrane`GO:0015914^biological_process^phospholipid transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44413_c0_g2","leaves S. yangii","roots S. yangii",-1.35768948820445,"0.00750243099231692","0.0099551106743079","TRINITY_DN44413_c0_g2_i1","PMTA_ARATH^PMTA_ARATH^Q:1593-220,H:187-653^59.83%ID^E:0^RecName: Full=Probable methyltransferase PMT10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44413_c0_g2_i1.p1","211-1641[-]","PMTA_ARATH^PMTA_ARATH^Q:17-474,H:187-653^59.83%ID^E:0^RecName: Full=Probable methyltransferase PMT10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03141.13^Methyltransf_29^Putative S-adenosyl-L-methionine-dependent methyltransferase^16-474^E:2.6e-172`PF08241.9^Methyltransf_11^Methyltransferase domain^96-186^E:0.00032",".",".","ENOG410ZKVC^Methyltransferase","KEGG:ath:AT1G77260","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0008168^molecular_function^methyltransferase activity","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47102_c3_g1","leaves S. yangii","roots S. yangii",-1.36901788759631,"0.000156568575900495","0.000235241871567911","TRINITY_DN47102_c3_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:334-1353,H:524-859^42.11%ID^E:4e-58^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47102_c3_g1_i1.p1","1-1353[+]","R1A6_SOLDE^R1A6_SOLDE^Q:47-451,H:457-859^38.98%ID^E:2e-77^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^120-398^E:1.3e-70",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45209_c0_g1","leaves S. yangii","roots S. yangii",-1.38319314033131,"0.00230194967999493","0.00318325596038972","TRINITY_DN45209_c0_g1_i8","HA22F_ARATH^HA22F_ARATH^Q:121-588,H:1-158^65.82%ID^E:4e-75^RecName: Full=HVA22-like protein f;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45209_c0_g1_i8.p1","121-591[+]","HA22F_ARATH^HA22F_ARATH^Q:1-156,H:1-158^65.82%ID^E:6e-77^RecName: Full=HVA22-like protein f;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03134.16^TB2_DP1_HVA22^TB2/DP1, HVA22 family^24-100^E:2.6e-26",".",".","COG5052^receptor accessory protein","KEGG:ath:AT2G42820","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN47226_c0_g1","leaves S. yangii","roots S. yangii",-1.38977447713392,"0.000970167169270559","0.00137913873796386","TRINITY_DN47226_c0_g1_i1","AUR1_ARATH^AUR1_ARATH^Q:487-200,H:198-293^88.54%ID^E:1e-56^RecName: Full=Serine/threonine-protein kinase Aurora-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47226_c0_g1_i1.p1","194-499[-]","AUR1_ARATH^AUR1_ARATH^Q:5-100,H:198-293^88.54%ID^E:1e-58^RecName: Full=Serine/threonine-protein kinase Aurora-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^6-89^E:3.7e-17`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^8-85^E:3.3e-06",".",".","ENOG410XNRB^serine threonine-protein kinase","KEGG:ath:AT4G32830`KO:K08850","GO:0009504^cellular_component^cell plate`GO:0032133^cellular_component^chromosome passenger complex`GO:0000780^cellular_component^condensed nuclear chromosome, centromeric region`GO:0005874^cellular_component^microtubule`GO:0031965^cellular_component^nuclear membrane`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0009524^cellular_component^phragmoplast`GO:0005819^cellular_component^spindle`GO:0005876^cellular_component^spindle microtubule`GO:0051233^cellular_component^spindle midzone`GO:0000922^cellular_component^spindle pole`GO:0005524^molecular_function^ATP binding`GO:0035175^molecular_function^histone kinase activity (H3-S10 specific)`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0051301^biological_process^cell division`GO:0043987^biological_process^histone H3-S10 phosphorylation`GO:0016572^biological_process^histone phosphorylation`GO:0007067^biological_process^mitotic nuclear division`GO:0007052^biological_process^mitotic spindle organization`GO:0032465^biological_process^regulation of cytokinesis","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN35727_c0_g1","leaves S. yangii","roots S. yangii",-1.39329642783603,"0.0114079215979266","0.0149010149597442","TRINITY_DN35727_c0_g1_i3","GSTX6_SOYBN^GSTX6_SOYBN^Q:913-641,H:124-213^41.76%ID^E:1e-15^RecName: Full=Probable glutathione S-transferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN35727_c0_g1_i3.p1","443-1015[-]","GSTX6_SOYBN^GSTX6_SOYBN^Q:35-125,H:124-213^41.76%ID^E:3e-16^RecName: Full=Probable glutathione S-transferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00043.22^GST_C^Glutathione S-transferase, C-terminal domain^39-106^E:2.9e-05",".",".","ENOG410XSIX^glutathione Stransferase","KEGG:gmx:100527851`KO:K00799","GO:0005737^cellular_component^cytoplasm`GO:0004364^molecular_function^glutathione transferase activity`GO:0006749^biological_process^glutathione metabolic process`GO:0009407^biological_process^toxin catabolic process",".",".","."]
["TRINITY_DN37508_c0_g1","leaves S. yangii","roots S. yangii",-1.43030869573162,"0.00640265994022076","0.00854868875610663","TRINITY_DN37508_c0_g1_i1","XERIC_ARATH^XERIC_ARATH^Q:550-365,H:98-156^40.32%ID^E:6e-11^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37508_c0_g1_i1.p1","299-736[-]","XERIC_ARATH^XERIC_ARATH^Q:63-124,H:98-156^40.32%ID^E:8e-12^RecName: Full=Probable E3 ubiquitin-protein ligase XERICO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^67-110^E:1.1e-12`PF17123.2^zf-RING_11^RING-like zinc finger^67-95^E:3.8e-07`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^67-109^E:1.2e-06`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^68-109^E:1e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^68-107^E:5.9e-05",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT2G04240`KO:K16285","GO:0016021^cellular_component^integral component of membrane`GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009688^biological_process^abscisic acid biosynthetic process`GO:0009687^biological_process^abscisic acid metabolic process`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin`GO:0009739^biological_process^response to gibberellin`GO:0006970^biological_process^response to osmotic stress`GO:0009651^biological_process^response to salt stress","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN91127_c0_g1","leaves S. yangii","roots S. yangii",-1.43529433887501,"0.000678294927744705","0.000975500831328431","TRINITY_DN91127_c0_g1_i1","Y1816_ARATH^Y1816_ARATH^Q:346-825,H:63-221^28.83%ID^E:6e-11^RecName: Full=Uncharacterized protein At1g08160;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN91127_c0_g1_i1.p1","211-834[+]","Y1816_ARATH^Y1816_ARATH^Q:40-205,H:57-221^28.99%ID^E:3e-22^RecName: Full=Uncharacterized protein At1g08160;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03168.10^LEA_2^Late embryogenesis abundant protein^83-176^E:2e-13",".",".","ENOG410YPRU^harpin-induced protein-related HIN1-related harpin-responsive protein-related","KEGG:ath:AT1G08160","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN28287_c0_g1","leaves S. yangii","roots S. yangii",-1.43612426029639,"0.000131257333420701","0.000198065903404841","TRINITY_DN28287_c0_g1_i1","HMGB7_ARATH^HMGB7_ARATH^Q:28-390,H:12-179^29.76%ID^E:1e-11^RecName: Full=High mobility group B protein 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28287_c0_g1_i1.p1","7-540[+]","HMGB7_ARATH^HMGB7_ARATH^Q:8-128,H:12-179^29.76%ID^E:1e-12^RecName: Full=High mobility group B protein 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF09011.7^HMG_box_2^HMG-box domain^69-120^E:3e-06",".",".","COG5648^high mobility group",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0000741^biological_process^karyogamy`GO:0010197^biological_process^polar nucleus fusion`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN27899_c0_g1","leaves S. yangii","roots S. yangii",-1.44470820104003,"0.00486606923838234","0.00656729624127149","TRINITY_DN27899_c0_g1_i2","MCM7_ORYSI^MCM7_ORYSI^Q:122-2278,H:5-725^84.33%ID^E:0^RecName: Full=DNA replication licensing factor MCM7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN27899_c0_g1_i2.p1","2-2281[+]","MCM7_ORYSI^MCM7_ORYSI^Q:41-759,H:5-725^84.33%ID^E:0^RecName: Full=DNA replication licensing factor MCM7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF14551.3^MCM_N^MCM N-terminal domain^54-200^E:1.7e-21`PF00493.20^MCM^MCM2/3/5 family^355-677^E:1.7e-131`PF01078.18^Mg_chelatase^Magnesium chelatase, subunit ChlI^466-528^E:5.4e-05",".",".","COG1241^dna replication licensing factor",".","GO:0005737^cellular_component^cytoplasm`GO:0042555^cellular_component^MCM complex`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0003678^molecular_function^DNA helicase activity`GO:0007049^biological_process^cell cycle`GO:0008283^biological_process^cell proliferation`GO:0006342^biological_process^chromatin silencing`GO:0006306^biological_process^DNA methylation`GO:0006270^biological_process^DNA replication initiation`GO:0006268^biological_process^DNA unwinding involved in DNA replication`GO:0051567^biological_process^histone H3-K9 methylation`GO:0010182^biological_process^sugar mediated signaling pathway","GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0006260^biological_process^DNA replication",".","."]
["TRINITY_DN45514_c1_g1","leaves S. yangii","roots S. yangii",-1.46137185967008,"0.000102565118448536","0.000155649405126956","TRINITY_DN45514_c1_g1_i5","R1B17_SOLDE^R1B17_SOLDE^Q:576-1,H:539-747^34.27%ID^E:8e-23^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45514_c1_g1_i5.p1","1-852[-]","R1B17_SOLDE^R1B17_SOLDE^Q:93-284,H:539-747^34.27%ID^E:7e-23^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^102-284^E:1.8e-32",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46823_c1_g1","leaves S. yangii","roots S. yangii",-1.47002401144973,"0.0166730596164192","0.0214787282035653","TRINITY_DN46823_c1_g1_i2","ASPL2_ARATH^ASPL2_ARATH^Q:312-1,H:123-224^45.19%ID^E:4e-22^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46823_c1_g1_i2.p1","1-312[-]","ASPL2_ARATH^ASPL2_ARATH^Q:1-104,H:123-224^45.19%ID^E:4e-22^RecName: Full=Aspartic proteinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^2-104^E:4.3e-17",".",".","ENOG410XNV7^aspartic","KEGG:ath:AT1G65240","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0004190^molecular_function^aspartic-type endopeptidase activity",".",".","."]
["TRINITY_DN45037_c7_g1","leaves S. yangii","roots S. yangii",-1.48209608420131,"0.000499210616875012","0.000725136866417508","TRINITY_DN45037_c7_g1_i2","TLPH_ARATH^TLPH_ARATH^Q:997-341,H:20-243^52.44%ID^E:2e-60^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45037_c7_g1_i2.p1","215-1078[-]","TLPH_ARATH^TLPH_ARATH^Q:28-246,H:20-243^53.33%ID^E:8e-76^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00314.14^Thaumatin^Thaumatin family^35-241^E:5.9e-78","sigP:1^27^0.777^YES",".","ENOG4111KEV^thaumatin-like protein",".",".",".",".","."]
["TRINITY_DN40041_c0_g1","leaves S. yangii","roots S. yangii",-1.49914969151474,"0.00141772746653393","0.00198978180751275","TRINITY_DN40041_c0_g1_i2","GGLO3_ARATH^GGLO3_ARATH^Q:222-1925,H:9-582^61.04%ID^E:0^RecName: Full=L-gulonolactone oxidase 3 {ECO:0000303|PubMed:20622436};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40041_c0_g1_i2.p1","171-1931[+]","GGLO3_ARATH^GGLO3_ARATH^Q:18-585,H:9-582^61.04%ID^E:0^RecName: Full=L-gulonolactone oxidase 3 {ECO:0000303|PubMed:20622436};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01565.20^FAD_binding_4^FAD binding domain^65-192^E:1.8e-18`PF04030.11^ALO^D-arabinono-1,4-lactone oxidase^433-531^E:8.4e-12","sigP:1^32^0.54^YES",".","COG0277^FAD linked oxidase domain protein","KEGG:ath:AT5G11540","GO:0016020^cellular_component^membrane`GO:0005773^cellular_component^vacuole`GO:0003885^molecular_function^D-arabinono-1,4-lactone oxidase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0050105^molecular_function^L-gulonolactone oxidase activity`GO:0019853^biological_process^L-ascorbic acid biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process`GO:0003885^molecular_function^D-arabinono-1,4-lactone oxidase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN36604_c0_g1","leaves S. yangii","roots S. yangii",-1.50374706882727,"0.00182271359141772","0.00253689869060059","TRINITY_DN36604_c0_g1_i1","DRL26_ARATH^DRL26_ARATH^Q:481-1152,H:91-366^30.32%ID^E:2e-14^RecName: Full=Probable disease resistance protein At4g19060;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36604_c0_g1_i1.p1","70-1206[+]","DRL26_ARATH^DRL26_ARATH^Q:138-361,H:91-366^30.69%ID^E:1e-21^RecName: Full=Probable disease resistance protein At4g19060;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^147-361^E:1.2e-28",".",".","ENOG410YKJE^disease resistance","KEGG:ath:AT4G19060","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN103310_c0_g1","leaves S. yangii","roots S. yangii",-1.50853647076789,"0.000828416790120792","0.00118427500796761","TRINITY_DN103310_c0_g1_i1","ATL16_ARATH^ATL16_ARATH^Q:1452-598,H:29-329^53.67%ID^E:2e-88^RecName: Full=RING-H2 finger protein ATL16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN103310_c0_g1_i1.p1","475-1518[-]","ATL16_ARATH^ATL16_ARATH^Q:23-307,H:29-329^54.63%ID^E:2e-99^RecName: Full=RING-H2 finger protein ATL16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^121-164^E:2.8e-12`PF17123.2^zf-RING_11^RING-like zinc finger^121-150^E:2.6e-11`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^121-163^E:2.4e-09`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^122-163^E:2.2e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^122-161^E:1.8e-05`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^133-164^E:2.3e-08",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT5G43420","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47265_c2_g1","leaves S. yangii","roots S. yangii",-1.51079747635312,"0.000213937292777636","0.000318765677109039","TRINITY_DN47265_c2_g1_i20","PGLR5_ARATH^PGLR5_ARATH^Q:640-5,H:112-326^56.28%ID^E:9e-83^RecName: Full=Probable polygalacturonase At1g80170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PGLR5_ARATH^PGLR5_ARATH^Q:765-610,H:64-115^44.23%ID^E:1e-08^RecName: Full=Probable polygalacturonase At1g80170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47265_c2_g1_i20.p1","2-382[-]","PGLR5_ARATH^PGLR5_ARATH^Q:1-126,H:201-326^55.56%ID^E:6e-41^RecName: Full=Probable polygalacturonase At1g80170;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00295.14^Glyco_hydro_28^Glycosyl hydrolases family 28^1-125^E:1.3e-41",".",".","COG5434^Glycoside hydrolase family 28","KEGG:ath:AT1G80170","GO:0005576^cellular_component^extracellular region`GO:0009505^cellular_component^plant-type cell wall`GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization","GO:0004650^molecular_function^polygalacturonase activity`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN46412_c3_g2","leaves S. yangii","roots S. yangii",-1.52204012903185,"0.000205350568917318","0.000306444542876197","TRINITY_DN46412_c3_g2_i2","H4_SOYBN^H4_SOYBN^Q:435-190,H:22-103^100%ID^E:2e-48^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46412_c3_g2_i2.p1","187-498[-]","H4_SOYBN^H4_SOYBN^Q:1-103,H:1-103^100%ID^E:1e-65^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF15511.3^CENP-T_C^Centromere kinetochore component CENP-T histone fold^35-96^E:1.4e-08`PF02969.14^TAF^TATA box binding protein associated factor (TAF)^35-92^E:0.00016",".",".","COG2036^Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling","KEGG:gmx:100305586`KEGG:gmx:100777359`KEGG:gmx:100778317`KEGG:gmx:100784085`KEGG:gmx:100784197`KEGG:gmx:100793106`KEGG:gmx:100799680`KEGG:gmx:100800769`KEGG:gmx:100805597`KEGG:gmx:100818211`KEGG:gmx:100818748`KEGG:gmx:100819286`KO:K11254","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0009579^cellular_component^thylakoid`GO:0005774^cellular_component^vacuolar membrane`GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly","GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN41303_c0_g1","leaves S. yangii","roots S. yangii",-1.52628388544154,"0.00104129587074664","0.0014767383121755","TRINITY_DN41303_c0_g1_i2","SINA2_ARATH^SINA2_ARATH^Q:1138-242,H:1-306^74.84%ID^E:3e-168^RecName: Full=E3 ubiquitin-protein ligase SINAT2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41303_c0_g1_i2.p1","236-1138[-]","SINA2_ARATH^SINA2_ARATH^Q:1-299,H:1-306^74.84%ID^E:3e-171^RecName: Full=E3 ubiquitin-protein ligase SINAT2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03145.13^Sina^Seven in absentia protein family^95-294^E:7.3e-73",".",".","ENOG410XVP0^e3 ubiquitin-protein ligase","KEGG:ath:AT3G58040`KO:K04506","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0016874^molecular_function^ligase activity`GO:0061630^molecular_function^ubiquitin protein ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0007275^biological_process^multicellular organism development`GO:0043161^biological_process^proteasome-mediated ubiquitin-dependent protein catabolic process`GO:0042787^biological_process^protein ubiquitination involved in ubiquitin-dependent protein catabolic process","GO:0006511^biological_process^ubiquitin-dependent protein catabolic process`GO:0007275^biological_process^multicellular organism development`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN46972_c4_g8","leaves S. yangii","roots S. yangii",-1.52764370322686,"0.0121564612104669","0.0158465899926178","TRINITY_DN46972_c4_g8_i1","MY108_ARATH^MY108_ARATH^Q:3-164,H:99-152^64.81%ID^E:2e-17^RecName: Full=Transcription factor MYB108;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46972_c4_g8_i1.p1","3-533[+]","MY108_ARATH^MY108_ARATH^Q:1-54,H:99-152^64.81%ID^E:4e-18^RecName: Full=Transcription factor MYB108;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT3G06490`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006952^biological_process^defense response`GO:0009737^biological_process^response to abscisic acid`GO:0009723^biological_process^response to ethylene`GO:0009620^biological_process^response to fungus`GO:0009753^biological_process^response to jasmonic acid`GO:0009651^biological_process^response to salt stress`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47194_c4_g1","leaves S. yangii","roots S. yangii",-1.53055277238588,{"v":8248927181.17579,"d":"8.25E+09"},"0.000126051925067763","TRINITY_DN47194_c4_g1_i1","FK119_ARATH^FK119_ARATH^Q:783-1,H:41-305^39.63%ID^E:1e-33^RecName: Full=F-box/kelch-repeat protein At5g43190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47194_c4_g1_i1.p1","1-777[-]","FK119_ARATH^FK119_ARATH^Q:1-259,H:43-305^42.59%ID^E:1e-45^RecName: Full=F-box/kelch-repeat protein At5g43190;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^5-46^E:3e-09`PF12937.4^F-box-like^F-box-like^6-43^E:1.3e-06",".",".","ENOG4111CQF^F-box kelch-repeat protein","KEGG:ath:AT5G43190",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN33523_c0_g2","leaves S. yangii","roots S. yangii",-1.53831722068994,"0.000633582882211935","0.000913448383523337","TRINITY_DN33523_c0_g2_i1","ALDO2_ARATH^ALDO2_ARATH^Q:27-1301,H:609-1010^50.82%ID^E:2e-129^RecName: Full=Indole-3-acetaldehyde oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALDO2_ARATH^ALDO2_ARATH^Q:425-610,H:738-799^66.13%ID^E:3e-20^RecName: Full=Indole-3-acetaldehyde oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN33523_c0_g2_i1.p1","3-569[+]","ALDO1_ARATH^ALDO1_ARATH^Q:9-178,H:652-817^42.94%ID^E:2e-37^RecName: Full=Indole-3-acetaldehyde oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01315.19^Ald_Xan_dh_C^Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain^7-76^E:1.6e-15",".",".","COG4630^xanthine dehydrogenase`COG4631^xanthine dehydrogenase","KEGG:ath:AT5G20960`KO:K11817","GO:0005829^cellular_component^cytosol`GO:0051537^molecular_function^2 iron, 2 sulfur cluster binding`GO:0004031^molecular_function^aldehyde oxidase activity`GO:0009055^molecular_function^electron carrier activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0050302^molecular_function^indole-3-acetaldehyde oxidase activity`GO:0005506^molecular_function^iron ion binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors`GO:0004854^molecular_function^xanthine dehydrogenase activity`GO:0009688^biological_process^abscisic acid biosynthetic process`GO:0009851^biological_process^auxin biosynthetic process`GO:0009115^biological_process^xanthine catabolic process",".",".","."]
["TRINITY_DN39006_c0_g1","leaves S. yangii","roots S. yangii",-1.54493994430312,"0.00568382766574899","0.00762135814808915","TRINITY_DN39006_c0_g1_i1","C94B3_ARATH^C94B3_ARATH^Q:243-1574,H:34-489^64.91%ID^E:0^RecName: Full=Cytochrome P450 94B3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39006_c0_g1_i1.p1","132-1619[+]","C94B3_ARATH^C94B3_ARATH^Q:2-495,H:4-503^62.03%ID^E:0^RecName: Full=Cytochrome P450 94B3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^70-468^E:2.2e-63","sigP:1^21^0.763^YES",".","COG2124^Cytochrome p450","KEGG:ath:AT3G48520","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0052694^molecular_function^jasmonoyl-isoleucine-12-hydroxylase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0048653^biological_process^anther development`GO:0002213^biological_process^defense response to insect`GO:0010154^biological_process^fruit development`GO:0009694^biological_process^jasmonic acid metabolic process`GO:0009555^biological_process^pollen development`GO:0009611^biological_process^response to wounding`GO:0048480^biological_process^stigma development","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN40034_c0_g1","leaves S. yangii","roots S. yangii",-1.55137528109364,"0.000794984085017977","0.0011377121691156","TRINITY_DN40034_c0_g1_i2","HMG13_ARATH^HMG13_ARATH^Q:575-57,H:98-274^67.23%ID^E:3e-56^RecName: Full=High mobility group B protein 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40034_c0_g1_i2.p1","51-1019[-]","HMGB6_ARATH^HMGB6_ARATH^Q:84-321,H:41-283^66.67%ID^E:5e-95^RecName: Full=High mobility group B protein 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00505.16^HMG_box^HMG (high mobility group) box^177-238^E:2.2e-14`PF09011.7^HMG_box_2^HMG-box domain^177-236^E:1.5e-08",".",".","COG5648^high mobility group",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN46443_c2_g3","leaves S. yangii","roots S. yangii",-1.55605660174804,"0.00491013497684629","0.00662427413068134","TRINITY_DN46443_c2_g3_i1","5MAT2_SALSN^5MAT2_SALSN^Q:1526-288,H:2-412^42.31%ID^E:2e-99^RecName: Full=Pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN46443_c2_g3_i1.p1","267-1565[-]","5MAT2_SALSN^5MAT2_SALSN^Q:14-426,H:2-412^42.31%ID^E:6e-105^RecName: Full=Pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF02458.12^Transferase^Transferase family^15-425^E:1.3e-64",".",".",".","KEGG:ag:AAR26385`KO:K12935","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0009718^biological_process^anthocyanin-containing compound biosynthetic process`GO:0043473^biological_process^pigmentation","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN38107_c0_g1","leaves S. yangii","roots S. yangii",-1.5578266966913,"0.000563540747575774","0.000815700692188351","TRINITY_DN38107_c0_g1_i1","SRO2_ARATH^SRO2_ARATH^Q:320-1000,H:54-286^46.35%ID^E:2e-64^RecName: Full=Probable inactive poly [ADP-ribose] polymerase SRO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38107_c0_g1_i1.p1","173-1021[+]","SRO2_ARATH^SRO2_ARATH^Q:41-276,H:45-286^44.63%ID^E:2e-65^RecName: Full=Probable inactive poly [ADP-ribose] polymerase SRO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00644.17^PARP^Poly(ADP-ribose) polymerase catalytic domain^102-184^E:2.4e-06`PF02493.17^MORN^MORN repeat^131-148^E:0.065`PF12174.5^RST^RCD1-SRO-TAF4 (RST) plant domain^242-276^E:1.4e-07",".",".","ENOG4111NY1^inactive poly ADP-ribose polymerase","KEGG:ath:AT1G23550","GO:0005634^cellular_component^nucleus`GO:0003950^molecular_function^NAD+ ADP-ribosyltransferase activity`GO:0007275^biological_process^multicellular organism development","GO:0003950^molecular_function^NAD+ ADP-ribosyltransferase activity",".","."]
["TRINITY_DN44579_c6_g2","leaves S. yangii","roots S. yangii",-1.55983229467368,"0.00121180296673688","0.00170898607773132","TRINITY_DN44579_c6_g2_i5","PHT17_ARATH^PHT17_ARATH^Q:1-1164,H:135-518^77.06%ID^E:0^RecName: Full=Probable inorganic phosphate transporter 1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44579_c6_g2_i5.p1","1-1218[+]","PHT13_ARATH^PHT13_ARATH^Q:1-387,H:135-520^77.78%ID^E:0^RecName: Full=Probable inorganic phosphate transporter 1-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^3-381^E:1.1e-33`PF07690.13^MFS_1^Major Facilitator Superfamily^3-323^E:1.8e-08",".",".","ENOG410ZVN7^phosphate transporter","KEGG:ath:AT5G43360`KO:K08176","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0022891^molecular_function^substrate-specific transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0006817^biological_process^phosphate ion transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47454_c2_g1","leaves S. yangii","roots S. yangii",-1.56812295028323,"0.000660675274785139","0.000951141962827435","TRINITY_DN47454_c2_g1_i2","HIPL1_ARATH^HIPL1_ARATH^Q:2207-312,H:20-647^68.4%ID^E:0^RecName: Full=HIPL1 protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47454_c2_g1_i2.p1","174-2270[-]","HIPL1_ARATH^HIPL1_ARATH^Q:22-661,H:20-655^68.01%ID^E:0^RecName: Full=HIPL1 protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07995.8^GSDH^Glucose / Sorbosone dehydrogenase^224-573^E:5.2e-23","sigP:1^25^0.909^YES",".","COG2133^Dehydrogenase","KEGG:ath:AT1G74790","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0016901^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor`GO:0048038^molecular_function^quinone binding`GO:0005975^biological_process^carbohydrate metabolic process","GO:0016901^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor`GO:0048038^molecular_function^quinone binding`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN43444_c3_g6","leaves S. yangii","roots S. yangii",-1.57081148893873,{"v":9913542742.36637,"d":"9.91E+09"},"0.000150590320599495","TRINITY_DN43444_c3_g6_i1","MRH1_ARATH^MRH1_ARATH^Q:2327-249,H:4-677^48.31%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase MRH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43444_c3_g6_i1.p1","243-2348[-]","MRH1_ARATH^MRH1_ARATH^Q:8-701,H:4-678^48.59%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase MRH1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^31-70^E:1.5e-10`PF13516.3^LRR_6^Leucine Rich repeat^120-135^E:0.89`PF00560.30^LRR_1^Leucine Rich Repeat^122-144^E:0.37`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^433-669^E:2.1e-20`PF00069.22^Pkinase^Protein kinase domain^442-668^E:1.1e-12`PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^610-617^E:11000","sigP:1^29^0.81^YES",".","ENOG410ZQU1^LRR receptor-like serine threonine-protein kinase","KEGG:ath:AT4G18640","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048765^biological_process^root hair cell differentiation","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN45356_c2_g3","leaves S. yangii","roots S. yangii",-1.5718297327355,{"v":9103199712.88306,"d":"9.10E+09"},"0.000138641764773949","TRINITY_DN45356_c2_g3_i1","R1A6_SOLDE^R1A6_SOLDE^Q:42-1406,H:507-976^34.8%ID^E:4e-71^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45356_c2_g3_i1.p1","78-1406[+]","R1A6_SOLDE^R1A6_SOLDE^Q:2-443,H:524-976^35%ID^E:7e-74^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^14-288^E:5.8e-73",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46791_c5_g11","leaves S. yangii","roots S. yangii",-1.57648642536295,"0.00594889588590132","0.00796359370313007","TRINITY_DN46791_c5_g11_i1","SMC4_ARATH^SMC4_ARATH^Q:160-3147,H:1-994^66%ID^E:0^RecName: Full=Structural maintenance of chromosomes protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SMC4_ARATH^SMC4_ARATH^Q:3288-4022,H:994-1238^87.35%ID^E:4e-135^RecName: Full=Structural maintenance of chromosomes protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46791_c5_g11_i1.p1","148-3150[+]","SMC4_ARATH^SMC4_ARATH^Q:5-1000,H:1-994^66%ID^E:0^RecName: Full=Structural maintenance of chromosomes protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02463.16^SMC_N^RecF/RecN/SMC N terminal domain^29-780^E:4.3e-39`PF13476.3^AAA_23^AAA domain^33-291^E:2.6e-12`PF06470.10^SMC_hinge^SMC proteins Flexible Hinge Domain^559-675^E:9.6e-21",".",".","COG1196^Required for chromosome condensation and partitioning (By similarity)",".","GO:0005694^cellular_component^chromosome`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0051301^biological_process^cell division`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0051321^biological_process^meiotic cell cycle`GO:0007076^biological_process^mitotic chromosome condensation`GO:0000070^biological_process^mitotic sister chromatid segregation","GO:0005515^molecular_function^protein binding`GO:0005524^molecular_function^ATP binding`GO:0051276^biological_process^chromosome organization`GO:0005694^cellular_component^chromosome",".","."]
["TRINITY_DN36856_c0_g1","leaves S. yangii","roots S. yangii",-1.57848526737619,"0.00126420811010088","0.00178099061025551","TRINITY_DN36856_c0_g1_i1","Y1572_ARATH^Y1572_ARATH^Q:790-248,H:7-190^43.72%ID^E:2e-26^RecName: Full=WEB family protein At1g75720;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36856_c0_g1_i1.p1","221-928[-]","Y1572_ARATH^Y1572_ARATH^Q:47-227,H:7-190^44%ID^E:5e-28^RecName: Full=WEB family protein At1g75720;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^26^0.643^YES",".","ENOG410YQJI^NA","KEGG:ath:AT1G75720",".",".",".","."]
["TRINITY_DN40913_c0_g2","leaves S. yangii","roots S. yangii",-1.5809372468444,"0.00244090955579519","0.0033694755892319","TRINITY_DN40913_c0_g2_i3","POK2_ARATH^POK2_ARATH^Q:409-2124,H:180-760^54.51%ID^E:1e-179^RecName: Full=Phragmoplast orienting kinesin 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40913_c0_g2_i3.p1","196-4542[+]","POK2_ARATH^POK2_ARATH^Q:72-643,H:180-760^54.51%ID^E:0^RecName: Full=Phragmoplast orienting kinesin 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16796.2^Microtub_bd^Microtubule binding^85-237^E:2e-22`PF00225.20^Kinesin^Kinesin motor domain^91-421^E:8.6e-110`PF12711.4^Kinesin-relat_1^Kinesin motor^553-638^E:2.7e-24",".",".","COG5059^Kinesin family member","KEGG:ath:AT3G19050`KO:K10400","GO:0005871^cellular_component^kinesin complex`GO:0005874^cellular_component^microtubule`GO:0009524^cellular_component^phragmoplast`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0003777^molecular_function^microtubule motor activity`GO:0000911^biological_process^cytokinesis by cell plate formation`GO:0007018^biological_process^microtubule-based movement`GO:0000281^biological_process^mitotic cytokinesis","GO:0008017^molecular_function^microtubule binding`GO:0003777^molecular_function^microtubule motor activity`GO:0005524^molecular_function^ATP binding`GO:0007018^biological_process^microtubule-based movement",".","."]
["TRINITY_DN43367_c2_g2","leaves S. yangii","roots S. yangii",-1.58169981675821,"0.000705850346894729","0.00101379387086763","TRINITY_DN43367_c2_g2_i3","SY111_ARATH^SY111_ARATH^Q:2108-1176,H:1-310^65.51%ID^E:4e-126^RecName: Full=Syntaxin-related protein KNOLLE;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43367_c2_g2_i3.p1","1173-2192[-]","SY111_ARATH^SY111_ARATH^Q:29-339,H:1-310^65.51%ID^E:3e-131^RecName: Full=Syntaxin-related protein KNOLLE;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00804.22^Syntaxin^Syntaxin^69-276^E:8.2e-67`PF05739.16^SNARE^SNARE domain^277-329^E:2.4e-16",".",".","COG5074^SYNtaxin","KEGG:ath:AT1G08560`KO:K08486","GO:0009504^cellular_component^cell plate`GO:0012505^cellular_component^endomembrane system`GO:0016021^cellular_component^integral component of membrane`GO:0009524^cellular_component^phragmoplast`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0031201^cellular_component^SNARE complex`GO:0000149^molecular_function^SNARE binding`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0006887^biological_process^exocytosis`GO:0006886^biological_process^intracellular protein transport`GO:0048278^biological_process^vesicle docking`GO:0006906^biological_process^vesicle fusion","GO:0016020^cellular_component^membrane`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN35997_c0_g1","leaves S. yangii","roots S. yangii",-1.58599633732296,"0.000593199832140501","0.000857049106931377","TRINITY_DN35997_c0_g1_i2","PUB26_ARATH^PUB26_ARATH^Q:428-646,H:12-84^61.64%ID^E:3e-23^RecName: Full=U-box domain-containing protein 26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35997_c0_g1_i2.p1","413-1465[+]","PUB25_ARATH^PUB25_ARATH^Q:6-335,H:12-384^28.91%ID^E:2e-31^RecName: Full=U-box domain-containing protein 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^8-78^E:1.5e-19`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^14-50^E:0.00012",".",".","ENOG410YB5U^Ubox domain-containing protein","KEGG:ath:AT3G19380","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010200^biological_process^response to chitin","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN28799_c0_g1","leaves S. yangii","roots S. yangii",-1.59824565547627,"0.000404011489248703","0.000590579702597009","TRINITY_DN28799_c0_g1_i1","MOB1A_MEDSF^MOB1A_MEDSF^Q:62-703,H:1-214^84.58%ID^E:3e-135^RecName: Full=MOB kinase activator-like 1A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN28799_c0_g1_i1.p1","2-709[+]","MOB1A_MEDSF^MOB1A_MEDSF^Q:21-234,H:1-214^84.58%ID^E:4e-136^RecName: Full=MOB kinase activator-like 1A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF03637.14^Mob1_phocein^Mob1/phocein family^55-224^E:1.8e-74",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0009524^cellular_component^phragmoplast`GO:0046872^molecular_function^metal ion binding",".",".","."]
["TRINITY_DN58651_c0_g1","leaves S. yangii","roots S. yangii",-1.60127435172327,"0.000169644171885763","0.000254339574505353","TRINITY_DN58651_c0_g1_i1","PUB27_ARATH^PUB27_ARATH^Q:341-1537,H:1-420^43.53%ID^E:7e-86^RecName: Full=U-box domain-containing protein 27;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN58651_c0_g1_i1.p1","341-1540[+]","PUB27_ARATH^PUB27_ARATH^Q:1-399,H:1-420^43.53%ID^E:5e-94^RecName: Full=U-box domain-containing protein 27;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^10-74^E:2.9e-18",".",".","ENOG410YF56^Ubox domain-containing protein","KEGG:ath:AT5G64660","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010200^biological_process^response to chitin","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN40463_c0_g1","leaves S. yangii","roots S. yangii",-1.60414185360703,"0.00306555108558651","0.00420054982494562","TRINITY_DN40463_c0_g1_i6","PRI2_ARATH^PRI2_ARATH^Q:194-1534,H:1-449^70.89%ID^E:0^RecName: Full=Probable DNA primase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40463_c0_g1_i6.p1","194-1552[+]","PRI2_ARATH^PRI2_ARATH^Q:1-447,H:1-449^70.89%ID^E:0^RecName: Full=Probable DNA primase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04104.11^DNA_primase_lrg^Eukaryotic and archaeal DNA primase, large subunit^171-436^E:1e-94",".",".",".",".","GO:1990077^cellular_component^primosome complex`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0003677^molecular_function^DNA binding`GO:0003896^molecular_function^DNA primase activity`GO:0046872^molecular_function^metal ion binding","GO:0003896^molecular_function^DNA primase activity`GO:0006269^biological_process^DNA replication, synthesis of RNA primer",".","."]
["TRINITY_DN88071_c0_g1","leaves S. yangii","roots S. yangii",-1.60627372086026,{"v":9153918929.19977,"d":"9.15E+09"},"0.000139388841361081","TRINITY_DN88071_c0_g1_i1","DET2_GOSHI^DET2_GOSHI^Q:710-994,H:163-258^39.6%ID^E:1e-13^RecName: Full=Steroid 5-alpha-reductase DET2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium",".","TRINITY_DN88071_c0_g1_i1.p1","200-997[+]","DET2_GOSHI^DET2_GOSHI^Q:160-265,H:152-258^38.39%ID^E:6e-16^RecName: Full=Steroid 5-alpha-reductase DET2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium","PF02544.13^Steroid_dh^3-oxo-5-alpha-steroid 4-dehydrogenase^126-265^E:2.4e-26",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016021^cellular_component^integral component of membrane`GO:0003865^molecular_function^3-oxo-5-alpha-steroid 4-dehydrogenase activity`GO:0047751^molecular_function^cholestenone 5-alpha-reductase activity`GO:0050213^molecular_function^progesterone 5-alpha-reductase activity`GO:0016132^biological_process^brassinosteroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process`GO:0090378^biological_process^seed trichome elongation`GO:0090377^biological_process^seed trichome initiation","GO:0016627^molecular_function^oxidoreductase activity, acting on the CH-CH group of donors`GO:0006629^biological_process^lipid metabolic process`GO:0005737^cellular_component^cytoplasm`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN39919_c1_g1","leaves S. yangii","roots S. yangii",-1.61518767566022,"0.00354989129630911","0.00483596091478522","TRINITY_DN39919_c1_g1_i2","GUN3_ARATH^GUN3_ARATH^Q:224-982,H:21-274^79.13%ID^E:5e-177^RecName: Full=Endoglucanase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GUN3_ARATH^GUN3_ARATH^Q:1086-1685,H:283-481^65.5%ID^E:5e-177^RecName: Full=Endoglucanase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39919_c1_g1_i2.p1","155-1033[+]","GUN9_ARATH^GUN9_ARATH^Q:7-285,H:4-283^74.29%ID^E:2e-142^RecName: Full=Endoglucanase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00759.16^Glyco_hydro_9^Glycosyl hydrolase family 9^28-286^E:5.1e-91","sigP:1^24^0.865^YES",".","ENOG410YA4V^endo-glucanase","KEGG:ath:AT1G71380","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005794^cellular_component^Golgi apparatus`GO:0009505^cellular_component^plant-type cell wall`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0008810^molecular_function^cellulase activity`GO:0071555^biological_process^cell wall organization`GO:0030245^biological_process^cellulose catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45333_c0_g5","leaves S. yangii","roots S. yangii",-1.61598079759921,"0.00544081201315264","0.00730838828250701","TRINITY_DN45333_c0_g5_i1","COL5_ARATH^COL5_ARATH^Q:983-1225,H:281-348^38.27%ID^E:2e-08^RecName: Full=Zinc finger protein CONSTANS-LIKE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45333_c0_g5_i1.p1","383-1294[+]","COL5_ARATH^COL5_ARATH^Q:201-281,H:281-348^38.27%ID^E:8e-09^RecName: Full=Zinc finger protein CONSTANS-LIKE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06203.11^CCT^CCT motif^205-247^E:8.8e-19",".",".","COG5641^Transcription factor","KEGG:ath:AT5G57660","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0009909^biological_process^regulation of flower development`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009416^biological_process^response to light stimulus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45074_c3_g3","leaves S. yangii","roots S. yangii",-1.62169895277398,"0.00399426982209953","0.00542454653690188","TRINITY_DN45074_c3_g3_i4","BH074_ARATH^BH074_ARATH^Q:586-1074,H:178-366^52.63%ID^E:7e-39^RecName: Full=Transcription factor bHLH74;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45074_c3_g3_i4.p1","286-1077[+]","BH074_ARATH^BH074_ARATH^Q:101-263,H:178-366^52.63%ID^E:2e-52^RecName: Full=Transcription factor bHLH74;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^139-187^E:1.6e-07",".",".","ENOG4111DWU^Transcription factor","KEGG:ath:AT1G10120","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0040008^biological_process^regulation of growth`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN87332_c0_g1","leaves S. yangii","roots S. yangii",-1.62600728876363,"0.00368251389991612","0.00501282104753172","TRINITY_DN87332_c0_g1_i1","POLX_TOBAC^POLX_TOBAC^Q:949-254,H:378-609^35.15%ID^E:1e-45^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`POLX_TOBAC^POLX_TOBAC^Q:257-9,H:609-691^37.35%ID^E:1e-45^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN87332_c0_g1_i1.p1","218-976[-]","POLX_TOBAC^POLX_TOBAC^Q:10-241,H:378-609^35.15%ID^E:7e-36^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF13976.3^gag_pre-integrs^GAG-pre-integrase domain^30-97^E:1e-09`PF00665.23^rve^Integrase core domain^111-225^E:2.6e-23",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration","GO:0015074^biological_process^DNA integration",".","."]
["TRINITY_DN44380_c6_g4","leaves S. yangii","roots S. yangii",-1.63782197249756,"0.000386259874492163","0.000565486979947224","TRINITY_DN44380_c6_g4_i1","RGP1_ORYSJ^RGP1_ORYSJ^Q:78-1157,H:5-364^86.11%ID^E:0^RecName: Full=UDP-arabinopyranose mutase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44380_c6_g4_i1.p1","96-1160[+]","RGP1_ORYSJ^RGP1_ORYSJ^Q:4-354,H:14-364^87.75%ID^E:0^RecName: Full=UDP-arabinopyranose mutase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF03214.10^RGP^Reversibly glycosylated polypeptide^8-342^E:5.8e-179",".",".","ENOG411144T^reversibly glycosylated polypeptide","KEGG:osa:4333393`KO:K13379","GO:0005829^cellular_component^cytosol`GO:0005794^cellular_component^Golgi apparatus`GO:0016866^molecular_function^intramolecular transferase activity`GO:0052691^molecular_function^UDP-arabinopyranose mutase activity`GO:0071555^biological_process^cell wall organization`GO:0030244^biological_process^cellulose biosynthetic process`GO:0009832^biological_process^plant-type cell wall biogenesis`GO:0033356^biological_process^UDP-L-arabinose metabolic process","GO:0016866^molecular_function^intramolecular transferase activity`GO:0030244^biological_process^cellulose biosynthetic process",".","."]
["TRINITY_DN44241_c1_g1","leaves S. yangii","roots S. yangii",-1.64400431192596,"0.00031540740746997","0.000464386289109203","TRINITY_DN44241_c1_g1_i4","DBNBT_TAXCA^DBNBT_TAXCA^Q:1374-241,H:8-423^31.35%ID^E:6e-55^RecName: Full=3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Cupressales; Taxaceae; Taxus",".","TRINITY_DN44241_c1_g1_i4.p1","211-1377[-]","DBNBT_TAXCA^DBNBT_TAXCA^Q:2-347,H:8-386^33.07%ID^E:8e-60^RecName: Full=3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Cupressales; Taxaceae; Taxus","PF02458.12^Transferase^Transferase family^10-110^E:1.3e-17`PF02458.12^Transferase^Transferase family^117-349^E:2.1e-37",".",".",".",".","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0042617^biological_process^paclitaxel biosynthetic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN46596_c0_g12","leaves S. yangii","roots S. yangii",-1.65120478553357,"0.00113591050877116","0.00160565563411744","TRINITY_DN46596_c0_g12_i3","PP317_ARATH^PP317_ARATH^Q:849-2690,H:60-673^44.12%ID^E:7e-154^RecName: Full=Pentatricopeptide repeat-containing protein At4g17616;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46596_c0_g12_i3.p1","636-2696[+]","PP317_ARATH^PP317_ARATH^Q:72-685,H:60-673^44.12%ID^E:3e-174^RecName: Full=Pentatricopeptide repeat-containing protein At4g17616;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^460-489^E:0.066",".",".","ENOG410ZJZY^Pentatricopeptide repeat-containing protein","KEGG:ath:AT4G17616",".",".",".","."]
["TRINITY_DN45203_c3_g2","leaves S. yangii","roots S. yangii",-1.66506140450423,"0.000835315153990777","0.00119372866605276","TRINITY_DN45203_c3_g2_i4","CAES_ARATH^CAES_ARATH^Q:997-299,H:21-256^54.58%ID^E:5e-75^RecName: Full=Probable carbohydrate esterase At4g34215;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45203_c3_g2_i4.p1","182-1063[-]","CAES_ARATH^CAES_ARATH^Q:23-255,H:21-256^54.58%ID^E:2e-80^RecName: Full=Probable carbohydrate esterase At4g34215;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03629.15^SASA^Carbohydrate esterase, sialic acid-specific acetylesterase^148-227^E:2.5e-09","sigP:1^19^0.866^YES",".","ENOG4111I8E^Carbohydrate esterase","KEGG:ath:AT4G34215","GO:0016787^molecular_function^hydrolase activity",".",".","."]
["TRINITY_DN40204_c0_g2","leaves S. yangii","roots S. yangii",-1.66522105698264,"0.000316488164637639","0.00046595019240562","TRINITY_DN40204_c0_g2_i1","CLPB1_ARATH^CLPB1_ARATH^Q:2067-2762,H:566-782^30.86%ID^E:2e-17^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPB1_ARATH^CLPB1_ARATH^Q:879-1787,H:610-862^22.55%ID^E:2e-11^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40204_c0_g2_i1.p1","1068-2906[+]","CLPB1_ARATH^CLPB1_ARATH^Q:334-565,H:566-782^30.86%ID^E:2e-24^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPB1_ARATH^CLPB1_ARATH^Q:19-240,H:667-862^23.89%ID^E:3e-09^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^372-544^E:1.7e-05",".",".","COG0542^ATP-dependent CLP protease ATP-binding subunit","KEGG:ath:AT1G74310`KO:K03695","GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0045727^biological_process^positive regulation of translation`GO:0019538^biological_process^protein metabolic process`GO:0043335^biological_process^protein unfolding`GO:0009408^biological_process^response to heat`GO:0009644^biological_process^response to high light intensity`GO:0042542^biological_process^response to hydrogen peroxide","GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44730_c0_g2","leaves S. yangii","roots S. yangii",-1.66868301039463,"0.00343330112177916","0.00468323322927328","TRINITY_DN44730_c0_g2_i1","R13L1_ARATH^R13L1_ARATH^Q:2-466,H:671-823^36.59%ID^E:2e-23^RecName: Full=Putative disease resistance RPP13-like protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44730_c0_g2_i1.p1","2-466[+]","R13L1_ARATH^R13L1_ARATH^Q:1-155,H:671-823^36.59%ID^E:2e-23^RecName: Full=Putative disease resistance RPP13-like protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G14470","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN45371_c1_g7","leaves S. yangii","roots S. yangii",-1.69178815576329,"0.000347767252708366","0.000510652798196077","TRINITY_DN45371_c1_g7_i1","H32_TOBAC^H32_TOBAC^Q:650-270,H:1-127^100%ID^E:7e-70^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45371_c1_g7_i1.p1","240-650[-]","H32_TOBAC^H32_TOBAC^Q:1-136,H:1-136^100%ID^E:3e-93^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^1-132^E:8.3e-55",".",".",".",".","GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN45391_c0_g1","leaves S. yangii","roots S. yangii",-1.70515893154751,"0.00316264825393469","0.0043286333213757","TRINITY_DN45391_c0_g1_i1","NET4A_ARATH^NET4A_ARATH^Q:1032-1766,H:360-557^24.29%ID^E:3e-07^RecName: Full=Protein NETWORKED 4A {ECO:0000303|PubMed:22840520};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45391_c0_g1_i1.p1","264-1769[+]","NET4A_ARATH^NET4A_ARATH^Q:11-501,H:29-557^22.2%ID^E:4e-11^RecName: Full=Protein NETWORKED 4A {ECO:0000303|PubMed:22840520};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07765.9^KIP1^KIP1-like protein^11-77^E:2.1e-06",".",".","ENOG410YMAJ^Kinase interacting","KEGG:ath:AT5G58320","GO:0005774^cellular_component^vacuolar membrane","GO:0003779^molecular_function^actin binding",".","."]
["TRINITY_DN45975_c0_g4","leaves S. yangii","roots S. yangii",-1.70620325724041,"0.000764993885215279","0.00109585515973301","TRINITY_DN45975_c0_g4_i1","ENOX_SOLLC^ENOX_SOLLC^Q:12-989,H:69-378^63.19%ID^E:2e-102^RecName: Full=2-methylene-furan-3-one reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45975_c0_g4_i1.p1","3-1022[+]","QORL_ARATH^QORL_ARATH^Q:14-339,H:77-386^64.72%ID^E:1e-140^RecName: Full=Quinone oxidoreductase-like protein At1g23740, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^43-109^E:1.5e-08`PF07709.8^SRR^Seven Residue Repeat^148-157^E:35`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^175-262^E:9.9e-16`PF13602.3^ADH_zinc_N_2^Zinc-binding dehydrogenase^208-335^E:3e-17`PF07709.8^SRR^Seven Residue Repeat^314-325^E:120",".",".","COG0604^alcohol dehydrogenase","KEGG:ath:AT1G23740`KO:K18980","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0010319^cellular_component^stromule`GO:0009579^cellular_component^thylakoid`GO:0035798^molecular_function^2-alkenal reductase (NADP+) activity`GO:0035671^molecular_function^enone reductase activity`GO:0008270^molecular_function^zinc ion binding`GO:0055114^biological_process^oxidation-reduction process`GO:0009409^biological_process^response to cold","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN28620_c0_g1","leaves S. yangii","roots S. yangii",-1.71151919125851,"0.000273705469026866","0.000404744119421262","TRINITY_DN28620_c0_g1_i1","ENT8_ARATH^ENT8_ARATH^Q:104-1246,H:13-389^59.16%ID^E:9e-132^RecName: Full=Equilibrative nucleotide transporter 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28620_c0_g1_i1.p1","89-1246[+]","ENT8_ARATH^ENT8_ARATH^Q:6-386,H:13-389^59.16%ID^E:3e-166^RecName: Full=Equilibrative nucleotide transporter 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01733.15^Nucleoside_tran^Nucleoside transporter^114-209^E:7.9e-20`PF01733.15^Nucleoside_tran^Nucleoside transporter^225-384^E:4e-37",".",".","ENOG410Y3MT^solute carrier family 29 (nucleoside transporters), member","KEGG:ath:AT1G02630`KO:K15014","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005337^molecular_function^nucleoside transmembrane transporter activity","GO:0005337^molecular_function^nucleoside transmembrane transporter activity`GO:0006810^biological_process^transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN41829_c0_g3","leaves S. yangii","roots S. yangii",-1.71544156382283,"0.00329589251380174","0.00450289719235497","TRINITY_DN41829_c0_g3_i1","AKT1_ARATH^AKT1_ARATH^Q:133-1587,H:12-490^74.02%ID^E:0^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41829_c0_g3_i1.p1","94-1587[+]","AKT1_ARATH^AKT1_ARATH^Q:14-498,H:12-490^74.02%ID^E:0^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00520.28^Ion_trans^Ion transport protein^60-307^E:7.3e-34`PF07885.13^Ion_trans_2^Ion channel^245-300^E:1.4e-12`PF00027.26^cNMP_binding^Cyclic nucleotide-binding domain^400-484^E:1.3e-13",".",".","ENOG410XPSE^Potassium voltage-gated channel, subfamily H (Eag-related), member","KEGG:ath:AT2G26650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0042802^molecular_function^identical protein binding`GO:0005242^molecular_function^inward rectifier potassium channel activity`GO:0010107^biological_process^potassium ion import`GO:0006813^biological_process^potassium ion transport`GO:0042391^biological_process^regulation of membrane potential`GO:0090333^biological_process^regulation of stomatal closure`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0048767^biological_process^root hair elongation","GO:0005216^molecular_function^ion channel activity`GO:0006811^biological_process^ion transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN43991_c0_g6","leaves S. yangii","roots S. yangii",-1.7215373103283,"0.00413817189636885","0.00561329451982447","TRINITY_DN43991_c0_g6_i1","R1A4_SOLDE^R1A4_SOLDE^Q:565-212,H:1118-1242^36.8%ID^E:7e-10^RecName: Full=Putative late blight resistance protein homolog R1A-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN43991_c0_g6_i1.p1","170-733[-]","R1A4_SOLDE^R1A4_SOLDE^Q:43-174,H:1104-1242^36.69%ID^E:2e-12^RecName: Full=Putative late blight resistance protein homolog R1A-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46337_c1_g1","leaves S. yangii","roots S. yangii",-1.72918668655731,"0.0123125726911538","0.0160442558937222","TRINITY_DN46337_c1_g1_i10","FRS5_ARATH^FRS5_ARATH^Q:2261-1068,H:72-467^35.71%ID^E:7e-90^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FRS5_ARATH^FRS5_ARATH^Q:1033-443,H:479-673^31.5%ID^E:7e-90^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46337_c1_g1_i10.p1","972-2315[-]","FRS5_ARATH^FRS5_ARATH^Q:19-429,H:72-480^36.04%ID^E:6e-76^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03101.12^FAR1^FAR1 DNA-binding domain^34-130^E:3.8e-21`PF10551.6^MULE^MULE transposase domain^251-343^E:6.1e-32",".",".","ENOG410ZJSX^protein FAR1-RELATED SEQUENCE 5-like","KEGG:ath:AT4G38180","GO:0005634^cellular_component^nucleus`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN36770_c0_g1","leaves S. yangii","roots S. yangii",-1.73622101937181,"0.000600490260504093","0.000866983291773716","TRINITY_DN36770_c0_g1_i1","3AT2_ARATH^3AT2_ARATH^Q:230-1603,H:1-458^35.96%ID^E:2e-57^RecName: Full=Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36770_c0_g1_i1.p1","230-1609[+]","3AT2_ARATH^3AT2_ARATH^Q:1-458,H:1-458^36.38%ID^E:8e-86^RecName: Full=Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02458.12^Transferase^Transferase family^8-454^E:2.9e-37",".",".","ENOG410ZBAM^Anthocyanin 5-aromatic","KEGG:ath:AT1G03495","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN45904_c2_g8","leaves S. yangii","roots S. yangii",-1.74322175038965,"0.000488022128832395","0.000709377546781221","TRINITY_DN45904_c2_g8_i1","DCL4_ARATH^DCL4_ARATH^Q:1563-1345,H:113-185^75.34%ID^E:2e-28^RecName: Full=Dicer-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45904_c2_g8_i1.p1","1150-1578[-]","DCL4_ARATH^DCL4_ARATH^Q:6-78,H:113-185^75.34%ID^E:1e-31^RecName: Full=Dicer-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00270.26^DEAD^DEAD/DEAH box helicase^19-79^E:7.7e-07`PF04851.12^ResIII^Type III restriction enzyme, res subunit^26-79^E:2e-06",".",".","COG0571^Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)`COG1111^helicase",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0016442^cellular_component^RISC complex`GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0046872^molecular_function^metal ion binding`GO:0004525^molecular_function^ribonuclease III activity`GO:0003723^molecular_function^RNA binding`GO:0051607^biological_process^defense response to virus`GO:0006353^biological_process^DNA-templated transcription, termination`GO:0010216^biological_process^maintenance of DNA methylation`GO:0010599^biological_process^production of lsiRNA involved in RNA interference`GO:0030422^biological_process^production of siRNA involved in RNA interference`GO:0010267^biological_process^production of ta-siRNAs involved in RNA interference`GO:0090501^biological_process^RNA phosphodiester bond hydrolysis`GO:0090502^biological_process^RNA phosphodiester bond hydrolysis, endonucleolytic`GO:0010050^biological_process^vegetative phase change`GO:0009616^biological_process^virus induced gene silencing","GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN45875_c5_g4","leaves S. yangii","roots S. yangii",-1.74709029255118,"0.000174484616874197","0.000261487277264711","TRINITY_DN45875_c5_g4_i1","ECP40_DAUCA^ECP40_DAUCA^Q:727-626,H:1-34^79.41%ID^E:3e-09^RecName: Full=Embryogenic cell protein 40;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN45875_c5_g4_i1.p1","281-727[-]","DHLE_RAPSA^DHLE_RAPSA^Q:1-148,H:1-183^49.46%ID^E:1e-27^RecName: Full=Late embryogenesis abundant protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus","PF00257.16^Dehydrin^Dehydrin^64-145^E:6.2e-31",".",".",".",".","GO:0006950^biological_process^response to stress`GO:0009415^biological_process^response to water","GO:0006950^biological_process^response to stress`GO:0009415^biological_process^response to water",".","."]
["TRINITY_DN45020_c1_g1","leaves S. yangii","roots S. yangii",-1.77228350139912,"0.00165658892410056","0.00231363768931091","TRINITY_DN45020_c1_g1_i1","RQL5_ARATH^RQL5_ARATH^Q:3665-1101,H:80-908^57.6%ID^E:0^RecName: Full=ATP-dependent DNA helicase Q-like 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45020_c1_g1_i1.p1","1098-3785[-]","RQL5_ARATH^RQL5_ARATH^Q:9-895,H:36-908^56.72%ID^E:0^RecName: Full=ATP-dependent DNA helicase Q-like 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00270.26^DEAD^DEAD/DEAH box helicase^260-422^E:4.4e-17`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^459-568^E:2.4e-17",".",".","COG0514^atp-dependent dna helicase","KEGG:ath:AT1G27880`KO:K10730","GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0008026^molecular_function^ATP-dependent helicase activity`GO:0003676^molecular_function^nucleic acid binding`GO:0042631^biological_process^cellular response to water deprivation`GO:0006310^biological_process^DNA recombination","GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46788_c1_g2","leaves S. yangii","roots S. yangii",-1.77229787001611,"0.0018996920030339","0.00264052453659035","TRINITY_DN46788_c1_g2_i5","CRK8_ARATH^CRK8_ARATH^Q:885-157,H:434-676^53.85%ID^E:2e-81^RecName: Full=Cysteine-rich receptor-like protein kinase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46788_c1_g2_i5.p1","154-690[-]","CRK8_ARATH^CRK8_ARATH^Q:1-178,H:499-676^52.2%ID^E:2e-53^RecName: Full=Cysteine-rich receptor-like protein kinase 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^8-127^E:2e-10`PF00069.22^Pkinase^Protein kinase domain^9-126^E:2.7e-09",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G23160","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46394_c1_g1","leaves S. yangii","roots S. yangii",-1.78059288773734,"0.0033118631258864","0.00452422388586604","TRINITY_DN46394_c1_g1_i4","LAF1_ARATH^LAF1_ARATH^Q:164-502,H:1-113^69.91%ID^E:2e-48^RecName: Full=Transcription factor LAF1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46394_c1_g1_i4.p1","164-922[+]","LAF1_ARATH^LAF1_ARATH^Q:1-113,H:1-113^69.91%ID^E:1e-52^RecName: Full=Transcription factor LAF1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^12-59^E:1.5e-13`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^15-75^E:1.8e-08`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^65-110^E:6e-16`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^69-113^E:1e-07",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT4G25560`KO:K09422","GO:0016607^cellular_component^nuclear speck`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010018^biological_process^far-red light signaling pathway`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0009585^biological_process^red, far-red light phototransduction`GO:0009639^biological_process^response to red or far red light`GO:0009751^biological_process^response to salicylic acid`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN64765_c0_g1","leaves S. yangii","roots S. yangii",-1.7813029274239,"0.00407806444635539","0.00553535103822461","TRINITY_DN64765_c0_g1_i1","SBT19_ARATH^SBT19_ARATH^Q:11-322,H:446-547^49.52%ID^E:2e-24^RecName: Full=Subtilisin-like protease SBT1.9 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN64765_c0_g1_i1.p1","2-325[+]","SBT19_ARATH^SBT19_ARATH^Q:4-107,H:446-547^49.52%ID^E:2e-24^RecName: Full=Subtilisin-like protease SBT1.9 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00082.19^Peptidase_S8^Subtilase family^26-107^E:2e-15",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT5G67090","GO:0004252^molecular_function^serine-type endopeptidase activity","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN47240_c1_g1","leaves S. yangii","roots S. yangii",-1.78409525664602,"0.000152486025193469","0.000229217687227031","TRINITY_DN47240_c1_g1_i1","DDM1_ARATH^DDM1_ARATH^Q:2537-288,H:14-764^69.18%ID^E:0^RecName: Full=ATP-dependent DNA helicase DDM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47240_c1_g1_i1.p1","285-2534[-]","DDM1_ARATH^DDM1_ARATH^Q:1-749,H:15-764^69.62%ID^E:0^RecName: Full=ATP-dependent DNA helicase DDM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04851.12^ResIII^Type III restriction enzyme, res subunit^182-344^E:1.5e-06`PF00176.20^SNF2_N^SNF2 family N-terminal domain^190-484^E:5.8e-66`PF00271.28^Helicase_C^Helicase conserved C-terminal domain^508-620^E:4.8e-19",".",".","COG0553^helicase","KEGG:ath:AT5G66750`KO:K19001","GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0004003^molecular_function^ATP-dependent DNA helicase activity`GO:0016887^molecular_function^ATPase activity`GO:0003677^molecular_function^DNA binding`GO:0032508^biological_process^DNA duplex unwinding`GO:0009294^biological_process^DNA mediated transformation`GO:0006344^biological_process^maintenance of chromatin silencing`GO:0006346^biological_process^methylation-dependent chromatin silencing`GO:0090241^biological_process^negative regulation of histone H4 acetylation`GO:0051574^biological_process^positive regulation of histone H3-K9 methylation`GO:0044030^biological_process^regulation of DNA methylation`GO:0006349^biological_process^regulation of gene expression by genetic imprinting`GO:0006351^biological_process^transcription, DNA-templated`GO:0032197^biological_process^transposition, RNA-mediated","GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN46385_c1_g2","leaves S. yangii","roots S. yangii",-1.78910292050509,"0.000256449676171584","0.000380122914960846","TRINITY_DN46385_c1_g2_i2","CID4_ARATH^CID4_ARATH^Q:283-567,H:47-146^41%ID^E:3e-16^RecName: Full=Polyadenylate-binding protein-interacting protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46385_c1_g2_i2.p1","193-639[+]","CID4_ARATH^CID4_ARATH^Q:4-125,H:16-146^35.11%ID^E:7e-17^RecName: Full=Polyadenylate-binding protein-interacting protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14438.3^SM-ATX^Ataxin 2 SM domain^31-109^E:4.7e-23",".",".","COG5180^stress granule assembly","KEGG:ath:AT3G14010","GO:0010494^cellular_component^cytoplasmic stress granule`GO:0044822^molecular_function^poly(A) RNA binding`GO:0010603^biological_process^regulation of cytoplasmic mRNA processing body assembly`GO:0034063^biological_process^stress granule assembly",".",".","."]
["TRINITY_DN46922_c0_g4","leaves S. yangii","roots S. yangii",-1.80906114384542,"0.00119081641241127","0.00168042783883678","TRINITY_DN46922_c0_g4_i6","Y3236_ARATH^Y3236_ARATH^Q:1237-572,H:268-492^26.96%ID^E:9e-08^RecName: Full=Ankyrin repeat-containing protein At3g12360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46922_c0_g4_i6.p1","320-1756[-]","Y3236_ARATH^Y3236_ARATH^Q:174-395,H:268-492^26.96%ID^E:5e-08^RecName: Full=Ankyrin repeat-containing protein At3g12360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^171-227^E:3.4e-06`PF13962.3^PGG^Domain of unknown function^313-424^E:8.4e-27",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT3G12360","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0034613^biological_process^cellular protein localization`GO:0009651^biological_process^response to salt stress",".",".","."]
["TRINITY_DN46092_c4_g2","leaves S. yangii","roots S. yangii",-1.81028387668247,"0.0016402945518056","0.00229151815142025","TRINITY_DN46092_c4_g2_i6","NEDD1_ARATH^NEDD1_ARATH^Q:2163-190,H:9-782^40.91%ID^E:9e-146^RecName: Full=Protein NEDD1 {ECO:0000303|PubMed:19383896};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NEDD1_ARATH^NEDD1_ARATH^Q:1697-1527,H:181-236^66.67%ID^E:3e-15^RecName: Full=Protein NEDD1 {ECO:0000303|PubMed:19383896};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46092_c4_g2_i6.p1","187-1245[-]","NEDD1_ARATH^NEDD1_ARATH^Q:1-352,H:347-782^34.01%ID^E:6e-38^RecName: Full=Protein NEDD1 {ECO:0000303|PubMed:19383896};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZQNY^neural precursor cell expressed, developmentally down-regulated 1","KEGG:ath:AT5G05970`KO:K16547","GO:0000777^cellular_component^condensed chromosome kinetochore`GO:0005828^cellular_component^kinetochore microtubule`GO:0005635^cellular_component^nuclear envelope`GO:0009524^cellular_component^phragmoplast`GO:0000919^biological_process^cell plate assembly`GO:0009553^biological_process^embryo sac development`GO:0009555^biological_process^pollen development`GO:0032467^biological_process^positive regulation of cytokinesis`GO:0060236^biological_process^regulation of mitotic spindle organization`GO:2000694^biological_process^regulation of phragmoplast microtubule organization",".",".","."]
["TRINITY_DN37893_c0_g2","leaves S. yangii","roots S. yangii",-1.81867910309645,"0.00735195051883123","0.00976214551431686","TRINITY_DN37893_c0_g2_i3","BB_ARATH^BB_ARATH^Q:527-264,H:142-232^45.16%ID^E:4e-19^RecName: Full=E3 ubiquitin ligase BIG BROTHER;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37893_c0_g2_i3.p1","234-764[-]","BB_ARATH^BB_ARATH^Q:80-167,H:142-232^45.16%ID^E:5e-20^RecName: Full=E3 ubiquitin ligase BIG BROTHER;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^131-166^E:1.1e-08`PF17123.2^zf-RING_11^RING-like zinc finger^132-159^E:5.6e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^132-164^E:9e-05`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^132-162^E:0.0011",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT3G63530`KO:K19045","GO:0016874^molecular_function^ligase activity`GO:0031624^molecular_function^ubiquitin conjugating enzyme binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0048437^biological_process^floral organ development`GO:0046621^biological_process^negative regulation of organ growth`GO:0051865^biological_process^protein autoubiquitination`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN35559_c0_g1","leaves S. yangii","roots S. yangii",-1.8295438501294,{"v":9742898272.44578,"d":"9.74E+09"},"0.000148069869221401","TRINITY_DN35559_c0_g1_i2","AT21A_ARATH^AT21A_ARATH^Q:2385-1879,H:30-201^34.29%ID^E:6e-21^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AT21A_ARATH^AT21A_ARATH^Q:639-463,H:305-364^41.67%ID^E:1e-07^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35559_c0_g1_i2.p1","454-2463[-]","AT21A_ARATH^AT21A_ARATH^Q:27-202,H:30-208^35.71%ID^E:7e-26^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AT21A_ARATH^AT21A_ARATH^Q:609-667,H:305-364^41.67%ID^E:4e-08^RecName: Full=Putative RING-H2 finger protein ATL21A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^621-665^E:9.2e-14`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^623-664^E:6.3e-09`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^623-665^E:3.9e-08`PF17123.2^zf-RING_11^RING-like zinc finger^623-651^E:1.3e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^623-662^E:1.2e-06`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^623-664^E:2.9e-05","sigP:1^18^0.863^YES",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT2G46495","GO:0016021^cellular_component^integral component of membrane`GO:0030247^molecular_function^polysaccharide binding`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN46825_c0_g1","leaves S. yangii","roots S. yangii",-1.83878836013066,"0.000165429996609094","0.000248169716952706","TRINITY_DN46825_c0_g1_i10","RNHX1_ARATH^RNHX1_ARATH^Q:1421-1161,H:24-116^34.41%ID^E:7e-10^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RNHX1_ARATH^RNHX1_ARATH^Q:1152-928,H:120-191^31.17%ID^E:7e-10^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46825_c0_g1_i10.p1","1152-1502[-]","RNHX1_ARATH^RNHX1_ARATH^Q:28-114,H:24-116^34.41%ID^E:6e-11^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".",".",".","GO:0046872^molecular_function^metal ion binding`GO:0003676^molecular_function^nucleic acid binding`GO:0004523^molecular_function^RNA-DNA hybrid ribonuclease activity",".",".","."]
["TRINITY_DN35218_c0_g1","leaves S. yangii","roots S. yangii",-1.84293089121678,"0.0125479469974906","0.0163399376218879","TRINITY_DN35218_c0_g1_i1","RA211_ARATH^RA211_ARATH^Q:898-251,H:19-253^45.38%ID^E:3e-37^RecName: Full=Ethylene-responsive transcription factor RAP2-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35218_c0_g1_i1.p1","248-1075[-]","RA211_ARATH^RA211_ARATH^Q:60-275,H:19-253^46.18%ID^E:4e-51^RecName: Full=Ethylene-responsive transcription factor RAP2-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^61-111^E:3.8e-13",".",".","ENOG410YYMH^Transcription factor","KEGG:ath:AT5G19790`KO:K09286","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0035865^biological_process^cellular response to potassium ion`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0048528^biological_process^post-embryonic root development`GO:0009723^biological_process^response to ethylene`GO:0000302^biological_process^response to reactive oxygen species`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46542_c2_g5","leaves S. yangii","roots S. yangii",-1.8633121975865,"0.000374729109591614","0.000549054281545489","TRINITY_DN46542_c2_g5_i1","PER66_ARATH^PER66_ARATH^Q:167-1030,H:12-300^68.51%ID^E:9e-137^RecName: Full=Peroxidase 66;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46542_c2_g5_i1.p1","137-1099[+]","PER66_ARATH^PER66_ARATH^Q:11-320,H:12-322^67.52%ID^E:1e-154^RecName: Full=Peroxidase 66;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^42-286^E:1.4e-72","sigP:1^24^0.751^YES",".","ENOG410YFBY^peroxidase","KEGG:ath:AT5G51890`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN24385_c0_g1","leaves S. yangii","roots S. yangii",-1.88464512971949,"0.000865151170537237","0.0012346792024909","TRINITY_DN24385_c0_g1_i1","NIK2_ARATH^NIK2_ARATH^Q:338-2224,H:55-582^29.33%ID^E:9e-68^RecName: Full=Protein NSP-INTERACTING KINASE 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN24385_c0_g1_i1.p1","218-2239[+]","NIK2_ARATH^NIK2_ARATH^Q:33-669,H:46-582^29.54%ID^E:2e-76^RecName: Full=Protein NSP-INTERACTING KINASE 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^32-68^E:2.5e-07`PF13855.3^LRR_8^Leucine rich repeat^143-203^E:2.7e-08`PF00069.22^Pkinase^Protein kinase domain^407-666^E:1.8e-26`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^409-668^E:8.2e-38","sigP:1^21^0.864^YES",".","ENOG410ZS46^NSP-interacting kinase",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006952^biological_process^defense response`GO:0016032^biological_process^viral process","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN44315_c0_g1","leaves S. yangii","roots S. yangii",-1.90420217554186,"0.00171907025968015","0.00239796494007744","TRINITY_DN44315_c0_g1_i7","DRL7_ARATH^DRL7_ARATH^Q:2224-242,H:188-878^31.37%ID^E:4e-53^RecName: Full=Probable disease resistance protein At1g58390;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44315_c0_g1_i7.p1","170-2461[-]","DRL7_ARATH^DRL7_ARATH^Q:52-740,H:162-878^31.13%ID^E:1e-60^RecName: Full=Probable disease resistance protein At1g58390;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^67-340^E:1.8e-43",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G58390","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45037_c8_g3","leaves S. yangii","roots S. yangii",-1.91816619696968,{"v":9940596865.23153,"d":"9.94E+09"},"0.000150983004859802","TRINITY_DN45037_c8_g3_i1","TLPH_ARATH^TLPH_ARATH^Q:1257-604,H:18-239^57.14%ID^E:8e-79^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45037_c8_g3_i1.p1","319-1323[-]","TLPH_ARATH^TLPH_ARATH^Q:23-240,H:18-239^57.14%ID^E:1e-81^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00314.14^Thaumatin^Thaumatin family^32-240^E:4.1e-82","sigP:1^25^0.817^YES",".","ENOG4111KEV^thaumatin-like protein",".",".",".",".","."]
["TRINITY_DN47354_c2_g1","leaves S. yangii","roots S. yangii",-1.91915751163429,"0.000493765898513137","0.000717518760224997","TRINITY_DN47354_c2_g1_i1","SPX3_ARATH^SPX3_ARATH^Q:964-182,H:1-245^62.36%ID^E:9e-93^RecName: Full=SPX domain-containing protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47354_c2_g1_i1.p1","179-964[-]","SPX3_ARATH^SPX3_ARATH^Q:1-261,H:1-245^64.39%ID^E:7e-106^RecName: Full=SPX domain-containing protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03105.16^SPX^SPX domain^1-37^E:1.4e-11`PF03105.16^SPX^SPX domain^103-161^E:8.4e-11",".",".","ENOG410XU76^SPX domain gene","KEGG:ath:AT2G45130","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016036^biological_process^cellular response to phosphate starvation`GO:0080040^biological_process^positive regulation of cellular response to phosphate starvation",".",".","."]
["TRINITY_DN117452_c0_g1","leaves S. yangii","roots S. yangii",-1.92373771148808,"0.00118284825151951","0.00166984078979207","TRINITY_DN117452_c0_g1_i1","ZAT4_ARATH^ZAT4_ARATH^Q:1173-1544,H:194-314^48.85%ID^E:5e-25^RecName: Full=Zinc finger protein ZAT4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN117452_c0_g1_i1.p1","387-1598[+]","ZAT9_ARATH^ZAT9_ARATH^Q:76-381,H:1-282^26.73%ID^E:9e-24^RecName: Full=Zinc finger protein ZAT9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13912.3^zf-C2H2_6^C2H2-type zinc finger^5-28^E:1.4e-06`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^80-102^E:9.9e-09`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^263-287^E:5.7e-11`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^322-345^E:8.3e-12",".",".","COG5048^Zinc finger protein","KEGG:ath:AT3G60580","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN45795_c1_g2","leaves S. yangii","roots S. yangii",-1.93177740647863,0,0,"TRINITY_DN45795_c1_g2_i7","RBP47_NICPL^RBP47_NICPL^Q:2392-1586,H:80-340^76.58%ID^E:1e-129^RecName: Full=Polyadenylate-binding protein RBP47;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`RBP47_NICPL^RBP47_NICPL^Q:1077-901,H:321-373^44.07%ID^E:2e-06^RecName: Full=Polyadenylate-binding protein RBP47;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45795_c1_g2_i7.p1","1583-2524[-]","RBP47_NICPL^RBP47_NICPL^Q:40-313,H:75-340^78.26%ID^E:1e-151^RecName: Full=Polyadenylate-binding protein RBP47;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`RBP47_NICPL^RBP47_NICPL^Q:50-222,H:178-362^25.39%ID^E:4e-08^RecName: Full=Polyadenylate-binding protein RBP47;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^51-119^E:1.3e-14`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^150-219^E:3.1e-15`PF00076.19^RRM_1^RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)^270-312^E:1.8e-11",".",".",".",".","GO:0010494^cellular_component^cytoplasmic stress granule`GO:0005634^cellular_component^nucleus`GO:0000166^molecular_function^nucleotide binding`GO:0008143^molecular_function^poly(A) binding`GO:0034605^biological_process^cellular response to heat`GO:0006397^biological_process^mRNA processing","GO:0003676^molecular_function^nucleic acid binding",".","."]
["TRINITY_DN46406_c0_g1","leaves S. yangii","roots S. yangii",-1.93198966160607,0,0,"TRINITY_DN46406_c0_g1_i8","IF4A2_NICPL^IF4A2_NICPL^Q:624-1280,H:49-267^94.06%ID^E:1e-144^RecName: Full=Eukaryotic initiation factor 4A-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`IF4A2_NICPL^IF4A2_NICPL^Q:231-410,H:1-59^90%ID^E:2e-26^RecName: Full=Eukaryotic initiation factor 4A-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46406_c0_g1_i8.p1","861-1280[+]","IF4A9_TOBAC^IF4A9_TOBAC^Q:1-140,H:128-267^99.29%ID^E:1e-95^RecName: Full=Eukaryotic initiation factor 4A-9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00270.26^DEAD^DEAD/DEAH box helicase^3-99^E:4.3e-22",".",".",".",".","GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0003743^molecular_function^translation initiation factor activity","GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46294_c2_g3","leaves S. yangii","roots S. yangii",-1.93344609046727,"0.00057414673793901","0.000830573353430793","TRINITY_DN46294_c2_g3_i1","C71A8_MENPI^C71A8_MENPI^Q:162-1523,H:54-500^59.83%ID^E:6e-166^RecName: Full=Cytochrome P450 71A8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN46294_c2_g3_i1.p1","48-1535[+]","C71A8_MENPI^C71A8_MENPI^Q:1-492,H:13-500^59.12%ID^E:0^RecName: Full=Cytochrome P450 71A8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF00067.19^p450^Cytochrome P450^35-475^E:7e-105",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN39670_c0_g1","leaves S. yangii","roots S. yangii",-1.93494439749691,"0.000705690707531804","0.00101362259593739","TRINITY_DN39670_c0_g1_i1","CHIT2_TULBA^CHIT2_TULBA^Q:126-944,H:2-274^67.27%ID^E:2e-123^RecName: Full=Chitinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Liliales; Liliaceae; Tulipa",".","TRINITY_DN39670_c0_g1_i1.p1","30-956[+]","CHIT2_TULBA^CHIT2_TULBA^Q:33-305,H:2-274^67.27%ID^E:1e-129^RecName: Full=Chitinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Liliales; Liliaceae; Tulipa","PF00704.25^Glyco_hydro_18^Glycosyl hydrolases family 18^61-224^E:1.6e-16","sigP:1^23^0.847^YES",".",".",".","GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0000272^biological_process^polysaccharide catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44065_c3_g6","leaves S. yangii","roots S. yangii",-1.93691993410287,"0.001349200834856","0.00189742472129706","TRINITY_DN44065_c3_g6_i2","MCM2_ORYSI^MCM2_ORYSI^Q:3063-271,H:9-960^77.82%ID^E:0^RecName: Full=DNA replication licensing factor MCM2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44065_c3_g6_i2.p1","265-3126[-]","MCM2_ORYSI^MCM2_ORYSI^Q:13-952,H:2-960^77.51%ID^E:0^RecName: Full=DNA replication licensing factor MCM2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF12619.5^MCM2_N^Mini-chromosome maintenance protein 2^50-206^E:2.1e-20`PF14551.3^MCM_N^MCM N-terminal domain^237-353^E:1.9e-20`PF00493.20^MCM^MCM2/3/5 family^504-847^E:2.5e-140`PF07728.11^AAA_5^AAA domain (dynein-related subfamily)^561-680^E:9.3e-06`PF01078.18^Mg_chelatase^Magnesium chelatase, subunit ChlI^615-703^E:1.2e-06",".",".","COG1241^dna replication licensing factor",".","GO:0005829^cellular_component^cytosol`GO:0042555^cellular_component^MCM complex`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0003678^molecular_function^DNA helicase activity`GO:0046872^molecular_function^metal ion binding`GO:0006084^biological_process^acetyl-CoA metabolic process`GO:0008283^biological_process^cell proliferation`GO:0000911^biological_process^cytokinesis by cell plate formation`GO:0006306^biological_process^DNA methylation`GO:0006270^biological_process^DNA replication initiation`GO:0006268^biological_process^DNA unwinding involved in DNA replication`GO:0009790^biological_process^embryo development`GO:0051567^biological_process^histone H3-K9 methylation`GO:0009165^biological_process^nucleotide biosynthetic process`GO:0051726^biological_process^regulation of cell cycle`GO:0042127^biological_process^regulation of cell proliferation`GO:0006275^biological_process^regulation of DNA replication`GO:0009909^biological_process^regulation of flower development`GO:0010082^biological_process^regulation of root meristem growth","GO:0003677^molecular_function^DNA binding`GO:0003678^molecular_function^DNA helicase activity`GO:0005524^molecular_function^ATP binding`GO:0006270^biological_process^DNA replication initiation`GO:0005634^cellular_component^nucleus`GO:0042555^cellular_component^MCM complex`GO:0006260^biological_process^DNA replication`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN36625_c0_g1","leaves S. yangii","roots S. yangii",-1.9456964588541,"0.000472077089065933","0.00068679690592456","TRINITY_DN36625_c0_g1_i1","E131_ARATH^E131_ARATH^Q:1140-889,H:381-465^52.94%ID^E:5e-19^RecName: Full=Glucan endo-1,3-beta-glucosidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN36625_c0_g1_i1.p1","637-1497[-]","E131_ARATH^E131_ARATH^Q:120-206,H:381-468^53.41%ID^E:1e-22^RecName: Full=Glucan endo-1,3-beta-glucosidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07983.10^X8^X8 domain^120-189^E:1.5e-19","sigP:1^26^0.87^YES",".","ENOG410YEGG^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT1G11820","GO:0031225^cellular_component^anchored component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN45364_c2_g3","leaves S. yangii","roots S. yangii",-1.96985254143093,"0.00065684446773078","0.000945735442465385","TRINITY_DN45364_c2_g3_i7","FACR1_ARATH^FACR1_ARATH^Q:751-194,H:307-491^49.2%ID^E:3e-55^RecName: Full=Fatty acyl-CoA reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45364_c2_g3_i7.p1","191-739[-]","FACR3_ARATH^FACR3_ARATH^Q:1-180,H:317-493^47.22%ID^E:8e-54^RecName: Full=Fatty acyl-CoA reductase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03015.16^Sterile^Male sterility protein^80-181^E:3.9e-21",".",".","ENOG410XS7R^fatty-acyl-CoA reductase (alcohol-forming) activity","KEGG:ath:AT4G33790`KO:K13356","GO:0005783^cellular_component^endoplasmic reticulum`GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity`GO:0006629^biological_process^lipid metabolic process`GO:0035336^biological_process^long-chain fatty-acyl-CoA metabolic process`GO:0010345^biological_process^suberin biosynthetic process`GO:0010025^biological_process^wax biosynthetic process","GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity",".","."]
["TRINITY_DN47384_c3_g6","leaves S. yangii","roots S. yangii",-1.97294865727338,"0.000682810377707061","0.000981601033335418","TRINITY_DN47384_c3_g6_i2","MYB4_ORYSJ^MYB4_ORYSJ^Q:342-1,H:1-114^77.19%ID^E:1e-60^RecName: Full=Myb-related protein Myb4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47384_c3_g6_i2.p1","1-342[-]","MYB4_ORYSJ^MYB4_ORYSJ^Q:1-114,H:1-114^77.19%ID^E:7e-61^RecName: Full=Myb-related protein Myb4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^14-61^E:4.6e-16`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^17-75^E:1.4e-12`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^67-111^E:2.9e-16`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^71-113^E:2.7e-07",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:osa:4336407`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN44355_c0_g1","leaves S. yangii","roots S. yangii",-1.98033345881728,"0.000422047384127327","0.000616083128900617","TRINITY_DN44355_c0_g1_i1","SLAH3_ARATH^SLAH3_ARATH^Q:3-1187,H:223-624^69.4%ID^E:1e-170^RecName: Full=S-type anion channel SLAH3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44355_c0_g1_i1.p1","3-1226[+]","SLAH3_ARATH^SLAH3_ARATH^Q:1-396,H:223-625^69.73%ID^E:0^RecName: Full=S-type anion channel SLAH3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03595.14^SLAC1^Voltage-dependent anion channel^36-339^E:3e-53",".",".","ENOG4111I0D^C4-dicarboxylate transporter malic acid transport protein","KEGG:ath:AT5G24030","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0008308^molecular_function^voltage-gated anion channel activity`GO:0006873^biological_process^cellular ion homeostasis","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46605_c0_g1","leaves S. yangii","roots S. yangii",-1.99519264877166,{"v":8952395395.74175,"d":"8.95E+09"},"0.000136427808386893","TRINITY_DN46605_c0_g1_i2","SPL8_ARATH^SPL8_ARATH^Q:677-1222,H:134-311^66.13%ID^E:6e-70^RecName: Full=Squamosa promoter-binding-like protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46605_c0_g1_i2.p1","347-1285[+]","SPL8_ARATH^SPL8_ARATH^Q:1-292,H:1-311^50%ID^E:3e-83^RecName: Full=Squamosa promoter-binding-like protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03110.11^SBP^SBP domain^166-239^E:8.9e-31",".",".","ENOG41120IC^Squamosa promoter-binding-like protein","KEGG:ath:AT1G02065","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0048653^biological_process^anther development`GO:0030154^biological_process^cell differentiation`GO:0009554^biological_process^megasporogenesis`GO:0009556^biological_process^microsporogenesis`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN45368_c6_g2","leaves S. yangii","roots S. yangii",-2.0101118913321,{"v":9824596552.92567,"d":"9.82E+09"},"0.000149275337586864","TRINITY_DN45368_c6_g2_i1","PGIP1_ARATH^PGIP1_ARATH^Q:584-3,H:24-216^51.02%ID^E:1e-59^RecName: Full=Polygalacturonase inhibitor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45368_c6_g2_i1.p1","3-698[-]","PGIP1_ARATH^PGIP1_ARATH^Q:39-232,H:24-216^51.02%ID^E:1e-59^RecName: Full=Polygalacturonase inhibitor 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^42-79^E:7.1e-11`PF13855.3^LRR_8^Leucine rich repeat^133-193^E:1e-07`PF00560.30^LRR_1^Leucine Rich Repeat^158-180^E:0.089",".",".","ENOG410YB0Y^polygalacturonase inhibiting protein","KEGG:ath:AT5G06860","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0005794^cellular_component^Golgi apparatus`GO:0016020^cellular_component^membrane`GO:0009505^cellular_component^plant-type cell wall`GO:0009506^cellular_component^plasmodesma`GO:0090353^molecular_function^polygalacturonase inhibitor activity`GO:0043086^biological_process^negative regulation of catalytic activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43666_c0_g3","leaves S. yangii","roots S. yangii",-2.03963967412287,"0.000276228417909726","0.00040833058702141","TRINITY_DN43666_c0_g3_i1","PER72_ARATH^PER72_ARATH^Q:61-1047,H:5-333^65.65%ID^E:3e-159^RecName: Full=Peroxidase 72;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43666_c0_g3_i1.p1","40-1053[+]","PER72_ARATH^PER72_ARATH^Q:4-336,H:6-333^65.37%ID^E:6e-162^RecName: Full=Peroxidase 72;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^53-300^E:5.1e-75","sigP:1^20^0.812^YES",".","ENOG410YA1B^peroxidase","KEGG:ath:AT5G66390`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0009809^biological_process^lignin biosynthetic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45877_c2_g6","leaves S. yangii","roots S. yangii",-2.05261878352351,0,0,"TRINITY_DN45877_c2_g6_i1","C3H20_ARATH^C3H20_ARATH^Q:3-707,H:94-358^57.41%ID^E:3e-73^RecName: Full=Zinc finger CCCH domain-containing protein 20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45877_c2_g6_i1.p1","3-713[+]","C3H49_ARATH^C3H49_ARATH^Q:1-235,H:95-355^59.55%ID^E:4e-86^RecName: Full=Zinc finger CCCH domain-containing protein 49;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14608.3^zf-CCCH_2^RNA-binding, Nab2-type zinc finger^6-12^E:2.8`PF00642.21^zf-CCCH^Zinc finger C-x8-C-x5-C-x3-H type (and similar)^30-50^E:8.7e-07`PF14608.3^zf-CCCH_2^RNA-binding, Nab2-type zinc finger^65-81^E:0.014",".",".","ENOG410XR0Z^zinc finger CCCH domain-containing protein","KEGG:ath:AT4G29190","GO:0005886^cellular_component^plasma membrane`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN43767_c5_g2","leaves S. yangii","roots S. yangii",-2.08530193127445,{"v":9754612345.15134,"d":"9.75E+09"},"0.000148229943332678","TRINITY_DN43767_c5_g2_i1","PXL2_ARATH^PXL2_ARATH^Q:374-2803,H:28-832^62.79%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43767_c5_g2_i1.p1","308-2803[+]","PXL2_ARATH^PXL2_ARATH^Q:3-832,H:1-832^61.37%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^24-69^E:2.7e-07`PF13516.3^LRR_6^Leucine Rich repeat^193-207^E:2`PF13516.3^LRR_6^Leucine Rich repeat^288-304^E:1.7`PF13855.3^LRR_8^Leucine rich repeat^481-541^E:5.9e-07`PF13855.3^LRR_8^Leucine rich repeat^530-589^E:1.2e-10`PF00560.30^LRR_1^Leucine Rich Repeat^555-575^E:0.46`PF00069.22^Pkinase^Protein kinase domain^700-832^E:1.8e-19`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^700-832^E:1.5e-18","sigP:1^19^0.828^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT4G28650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0030154^biological_process^cell differentiation`GO:0010067^biological_process^procambium histogenesis`GO:0001944^biological_process^vasculature development","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45476_c0_g10","leaves S. yangii","roots S. yangii",-2.09989512836429,"0.00038820770717422","0.000568272317968049","TRINITY_DN45476_c0_g10_i1","RKS1_ARATH^RKS1_ARATH^Q:988-2,H:350-693^50.14%ID^E:2e-96^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase RKS1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45476_c0_g10_i1.p1","2-988[-]","RKS1_ARATH^RKS1_ARATH^Q:1-329,H:350-693^49.57%ID^E:1e-98^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase RKS1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08276.8^PAN_2^PAN-like domain^2-54^E:2.1e-12`PF00069.22^Pkinase^Protein kinase domain^151-324^E:7.1e-38`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^152-326^E:3.4e-37",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G11340","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46826_c0_g1","leaves S. yangii","roots S. yangii",-2.10889990606447,{"v":7706461077.41197,"d":"7.71E+09"},"0.000118050019653745","TRINITY_DN46826_c0_g1_i2","RHD3_ORYSJ^RHD3_ORYSJ^Q:1219-428,H:382-664^49.47%ID^E:2e-66^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`RHD3_ORYSJ^RHD3_ORYSJ^Q:1477-1127,H:224-337^39.2%ID^E:2e-11^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46826_c0_g1_i2.p1","308-1480[-]","RHD3_ORYSJ^RHD3_ORYSJ^Q:88-381,H:382-694^46.67%ID^E:1e-80^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`RHD3_ORYSJ^RHD3_ORYSJ^Q:2-118,H:224-337^39.2%ID^E:5e-12^RecName: Full=Protein ROOT HAIR DEFECTIVE 3 {ECO:0000255|HAMAP-Rule:MF_03109};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF05879.9^RHD3^Root hair defective 3 GTP-binding protein (RHD3)^3-52^E:1e-05`PF05879.9^RHD3^Root hair defective 3 GTP-binding protein (RHD3)^84-355^E:3.1e-53",".",".","ENOG410XPVJ^GTPase activity","KEGG:osa:4326314","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity",".",".","."]
["TRINITY_DN44375_c6_g8","leaves S. yangii","roots S. yangii",-2.12722643010468,0,0,"TRINITY_DN44375_c6_g8_i2","NUG2_ORYSJ^NUG2_ORYSJ^Q:2419-1526,H:1-311^76.53%ID^E:8e-159^RecName: Full=Nuclear/nucleolar GTPase 2 {ECO:0000303|PubMed:21205822};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`NUG2_ORYSJ^NUG2_ORYSJ^Q:1151-309,H:239-521^62.89%ID^E:2e-93^RecName: Full=Nuclear/nucleolar GTPase 2 {ECO:0000303|PubMed:21205822};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44375_c6_g8_i2.p1","1496-2419[-]","NUG2_ORYSJ^NUG2_ORYSJ^Q:1-298,H:1-311^76.53%ID^E:2e-166^RecName: Full=Nuclear/nucleolar GTPase 2 {ECO:0000303|PubMed:21205822};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08153.9^NGP1NT^NGP1NT (NUC091) domain^44-169^E:1.4e-47",".",".","COG1161^Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)","KEGG:osa:4332852`KO:K14537","GO:0005730^cellular_component^nucleolus`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0042254^biological_process^ribosome biogenesis",".",".","."]
["TRINITY_DN41829_c0_g2","leaves S. yangii","roots S. yangii",-2.14157682257807,"0.000138547914205508","0.000208740977060781","TRINITY_DN41829_c0_g2_i1","AKT1_ARATH^AKT1_ARATH^Q:2-217,H:484-555^77.78%ID^E:5e-20^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41829_c0_g2_i1.p1","50-325[+]","AKT1_ARATH^AKT1_ARATH^Q:1-56,H:500-555^76.79%ID^E:2e-22^RecName: Full=Potassium channel AKT1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XPSE^Potassium voltage-gated channel, subfamily H (Eag-related), member","KEGG:ath:AT2G26650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0042802^molecular_function^identical protein binding`GO:0005242^molecular_function^inward rectifier potassium channel activity`GO:0010107^biological_process^potassium ion import`GO:0006813^biological_process^potassium ion transport`GO:0042391^biological_process^regulation of membrane potential`GO:0090333^biological_process^regulation of stomatal closure`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0048767^biological_process^root hair elongation",".",".","."]
["TRINITY_DN45177_c0_g2","leaves S. yangii","roots S. yangii",-2.19649069957389,0,0,"TRINITY_DN45177_c0_g2_i3","ADH1_PETHY^ADH1_PETHY^Q:1576-761,H:76-348^86.45%ID^E:1e-158^RecName: Full=Alcohol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia`ADH1_PETHY^ADH1_PETHY^Q:1911-1693,H:3-75^95.89%ID^E:1e-158^RecName: Full=Alcohol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia`ADH1_PETHY^ADH1_PETHY^Q:426-316,H:345-381^86.49%ID^E:2e-12^RecName: Full=Alcohol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia",".","TRINITY_DN45177_c0_g2_i3.p1","734-1642[-]","ADH1_ORYSJ^ADH1_ORYSJ^Q:23-290,H:74-341^87.69%ID^E:4e-175^RecName: Full=Alcohol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^23-109^E:1e-09`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^154-277^E:1.9e-23",".",".","COG1062^alcohol dehydrogenase","KEGG:osa:4350053`KO:K18857","GO:0005737^cellular_component^cytoplasm`GO:0004022^molecular_function^alcohol dehydrogenase (NAD) activity`GO:0008270^molecular_function^zinc ion binding","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN5518_c0_g1","leaves S. yangii","roots S. yangii",-2.25997747192016,{"v":9896326758.09209,"d":"9.90E+09"},"0.000150347004250305","TRINITY_DN5518_c0_g1_i1","MCM31_MAIZE^MCM31_MAIZE^Q:2679-355,H:1-760^69.58%ID^E:0^RecName: Full=DNA replication licensing factor MCM3 homolog 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN5518_c0_g1_i1.p1","322-2679[-]","MCM31_MAIZE^MCM31_MAIZE^Q:1-775,H:1-760^69.58%ID^E:0^RecName: Full=DNA replication licensing factor MCM3 homolog 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF14551.3^MCM_N^MCM N-terminal domain^13-127^E:7.4e-10`PF00493.20^MCM^MCM2/3/5 family^280-641^E:1.8e-129`PF01078.18^Mg_chelatase^Magnesium chelatase, subunit ChlI^386-453^E:3e-07",".",".","COG1241^dna replication licensing factor","KEGG:zma:100126427`KO:K02541","GO:0042555^cellular_component^MCM complex`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0003678^molecular_function^DNA helicase activity`GO:0007049^biological_process^cell cycle`GO:0006270^biological_process^DNA replication initiation","GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0006260^biological_process^DNA replication",".","."]
["TRINITY_DN46626_c0_g10","leaves S. yangii","roots S. yangii",-2.25997958708037,"0.00247406141790341","0.00341336148123717","TRINITY_DN46626_c0_g10_i1","Y3236_ARATH^Y3236_ARATH^Q:81-401,H:202-307^29.91%ID^E:1e-07^RecName: Full=Ankyrin repeat-containing protein At3g12360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46626_c0_g10_i1.p1","63-419[+]","Y3236_ARATH^Y3236_ARATH^Q:7-113,H:202-307^29.91%ID^E:8e-08^RecName: Full=Ankyrin repeat-containing protein At3g12360;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13637.3^Ank_4^Ankyrin repeats (many copies)^40-92^E:5.5e-05",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT3G12360","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0034613^biological_process^cellular protein localization`GO:0009651^biological_process^response to salt stress",".",".","."]
["TRINITY_DN44908_c3_g5","leaves S. yangii","roots S. yangii",-2.26206190301785,"0.00128561766867961","0.00180993273943585","TRINITY_DN44908_c3_g5_i1","R1B16_SOLDE^R1B16_SOLDE^Q:39-425,H:1133-1264^39.39%ID^E:4e-15^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44908_c3_g5_i1.p1","3-593[+]","R1B16_SOLDE^R1B16_SOLDE^Q:13-141,H:1133-1264^39.39%ID^E:3e-15^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^156-194^E:1.1e-05",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46991_c3_g1","leaves S. yangii","roots S. yangii",-2.28809957951717,"0.000204963170568188","0.000305902808717172","TRINITY_DN46991_c3_g1_i1","C7A29_PANGI^C7A29_PANGI^Q:584-33,H:194-377^57.61%ID^E:8e-69^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax",".","TRINITY_DN46991_c3_g1_i1.p1","21-584[-]","C7A29_PANGI^C7A29_PANGI^Q:1-184,H:194-377^57.61%ID^E:6e-69^RecName: Full=Cytochrome P450 CYP72A219;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax","PF00067.19^p450^Cytochrome P450^2-182^E:2.6e-25",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46417_c1_g5","leaves S. yangii","roots S. yangii",-2.30241519256955,"0.00394374831069452","0.0053579638157855","TRINITY_DN46417_c1_g5_i1","THCAS_CANSA^THCAS_CANSA^Q:2-349,H:117-232^70.69%ID^E:1e-43^RecName: Full=Tetrahydrocannabinolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis",".","TRINITY_DN46417_c1_g5_i1.p1","2-349[+]","THCAS_CANSA^THCAS_CANSA^Q:1-116,H:117-232^70.69%ID^E:5e-44^RecName: Full=Tetrahydrocannabinolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis","PF01565.20^FAD_binding_4^FAD binding domain^10-101^E:4.8e-17",".",".",".",".","GO:0048046^cellular_component^apoplast`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46484_c1_g4","leaves S. yangii","roots S. yangii",-2.30769848845031,0,0,"TRINITY_DN46484_c1_g4_i5","LHW_ARATH^LHW_ARATH^Q:862-323,H:451-618^49.44%ID^E:2e-46^RecName: Full=Transcription factor LHW;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LHW_ARATH^LHW_ARATH^Q:2431-1901,H:3-158^31.84%ID^E:4e-18^RecName: Full=Transcription factor LHW;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46484_c1_g4_i5.p1","287-2440[-]","LHW_ARATH^LHW_ARATH^Q:482-706,H:411-618^44%ID^E:5e-49^RecName: Full=Transcription factor LHW;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LHW_ARATH^LHW_ARATH^Q:3-180,H:2-158^31.67%ID^E:2e-18^RecName: Full=Transcription factor LHW;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14215.3^bHLH-MYC_N^bHLH-MYC and R2R3-MYB transcription factors N-terminal^7-182^E:1.6e-29",".",".","ENOG4111M9E^expressed protein","KEGG:ath:AT2G27230","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010078^biological_process^maintenance of root meristem identity`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0048364^biological_process^root development`GO:0010479^biological_process^stele development`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN43793_c0_g1","leaves S. yangii","roots S. yangii",-2.32986365997876,"0.00026272927479841","0.000389132075090941","TRINITY_DN43793_c0_g1_i2","DTX21_ARATH^DTX21_ARATH^Q:328-861,H:301-478^57.3%ID^E:4e-75^RecName: Full=Protein DETOXIFICATION 21 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DTX21_ARATH^DTX21_ARATH^Q:3-260,H:215-300^56.98%ID^E:4e-75^RecName: Full=Protein DETOXIFICATION 21 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43793_c0_g1_i2.p1","229-876[+]","DTX21_ARATH^DTX21_ARATH^Q:34-211,H:301-478^57.3%ID^E:5e-63^RecName: Full=Protein DETOXIFICATION 21 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^34-162^E:2e-21",".",".","COG0534^Mate efflux family protein",".","GO:0016021^cellular_component^integral component of membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46605_c1_g1","leaves S. yangii","roots S. yangii",-2.35256904225961,0,0,"TRINITY_DN46605_c1_g1_i3","PIP1_SOLLC^PIP1_SOLLC^Q:396-1,H:109-240^91.67%ID^E:5e-76^RecName: Full=Probable aquaporin PIP-type pTOM75;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN46605_c1_g1_i3.p1","1-396[-]","PIP1_SOLLC^PIP1_SOLLC^Q:1-132,H:109-240^91.67%ID^E:2e-80^RecName: Full=Probable aquaporin PIP-type pTOM75;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00230.17^MIP^Major intrinsic protein^2-132^E:5.2e-47",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:sly:544086`KO:K09872","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0015254^molecular_function^glycerol channel activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0034220^biological_process^ion transmembrane transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN43534_c2_g4","leaves S. yangii","roots S. yangii",-2.35718010955876,"0.000142855576089953","0.000215063199613285","TRINITY_DN43534_c2_g4_i2","SOT6_ARATH^SOT6_ARATH^Q:1063-404,H:34-256^38.12%ID^E:6e-54^RecName: Full=Cytosolic sulfotransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SOT6_ARATH^SOT6_ARATH^Q:410-198,H:258-329^56.94%ID^E:6e-54^RecName: Full=Cytosolic sulfotransferase 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43534_c2_g4_i2.p1","350-1138[-]","SOT13_ARATH^SOT13_ARATH^Q:29-251,H:39-262^37.5%ID^E:2e-51^RecName: Full=Cytosolic sulfotransferase 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00685.24^Sulfotransfer_1^Sulfotransferase domain^56-243^E:1e-46`PF13469.3^Sulfotransfer_3^Sulfotransferase family^124-240^E:2.5e-07",".",".","ENOG4111H56^Sulfotransferase","KEGG:ath:AT2G03770","GO:0005737^cellular_component^cytoplasm`GO:1990135^molecular_function^flavonoid sulfotransferase activity`GO:0008146^molecular_function^sulfotransferase activity`GO:0009812^biological_process^flavonoid metabolic process","GO:0008146^molecular_function^sulfotransferase activity",".","."]
["TRINITY_DN47342_c0_g1","leaves S. yangii","roots S. yangii",-2.36591701178361,0,0,"TRINITY_DN47342_c0_g1_i2","HIP26_ARATH^HIP26_ARATH^Q:596-150,H:1-153^50.98%ID^E:7e-41^RecName: Full=Heavy metal-associated isoprenylated plant protein 26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47342_c0_g1_i2.p1","147-596[-]","HIP26_ARATH^HIP26_ARATH^Q:1-149,H:1-153^50.98%ID^E:5e-46^RecName: Full=Heavy metal-associated isoprenylated plant protein 26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00403.23^HMA^Heavy-metal-associated domain^30-86^E:8.6e-12",".",".","COG2608^heavy metal transport detoxification protein","KEGG:ath:AT4G38580","GO:0005737^cellular_component^cytoplasm`GO:0031965^cellular_component^nuclear membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0046914^molecular_function^transition metal ion binding`GO:0046916^biological_process^cellular transition metal ion homeostasis`GO:0010286^biological_process^heat acclimation`GO:0030001^biological_process^metal ion transport","GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport",".","."]
["TRINITY_DN44780_c8_g1","leaves S. yangii","roots S. yangii",-2.39304981301078,0,0,"TRINITY_DN44780_c8_g1_i1","UXS2_ARATH^UXS2_ARATH^Q:3153-2395,H:1-256^74.14%ID^E:1e-118^RecName: Full=UDP-glucuronic acid decarboxylase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UXS2_ARATH^UXS2_ARATH^Q:699-394,H:330-431^83.33%ID^E:3e-50^RecName: Full=UDP-glucuronic acid decarboxylase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UXS2_ARATH^UXS2_ARATH^Q:1379-1122,H:280-337^65.12%ID^E:4e-22^RecName: Full=UDP-glucuronic acid decarboxylase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`UXS2_ARATH^UXS2_ARATH^Q:1797-1678,H:249-289^73.17%ID^E:2e-09^RecName: Full=UDP-glucuronic acid decarboxylase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44780_c8_g1_i1.p3","373-759[-]","UXS4_ARATH^UXS4_ARATH^Q:18-123,H:329-434^83.96%ID^E:5e-59^RecName: Full=UDP-glucuronic acid decarboxylase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^57-108^E:1.3e-06",".",".","COG0451^Nad-dependent epimerase dehydratase",".","GO:0032580^cellular_component^Golgi cisterna membrane`GO:0016021^cellular_component^integral component of membrane`GO:0048040^molecular_function^UDP-glucuronate decarboxylase activity`GO:0033320^biological_process^UDP-D-xylose biosynthetic process",".",".","."]
["TRINITY_DN29030_c0_g1","leaves S. yangii","roots S. yangii",-2.42744936277323,0,0,"TRINITY_DN29030_c0_g1_i1","METK2_CATRO^METK2_CATRO^Q:1382-213,H:1-390^95.64%ID^E:0^RecName: Full=S-adenosylmethionine synthase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus",".","TRINITY_DN29030_c0_g1_i1.p1","198-1382[-]","METK2_CATRO^METK2_CATRO^Q:1-390,H:1-390^95.64%ID^E:0^RecName: Full=S-adenosylmethionine synthase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF00438.17^S-AdoMet_synt_N^S-adenosylmethionine synthetase, N-terminal domain^4-101^E:2.8e-42`PF02772.13^S-AdoMet_synt_M^S-adenosylmethionine synthetase, central domain^117-238^E:4.1e-46`PF02773.13^S-AdoMet_synt_C^S-adenosylmethionine synthetase, C-terminal domain^240-381^E:2.1e-62",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0004478^molecular_function^methionine adenosyltransferase activity`GO:0006730^biological_process^one-carbon metabolic process`GO:0006556^biological_process^S-adenosylmethionine biosynthetic process","GO:0004478^molecular_function^methionine adenosyltransferase activity`GO:0006556^biological_process^S-adenosylmethionine biosynthetic process",".","."]
["TRINITY_DN39808_c1_g1","leaves S. yangii","roots S. yangii",-2.43915093512593,{"v":908266625.24553,"d":"9.08E+08"},"0.00013834583167736","TRINITY_DN39808_c1_g1_i1","U89B2_STERE^U89B2_STERE^Q:1489-92,H:10-467^56.44%ID^E:1e-158^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia",".","TRINITY_DN39808_c1_g1_i1.p1","86-1543[-]","U89B2_STERE^U89B2_STERE^Q:19-484,H:10-467^56.65%ID^E:3e-179^RecName: Full=UDP-glycosyltransferase 89B2 {ECO:0000303|PubMed:15610349};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Eupatorieae; Stevia","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^286-462^E:1.2e-18",".",".",".",".","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45635_c5_g3","leaves S. yangii","roots S. yangii",-2.50768139873651,0,0,"TRINITY_DN45635_c5_g3_i2","PATL5_ARATH^PATL5_ARATH^Q:1134-493,H:493-664^48.39%ID^E:3e-55^RecName: Full=Patellin-5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45635_c5_g3_i2.p1","484-918[-]","PATL1_ARATH^PATL1_ARATH^Q:13-141,H:448-573^60.47%ID^E:7e-47^RecName: Full=Patellin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XRSQ^Transfer protein","KEGG:ath:AT1G72150","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0008289^molecular_function^lipid binding`GO:0002020^molecular_function^protease binding`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0009860^biological_process^pollen tube growth`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN46568_c0_g1","leaves S. yangii","roots S. yangii",-2.52228210394044,0,0,"TRINITY_DN46568_c0_g1_i4","CADH1_OCIBA^CADH1_OCIBA^Q:1566-496,H:1-357^92.72%ID^E:0^RecName: Full=Cinnamyl alcohol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum",".","TRINITY_DN46568_c0_g1_i4.p1","493-1566[-]","CADH1_OCIBA^CADH1_OCIBA^Q:1-357,H:1-357^92.72%ID^E:0^RecName: Full=Cinnamyl alcohol dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^35-149^E:7.3e-27`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^191-313^E:8.4e-23",".",".",".",".","GO:0045551^molecular_function^cinnamyl-alcohol dehydrogenase activity`GO:0052747^molecular_function^sinapyl alcohol dehydrogenase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009699^biological_process^phenylpropanoid biosynthetic process","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46856_c2_g1","leaves S. yangii","roots S. yangii",-2.5393156064455,0,0,"TRINITY_DN46856_c2_g1_i3","ADT3_ARATH^ADT3_ARATH^Q:1523-399,H:1-370^77.93%ID^E:0^RecName: Full=ADP,ATP carrier protein 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46856_c2_g1_i3.p1","366-1523[-]","ADT3_ARATH^ADT3_ARATH^Q:1-384,H:1-379^78.44%ID^E:0^RecName: Full=ADP,ATP carrier protein 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00153.24^Mito_carr^Mitochondrial carrier protein^83-179^E:8.6e-23`PF00153.24^Mito_carr^Mitochondrial carrier protein^186-279^E:1.1e-23`PF00153.24^Mito_carr^Mitochondrial carrier protein^288-375^E:3.1e-16",".",".","ENOG410XNW0^transmembrane transport","KEGG:ath:AT4G28390`KO:K05863","GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion`GO:0005471^molecular_function^ATP:ADP antiporter activity`GO:0003735^molecular_function^structural constituent of ribosome`GO:0015866^biological_process^ADP transport`GO:0015867^biological_process^ATP transport`GO:0015865^biological_process^purine nucleotide transport`GO:0006412^biological_process^translation",".",".","."]
["TRINITY_DN46376_c2_g8","leaves S. yangii","roots S. yangii",-2.58965293645482,"0.00341955067306304","0.00466625217177914","TRINITY_DN46376_c2_g8_i1","LOR15_ARATH^LOR15_ARATH^Q:800-249,H:27-210^44.02%ID^E:6e-58^RecName: Full=Protein LURP-one-related 15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46376_c2_g8_i1.p1","204-836[-]","LOR15_ARATH^LOR15_ARATH^Q:13-196,H:27-210^44.02%ID^E:3e-59^RecName: Full=Protein LURP-one-related 15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04525.9^LOR^LURP-one-related^13-192^E:6e-46",".",".","ENOG4111GT4^Pfam:DUF567","KEGG:ath:AT5G01750","GO:0009507^cellular_component^chloroplast",".",".","."]
["TRINITY_DN46118_c3_g3","leaves S. yangii","roots S. yangii",-2.60489919201596,0,0,"TRINITY_DN46118_c3_g3_i1","FBW2_ARATH^FBW2_ARATH^Q:1293-475,H:1-278^58.63%ID^E:8e-93^RecName: Full=F-box protein FBW2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46118_c3_g3_i1.p1","313-1293[-]","FBW2_ARATH^FBW2_ARATH^Q:1-326,H:1-317^52.71%ID^E:3e-103^RecName: Full=F-box protein FBW2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YQ9V^NA","KEGG:ath:AT4G08980","GO:0005634^cellular_component^nucleus`GO:0010629^biological_process^negative regulation of gene expression`GO:0010608^biological_process^posttranscriptional regulation of gene expression`GO:0016567^biological_process^protein ubiquitination`GO:0009737^biological_process^response to abscisic acid",".",".","."]
["TRINITY_DN47409_c1_g1","leaves S. yangii","roots S. yangii",-2.61579849684866,{"v":8652413728.99096,"d":"8.65E+09"},"0.000131992568806004","TRINITY_DN47409_c1_g1_i4","NAC7_ARATH^NAC7_ARATH^Q:461-1375,H:1-345^58.09%ID^E:1e-117^RecName: Full=NAC domain-containing protein 7 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47409_c1_g1_i4.p1","461-1573[+]","NAC7_ARATH^NAC7_ARATH^Q:1-305,H:1-345^59.54%ID^E:6e-135^RecName: Full=NAC domain-containing protein 7 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^8-135^E:4.7e-29",".",".","ENOG4111EYD^Nac domain-containing protein","KEGG:ath:AT1G12260","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071555^biological_process^cell wall organization`GO:0007275^biological_process^multicellular organism development`GO:1901348^biological_process^positive regulation of secondary cell wall biogenesis`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated`GO:0048759^biological_process^xylem vessel member cell differentiation","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46749_c3_g2","leaves S. yangii","roots S. yangii",-2.62849287313626,0,0,"TRINITY_DN46749_c3_g2_i9","HIBC8_ARATH^HIBC8_ARATH^Q:987-349,H:1-210^74.18%ID^E:2e-91^RecName: Full=3-hydroxyisobutyryl-CoA hydrolase-like protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46749_c3_g2_i9.p1","313-987[-]","HIBC8_ARATH^HIBC8_ARATH^Q:1-213,H:1-210^74.18%ID^E:7e-103^RecName: Full=3-hydroxyisobutyryl-CoA hydrolase-like protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00378.17^ECH_1^Enoyl-CoA hydratase/isomerase^20-193^E:3.5e-24`PF16113.2^ECH_2^Enoyl-CoA hydratase/isomerase^21-194^E:8.6e-66",".",".","COG1024^Enoyl-CoA hydratase","KEGG:ath:AT1G06550`KO:K05605","GO:0016836^molecular_function^hydro-lyase activity`GO:0016787^molecular_function^hydrolase activity`GO:0080167^biological_process^response to karrikin","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process`GO:0016836^molecular_function^hydro-lyase activity",".","."]
["TRINITY_DN46162_c0_g6","leaves S. yangii","roots S. yangii",-2.6293815186258,0,0,"TRINITY_DN46162_c0_g6_i1","RP8L2_ARATH^RP8L2_ARATH^Q:3-485,H:444-607^29.24%ID^E:4e-15^RecName: Full=Probable disease resistance RPP8-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46162_c0_g6_i1.p1","3-506[+]","RP8L2_ARATH^RP8L2_ARATH^Q:1-161,H:444-607^29.24%ID^E:4e-15^RecName: Full=Probable disease resistance RPP8-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G53350","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN43919_c4_g8","leaves S. yangii","roots S. yangii",-2.65996653782862,"0.000307154628589139","0.000452660318226146","TRINITY_DN43919_c4_g8_i1","Y1680_ARATH^Y1680_ARATH^Q:1362-271,H:297-664^70.32%ID^E:1e-177^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g68400;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1680_ARATH^Y1680_ARATH^Q:2175-1546,H:31-237^60%ID^E:1e-46^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g68400;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43919_c4_g8_i1.p1","256-2286[-]","Y1680_ARATH^Y1680_ARATH^Q:38-672,H:31-664^63.73%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g68400;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^37-74^E:2.9e-09`PF00069.22^Pkinase^Protein kinase domain^372-571^E:3.2e-35`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^372-641^E:3.5e-33","sigP:1^33^0.834^YES",".","ENOG4111API^Leucine-rich repeat receptor-like protein kinase","KEGG:ath:AT1G68400","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45941_c3_g6","leaves S. yangii","roots S. yangii",-2.70178613867205,0,0,"TRINITY_DN45941_c3_g6_i1","PIP22_ARATH^PIP22_ARATH^Q:358-2,H:80-198^92.44%ID^E:9e-74^RecName: Full=Aquaporin PIP2-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45941_c3_g6_i1.p2","2-358[-]","PIP22_ARATH^PIP22_ARATH^Q:1-119,H:80-198^92.44%ID^E:8e-74^RecName: Full=Aquaporin PIP2-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^2-118^E:3.3e-45",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT2G37170`KO:K09872","GO:0009507^cellular_component^chloroplast`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0015254^molecular_function^glycerol channel activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0034220^biological_process^ion transmembrane transport`GO:0009737^biological_process^response to abscisic acid`GO:0009414^biological_process^response to water deprivation`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45824_c0_g10","leaves S. yangii","roots S. yangii",-2.70949582073049,0,0,"TRINITY_DN45824_c0_g10_i2","COMT1_OCIBA^COMT1_OCIBA^Q:1774-2463,H:132-361^91.74%ID^E:2e-138^RecName: Full=Caffeic acid 3-O-methyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum`COMT1_OCIBA^COMT1_OCIBA^Q:357-779,H:1-138^86.52%ID^E:2e-62^RecName: Full=Caffeic acid 3-O-methyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum",".","TRINITY_DN45824_c0_g10_i2.p1","1852-2466[+]","COMT1_OCIBA^COMT1_OCIBA^Q:1-204,H:158-361^95.1%ID^E:2e-144^RecName: Full=Caffeic acid 3-O-methyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum","PF00891.15^Methyltransf_2^O-methyltransferase^1-188^E:3.8e-75",".",".",".",".","GO:0047763^molecular_function^caffeate O-methyltransferase activity`GO:0009809^biological_process^lignin biosynthetic process","GO:0008171^molecular_function^O-methyltransferase activity",".","."]
["TRINITY_DN35806_c0_g1","leaves S. yangii","roots S. yangii",-2.74614602653565,"0.000319100463536325","0.000469658391467223","TRINITY_DN35806_c0_g1_i1","GL34_ARATH^GL34_ARATH^Q:88-585,H:18-183^61.68%ID^E:5e-60^RecName: Full=Germin-like protein subfamily 3 member 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35806_c0_g1_i1.p1","1-660[+]","GL34_ARATH^GL34_ARATH^Q:20-195,H:9-183^59.32%ID^E:1e-68^RecName: Full=Germin-like protein subfamily 3 member 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00190.19^Cupin_1^Cupin^82-201^E:3.1e-31`PF07883.8^Cupin_2^Cupin domain^109-178^E:1.1e-07","sigP:1^32^0.744^YES",".","ENOG410YHG8^germin-like protein","KEGG:ath:AT5G61750","GO:0048046^cellular_component^apoplast`GO:0030145^molecular_function^manganese ion binding`GO:0045735^molecular_function^nutrient reservoir activity","GO:0045735^molecular_function^nutrient reservoir activity",".","."]
["TRINITY_DN43821_c4_g1","leaves S. yangii","roots S. yangii",-2.75196446124666,0,0,"TRINITY_DN43821_c4_g1_i7","ARAE1_ARATH^ARAE1_ARATH^Q:1016-2245,H:1-410^86.1%ID^E:0^RecName: Full=UDP-arabinose 4-epimerase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43821_c4_g1_i7.p1","1016-2269[+]","ARAE1_ARATH^ARAE1_ARATH^Q:1-410,H:1-410^86.1%ID^E:0^RecName: Full=UDP-arabinose 4-epimerase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04321.14^RmlD_sub_bind^RmlD substrate binding domain^72-251^E:1.2e-10`PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^73-334^E:2.9e-50`PF02719.12^Polysacc_synt_2^Polysaccharide biosynthesis protein^73-253^E:4.3e-13`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^74-391^E:2e-54`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^74-236^E:7.1e-13`PF13460.3^NAD_binding_10^NAD(P)H-binding^77-260^E:8.7e-08`PF07993.9^NAD_binding_4^Male sterility protein^136-258^E:2.7e-05",".",".","COG1087^udp-glucose 4-epimerase","KEGG:ath:AT1G30620`KO:K12448","GO:0005794^cellular_component^Golgi apparatus`GO:0032580^cellular_component^Golgi cisterna membrane`GO:0016021^cellular_component^integral component of membrane`GO:0050373^molecular_function^UDP-arabinose 4-epimerase activity`GO:0003978^molecular_function^UDP-glucose 4-epimerase activity`GO:0019567^biological_process^arabinose biosynthetic process`GO:0045227^biological_process^capsule polysaccharide biosynthetic process`GO:0006012^biological_process^galactose metabolic process`GO:0009832^biological_process^plant-type cell wall biogenesis`GO:0033358^biological_process^UDP-L-arabinose biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46292_c0_g3","leaves S. yangii","roots S. yangii",-2.77196539338003,0,0,"TRINITY_DN46292_c0_g3_i1","R1A6_SOLDE^R1A6_SOLDE^Q:948-1,H:514-825^37.11%ID^E:6e-54^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46292_c0_g3_i1.p1","1-981[-]","R1A6_SOLDE^R1A6_SOLDE^Q:12-327,H:514-825^37.11%ID^E:6e-54^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^35-309^E:1.9e-71",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45124_c4_g5","leaves S. yangii","roots S. yangii",-2.78884099749105,0,0,"TRINITY_DN45124_c4_g5_i2","U496A_ARATH^U496A_ARATH^Q:1329-220,H:1-369^67.02%ID^E:2e-153^RecName: Full=UPF0496 protein At4g34320;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45124_c4_g5_i2.p1","217-1329[-]","U496A_ARATH^U496A_ARATH^Q:1-370,H:1-369^67.02%ID^E:7e-169^RecName: Full=UPF0496 protein At4g34320;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05633.8^DUF793^Protein of unknown function (DUF793)^26-148^E:2.4e-07`PF05055.9^DUF677^Protein of unknown function (DUF677)^41-364^E:6.9e-125",".",".","ENOG4111FCE^UPF0496 protein","KEGG:ath:AT4G34320","GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN22012_c0_g2","leaves S. yangii","roots S. yangii",-2.82669414650054,"0.000546960343567702","0.000792524063635973","TRINITY_DN22012_c0_g2_i1","CHIT3_VITVI^CHIT3_VITVI^Q:621-94,H:113-290^65.73%ID^E:5e-69^RecName: Full=Acidic endochitinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN22012_c0_g2_i1.p1","58-621[-]","CHIA_TOBAC^CHIA_TOBAC^Q:1-187,H:110-291^63.64%ID^E:2e-78^RecName: Full=Acidic endochitinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00704.25^Glyco_hydro_18^Glycosyl hydrolases family 18^4-174^E:3.8e-13",".",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0000272^biological_process^polysaccharide catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45116_c1_g1","leaves S. yangii","roots S. yangii",-2.87116925843511,0,0,"TRINITY_DN45116_c1_g1_i2","DNJH2_ALLPO^DNJH2_ALLPO^Q:1067-126,H:1-314^86.94%ID^E:1e-142^RecName: Full=DnaJ protein homolog 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Amaryllidaceae; Allioideae; Allieae; Allium",".","TRINITY_DN45116_c1_g1_i2.p1","69-1067[-]","DNJH_ATRNU^DNJH_ATRNU^Q:1-314,H:1-314^87.9%ID^E:1e-180^RecName: Full=DnaJ protein homolog ANJ1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Chenopodioideae; Atripliceae; Atriplex","PF00226.28^DnaJ^DnaJ domain^13-71^E:5.4e-22`PF01556.15^DnaJ_C^DnaJ C terminal domain^122-312^E:1.1e-27`PF00684.16^DnaJ_CXXCXGXG^DnaJ central domain^148-214^E:3.1e-15",".",".",".",".","GO:0016020^cellular_component^membrane`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0006457^biological_process^protein folding`GO:0009408^biological_process^response to heat","GO:0031072^molecular_function^heat shock protein binding`GO:0051082^molecular_function^unfolded protein binding",".","."]
["TRINITY_DN40360_c0_g1","leaves S. yangii","roots S. yangii",-2.88998673901615,"0.000181927920227136","0.000272398012410966","TRINITY_DN40360_c0_g1_i4","TPT_SOLTU^TPT_SOLTU^Q:1213-407,H:142-410^85.13%ID^E:2e-139^RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN40360_c0_g1_i4.p1","383-1069[-]","TPT_SOLTU^TPT_SOLTU^Q:2-221,H:191-410^86.82%ID^E:7e-136^RecName: Full=Triose phosphate/phosphate translocator, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF03151.13^TPT^Triose-phosphate Transporter family^2-209^E:8.3e-80`PF00892.17^EamA^EamA-like transporter family^65-209^E:1.2e-06",".",".","ENOG410XP1S^solute carrier family 35 member","KEGG:sot:102585108`KO:K15283","GO:0031969^cellular_component^chloroplast membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44773_c3_g6","leaves S. yangii","roots S. yangii",-2.89147641469652,0,0,"TRINITY_DN44773_c3_g6_i6","HAK26_ORYSJ^HAK26_ORYSJ^Q:2575-1022,H:224-739^56.56%ID^E:0^RecName: Full=Potassium transporter 26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44773_c3_g6_i6.p3","204-650[+]","UBC4_SOLLC^UBC4_SOLLC^Q:1-148,H:1-148^97.97%ID^E:6e-105^RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00179.23^UQ_con^Ubiquitin-conjugating enzyme^5-141^E:2.9e-54",".",".","COG5078^ubiquitin-conjugating enzyme","KEGG:sly:100301932`KEGG:sly:101249087`KO:K06689","GO:0005524^molecular_function^ATP binding`GO:0016740^molecular_function^transferase activity`GO:0016567^biological_process^protein ubiquitination",".",".","."]
["TRINITY_DN44649_c2_g2","leaves S. yangii","roots S. yangii",-2.91015379984604,0,0,"TRINITY_DN44649_c2_g2_i1","ALFC3_ARATH^ALFC3_ARATH^Q:1128-376,H:180-391^77.29%ID^E:1e-175^RecName: Full=Probable fructose-bisphosphate aldolase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALFC3_ARATH^ALFC3_ARATH^Q:1594-1214,H:53-179^93.7%ID^E:1e-175^RecName: Full=Probable fructose-bisphosphate aldolase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44649_c2_g2_i1.p1","373-762[-]","ALFC3_ARATH^ALFC3_ARATH^Q:1-129,H:263-391^89.92%ID^E:2e-80^RecName: Full=Probable fructose-bisphosphate aldolase 3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00274.16^Glycolytic^Fructose-bisphosphate aldolase class-I^1-129^E:1.6e-52",".",".","COG3588^fructose-bisphosphate aldolase","KEGG:ath:AT2G01140`KO:K01623","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009534^cellular_component^chloroplast thylakoid`GO:0005739^cellular_component^mitochondrion`GO:0009536^cellular_component^plastid`GO:0010287^cellular_component^plastoglobule`GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process`GO:0046686^biological_process^response to cadmium ion`GO:0006979^biological_process^response to oxidative stress","GO:0004332^molecular_function^fructose-bisphosphate aldolase activity`GO:0006096^biological_process^glycolytic process",".","."]
["TRINITY_DN45294_c6_g2","leaves S. yangii","roots S. yangii",-2.93542230496597,"0.000225142996734912","0.000334925230946019","TRINITY_DN45294_c6_g2_i1","IF4A6_TOBAC^IF4A6_TOBAC^Q:582-187,H:122-253^96.21%ID^E:4e-87^RecName: Full=Eukaryotic initiation factor 4A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45294_c6_g2_i1.p1","181-582[-]","IF4A6_TOBAC^IF4A6_TOBAC^Q:1-132,H:122-253^96.21%ID^E:4e-88^RecName: Full=Eukaryotic initiation factor 4A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00271.28^Helicase_C^Helicase conserved C-terminal domain^1-94^E:1e-27",".",".",".",".","GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0003743^molecular_function^translation initiation factor activity",".",".","."]
["TRINITY_DN43961_c1_g1","leaves S. yangii","roots S. yangii",-3.00156069881113,"0.000944354577750592","0.00134335803668682","TRINITY_DN43961_c1_g1_i2","TBL29_ARATH^TBL29_ARATH^Q:1-609,H:285-487^77.83%ID^E:2e-117^RecName: Full=Protein ESKIMO 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43961_c1_g1_i2.p1","1-612[+]","TBL29_ARATH^TBL29_ARATH^Q:1-203,H:285-487^77.83%ID^E:1e-118^RecName: Full=Protein ESKIMO 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^4-197^E:6e-58",".",".","ENOG410YA1R^expressed protein","KEGG:ath:AT3G55990","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:1990538^molecular_function^xylan O-acetyltransferase activity`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0009409^biological_process^response to cold`GO:0050826^biological_process^response to freezing`GO:0045492^biological_process^xylan biosynthetic process",".",".","."]
["TRINITY_DN44309_c1_g2","leaves S. yangii","roots S. yangii",-3.03711141227593,0,0,"TRINITY_DN44309_c1_g2_i6","XB31_ARATH^XB31_ARATH^Q:1437-424,H:105-455^71.67%ID^E:5e-159^RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`XB31_ARATH^XB31_ARATH^Q:1838-1512,H:1-109^59.63%ID^E:5e-159^RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44309_c1_g2_i6.p1","409-1431[-]","XB31_ARATH^XB31_ARATH^Q:1-336,H:107-455^71.79%ID^E:0^RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^6-77^E:2.6e-10`PF00023.27^Ank^Ankyrin repeat^6-28^E:0.013`PF00023.27^Ank^Ankyrin repeat^52-80^E:0.00045`PF13606.3^Ank_3^Ankyrin repeat^52-76^E:0.0025`PF13637.3^Ank_4^Ankyrin repeats (many copies)^54-109^E:8.4e-07`PF13857.3^Ank_5^Ankyrin repeats (many copies)^89-129^E:1.8e-07`PF00023.27^Ank^Ankyrin repeat^89-119^E:1.6e-05`PF13606.3^Ank_3^Ankyrin repeat^89-114^E:0.00061",".",".","COG0666^Ankyrin Repeat",".","GO:0016874^molecular_function^ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN43496_c2_g1","leaves S. yangii","roots S. yangii",-3.12136379276239,0,0,"TRINITY_DN43496_c2_g1_i11","ASNS_TRIVS^ASNS_TRIVS^Q:2628-622,H:1-585^76.68%ID^E:0^RecName: Full=Asparagine synthetase [glutamine-hydrolyzing];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Orobanchaceae; Pedicularideae; Castillejinae; Triphysaria",".","TRINITY_DN43496_c2_g1_i11.p1","1171-2628[-]","ASNS_TRIVS^ASNS_TRIVS^Q:1-480,H:1-480^88.75%ID^E:0^RecName: Full=Asparagine synthetase [glutamine-hydrolyzing];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Orobanchaceae; Pedicularideae; Castillejinae; Triphysaria","PF13522.3^GATase_6^Glutamine amidotransferase domain^33-159^E:3.3e-31`PF13537.3^GATase_7^Glutamine amidotransferase domain^48-165^E:8.3e-38`PF12481.5^DUF3700^Aluminium induced protein^112-201^E:1.5e-11`PF00733.18^Asn_synthase^Asparagine synthase^210-361^E:3.9e-57`PF00733.18^Asn_synthase^Asparagine synthase^361-473^E:3e-33",".",".",".",".","GO:0004066^molecular_function^asparagine synthase (glutamine-hydrolyzing) activity`GO:0005524^molecular_function^ATP binding`GO:0006541^biological_process^glutamine metabolic process`GO:0070981^biological_process^L-asparagine biosynthetic process","GO:0004066^molecular_function^asparagine synthase (glutamine-hydrolyzing) activity`GO:0006529^biological_process^asparagine biosynthetic process",".","."]
["TRINITY_DN102135_c0_g1","leaves S. yangii","roots S. yangii",-3.14188800786935,0,0,"TRINITY_DN102135_c0_g1_i1","2MMP_ARATH^2MMP_ARATH^Q:1409-477,H:41-352^59.37%ID^E:4e-115^RecName: Full=Metalloendoproteinase 2-MMP {ECO:0000303|PubMed:10574937};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN102135_c0_g1_i1.p1","429-1544[-]","2MMP_ARATH^2MMP_ARATH^Q:10-368,H:4-367^55.04%ID^E:6e-132^RecName: Full=Metalloendoproteinase 2-MMP {ECO:0000303|PubMed:10574937};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01471.15^PG_binding_1^Putative peptidoglycan binding domain^64-117^E:2.6e-10`PF00413.21^Peptidase_M10^Matrixin^170-326^E:3.5e-49","sigP:1^26^0.669^YES",".","ENOG410XQ5D^matrix metallopeptidase","KEGG:ath:AT1G70170","GO:0031225^cellular_component^anchored component of membrane`GO:0031012^cellular_component^extracellular matrix`GO:0005886^cellular_component^plasma membrane`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008270^molecular_function^zinc ion binding`GO:0080186^biological_process^developmental vegetative growth`GO:0007275^biological_process^multicellular organism development`GO:1900056^biological_process^negative regulation of leaf senescence`GO:2000028^biological_process^regulation of photoperiodism, flowering`GO:0046686^biological_process^response to cadmium ion`GO:0009753^biological_process^response to jasmonic acid`GO:0009651^biological_process^response to salt stress","GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008270^molecular_function^zinc ion binding`GO:0006508^biological_process^proteolysis`GO:0031012^cellular_component^extracellular matrix",".","."]
["TRINITY_DN91654_c0_g1","leaves S. yangii","roots S. yangii",-3.20682187605483,"0.00539354433757167","0.00724799939468266","TRINITY_DN91654_c0_g1_i1","OFP8_ARATH^OFP8_ARATH^Q:268-77,H:157-220^70.31%ID^E:8e-23^RecName: Full=Transcription repressor OFP8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN91654_c0_g1_i1.p1","59-691[-]","OFP8_ARATH^OFP8_ARATH^Q:3-205,H:2-220^35.78%ID^E:5e-26^RecName: Full=Transcription repressor OFP8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04844.10^Ovate^Transcriptional repressor, ovate^147-203^E:2.6e-24",".",".","ENOG410YX1Q^Pfam:DUF623","KEGG:ath:AT5G19650","GO:0005634^cellular_component^nucleus`GO:0045892^biological_process^negative regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN39347_c0_g1","leaves S. yangii","roots S. yangii",-3.25436406694011,0,0,"TRINITY_DN39347_c0_g1_i1","CLDS_TOBAC^CLDS_TOBAC^Q:2361-502,H:98-736^51.48%ID^E:0^RecName: Full=Copal-8-ol diphosphate hydratase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`CLDS_TOBAC^CLDS_TOBAC^Q:376-194,H:741-802^51.61%ID^E:9e-09^RecName: Full=Copal-8-ol diphosphate hydratase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN39347_c0_g1_i1.p1","481-2640[-]","CLDS_TOBAC^CLDS_TOBAC^Q:94-713,H:98-736^51.48%ID^E:0^RecName: Full=Copal-8-ol diphosphate hydratase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00432.18^Prenyltrans^Prenyltransferase and squalene oxidase repeat^136-151^E:6.7`PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^270-474^E:9.4e-48`PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^522-617^E:3.9e-15",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0016836^molecular_function^hydro-lyase activity`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:1902243^biological_process^copal-8-ol diphosphate(3-) biosynthetic process`GO:1902247^biological_process^geranylgeranyl diphosphate catabolic process","GO:0003824^molecular_function^catalytic activity`GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN44373_c6_g2","leaves S. yangii","roots S. yangii",-3.28615317898581,0,0,"TRINITY_DN44373_c6_g2_i3","12KD_FRAAN^12KD_FRAAN^Q:1031-714,H:1-99^58.49%ID^E:5e-29^RecName: Full=Auxin-repressed 12.5 kDa protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".","TRINITY_DN44373_c6_g2_i3.p1","705-1295[-]","12KD_FRAAN^12KD_FRAAN^Q:89-194,H:1-99^58.49%ID^E:7e-31^RecName: Full=Auxin-repressed 12.5 kDa protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria","PF05564.9^Auxin_repressed^Dormancy/auxin associated protein^95-195^E:6.9e-45",".",".",".",".","GO:0009734^biological_process^auxin-activated signaling pathway",".",".","."]
["TRINITY_DN44501_c1_g5","leaves S. yangii","roots S. yangii",-3.33065560309734,0,0,"TRINITY_DN44501_c1_g5_i2","CAMT1_POPTR^CAMT1_POPTR^Q:65-799,H:1-245^89.39%ID^E:2e-162^RecName: Full=Caffeoyl-CoA O-methyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus",".","TRINITY_DN44501_c1_g5_i2.p1","65-808[+]","CAMT1_POPTR^CAMT1_POPTR^Q:1-245,H:1-245^89.39%ID^E:8e-165^RecName: Full=Caffeoyl-CoA O-methyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus","PF01596.14^Methyltransf_3^O-methyltransferase^35-245^E:1.2e-104`PF13578.3^Methyltransf_24^Methyltransferase domain^84-190^E:1.3e-08",".",".","COG4122^O-methyltransferase","KEGG:pop:POPTR_0009s10270g`KO:K00588","GO:0042409^molecular_function^caffeoyl-CoA O-methyltransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0009809^biological_process^lignin biosynthetic process","GO:0008171^molecular_function^O-methyltransferase activity",".","."]
["TRINITY_DN46808_c2_g1","leaves S. yangii","roots S. yangii",-3.38723174335548,0,0,"TRINITY_DN46808_c2_g1_i1","LEC2_CLAKE^LEC2_CLAKE^Q:666-205,H:117-274^40.74%ID^E:1e-28^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN46808_c2_g1_i1.p2","163-672[-]","LEC2_CLAKE^LEC2_CLAKE^Q:3-156,H:117-274^40.74%ID^E:2e-29^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^5-158^E:1.1e-32",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN43402_c3_g1","leaves S. yangii","roots S. yangii",-3.38841077018644,0,0,"TRINITY_DN43402_c3_g1_i3","CLPB1_ARATH^CLPB1_ARATH^Q:3019-1061,H:1-653^86.85%ID^E:0^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CLPB1_ARATH^CLPB1_ARATH^Q:978-244,H:654-896^82.19%ID^E:7e-122^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43402_c3_g1_i3.p1","1058-3019[-]","CLPB1_ARATH^CLPB1_ARATH^Q:1-653,H:1-653^86.85%ID^E:0^RecName: Full=Chaperone protein ClpB1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02861.17^Clp_N^Clp amino terminal domain, pathogenicity island component^17-60^E:3.9e-07`PF02861.17^Clp_N^Clp amino terminal domain, pathogenicity island component^97-147^E:8.4e-10`PF00004.26^AAA^ATPase family associated with various cellular activities (AAA)^205-321^E:9.9e-14`PF07724.11^AAA_2^AAA domain (Cdc48 subfamily)^598-653^E:4.8e-15",".",".","COG0542^ATP-dependent CLP protease ATP-binding subunit","KEGG:ath:AT1G74310`KO:K03695","GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0045727^biological_process^positive regulation of translation`GO:0019538^biological_process^protein metabolic process`GO:0043335^biological_process^protein unfolding`GO:0009408^biological_process^response to heat`GO:0009644^biological_process^response to high light intensity`GO:0042542^biological_process^response to hydrogen peroxide","GO:0019538^biological_process^protein metabolic process`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN45276_c0_g1","leaves S. yangii","roots S. yangii",-3.50056412950968,0,0,"TRINITY_DN45276_c0_g1_i6","PHO1_ARATH^PHO1_ARATH^Q:3270-4700,H:306-782^73.79%ID^E:0^RecName: Full=Phosphate transporter PHO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45276_c0_g1_i6.p1","3282-4703[+]","PHO1_ARATH^PHO1_ARATH^Q:1-473,H:310-782^73.57%ID^E:0^RecName: Full=Phosphate transporter PHO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03105.16^SPX^SPX domain^2-27^E:2.4e-06`PF03124.11^EXS^EXS family^117-450^E:8.8e-83",".",".","COG5409^Xenotropic and polytropic retrovirus receptor 1","KEGG:ath:AT3G23430","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0015114^molecular_function^phosphate ion transmembrane transporter activity`GO:0016036^biological_process^cellular response to phosphate starvation`GO:0035435^biological_process^phosphate ion transmembrane transport","GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN44501_c1_g3","leaves S. yangii","roots S. yangii",-3.62663546584034,0,0,"TRINITY_DN44501_c1_g3_i3","CAMT_VITVI^CAMT_VITVI^Q:89-814,H:1-242^94.63%ID^E:2e-169^RecName: Full=Caffeoyl-CoA O-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN44501_c1_g3_i3.p1","74-817[+]","CAMT_VITVI^CAMT_VITVI^Q:6-247,H:1-242^94.63%ID^E:3e-171^RecName: Full=Caffeoyl-CoA O-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF01596.14^Methyltransf_3^O-methyltransferase^35-245^E:9.3e-103`PF13578.3^Methyltransf_24^Methyltransferase domain^84-190^E:3.5e-09",".",".","COG4122^O-methyltransferase","KEGG:vvi:100233087`KO:K00588","GO:0042409^molecular_function^caffeoyl-CoA O-methyltransferase activity`GO:0046872^molecular_function^metal ion binding`GO:0009809^biological_process^lignin biosynthetic process","GO:0008171^molecular_function^O-methyltransferase activity",".","."]
["TRINITY_DN47530_c1_g5","leaves S. yangii","roots S. yangii",-3.62908362436873,0,0,"TRINITY_DN47530_c1_g5_i2","U91C1_ARATH^U91C1_ARATH^Q:950-1717,H:199-451^53.91%ID^E:1e-82^RecName: Full=UDP-glycosyltransferase 91C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U91C1_ARATH^U91C1_ARATH^Q:89-655,H:9-193^57.14%ID^E:4e-66^RecName: Full=UDP-glycosyltransferase 91C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47530_c1_g5_i2.p1","68-688[+]","U91C1_ARATH^U91C1_ARATH^Q:1-196,H:2-193^55.1%ID^E:5e-71^RecName: Full=UDP-glycosyltransferase 91C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1819^Transferase","KEGG:ath:AT5G49690","GO:0005829^cellular_component^cytosol`GO:0016758^molecular_function^transferase activity, transferring hexosyl groups",".",".","."]
["TRINITY_DN45504_c3_g1","leaves S. yangii","roots S. yangii",-3.68362022794504,0,0,"TRINITY_DN45504_c3_g1_i4","GL22_ORYSJ^GL22_ORYSJ^Q:813-175,H:1-222^45.54%ID^E:1e-53^RecName: Full=Putative germin-like protein 2-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45504_c3_g1_i4.p1","163-813[-]","GL22_ORYSJ^GL22_ORYSJ^Q:1-213,H:1-222^45.54%ID^E:4e-55^RecName: Full=Putative germin-like protein 2-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00190.19^Cupin_1^Cupin^57-208^E:1.5e-32`PF07883.8^Cupin_2^Cupin domain^96-167^E:2.8e-11","sigP:1^22^0.831^YES",".","ENOG410YERY^nutrient reservoir activity","KEGG:osa:4329390","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0030145^molecular_function^manganese ion binding`GO:0045735^molecular_function^nutrient reservoir activity`GO:0046564^molecular_function^oxalate decarboxylase activity`GO:0033609^biological_process^oxalate metabolic process","GO:0045735^molecular_function^nutrient reservoir activity",".","."]
["TRINITY_DN44924_c1_g1","leaves S. yangii","roots S. yangii",-3.6921230705207,0,0,"TRINITY_DN44924_c1_g1_i1","CIPK5_ARATH^CIPK5_ARATH^Q:1-804,H:165-442^63.67%ID^E:6e-108^RecName: Full=CBL-interacting serine/threonine-protein kinase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44924_c1_g1_i1.p1","1-807[+]","CIPK5_ARATH^CIPK5_ARATH^Q:1-268,H:165-442^63.67%ID^E:3e-124^RecName: Full=CBL-interacting serine/threonine-protein kinase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^5-103^E:2.9e-23`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^13-98^E:6.4e-07`PF03822.11^NAF^NAF domain^135-190^E:2.5e-17",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G10930","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0007165^biological_process^signal transduction","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation`GO:0007165^biological_process^signal transduction",".","."]
["TRINITY_DN45861_c2_g1","leaves S. yangii","roots S. yangii",-3.69621645851982,0,0,"TRINITY_DN45861_c2_g1_i5","4CL1_TOBAC^4CL1_TOBAC^Q:1610-531,H:189-512^79.72%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`4CL1_TOBAC^4CL1_TOBAC^Q:438-343,H:505-536^71.88%ID^E:3e-06^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45861_c2_g1_i5.p1","711-1613[-]","4CL1_TOBAC^4CL1_TOBAC^Q:2-288,H:189-475^88.5%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00501.25^AMP-binding^AMP-binding enzyme^3-260^E:3.2e-78",".",".",".",".","GO:0016207^molecular_function^4-coumarate-CoA ligase activity`GO:0005524^molecular_function^ATP binding`GO:0009698^biological_process^phenylpropanoid metabolic process","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN43821_c1_g1","leaves S. yangii","roots S. yangii",-3.73159760157345,0,0,"TRINITY_DN43821_c1_g1_i3","VIP1_ARATH^VIP1_ARATH^Q:1064-447,H:7-255^44.98%ID^E:3e-41^RecName: Full=Transcription factor VIP1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43821_c1_g1_i3.p1","237-1085[-]","VIP1_ARATH^VIP1_ARATH^Q:8-249,H:7-291^47.93%ID^E:2e-66^RecName: Full=Transcription factor VIP1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07716.12^bZIP_2^Basic region leucine zipper^152-203^E:1.9e-07`PF00170.18^bZIP_1^bZIP transcription factor^154-206^E:1.2e-08",".",".","ENOG410YA2S^Transcription factor","KEGG:ath:AT1G43700","GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0051019^molecular_function^mitogen-activated protein kinase binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009970^biological_process^cellular response to sulfate starvation`GO:0006952^biological_process^defense response`GO:0009294^biological_process^DNA mediated transformation`GO:0045596^biological_process^negative regulation of cell differentiation`GO:0051170^biological_process^nuclear import`GO:0007231^biological_process^osmosensory signaling pathway`GO:0008272^biological_process^sulfate transport`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43709_c3_g3","leaves S. yangii","roots S. yangii",-3.79753365520397,0,0,"TRINITY_DN43709_c3_g3_i1","NDB2_ARATH^NDB2_ARATH^Q:670-2427,H:1-582^70.7%ID^E:0^RecName: Full=External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43709_c3_g3_i1.p1","670-2430[+]","NDB2_ARATH^NDB2_ARATH^Q:1-586,H:1-582^71.21%ID^E:0^RecName: Full=External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07992.11^Pyr_redox_2^Pyridine nucleotide-disulphide oxidoreductase^61-386^E:4.9e-58`PF00070.24^Pyr_redox^Pyridine nucleotide-disulphide oxidoreductase^227-311^E:1.7e-11",".",".",".",".","GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005758^cellular_component^mitochondrial intermembrane space`GO:0005739^cellular_component^mitochondrion`GO:0005777^cellular_component^peroxisome`GO:0005509^molecular_function^calcium ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46547_c1_g3","leaves S. yangii","roots S. yangii",-3.84428558352171,0,0,"TRINITY_DN46547_c1_g3_i1","GSTU8_ARATH^GSTU8_ARATH^Q:32-658,H:7-215^57.82%ID^E:2e-73^RecName: Full=Glutathione S-transferase U8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46547_c1_g3_i1.p1","83-667[+]","GSTX1_TOBAC^GSTX1_TOBAC^Q:2-188,H:21-205^60.96%ID^E:4e-74^RecName: Full=Probable glutathione S-transferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^1-60^E:1.8e-10`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^1-56^E:3.5e-08`PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^2-56^E:1.4e-15`PF00043.22^GST_C^Glutathione S-transferase, C-terminal domain^99-172^E:7.8e-13",".",".",".",".","GO:0004364^molecular_function^glutathione transferase activity`GO:0009734^biological_process^auxin-activated signaling pathway","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN45628_c6_g1","leaves S. yangii","roots S. yangii",-3.87450039700782,0,0,"TRINITY_DN45628_c6_g1_i5","FQRL1_ARATH^FQRL1_ARATH^Q:1013-423,H:4-200^82.74%ID^E:8e-116^RecName: Full=Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45628_c6_g1_i5.p1","411-1112[-]","FQRL1_ARATH^FQRL1_ARATH^Q:34-230,H:4-200^82.74%ID^E:3e-118^RecName: Full=Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02525.14^Flavodoxin_2^Flavodoxin-like fold^34-149^E:1.5e-06`PF03358.12^FMN_red^NADPH-dependent FMN reductase^47-175^E:8.6e-12",".",".","COG0655^Nadph-dependent fmn reductase","KEGG:ath:AT4G27270`KO:K03809","GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0010181^molecular_function^FMN binding`GO:0003955^molecular_function^NAD(P)H dehydrogenase (quinone) activity`GO:0045892^biological_process^negative regulation of transcription, DNA-templated","GO:0016491^molecular_function^oxidoreductase activity",".","."]
["TRINITY_DN45390_c2_g6","leaves S. yangii","roots S. yangii",-3.93871955503344,0,0,"TRINITY_DN45390_c2_g6_i4","ZWIP2_ARATH^ZWIP2_ARATH^Q:1024-380,H:122-367^63.31%ID^E:1e-103^RecName: Full=Zinc finger protein WIP2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45390_c2_g6_i4.p1","377-1441[-]","ZWIP2_ARATH^ZWIP2_ARATH^Q:140-354,H:122-367^63.31%ID^E:2e-106^RecName: Full=Zinc finger protein WIP2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12874.4^zf-met^Zinc-finger of C2H2 type^202-221^E:0.018",".",".","COG5048^Zinc finger protein","KEGG:ath:AT3G57670","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003676^molecular_function^nucleic acid binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:1990058^biological_process^fruit replum development`GO:0009860^biological_process^pollen tube growth`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated`GO:0010500^biological_process^transmitting tissue development",".",".","."]
["TRINITY_DN45019_c0_g5","leaves S. yangii","roots S. yangii",-3.93892495207996,0,0,"TRINITY_DN45019_c0_g5_i1","BAME1_ARATH^BAME1_ARATH^Q:164-2773,H:18-886^76.91%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`BAME1_ARATH^BAME1_ARATH^Q:3042-3380,H:863-975^86.73%ID^E:3e-54^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45019_c0_g5_i1.p1","110-2761[+]","BAME1_ARATH^BAME1_ARATH^Q:12-878,H:12-881^76.81%ID^E:0^RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^25-63^E:3.1e-14`PF13855.3^LRR_8^Leucine rich repeat^115-173^E:2.2e-07`PF00560.30^LRR_1^Leucine Rich Repeat^164-183^E:0.87`PF00560.30^LRR_1^Leucine Rich Repeat^285-307^E:0.31`PF00069.22^Pkinase^Protein kinase domain^693-863^E:3.6e-35`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^693-863^E:9.5e-30","sigP:1^20^0.926^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G65700","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0043621^molecular_function^protein self-association`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0033612^molecular_function^receptor serine/threonine kinase binding`GO:0030154^biological_process^cell differentiation`GO:0048437^biological_process^floral organ development`GO:0048229^biological_process^gametophyte development`GO:0010075^biological_process^regulation of meristem growth","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN37262_c0_g3","leaves S. yangii","roots S. yangii",-3.99586884697165,{"v":8600897801.42051,"d":"8.60E+09"},"0.000131222646497933","TRINITY_DN37262_c0_g3_i1","BHLHW_PEA^BHLHW_PEA^Q:3-320,H:420-554^52.59%ID^E:1e-28^RecName: Full=Basic helix-loop-helix protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN37262_c0_g3_i1.p1","3-332[+]","BHLHW_PEA^BHLHW_PEA^Q:1-106,H:420-554^54.81%ID^E:1e-34^RecName: Full=Basic helix-loop-helix protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^35-80^E:3e-12",".",".",".",".","GO:0005634^cellular_component^nucleus`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN46687_c0_g5","leaves S. yangii","roots S. yangii",-4.00298254519052,0,0,"TRINITY_DN46687_c0_g5_i1","CADH9_ARATH^CADH9_ARATH^Q:2831-1779,H:8-358^74.64%ID^E:3e-177^RecName: Full=Probable cinnamyl alcohol dehydrogenase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46687_c0_g5_i1.p2","1770-2837[-]","CADH9_ARATH^CADH9_ARATH^Q:3-353,H:8-358^74.64%ID^E:0^RecName: Full=Probable cinnamyl alcohol dehydrogenase 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^33-145^E:1e-28`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^189-311^E:5.6e-18",".",".","COG1064^alcohol dehydrogenase","KEGG:ath:AT4G39330`KO:K00083","GO:0048046^cellular_component^apoplast`GO:0045551^molecular_function^cinnamyl-alcohol dehydrogenase activity`GO:0052747^molecular_function^sinapyl alcohol dehydrogenase activity`GO:0008270^molecular_function^zinc ion binding`GO:0009809^biological_process^lignin biosynthetic process`GO:0009735^biological_process^response to cytokinin","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45198_c5_g3","leaves S. yangii","roots S. yangii",-4.13642958114905,0,0,"TRINITY_DN45198_c5_g3_i2","PRU1_PRUAR^PRU1_PRUAR^Q:1163-1621,H:1-152^44.44%ID^E:1e-33^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN45198_c5_g3_i2.p1","1022-1648[+]","PRU1_PRUAR^PRU1_PRUAR^Q:48-208,H:1-160^45.34%ID^E:5e-41^RecName: Full=Major allergen Pru ar 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^61-185^E:5.1e-23",".",".",".",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN45156_c1_g1","leaves S. yangii","roots S. yangii",-4.22059417484406,0,0,"TRINITY_DN45156_c1_g1_i6","IAA26_ARATH^IAA26_ARATH^Q:1383-946,H:95-236^62.59%ID^E:8e-42^RecName: Full=Auxin-responsive protein IAA26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45156_c1_g1_i6.p1","943-1833[-]","IAA18_ORYSJ^IAA18_ORYSJ^Q:14-296,H:14-299^40.98%ID^E:2e-53^RecName: Full=Auxin-responsive protein IAA18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02309.13^AUX_IAA^AUX/IAA family^42-296^E:1.9e-58",".",".","ENOG410YI31^Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations","KEGG:osa:4339365`KO:K14484","GO:0005634^cellular_component^nucleus`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009733^biological_process^response to auxin`GO:0006351^biological_process^transcription, DNA-templated","GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN39976_c0_g1","leaves S. yangii","roots S. yangii",-4.27870258103086,0,0,"TRINITY_DN39976_c0_g1_i2","ASPG1_ARATH^ASPG1_ARATH^Q:1453-269,H:106-500^33.17%ID^E:1e-59^RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39976_c0_g1_i2.p1","263-1753[-]","ASPG1_ARATH^ASPG1_ARATH^Q:101-495,H:106-500^33.9%ID^E:4e-61^RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^154-322^E:4.2e-48`PF00026.20^Asp^Eukaryotic aspartyl protease^154-208^E:1.3e-08`PF00026.20^Asp^Eukaryotic aspartyl protease^236-492^E:4.5e-15`PF14541.3^TAXi_C^Xylanase inhibitor C-terminal^342-492^E:6.4e-31",".",".","ENOG410XNV7^aspartic","KEGG:ath:AT3G18490","GO:0005783^cellular_component^endoplasmic reticulum`GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0070001^molecular_function^aspartic-type peptidase activity`GO:0003677^molecular_function^DNA binding`GO:0030163^biological_process^protein catabolic process`GO:0009737^biological_process^response to abscisic acid`GO:0009414^biological_process^response to water deprivation`GO:0009627^biological_process^systemic acquired resistance",".",".","."]
["TRINITY_DN45861_c2_g6","leaves S. yangii","roots S. yangii",-4.41024568363463,0,0,"TRINITY_DN45861_c2_g6_i2","4CL_VANPL^4CL_VANPL^Q:1975-578,H:10-478^80.81%ID^E:0^RecName: Full=4-coumarate--CoA ligase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae; Vanilloideae; Vanilleae; Vanilla`4CL_VANPL^4CL_VANPL^Q:467-285,H:480-540^90.16%ID^E:3e-25^RecName: Full=4-coumarate--CoA ligase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Orchidaceae; Vanilloideae; Vanilleae; Vanilla",".","TRINITY_DN45861_c2_g6_i2.p1","575-1990[-]","4CL1_TOBAC^4CL1_TOBAC^Q:1-471,H:3-474^80.17%ID^E:0^RecName: Full=4-coumarate--CoA ligase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00501.25^AMP-binding^AMP-binding enzyme^33-444^E:4.4e-110",".",".",".",".","GO:0016207^molecular_function^4-coumarate-CoA ligase activity`GO:0005524^molecular_function^ATP binding`GO:0009698^biological_process^phenylpropanoid metabolic process","GO:0003824^molecular_function^catalytic activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46634_c3_g5","leaves S. yangii","roots S. yangii",-4.47789851948224,0,0,"TRINITY_DN46634_c3_g5_i1","XTH2_SOYBN^XTH2_SOYBN^Q:291-650,H:162-283^63.11%ID^E:3e-66^RecName: Full=Xyloglucan endotransglucosylase/hydrolase 2 {ECO:0000250|UniProtKB:Q38857};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja`XTH2_SOYBN^XTH2_SOYBN^Q:2-202,H:95-161^68.66%ID^E:3e-66^RecName: Full=Xyloglucan endotransglucosylase/hydrolase 2 {ECO:0000250|UniProtKB:Q38857};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46634_c3_g5_i1.p1","294-662[+]","XTH15_ARATH^XTH15_ARATH^Q:1-121,H:159-288^61.54%ID^E:2e-50^RecName: Full=Xyloglucan endotransglucosylase/hydrolase protein 15 {ECO:0000303|PubMed:12514239};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00722.18^Glyco_hydro_16^Glycosyl hydrolases family 16^1-51^E:8.2e-13`PF06955.9^XET_C^Xyloglucan endo-transglycosylase (XET) C-terminus^75-117^E:1.7e-20",".",".","COG2273^hydrolase family 16","KEGG:ath:AT4G14130`KO:K08235","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0033946^molecular_function^xyloglucan-specific endo-beta-1,4-glucanase activity`GO:0016762^molecular_function^xyloglucan:xyloglucosyl transferase activity`GO:0042546^biological_process^cell wall biogenesis`GO:0071555^biological_process^cell wall organization`GO:0010411^biological_process^xyloglucan metabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process`GO:0016762^molecular_function^xyloglucan:xyloglucosyl transferase activity`GO:0006073^biological_process^cellular glucan metabolic process`GO:0005618^cellular_component^cell wall`GO:0048046^cellular_component^apoplast",".","."]
["TRINITY_DN44657_c2_g1","leaves S. yangii","roots S. yangii",-4.55628561109525,0,0,"TRINITY_DN44657_c2_g1_i4","CASL1_CANSA^CASL1_CANSA^Q:191-1687,H:34-543^48.34%ID^E:4e-151^RecName: Full=Cannabidiolic acid synthase-like 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis",".","TRINITY_DN44657_c2_g1_i4.p2","1951-3321[-]","F8H_ARATH^F8H_ARATH^Q:72-387,H:98-415^26.61%ID^E:7e-20^RecName: Full=Probable glucuronoxylan glucuronosyltransferase F8H;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03016.12^Exostosin^Exostosin family^82-370^E:6.5e-39",".",".","ENOG410XTFH^Exostosin","KEGG:ath:AT5G22940","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0071555^biological_process^cell wall organization",".",".","."]
["TRINITY_DN41443_c0_g1","leaves S. yangii","roots S. yangii",-4.61383004266929,"0.0157179130749076","0.0202888975685568","TRINITY_DN41443_c0_g1_i2","Y2913_ARATH^Y2913_ARATH^Q:6-338,H:72-193^43.55%ID^E:8e-18^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41443_c0_g1_i2.p1","3-338[+]","Y2913_ARATH^Y2913_ARATH^Q:2-112,H:72-193^43.55%ID^E:7e-18^RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01453.21^B_lectin^D-mannose binding lectin^2-98^E:5.2e-24",".",".","ENOG410YEQP^serine threonine-protein kinase","KEGG:ath:AT2G19130","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0005516^molecular_function^calmodulin binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0048544^biological_process^recognition of pollen",".",".","."]
["TRINITY_DN43370_c1_g3","leaves S. yangii","roots S. yangii",-4.6367301962325,0,0,"TRINITY_DN43370_c1_g3_i1","ERF80_ARATH^ERF80_ARATH^Q:1268-1044,H:30-104^74.67%ID^E:6e-23^RecName: Full=Ethylene-responsive transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43370_c1_g3_i1.p1","657-1457[-]","ERF80_ARATH^ERF80_ARATH^Q:64-263,H:30-196^42.29%ID^E:1e-34^RecName: Full=Ethylene-responsive transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^66-116^E:8.5e-13",".",".","ENOG41116MF^Transcription factor","KEGG:ath:AT5G44210`KO:K09286","GO:0016020^cellular_component^membrane`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006952^biological_process^defense response`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN73134_c0_g1","leaves S. yangii","roots S. yangii",-4.74701959847864,"0.0215091892053137","0.0273882293518977","TRINITY_DN73134_c0_g1_i1","SBT11_ARATH^SBT11_ARATH^Q:3-314,H:283-386^46.67%ID^E:4e-21^RecName: Full=Subtilisin-like protease SBT1.1 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN73134_c0_g1_i1.p1","3-326[+]","SBT11_ARATH^SBT11_ARATH^Q:1-104,H:283-386^46.67%ID^E:3e-21^RecName: Full=Subtilisin-like protease SBT1.1 {ECO:0000303|PubMed:16193095};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00082.19^Peptidase_S8^Subtilase family^2-58^E:1.2e-05",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT1G01900","GO:0005618^cellular_component^cell wall`GO:0031012^cellular_component^extracellular matrix`GO:0005578^cellular_component^proteinaceous extracellular matrix`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN45800_c0_g2","leaves S. yangii","roots S. yangii",-4.82430121686632,0,0,"TRINITY_DN45800_c0_g2_i1","TIP11_ARATH^TIP11_ARATH^Q:439-140,H:153-251^79%ID^E:4e-40^RecName: Full=Aquaporin TIP1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45800_c0_g2_i1.p1","137-439[-]","TIP11_ARATH^TIP11_ARATH^Q:1-100,H:153-251^79%ID^E:4e-49^RecName: Full=Aquaporin TIP1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^1-82^E:1.3e-30",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT2G36830`KO:K09873","GO:0042807^cellular_component^central vacuole`GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0000326^cellular_component^protein storage vacuole`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0015254^molecular_function^glycerol channel activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0080170^biological_process^hydrogen peroxide transmembrane transport`GO:0034220^biological_process^ion transmembrane transport`GO:0071918^biological_process^urea transmembrane transport`GO:0015840^biological_process^urea transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46100_c0_g2","leaves S. yangii","roots S. yangii",-4.82770066781707,0,0,"TRINITY_DN46100_c0_g2_i1","LEUC_ARATH^LEUC_ARATH^Q:704-174,H:333-509^87.01%ID^E:5e-162^RecName: Full=3-isopropylmalate dehydratase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LEUC_ARATH^LEUC_ARATH^Q:1131-706,H:174-315^83.8%ID^E:5e-162^RecName: Full=3-isopropylmalate dehydratase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46100_c0_g2_i1.p3","682-1131[-]","LEUC_ARATH^LEUC_ARATH^Q:1-142,H:174-315^83.8%ID^E:2e-82^RecName: Full=3-isopropylmalate dehydratase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00330.17^Aconitase^Aconitase family (aconitate hydratase)^3-146^E:2e-44",".",".","COG0065^Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (By similarity)","KEGG:ath:AT4G13430`KO:K01703","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0009536^cellular_component^plastid`GO:0003861^molecular_function^3-isopropylmalate dehydratase activity`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0050486^molecular_function^intramolecular transferase activity, transferring hydroxy groups`GO:0046872^molecular_function^metal ion binding`GO:0019761^biological_process^glucosinolate biosynthetic process`GO:0009098^biological_process^leucine biosynthetic process`GO:0046686^biological_process^response to cadmium ion","GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN44093_c0_g1","leaves S. yangii","roots S. yangii",-4.85848503990927,0,0,"TRINITY_DN44093_c0_g1_i4","CYPH1_SALMI^CYPH1_SALMI^Q:801-193,H:290-492^57.64%ID^E:2e-81^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN44093_c0_g1_i4.p1","184-804[-]","CYPH1_SALMI^CYPH1_SALMI^Q:2-204,H:290-492^57.64%ID^E:2e-82^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF00067.19^p450^Cytochrome P450^4-195^E:1.5e-62",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN42519_c0_g1","leaves S. yangii","roots S. yangii",-4.86426466669726,0,0,"TRINITY_DN42519_c0_g1_i1","PDC1_PEA^PDC1_PEA^Q:361-1584,H:27-435^85.82%ID^E:0^RecName: Full=Pyruvate decarboxylase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`PDC1_PEA^PDC1_PEA^Q:1667-2218,H:436-593^76.63%ID^E:0^RecName: Full=Pyruvate decarboxylase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN42519_c0_g1_i1.p1","307-1587[+]","PDC1_PEA^PDC1_PEA^Q:8-426,H:14-435^84.12%ID^E:0^RecName: Full=Pyruvate decarboxylase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF02776.15^TPP_enzyme_N^Thiamine pyrophosphate enzyme, N-terminal TPP binding domain^23-190^E:1.5e-35`PF00205.19^TPP_enzyme_M^Thiamine pyrophosphate enzyme, central domain^220-336^E:5.3e-21",".",".",".",".","GO:0000287^molecular_function^magnesium ion binding`GO:0004737^molecular_function^pyruvate decarboxylase activity`GO:0030976^molecular_function^thiamine pyrophosphate binding","GO:0030976^molecular_function^thiamine pyrophosphate binding`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN45422_c3_g10","leaves S. yangii","roots S. yangii",-4.86734981222968,0,0,"TRINITY_DN45422_c3_g10_i1","TIP11_ARATH^TIP11_ARATH^Q:539-3,H:1-179^73.74%ID^E:3e-75^RecName: Full=Aquaporin TIP1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45422_c3_g10_i1.p1","3-566[-]","TIP11_ARATH^TIP11_ARATH^Q:10-188,H:1-179^73.74%ID^E:4e-83^RecName: Full=Aquaporin TIP1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^23-188^E:1.8e-47",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT2G36830`KO:K09873","GO:0042807^cellular_component^central vacuole`GO:0009941^cellular_component^chloroplast envelope`GO:0016021^cellular_component^integral component of membrane`GO:0009705^cellular_component^plant-type vacuole membrane`GO:0000326^cellular_component^protein storage vacuole`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0015254^molecular_function^glycerol channel activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0080170^biological_process^hydrogen peroxide transmembrane transport`GO:0034220^biological_process^ion transmembrane transport`GO:0071918^biological_process^urea transmembrane transport`GO:0015840^biological_process^urea transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44427_c2_g4","leaves S. yangii","roots S. yangii",-4.87268635098595,0,0,"TRINITY_DN44427_c2_g4_i1","PTR28_ARATH^PTR28_ARATH^Q:1933-275,H:12-569^61.96%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 5.6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44427_c2_g4_i1.p1","209-1960[-]","PTR28_ARATH^PTR28_ARATH^Q:10-564,H:12-571^61.74%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 5.6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07690.13^MFS_1^Major Facilitator Superfamily^53-503^E:7.9e-11`PF00854.18^PTR2^POT family^106-521^E:4.9e-90",".",".","COG3104^transporter","KEGG:ath:AT2G37900","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006857^biological_process^oligopeptide transport","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN49726_c0_g1","leaves S. yangii","roots S. yangii",-4.87478715833489,"0.0109099751789056","0.0142751166365909","TRINITY_DN49726_c0_g1_i1","RCH2_ARATH^RCH2_ARATH^Q:556-17,H:267-438^36.11%ID^E:9e-25^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:717-556,H:201-255^30.91%ID^E:9e-25^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:556-26,H:483-675^32.31%ID^E:7e-18^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:562-11,H:337-536^30.77%ID^E:5e-16^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:556-14,H:122-295^28.57%ID^E:1e-13^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RCH2_ARATH^RCH2_ARATH^Q:562-14,H:96-271^27.72%ID^E:8e-10^RecName: Full=Receptor-like protein kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN49726_c0_g1_i1.p1","2-331[-]","Y2579_ARATH^Y2579_ARATH^Q:5-106,H:312-406^36.54%ID^E:1e-09^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^9-66^E:6.5e-07",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT2G25790","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44443_c2_g4","leaves S. yangii","roots S. yangii",-4.8880827329904,0,0,"TRINITY_DN44443_c2_g4_i4","SUC4_ARATH^SUC4_ARATH^Q:419-1819,H:43-506^74.36%ID^E:0^RecName: Full=Sucrose transport protein SUC4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44443_c2_g4_i4.p1","311-1834[+]","SUC4_ARATH^SUC4_ARATH^Q:4-503,H:17-506^71.26%ID^E:0^RecName: Full=Sucrose transport protein SUC4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13347.3^MFS_2^MFS/sugar transport protein^53-202^E:5.8e-13",".",".","ENOG410XPTR^solute carrier family 45 member","KEGG:ath:AT1G09960`KO:K15378","GO:0005801^cellular_component^cis-Golgi network`GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0008515^molecular_function^sucrose transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0005985^biological_process^sucrose metabolic process",".",".","."]
["TRINITY_DN43599_c3_g4","leaves S. yangii","roots S. yangii",-4.90667112708838,0,0,"TRINITY_DN43599_c3_g4_i2","GDU3_ARATH^GDU3_ARATH^Q:632-465,H:55-113^57.63%ID^E:5e-11^RecName: Full=Protein GLUTAMINE DUMPER 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43599_c3_g4_i2.p1","282-914[-]","GDU3_ARATH^GDU3_ARATH^Q:64-150,H:24-113^70%ID^E:4e-35^RecName: Full=Protein GLUTAMINE DUMPER 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YP3Q^glutamine dumper","KEGG:ath:AT5G57685","GO:0005623^cellular_component^cell`GO:0016021^cellular_component^integral component of membrane`GO:0006865^biological_process^amino acid transport`GO:0019048^biological_process^modulation by virus of host morphology or physiology`GO:0080143^biological_process^regulation of amino acid export`GO:0009615^biological_process^response to virus`GO:0032940^biological_process^secretion by cell",".",".","."]
["TRINITY_DN45249_c3_g3","leaves S. yangii","roots S. yangii",-4.9347560575122,0,0,"TRINITY_DN45249_c3_g3_i1","DIR1_ARATH^DIR1_ARATH^Q:713-300,H:35-171^44.2%ID^E:1e-30^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45249_c3_g3_i1.p1","243-920[-]","DIR1_ARATH^DIR1_ARATH^Q:70-220,H:35-179^42.38%ID^E:2e-32^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^76-220^E:7.4e-41",".",".","ENOG410YIMF^Dirigent-like protein","KEGG:ath:AT5G42510","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN44509_c2_g1","leaves S. yangii","roots S. yangii",-4.97851838227988,0,0,"TRINITY_DN44509_c2_g1_i2","CTL2_ARATH^CTL2_ARATH^Q:482-1327,H:37-319^76.68%ID^E:2e-149^RecName: Full=Chitinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44509_c2_g1_i2.p1","416-1357[+]","CTL2_ARATH^CTL2_ARATH^Q:10-304,H:24-319^74.32%ID^E:1e-169^RecName: Full=Chitinase-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00182.16^Glyco_hydro_19^Chitinase class I^61-287^E:7e-65","sigP:1^19^0.841^YES",".","COG3979^chitinase","KEGG:ath:AT3G16920","GO:0005576^cellular_component^extracellular region`GO:0005975^biological_process^carbohydrate metabolic process`GO:0016998^biological_process^cell wall macromolecule catabolic process`GO:0006032^biological_process^chitin catabolic process","GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0016998^biological_process^cell wall macromolecule catabolic process",".","."]
["TRINITY_DN44762_c0_g1","leaves S. yangii","roots S. yangii",-5.06257752792028,0,0,"TRINITY_DN44762_c0_g1_i5","ABAH1_ARATH^ABAH1_ARATH^Q:32-1327,H:1-394^69.21%ID^E:0^RecName: Full=Abscisic acid 8'-hydroxylase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ABAH1_ARATH^ABAH1_ARATH^Q:1443-1562,H:393-432^77.5%ID^E:1e-12^RecName: Full=Abscisic acid 8'-hydroxylase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44762_c0_g1_i5.p1","32-1135[+]","ABAH1_ARATH^ABAH1_ARATH^Q:1-365,H:1-361^75.07%ID^E:0^RecName: Full=Abscisic acid 8'-hydroxylase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^38-364^E:4e-48",".",".",".","KEGG:ath:AT4G19230`KO:K09843","GO:0016021^cellular_component^integral component of membrane`GO:0010295^molecular_function^(+)-abscisic acid 8'-hydroxylase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0046345^biological_process^abscisic acid catabolic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43951_c1_g3","leaves S. yangii","roots S. yangii",-5.07073290239999,"0.0107959536968822","0.0141296090731138","TRINITY_DN43951_c1_g3_i1","Y3475_ARATH^Y3475_ARATH^Q:6-314,H:612-721^43.1%ID^E:8e-14^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43951_c1_g3_i1.p1","3-326[+]","Y3475_ARATH^Y3475_ARATH^Q:2-104,H:612-721^43.1%ID^E:8e-14^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity",".",".","."]
["TRINITY_DN46888_c1_g1","leaves S. yangii","roots S. yangii",-5.1467756938731,0,0,"TRINITY_DN46888_c1_g1_i2","LIP4_ARATH^LIP4_ARATH^Q:1434-424,H:29-363^54.71%ID^E:2e-130^RecName: Full=GDSL esterase/lipase LIP-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46888_c1_g1_i2.p1","391-1509[-]","LIP4_ARATH^LIP4_ARATH^Q:5-370,H:7-371^53.24%ID^E:2e-139^RecName: Full=GDSL esterase/lipase LIP-4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^38-354^E:3.5e-27","sigP:1^30^0.619^YES",".","ENOG410YG8Q^GDSL esterase lipase","KEGG:ath:AT1G56670","GO:0005576^cellular_component^extracellular region`GO:0016788^molecular_function^hydrolase activity, acting on ester bonds`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN46917_c3_g1","leaves S. yangii","roots S. yangii",-5.1767188850727,0,0,"TRINITY_DN46917_c3_g1_i9","EXO_ARATH^EXO_ARATH^Q:1328-486,H:28-312^70.98%ID^E:1e-135^RecName: Full=Protein EXORDIUM;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46917_c3_g1_i9.p1","477-1418[-]","EXO_ARATH^EXO_ARATH^Q:31-313,H:28-314^71.88%ID^E:1e-147^RecName: Full=Protein EXORDIUM;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04674.9^Phi_1^Phosphate-induced protein 1 conserved region^38-312^E:8.5e-121","sigP:1^21^0.896^YES",".","ENOG410YFUT^Phi-1 protein","KEGG:ath:AT4G08950","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005615^cellular_component^extracellular space`GO:0005794^cellular_component^Golgi apparatus`GO:0009505^cellular_component^plant-type cell wall`GO:0009741^biological_process^response to brassinosteroid",".",".","."]
["TRINITY_DN43730_c0_g1","leaves S. yangii","roots S. yangii",-5.22835845558039,0,0,"TRINITY_DN43730_c0_g1_i4","TRM32_ARATH^TRM32_ARATH^Q:1774-1229,H:386-549^34.05%ID^E:3e-15^RecName: Full=Protein TRM32;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43730_c0_g1_i4.p1","1220-3295[-]","TRM32_ARATH^TRM32_ARATH^Q:224-689,H:131-549^25.9%ID^E:1e-16^RecName: Full=Protein TRM32;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14309.3^DUF4378^Domain of unknown function (DUF4378)^523-687^E:1.5e-28",".",".","ENOG410YHUX^NA","KEGG:ath:AT1G07620",".",".",".","."]
["TRINITY_DN45249_c3_g7","leaves S. yangii","roots S. yangii",-5.37099004970605,0,0,"TRINITY_DN45249_c3_g7_i1","DIR1_ARATH^DIR1_ARATH^Q:692-252,H:37-178^40.82%ID^E:9e-27^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45249_c3_g7_i1.p1","216-827[-]","DIR1_ARATH^DIR1_ARATH^Q:46-192,H:37-178^40.82%ID^E:5e-28^RecName: Full=Dirigent protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^50-180^E:2.4e-35","sigP:1^26^0.633^YES",".","ENOG410YIMF^Dirigent-like protein","KEGG:ath:AT5G42510","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN45804_c4_g2","leaves S. yangii","roots S. yangii",-5.6003419978779,"0.000675822148473917","0.000972167410185798","TRINITY_DN45804_c4_g2_i4","UBIQP_HORVU^UBIQP_HORVU^Q:1-309,H:3-105^98.06%ID^E:2e-65^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:1-276,H:79-170^97.83%ID^E:2e-57^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:223-309,H:1-29^100%ID^E:1e-11^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN45804_c4_g2_i4.p1","1-309[+]","UBIQP_HORVU^UBIQP_HORVU^Q:1-103,H:3-105^98.06%ID^E:1e-65^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:1-92,H:79-170^97.83%ID^E:2e-57^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum`UBIQP_HORVU^UBIQP_HORVU^Q:75-103,H:1-29^100%ID^E:1e-11^RecName: Full=Polyubiquitin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum","PF11976.5^Rad60-SLD^Ubiquitin-2 like Rad60 SUMO-like^17-87^E:1.4e-16`PF00240.20^ubiquitin^Ubiquitin family^19-90^E:8.3e-35`PF13881.3^Rad60-SLD_2^Ubiquitin-2 like Rad60 SUMO-like^25-87^E:0.0061`PF14560.3^Ubiquitin_2^Ubiquitin-like domain^27-85^E:1.4e-05",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44519_c3_g6","leaves S. yangii","roots S. yangii",-5.63104103928972,0,0,"TRINITY_DN44519_c3_g6_i1","OSS2_PEA^OSS2_PEA^Q:352-915,H:23-179^31.61%ID^E:4e-19^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:730-1014,H:67-165^35.35%ID^E:4e-13^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:661-1032,H:17-145^30.6%ID^E:6e-09^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44519_c3_g6_i1.p1","292-1026[+]","OSS2_PEA^OSS2_PEA^Q:15-208,H:17-179^30.65%ID^E:7e-21^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:147-241,H:67-165^35.35%ID^E:5e-14^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`OSS2_PEA^OSS2_PEA^Q:124-244,H:17-142^30.53%ID^E:2e-09^RecName: Full=Organ-specific protein S2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF10950.5^DUF2775^Protein of unknown function (DUF2775)^23-137^E:1.3e-22`PF10950.5^DUF2775^Protein of unknown function (DUF2775)^142-184^E:2.1e-11`PF10950.5^DUF2775^Protein of unknown function (DUF2775)^187-234^E:5.8e-14","sigP:1^21^0.768^YES",".",".",".",".",".",".","."]
["TRINITY_DN44323_c1_g1","leaves S. yangii","roots S. yangii",-5.72061670194742,"0.00402988767880674","0.00547203014756704","TRINITY_DN44323_c1_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:4-330,H:713-817^47.71%ID^E:4e-24^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44323_c1_g1_i1.p1","1-330[+]","R1A6_SOLDE^R1A6_SOLDE^Q:2-110,H:713-817^47.71%ID^E:4e-24^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-100^E:3.4e-22",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44676_c1_g7","leaves S. yangii","roots S. yangii",-5.80544163785287,"0.000556966385141276","0.00080627759584134","TRINITY_DN44676_c1_g7_i1","HIDM_GLYEC^HIDM_GLYEC^Q:327-1,H:11-121^56.76%ID^E:5e-30^RecName: Full=2-hydroxyisoflavanone dehydratase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Galegeae; Glycyrrhiza",".","TRINITY_DN44676_c1_g7_i1.p1","1-342[-]","HIDM_GLYEC^HIDM_GLYEC^Q:6-114,H:11-121^56.76%ID^E:2e-36^RecName: Full=2-hydroxyisoflavanone dehydratase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Galegeae; Glycyrrhiza","PF00135.25^COesterase^Carboxylesterase family^65-114^E:1.2e-07`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^74-114^E:1.4e-09",".",".",".",".","GO:0033987^molecular_function^2-hydroxyisoflavanone dehydratase activity`GO:0052689^molecular_function^carboxylic ester hydrolase activity`GO:0009813^biological_process^flavonoid biosynthetic process`GO:0009717^biological_process^isoflavonoid biosynthetic process`GO:0046287^biological_process^isoflavonoid metabolic process","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47217_c6_g3","leaves S. yangii","roots S. yangii",-5.81914882485186,0,0,"TRINITY_DN47217_c6_g3_i1","CVIF1_ARATH^CVIF1_ARATH^Q:178-651,H:22-168^38.61%ID^E:1e-33^RecName: Full=Cell wall / vacuolar inhibitor of fructosidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47217_c6_g3_i1.p1","1-624[+]","CVIF1_ARATH^CVIF1_ARATH^Q:60-203,H:22-162^39.58%ID^E:8e-35^RecName: Full=Cell wall / vacuolar inhibitor of fructosidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04043.12^PMEI^Plant invertase/pectin methylesterase inhibitor^63-200^E:1.4e-14",".",".","ENOG41113RP^cell wall vacuolar inhibitor of fructosidase","KEGG:ath:AT1G47960","GO:0005618^cellular_component^cell wall`GO:0005773^cellular_component^vacuole`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0043086^biological_process^negative regulation of catalytic activity","GO:0004857^molecular_function^enzyme inhibitor activity",".","."]
["TRINITY_DN44673_c4_g3","leaves S. yangii","roots S. yangii",-5.87171809863457,0,0,"TRINITY_DN44673_c4_g3_i10","DCE_SOLLC^DCE_SOLLC^Q:1323-298,H:163-502^76.32%ID^E:6e-179^RecName: Full=Glutamate decarboxylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN44673_c4_g3_i10.p1","295-1239[-]","DCE_SOLLC^DCE_SOLLC^Q:1-314,H:191-502^75.48%ID^E:2e-176^RecName: Full=Glutamate decarboxylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00282.16^Pyridoxal_deC^Pyridoxal-dependent decarboxylase conserved domain^1-192^E:7.2e-56",".",".","COG0076^decarboxylase","KEGG:sly:544313","GO:0004351^molecular_function^glutamate decarboxylase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0006536^biological_process^glutamate metabolic process","GO:0016831^molecular_function^carboxy-lyase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0019752^biological_process^carboxylic acid metabolic process",".","."]
["TRINITY_DN45696_c2_g1","leaves S. yangii","roots S. yangii",-5.93330294462963,0,0,"TRINITY_DN45696_c2_g1_i2","CRSP_ARATH^CRSP_ARATH^Q:268-2595,H:21-765^55.48%ID^E:0^RecName: Full=CO(2)-response secreted protease {ECO:0000303|PubMed:25043023};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45696_c2_g1_i2.p1","694-2598[+]","CRSP_ARATH^CRSP_ARATH^Q:11-634,H:147-765^58.31%ID^E:0^RecName: Full=CO(2)-response secreted protease {ECO:0000303|PubMed:25043023};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00082.19^Peptidase_S8^Subtilase family^59-456^E:4.6e-43`PF02225.19^PA^PA domain^261-332^E:2e-07",".",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT1G20160","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0008236^molecular_function^serine-type peptidase activity`GO:2000122^biological_process^negative regulation of stomatal complex development`GO:0006508^biological_process^proteolysis`GO:2000038^biological_process^regulation of stomatal complex development`GO:0010037^biological_process^response to carbon dioxide","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN45603_c2_g5","leaves S. yangii","roots S. yangii",-5.978361309159,0,0,"TRINITY_DN45603_c2_g5_i2","C71DA_SOYBN^C71DA_SOYBN^Q:242-1654,H:35-510^49.37%ID^E:1e-170^RecName: Full=Cytochrome P450 71D10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN45603_c2_g5_i2.p1","158-1666[+]","C71DA_SOYBN^C71DA_SOYBN^Q:9-499,H:15-510^48.59%ID^E:3e-176^RecName: Full=Cytochrome P450 71D10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00067.19^p450^Cytochrome P450^39-481^E:1.3e-96",".",".","COG2124^Cytochrome p450","KEGG:gmx:606548","GO:0016020^cellular_component^membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0044550^biological_process^secondary metabolite biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44620_c5_g1","leaves S. yangii","roots S. yangii",-6.05752076488494,"0.00150146517585437","0.00210358665270089","TRINITY_DN44620_c5_g1_i27","ACTB_ORYLA^ACTB_ORYLA^Q:330-1,H:72-181^98.18%ID^E:3e-75^RecName: Full=Actin, cytoplasmic 1;^Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias",".","TRINITY_DN44620_c5_g1_i27.p1","1-300[-]","ACT10_SOLTU^ACT10_SOLTU^Q:1-100,H:64-163^97%ID^E:6e-67^RecName: Full=Actin-85C;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00022.16^Actin^Actin^1-100^E:5.9e-41",".",".","COG5277^Actin-related protein",".","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN45008_c3_g4","leaves S. yangii","roots S. yangii",-6.07104426826319,0,0,"TRINITY_DN45008_c3_g4_i1","ERF12_ARATH^ERF12_ARATH^Q:188-424,H:52-133^74.39%ID^E:2e-24^RecName: Full=Ethylene-responsive transcription factor ERF012;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45008_c3_g4_i1.p1","101-757[+]","ERF12_ARATH^ERF12_ARATH^Q:28-217,H:50-229^45.96%ID^E:5e-39^RecName: Full=Ethylene-responsive transcription factor ERF012;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^27-76^E:7.8e-11",".",".","ENOG410YX49^Transcription factor","KEGG:ath:AT1G21910","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0071497^biological_process^cellular response to freezing`GO:0034605^biological_process^cellular response to heat`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45808_c0_g5","leaves S. yangii","roots S. yangii",-6.16430621719338,0,0,"TRINITY_DN45808_c0_g5_i1","PER42_ARATH^PER42_ARATH^Q:203-1183,H:4-330^78.9%ID^E:0^RecName: Full=Peroxidase 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45808_c0_g5_i1.p1","188-1189[+]","PER42_ARATH^PER42_ARATH^Q:6-332,H:4-330^78.9%ID^E:0^RecName: Full=Peroxidase 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^50-293^E:5.3e-61","sigP:1^25^0.829^YES",".","ENOG4111GTW^peroxidase","KEGG:ath:AT4G21960`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0009505^cellular_component^plant-type cell wall`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0009664^biological_process^plant-type cell wall organization`GO:0006979^biological_process^response to oxidative stress`GO:0048511^biological_process^rhythmic process","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43717_c0_g1","leaves S. yangii","roots S. yangii",-6.21291138566674,0,0,"TRINITY_DN43717_c0_g1_i5","APY_SOLTU^APY_SOLTU^Q:1481-204,H:42-443^51.17%ID^E:4e-126^RecName: Full=Apyrase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN43717_c0_g1_i5.p1","198-1526[-]","APY_SOLTU^APY_SOLTU^Q:12-441,H:38-443^50.93%ID^E:1e-147^RecName: Full=Apyrase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01150.14^GDA1_CD39^GDA1/CD39 (nucleoside phosphatase) family^16-221^E:1.6e-62`PF01150.14^GDA1_CD39^GDA1/CD39 (nucleoside phosphatase) family^240-441^E:1.7e-30","sigP:1^21^0.663^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN46213_c1_g4","leaves S. yangii","roots S. yangii",-6.25702547452607,"0.000540356718268241","0.000783407983920264","TRINITY_DN46213_c1_g4_i1","R1B17_SOLDE^R1B17_SOLDE^Q:43-951,H:771-1076^31.75%ID^E:2e-33^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46213_c1_g4_i1.p1","1-960[+]","R1B17_SOLDE^R1B17_SOLDE^Q:15-317,H:771-1076^31.75%ID^E:2e-33^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^8-66^E:7e-13",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47322_c0_g2","leaves S. yangii","roots S. yangii",-6.38849010910282,0,0,"TRINITY_DN47322_c0_g2_i14","CYPH1_SALMI^CYPH1_SALMI^Q:1-432,H:177-318^40.69%ID^E:2e-32^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN47322_c0_g2_i14.p1","1-432[+]","CYPH1_SALMI^CYPH1_SALMI^Q:1-144,H:177-318^40.69%ID^E:2e-32^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF00067.19^p450^Cytochrome P450^3-144^E:7e-17",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46883_c0_g2","leaves S. yangii","roots S. yangii",-6.43660559296968,0,0,"TRINITY_DN46883_c0_g2_i10","AHK5_ARATH^AHK5_ARATH^Q:42-2516,H:129-884^54.04%ID^E:0^RecName: Full=Histidine kinase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AHK5_ARATH^AHK5_ARATH^Q:2617-2733,H:883-921^74.36%ID^E:2e-11^RecName: Full=Histidine kinase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46883_c0_g2_i10.p2","3-1091[+]","AHK5_ARATH^AHK5_ARATH^Q:14-361,H:129-475^73.56%ID^E:2e-177^RecName: Full=Histidine kinase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00512.22^HisKA^His Kinase A (phospho-acceptor) domain^254-317^E:6.4e-17",".",".","ENOG410XNMH^Histidine kinase","KEGG:ath:AT5G10720","GO:0005737^cellular_component^cytoplasm`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0046872^molecular_function^metal ion binding`GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0004673^molecular_function^protein histidine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0070301^biological_process^cellular response to hydrogen peroxide`GO:0071219^biological_process^cellular response to molecule of bacterial origin`GO:0071732^biological_process^cellular response to nitric oxide`GO:0009736^biological_process^cytokinin-activated signaling pathway`GO:0006952^biological_process^defense response`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:0010105^biological_process^negative regulation of ethylene-activated signaling pathway`GO:0018106^biological_process^peptidyl-histidine phosphorylation`GO:0090333^biological_process^regulation of stomatal closure`GO:0048364^biological_process^root development","GO:0000155^molecular_function^phosphorelay sensor kinase activity`GO:0007165^biological_process^signal transduction",".","."]
["TRINITY_DN47354_c4_g1","leaves S. yangii","roots S. yangii",-6.47338669249539,0,0,"TRINITY_DN47354_c4_g1_i10","P2C03_ARATH^P2C03_ARATH^Q:945-1391,H:168-306^72.48%ID^E:2e-71^RecName: Full=Protein phosphatase 2C 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`P2C03_ARATH^P2C03_ARATH^Q:712-873,H:116-169^68.52%ID^E:2e-71^RecName: Full=Protein phosphatase 2C 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`P2C03_ARATH^P2C03_ARATH^Q:2115-2447,H:308-435^51.56%ID^E:1e-26^RecName: Full=Protein phosphatase 2C 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47354_c4_g1_i10.p1","403-900[+]","P2C03_ARATH^P2C03_ARATH^Q:104-157,H:116-169^68.52%ID^E:2e-19^RecName: Full=Protein phosphatase 2C 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0631^Phosphatase","KEGG:ath:AT1G07430`KO:K14497","GO:0005886^cellular_component^plasma membrane`GO:0046872^molecular_function^metal ion binding`GO:0005267^molecular_function^potassium channel activity`GO:0004722^molecular_function^protein serine/threonine phosphatase activity`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:1902039^biological_process^negative regulation of seed dormancy process`GO:0009939^biological_process^positive regulation of gibberellic acid mediated signaling pathway`GO:0010030^biological_process^positive regulation of seed germination`GO:0048838^biological_process^release of seed from dormancy",".",".","."]
["TRINITY_DN45764_c0_g2","leaves S. yangii","roots S. yangii",-6.5255883840558,0,0,"TRINITY_DN45764_c0_g2_i1","DTX16_ARATH^DTX16_ARATH^Q:1736-381,H:20-471^57.08%ID^E:4e-173^RecName: Full=Protein DETOXIFICATION 16 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45764_c0_g2_i1.p1","363-1820[-]","DTX16_ARATH^DTX16_ARATH^Q:29-480,H:20-471^57.08%ID^E:2e-179^RecName: Full=Protein DETOXIFICATION 16 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^45-205^E:1.7e-37`PF01554.15^MatE^MatE^266-428^E:1e-29",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT5G52450`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0009624^biological_process^response to nematode","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44957_c1_g4","leaves S. yangii","roots S. yangii",-6.57449432346481,0,0,"TRINITY_DN44957_c1_g4_i1","DRE1D_ARATH^DRE1D_ARATH^Q:231-1,H:17-96^77.5%ID^E:7e-34^RecName: Full=Dehydration-responsive element-binding protein 1D;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44957_c1_g4_i1.p1","1-330[-]","DRE1D_ARATH^DRE1D_ARATH^Q:31-110,H:14-96^77.11%ID^E:5e-36^RecName: Full=Dehydration-responsive element-binding protein 1D;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^66-110^E:8.7e-13",".",".","ENOG410YK37^dehydration-responsive element-binding protein","KEGG:ath:AT5G51990","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47694_c2_g2","leaves S. yangii","roots S. yangii",-6.58981868773006,0,0,"TRINITY_DN47694_c2_g2_i3","TPSCM_MENPI^TPSCM_MENPI^Q:166-543,H:124-250^75.97%ID^E:1e-51^RecName: Full=Cis-muuroladiene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha`TPSCM_MENPI^TPSCM_MENPI^Q:3-167,H:54-110^62.07%ID^E:1e-51^RecName: Full=Cis-muuroladiene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN47694_c2_g2_i3.p1","121-546[+]","TPSBF_MENPI^TPSBF_MENPI^Q:16-141,H:123-249^75.97%ID^E:3e-57^RecName: Full=Beta-farnesene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^17-87^E:6.2e-20",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0006952^biological_process^defense response`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN43650_c0_g2","leaves S. yangii","roots S. yangii",-6.70201624900177,0,0,"TRINITY_DN43650_c0_g2_i1","FAOMT_VITVI^FAOMT_VITVI^Q:1377-1015,H:17-137^76.03%ID^E:4e-59^RecName: Full=Flavonoid 3',5'-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis`FAOMT_VITVI^FAOMT_VITVI^Q:594-313,H:141-234^69.15%ID^E:6e-38^RecName: Full=Flavonoid 3',5'-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN43650_c0_g2_i1.p1","982-1392[-]","FAOMT_VITVI^FAOMT_VITVI^Q:6-126,H:17-137^76.03%ID^E:3e-65^RecName: Full=Flavonoid 3',5'-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis","PF01596.14^Methyltransf_3^O-methyltransferase^10-127^E:2.4e-49",".",".","COG4122^O-methyltransferase",".","GO:0005737^cellular_component^cytoplasm`GO:0046872^molecular_function^metal ion binding`GO:0008171^molecular_function^O-methyltransferase activity`GO:0009718^biological_process^anthocyanin-containing compound biosynthetic process`GO:0033485^biological_process^cyanidin 3-O-glucoside biosynthetic process`GO:0033486^biological_process^delphinidin 3-O-glucoside biosynthetic process`GO:0043473^biological_process^pigmentation","GO:0008171^molecular_function^O-methyltransferase activity",".","."]
["TRINITY_DN117023_c0_g1","leaves S. yangii","roots S. yangii",-6.7126242453829,"0.00104924657394648","0.00148734139289205","TRINITY_DN117023_c0_g1_i1","CSPLB_VITVI^CSPLB_VITVI^Q:184-570,H:27-155^58.14%ID^E:5e-31^RecName: Full=CASP-like protein 1C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis",".","TRINITY_DN117023_c0_g1_i1.p1","106-597[+]","CSPL6_RICCO^CSPL6_RICCO^Q:1-156,H:1-156^52.56%ID^E:1e-55^RecName: Full=CASP-like protein 1C1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus","PF04535.9^DUF588^Domain of unknown function (DUF588)^10-141^E:1.3e-36","sigP:1^23^0.627^YES",".",".","KEGG:rcu:RCOM_1174750","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN47595_c1_g1","leaves S. yangii","roots S. yangii",-6.75757672160136,0,0,"TRINITY_DN47595_c1_g1_i10","LEC2_CLAKE^LEC2_CLAKE^Q:1210-701,H:23-194^41.81%ID^E:3e-33^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis`LEC2_CLAKE^LEC2_CLAKE^Q:662-486,H:234-290^45.76%ID^E:3e-33^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN47595_c1_g1_i10.p1","758-1360[-]","LEC2_CLAKE^LEC2_CLAKE^Q:51-198,H:23-171^41.56%ID^E:2e-21^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^70-198^E:1.4e-21",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN47181_c1_g1","leaves S. yangii","roots S. yangii",-6.77011532602876,0,0,"TRINITY_DN47181_c1_g1_i1","EXLB1_ARATH^EXLB1_ARATH^Q:856-95,H:1-249^55.86%ID^E:3e-94^RecName: Full=Expansin-like B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47181_c1_g1_i1.p1","89-814[-]","EXLB1_ARATH^EXLB1_ARATH^Q:3-240,H:14-249^58.33%ID^E:1e-95^RecName: Full=Expansin-like B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03330.15^DPBB_1^Lytic transglycolase^52-128^E:6.6e-10`PF01357.18^Pollen_allerg_1^Pollen allergen^141-224^E:3.4e-19","sigP:1^13^0.571^YES",".","ENOG41115SZ^expansin-like","KEGG:ath:AT4G17030","GO:0005576^cellular_component^extracellular region`GO:0019953^biological_process^sexual reproduction",".",".","."]
["TRINITY_DN34300_c0_g1","leaves S. yangii","roots S. yangii",-6.83409297494332,"0.0001740354914137","0.000260829781577677","TRINITY_DN34300_c0_g1_i1","CUCM1_CUCME^CUCM1_CUCME^Q:3-353,H:193-310^70.34%ID^E:2e-46^RecName: Full=Cucumisin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis",".","TRINITY_DN34300_c0_g1_i1.p1","3-359[+]","CUCM1_CUCME^CUCM1_CUCME^Q:1-117,H:193-310^70.34%ID^E:2e-46^RecName: Full=Cucumisin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis","PF00082.19^Peptidase_S8^Subtilase family^6-117^E:8.6e-16",".",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0004252^molecular_function^serine-type endopeptidase activity","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN35270_c0_g1","leaves S. yangii","roots S. yangii",-7.17565741241037,0,0,"TRINITY_DN35270_c0_g1_i1","PER47_ARATH^PER47_ARATH^Q:1053-160,H:34-325^71.81%ID^E:4e-155^RecName: Full=Peroxidase 47;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35270_c0_g1_i1.p1","157-1134[-]","PER47_ARATH^PER47_ARATH^Q:11-325,H:18-325^68.89%ID^E:4e-157^RecName: Full=Peroxidase 47;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^48-287^E:2.9e-74",".",".","ENOG410XUVZ^peroxidase","KEGG:ath:AT4G33420`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44071_c2_g9","leaves S. yangii","roots S. yangii",-7.19247120974573,0,0,"TRINITY_DN44071_c2_g9_i3","LEC2_CLAKE^LEC2_CLAKE^Q:339-4,H:23-131^42.11%ID^E:2e-15^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN44071_c2_g9_i3.p1","1-453[-]","LEC2_CLAKE^LEC2_CLAKE^Q:39-150,H:23-131^42.11%ID^E:1e-15^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^58-150^E:2.4e-13",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN43637_c5_g1","leaves S. yangii","roots S. yangii",-7.35959521737627,0,0,"TRINITY_DN43637_c5_g1_i3","KIRO_ACTDE^KIRO_ACTDE^Q:1-351,H:34-150^58.12%ID^E:4e-34^RecName: Full=Kirola {ECO:0000303|PubMed:21309790};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia",".","TRINITY_DN43637_c5_g1_i3.p1","1-360[+]","KIRO_ACTDE^KIRO_ACTDE^Q:1-116,H:34-149^58.62%ID^E:2e-42^RecName: Full=Kirola {ECO:0000303|PubMed:21309790};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia","PF00407.16^Bet_v_1^Pathogenesis-related protein Bet v I family^3-116^E:2.2e-31",".",".",".",".","GO:0009607^biological_process^response to biotic stimulus`GO:0016068^biological_process^type I hypersensitivity","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".","."]
["TRINITY_DN47727_c2_g3","leaves S. yangii","roots S. yangii",-7.42708966045879,"0.000986244902144037","0.00140104166558399","TRINITY_DN47727_c2_g3_i3","EFR_ARATH^EFR_ARATH^Q:3-755,H:274-523^41.04%ID^E:3e-34^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:9-632,H:131-307^35.41%ID^E:2e-21^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:9-632,H:403-601^33.33%ID^E:3e-20^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:66-620,H:78-254^33.51%ID^E:2e-17^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:252-755,H:85-251^35.12%ID^E:6e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:9-491,H:451-602^32.3%ID^E:2e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:324-755,H:84-227^34.03%ID^E:1e-09^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47727_c2_g3_i3.p1","3-755[+]","EFR_ARATH^EFR_ARATH^Q:1-251,H:274-523^41.04%ID^E:1e-40^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:3-224,H:131-321^34.53%ID^E:1e-22^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:3-211,H:403-602^33.65%ID^E:1e-20^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:22-240,H:78-313^30.74%ID^E:4e-20^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:84-251,H:85-251^35.12%ID^E:3e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:108-251,H:84-227^34.03%ID^E:1e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`EFR_ARATH^EFR_ARATH^Q:3-140,H:475-603^30.43%ID^E:3e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^15-32^E:0.59`PF00560.30^LRR_1^Leucine Rich Repeat^18-40^E:0.14`PF13855.3^LRR_8^Leucine rich repeat^122-181^E:1.4e-07",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G20480`KO:K13428","GO:0012505^cellular_component^endomembrane system`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0019199^molecular_function^transmembrane receptor protein kinase activity`GO:0010204^biological_process^defense response signaling pathway, resistance gene-independent`GO:0016045^biological_process^detection of bacterium`GO:0002764^biological_process^immune response-regulating signaling pathway`GO:0009626^biological_process^plant-type hypersensitive response`GO:0010359^biological_process^regulation of anion channel activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47312_c1_g2","leaves S. yangii","roots S. yangii",-7.68000013570055,0,0,"TRINITY_DN47312_c1_g2_i2","THCAS_CANSA^THCAS_CANSA^Q:1700-264,H:32-540^44.79%ID^E:2e-133^RecName: Full=Tetrahydrocannabinolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis",".","TRINITY_DN47312_c1_g2_i2.p1","255-1787[-]","THCAS_CANSA^THCAS_CANSA^Q:30-508,H:32-540^44.79%ID^E:7e-141^RecName: Full=Tetrahydrocannabinolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis","PF01565.20^FAD_binding_4^FAD binding domain^77-213^E:4.3e-31`PF08031.9^BBE^Berberine and berberine like^448-506^E:1.3e-22","sigP:1^20^0.809^YES",".",".",".","GO:0048046^cellular_component^apoplast`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45722_c0_g5","leaves S. yangii","roots S. yangii",-8.64585053009747,0,0,"TRINITY_DN45722_c0_g5_i2","PIP21_ORYSJ^PIP21_ORYSJ^Q:3-341,H:178-290^92.92%ID^E:1e-68^RecName: Full=Probable aquaporin PIP2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45722_c0_g5_i2.p1","3-344[+]","PIP21_ORYSJ^PIP21_ORYSJ^Q:1-113,H:178-290^92.92%ID^E:2e-69^RecName: Full=Probable aquaporin PIP2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00230.17^MIP^Major intrinsic protein^1-94^E:5.4e-36",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:osa:4343122`KO:K09872","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005773^cellular_component^vacuole`GO:0015254^molecular_function^glycerol channel activity`GO:0015250^molecular_function^water channel activity`GO:0015793^biological_process^glycerol transport`GO:0034220^biological_process^ion transmembrane transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]

{"sheet":"(D) leaves SA_leaves SY_DEGs","index":3,"n_rows":365,"n_cols":21,"rows_kept":365}
["Table S3 (D). Differently expressed genes in the comparison between leaves of S. abrotanoides and leaves of S. yangii"]
[]
["Row.names","sampleA","sampleB","log2FoldChange","pvalue","padj","transcript_id","sprot_Top_BLASTX_hit","RNAMMER","prot_id","prot_coords","sprot_Top_BLASTP_hit","Pfam","SignalP","TmHMM","eggnog","Kegg","gene_ontology_blast","gene_ontology_pfam","transcript","peptide"]
["TRINITY_DN44323_c1_g1","leaves S. abrotanoides","leaves S. yangii",7.03069339101249,"0.000437769615180302","0.00132058681088056","TRINITY_DN44323_c1_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:4-330,H:713-817^47.71%ID^E:4e-24^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44323_c1_g1_i1.p1","1-330[+]","R1A6_SOLDE^R1A6_SOLDE^Q:2-110,H:713-817^47.71%ID^E:4e-24^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-100^E:3.4e-22",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47671_c3_g1","leaves S. abrotanoides","leaves S. yangii",6.99397478368809,0,0,"TRINITY_DN47671_c3_g1_i9","PP280_ARATH^PP280_ARATH^Q:3014-762,H:1-751^53.79%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g53360, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47671_c3_g1_i9.p1","735-3089[-]","PP280_ARATH^PP280_ARATH^Q:26-776,H:1-751^53.79%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At3g53360, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01535.17^PPR^PPR repeat^131-157^E:0.025`PF13041.3^PPR_2^PPR repeat family^157-204^E:2.3e-09`PF01535.17^PPR^PPR repeat^159-189^E:1.6e-05`PF01535.17^PPR^PPR repeat^232-258^E:0.039`PF01535.17^PPR^PPR repeat^260-289^E:3.6e-05`PF13041.3^PPR_2^PPR repeat family^359-407^E:8.9e-09`PF01535.17^PPR^PPR repeat^362-391^E:0.0006`PF01535.17^PPR^PPR repeat^464-490^E:0.86`PF01535.17^PPR^PPR repeat^537-560^E:0.0025`PF13041.3^PPR_2^PPR repeat family^562-610^E:1.8e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^562-609^E:2.5e-06`PF01535.17^PPR^PPR repeat^565-595^E:3.1e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^586-635^E:0.0021`PF01535.17^PPR^PPR repeat^600-627^E:0.023","sigP:1^17^0.651^YES",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT3G53360","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN123129_c0_g1","leaves S. abrotanoides","leaves S. yangii",5.91078333652731,"0.00400750834695169","0.00986874991478468","TRINITY_DN123129_c0_g1_i1","NLTP2_LENCU^NLTP2_LENCU^Q:39-395,H:1-117^50.42%ID^E:7e-29^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Lens",".","TRINITY_DN123129_c0_g1_i1.p1","39-398[+]","NLTP2_LENCU^NLTP2_LENCU^Q:1-119,H:1-117^50.42%ID^E:4e-30^RecName: Full=Non-specific lipid-transfer protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Lens","PF14368.3^LTP_2^Probable lipid transfer^8-107^E:3.6e-08`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^29-115^E:5.9e-07","sigP:1^25^0.839^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN45340_c6_g1","leaves S. abrotanoides","leaves S. yangii",5.58629190617637,"0.0128195960886264","0.0276342822724237","TRINITY_DN45340_c6_g1_i1","DRL4_ARATH^DRL4_ARATH^Q:65-550,H:1-169^34.3%ID^E:4e-20^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45340_c6_g1_i1.p1","2-553[+]","DRL4_ARATH^DRL4_ARATH^Q:22-183,H:1-169^34.3%ID^E:7e-20^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G50180","GO:0009506^cellular_component^plasmodesma`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN44071_c2_g9","leaves S. abrotanoides","leaves S. yangii",5.4821793573584,0,0,"TRINITY_DN44071_c2_g9_i3","LEC2_CLAKE^LEC2_CLAKE^Q:339-4,H:23-131^42.11%ID^E:2e-15^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN44071_c2_g9_i3.p1","1-453[-]","LEC2_CLAKE^LEC2_CLAKE^Q:39-150,H:23-131^42.11%ID^E:1e-15^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^58-150^E:2.4e-13",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN47595_c1_g1","leaves S. abrotanoides","leaves S. yangii",5.16970223073152,0,0,"TRINITY_DN47595_c1_g1_i10","LEC2_CLAKE^LEC2_CLAKE^Q:1210-701,H:23-194^41.81%ID^E:3e-33^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis`LEC2_CLAKE^LEC2_CLAKE^Q:662-486,H:234-290^45.76%ID^E:3e-33^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN47595_c1_g1_i10.p1","758-1360[-]","LEC2_CLAKE^LEC2_CLAKE^Q:51-198,H:23-171^41.56%ID^E:2e-21^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^70-198^E:1.4e-21",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN44384_c4_g2","leaves S. abrotanoides","leaves S. yangii",5.04916519166517,0,0,"TRINITY_DN44384_c4_g2_i2","FTSH6_ARATH^FTSH6_ARATH^Q:110-406,H:573-671^69.7%ID^E:2e-40^RecName: Full=ATP-dependent zinc metalloprotease FTSH 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44384_c4_g2_i2.p1","2-454[+]","FTSH2_ORYSJ^FTSH2_ORYSJ^Q:30-138,H:556-664^61.47%ID^E:6e-42^RecName: Full=ATP-dependent zinc metalloprotease FTSH 2, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF01434.15^Peptidase_M41^Peptidase family M41^34-127^E:2.2e-19",".",".","COG0465^Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)",".","GO:0009941^cellular_component^chloroplast envelope`GO:0009535^cellular_component^chloroplast thylakoid membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004176^molecular_function^ATP-dependent peptidase activity`GO:0046872^molecular_function^metal ion binding`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008237^molecular_function^metallopeptidase activity`GO:0010205^biological_process^photoinhibition`GO:0010206^biological_process^photosystem II repair`GO:0006508^biological_process^proteolysis`GO:0010304^biological_process^PSII associated light-harvesting complex II catabolic process`GO:0010027^biological_process^thylakoid membrane organization","GO:0004222^molecular_function^metalloendopeptidase activity`GO:0005524^molecular_function^ATP binding`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN44199_c5_g3","leaves S. abrotanoides","leaves S. yangii",5.04864049560059,0,0,"TRINITY_DN44199_c5_g3_i2","HSP83_IPONI^HSP83_IPONI^Q:998-3,H:15-343^88.86%ID^E:0^RecName: Full=Heat shock protein 83;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN44199_c5_g3_i2.p1","3-998[-]","HSP83_IPONI^HSP83_IPONI^Q:1-332,H:15-343^92.77%ID^E:0^RecName: Full=Heat shock protein 83;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF13589.3^HATPase_c_3^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^16-137^E:7.3e-10`PF02518.23^HATPase_c^Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase^18-172^E:1.8e-17`PF00183.15^HSP90^Hsp90 protein^175-332^E:2.6e-63",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN45410_c7_g1","leaves S. abrotanoides","leaves S. yangii",4.84158096568758,0,0,"TRINITY_DN45410_c7_g1_i1","HSP82_TOBAC^HSP82_TOBAC^Q:3-854,H:188-471^95.77%ID^E:9e-158^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN45410_c7_g1_i1.p1","3-947[+]","HS901_ARATH^HS901_ARATH^Q:1-314,H:388-700^91.4%ID^E:0^RecName: Full=Heat shock protein 90-1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00183.15^HSP90^Hsp90 protein^1-307^E:3.1e-137",".",".","COG0326^Molecular chaperone. Has ATPase activity (By similarity)","KEGG:ath:AT5G52640`KO:K04079","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0009816^biological_process^defense response to bacterium, incompatible interaction`GO:0006457^biological_process^protein folding","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN47004_c6_g6","leaves S. abrotanoides","leaves S. yangii",4.75677948685185,0,0,"TRINITY_DN47004_c6_g6_i1","HSP82_TOBAC^HSP82_TOBAC^Q:3-317,H:111-215^99.05%ID^E:8e-67^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47004_c6_g6_i1.p1","3-317[+]","HSP82_TOBAC^HSP82_TOBAC^Q:1-105,H:111-215^99.05%ID^E:7e-67^RecName: Full=Heat shock protein 82;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00183.15^HSP90^Hsp90 protein^1-105^E:2.9e-55",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress","GO:0005524^molecular_function^ATP binding`GO:0051082^molecular_function^unfolded protein binding`GO:0006457^biological_process^protein folding`GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN60375_c0_g1","leaves S. abrotanoides","leaves S. yangii",4.43527681333946,{"v":2713987820.78685,"d":"2.71E+09"},"0.000100774847902137","TRINITY_DN60375_c0_g1_i1","PM1_SOYBN^PM1_SOYBN^Q:567-385,H:13-73^70.49%ID^E:8e-20^RecName: Full=18 kDa seed maturation protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN60375_c0_g1_i1.p1","196-570[-]","PM1_SOYBN^PM1_SOYBN^Q:2-123,H:13-173^42.94%ID^E:1e-22^RecName: Full=18 kDa seed maturation protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF03760.12^LEA_1^Late embryogenesis abundant (LEA) group 1^3-66^E:3.8e-20",".",".","ENOG410YTH0^18 kDa seed maturation","KEGG:gmx:547828","GO:0009790^biological_process^embryo development","GO:0009790^biological_process^embryo development",".","."]
["TRINITY_DN46705_c0_g7","leaves S. abrotanoides","leaves S. yangii",3.56018040570684,"0.000229631693099096","0.000728014048564316","TRINITY_DN46705_c0_g7_i2","CXE17_ARATH^CXE17_ARATH^Q:941-345,H:97-308^42.06%ID^E:2e-39^RecName: Full=Probable carboxylesterase 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46705_c0_g7_i2.p1","234-1130[-]","CXE17_ARATH^CXE17_ARATH^Q:3-296,H:28-342^36.68%ID^E:9e-56^RecName: Full=Probable carboxylesterase 17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10340.6^DUF2424^Protein of unknown function (DUF2424)^55-184^E:4.8e-08`PF00135.25^COesterase^Carboxylesterase family^55-154^E:5.6e-06`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^62-275^E:1.8e-52",".",".","COG0657^alpha beta hydrolase fold-3 domain protein","KEGG:ath:AT5G16080","GO:0052689^molecular_function^carboxylic ester hydrolase activity","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46156_c1_g1","leaves S. abrotanoides","leaves S. yangii",3.29424426431531,0,0,"TRINITY_DN46156_c1_g1_i3","HSP7F_ARATH^HSP7F_ARATH^Q:2673-1054,H:36-583^86.68%ID^E:0^RecName: Full=Heat shock 70 kDa protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`HSP7F_ARATH^HSP7F_ARATH^Q:752-468,H:582-676^72.63%ID^E:3e-34^RecName: Full=Heat shock 70 kDa protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46156_c1_g1_i3.p1","967-2721[-]","HSP7F_ARATH^HSP7F_ARATH^Q:17-556,H:36-583^86.68%ID^E:0^RecName: Full=Heat shock 70 kDa protein 6, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00012.17^HSP70^Hsp70 protein^53-556^E:7.7e-240`PF06723.10^MreB_Mbl^MreB/Mbl protein^139-420^E:1.2e-17",".",".","COG0443^Heat shock protein","KEGG:ath:AT4G24280`KO:K03283","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0005739^cellular_component^mitochondrion`GO:0005634^cellular_component^nucleus`GO:0009579^cellular_component^thylakoid`GO:0005524^molecular_function^ATP binding`GO:0006457^biological_process^protein folding`GO:0045036^biological_process^protein targeting to chloroplast`GO:0046686^biological_process^response to cadmium ion`GO:0009409^biological_process^response to cold`GO:0016032^biological_process^viral process","GO:0000902^biological_process^cell morphogenesis",".","."]
["TRINITY_DN46808_c2_g1","leaves S. abrotanoides","leaves S. yangii",3.29301421577201,0,0,"TRINITY_DN46808_c2_g1_i2","LECS_STYJP^LECS_STYJP^Q:732-280,H:121-272^42.58%ID^E:9e-28^RecName: Full=Seed lectin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Sophora",".","TRINITY_DN46808_c2_g1_i2.p2","238-684[-]","LECS_STYJP^LECS_STYJP^Q:4-143,H:139-280^42.36%ID^E:2e-24^RecName: Full=Seed lectin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Sophora","PF00139.16^Lectin_legB^Legume lectin domain^4-137^E:6.8e-28",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN47656_c1_g5","leaves S. abrotanoides","leaves S. yangii",3.19265685787852,0,0,"TRINITY_DN47656_c1_g5_i1","WAKLH_ARATH^WAKLH_ARATH^Q:23-460,H:6-150^34.59%ID^E:1e-14^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47656_c1_g5_i1.p1","2-475[+]","WAKLH_ARATH^WAKLH_ARATH^Q:8-153,H:6-150^34.59%ID^E:1e-14^RecName: Full=Wall-associated receptor kinase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13947.3^GUB_WAK_bind^Wall-associated receptor kinase galacturonan-binding^41-146^E:1.8e-25","sigP:1^35^0.507^YES",".",".","KEGG:ath:AT1G69730","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030247^molecular_function^polysaccharide binding",".","."]
["TRINITY_DN35681_c0_g1","leaves S. abrotanoides","leaves S. yangii",3.17450368467435,0,0,"TRINITY_DN35681_c0_g1_i1","CHIA_PHAAN^CHIA_PHAAN^Q:1234-416,H:29-298^59.78%ID^E:6e-98^RecName: Full=Acidic endochitinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna",".","TRINITY_DN35681_c0_g1_i1.p1","356-1303[-]","CHIA_PHAAN^CHIA_PHAAN^Q:1-296,H:5-298^57.67%ID^E:6e-111^RecName: Full=Acidic endochitinase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna","PF00704.25^Glyco_hydro_18^Glycosyl hydrolases family 18^27-283^E:2.4e-24","sigP:1^24^0.888^YES",".",".",".","GO:0005615^cellular_component^extracellular space`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0000272^biological_process^polysaccharide catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47420_c2_g1","leaves S. abrotanoides","leaves S. yangii",3.11458432539849,0,0,"TRINITY_DN47420_c2_g1_i9","UGT8_CATRO^UGT8_CATRO^Q:348-1097,H:233-482^69.2%ID^E:3e-125^RecName: Full=7-deoxyloganetic acid glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus",".","TRINITY_DN47420_c2_g1_i9.p1","387-1100[+]","UGT8_CATRO^UGT8_CATRO^Q:1-237,H:246-482^70.04%ID^E:2e-121^RecName: Full=7-deoxyloganetic acid glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^42-171^E:3.2e-28",".",".",".",".","GO:0035251^molecular_function^UDP-glucosyltransferase activity`GO:1900994^biological_process^(-)-secologanin biosynthetic process","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN45286_c1_g3","leaves S. abrotanoides","leaves S. yangii",2.98900609653077,0,0,"TRINITY_DN45286_c1_g3_i2","GSTUJ_ARATH^GSTUJ_ARATH^Q:1077-760,H:1-106^78.3%ID^E:1e-77^RecName: Full=Glutathione S-transferase U19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSTUJ_ARATH^GSTUJ_ARATH^Q:679-338,H:106-219^64.91%ID^E:1e-77^RecName: Full=Glutathione S-transferase U19;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45286_c1_g3_i2.p1","739-1077[-]","GSTUK_ARATH^GSTUK_ARATH^Q:1-105,H:1-105^76.19%ID^E:3e-55^RecName: Full=Glutathione S-transferase U20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02798.17^GST_N^Glutathione S-transferase, N-terminal domain^5-76^E:1e-19`PF13417.3^GST_N_3^Glutathione S-transferase, N-terminal domain^7-80^E:7.2e-16`PF13409.3^GST_N_2^Glutathione S-transferase, N-terminal domain^13-76^E:1.3e-08",".",".","ENOG410XSIX^glutathione Stransferase","KEGG:ath:AT1G78370`KO:K00799","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:0019899^molecular_function^enzyme binding`GO:0004364^molecular_function^glutathione transferase activity`GO:0040008^biological_process^regulation of growth`GO:2000030^biological_process^regulation of response to red or far red light`GO:0009735^biological_process^response to cytokinin`GO:0009636^biological_process^response to toxic substance`GO:0009407^biological_process^toxin catabolic process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44351_c2_g1","leaves S. abrotanoides","leaves S. yangii",2.96064279437466,0,0,"TRINITY_DN44351_c2_g1_i1","E13H_TOBAC^E13H_TOBAC^Q:1231-275,H:36-339^50.78%ID^E:1e-88^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44351_c2_g1_i1.p1","272-1231[-]","E13H_TOBAC^E13H_TOBAC^Q:1-319,H:36-339^53.27%ID^E:3e-97^RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q';^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^2-318^E:6.1e-90",".",".",".",".","GO:0048046^cellular_component^apoplast`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN45073_c1_g1","leaves S. abrotanoides","leaves S. yangii",2.92974903193885,0,0,"TRINITY_DN45073_c1_g1_i2","SAG21_ARATH^SAG21_ARATH^Q:102-377,H:1-96^53.12%ID^E:5e-22^RecName: Full=Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial {ECO:0000303|PubMed:9617813};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45073_c1_g1_i2.p1","3-392[+]","SAG21_ARATH^SAG21_ARATH^Q:34-125,H:1-96^53.12%ID^E:1e-23^RecName: Full=Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial {ECO:0000303|PubMed:9617813};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03242.10^LEA_3^Late embryogenesis abundant protein^34-121^E:1.4e-30",".",".","ENOG410ZEWF^late embryogenesis abundant protein","KEGG:ath:AT4G02380","GO:0005739^cellular_component^mitochondrion`GO:0042631^biological_process^cellular response to water deprivation`GO:0009409^biological_process^response to cold`GO:0006979^biological_process^response to oxidative stress`GO:0000302^biological_process^response to reactive oxygen species","GO:0006950^biological_process^response to stress",".","."]
["TRINITY_DN46808_c2_g2","leaves S. abrotanoides","leaves S. yangii",2.83492611621357,0,0,"TRINITY_DN46808_c2_g2_i1","LEC2_CLAKE^LEC2_CLAKE^Q:835-395,H:137-288^37.82%ID^E:7e-20^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN46808_c2_g2_i1.p1","386-841[-]","LEC2_CLAKE^LEC2_CLAKE^Q:3-149,H:137-288^37.82%ID^E:5e-21^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^20-140^E:2.4e-25",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN40879_c0_g1","leaves S. abrotanoides","leaves S. yangii",2.48698576300554,"0.000107902317084277","0.000363300611132371","TRINITY_DN40879_c0_g1_i1","BCP_PEA^BCP_PEA^Q:627-334,H:24-122^48.48%ID^E:1e-24^RecName: Full=Blue copper protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN40879_c0_g1_i1.p1","154-690[-]","BCP_PEA^BCP_PEA^Q:22-119,H:24-122^48.48%ID^E:1e-25^RecName: Full=Blue copper protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF02298.14^Cu_bind_like^Plastocyanin-like domain^34-113^E:4.2e-22","sigP:1^22^0.808^YES",".",".",".","GO:0009055^molecular_function^electron carrier activity`GO:0046872^molecular_function^metal ion binding`GO:0055114^biological_process^oxidation-reduction process","GO:0009055^molecular_function^electron carrier activity",".","."]
["TRINITY_DN46263_c0_g1","leaves S. abrotanoides","leaves S. yangii",2.38410956852254,"0.000125742805724512","0.000418450840875061","TRINITY_DN46263_c0_g1_i14","AP2_ARATH^AP2_ARATH^Q:649-1284,H:61-290^79.13%ID^E:8e-105^RecName: Full=Floral homeotic protein APETALA 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46263_c0_g1_i14.p1","541-1299[+]","AP2_ARATH^AP2_ARATH^Q:1-248,H:1-290^66.78%ID^E:7e-112^RecName: Full=Floral homeotic protein APETALA 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AP2_ARATH^AP2_ARATH^Q:69-157,H:203-292^43.96%ID^E:5e-09^RecName: Full=Floral homeotic protein APETALA 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^88-137^E:2.2e-08`PF00847.17^AP2^AP2 domain^180-230^E:2.9e-09",".",".","ENOG410YBZ8^floral homeotic protein APETALA","KEGG:ath:AT4G36920`KO:K09284","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0030154^biological_process^cell differentiation`GO:0009908^biological_process^flower development`GO:0010073^biological_process^meristem maintenance`GO:0048481^biological_process^plant ovule development`GO:0048316^biological_process^seed development`GO:0010093^biological_process^specification of floral organ identity`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43789_c1_g4","leaves S. abrotanoides","leaves S. yangii",2.35528360252109,{"v":5563924302.48832,"d":"5.56E+09"},"0.000195999998958648","TRINITY_DN43789_c1_g4_i2","CESA4_ORYSJ^CESA4_ORYSJ^Q:2232-1192,H:458-797^82.71%ID^E:0^RecName: Full=Cellulose synthase A catalytic subunit 4 [UDP-forming];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`CESA4_ORYSJ^CESA4_ORYSJ^Q:1114-518,H:792-989^80.4%ID^E:0^RecName: Full=Cellulose synthase A catalytic subunit 4 [UDP-forming];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43789_c1_g4_i2.p2","515-1063[-]","CESA8_ARATH^CESA8_ARATH^Q:1-182,H:804-985^81.32%ID^E:2e-101^RecName: Full=Cellulose synthase A catalytic subunit 8 [UDP-forming];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03552.11^Cellulose_synt^Cellulose synthase^1-172^E:7.1e-90",".",".","COG1215^Glycosyl transferase, family 2","KEGG:ath:AT4G18780`KO:K10999","GO:0005618^cellular_component^cell wall`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0046872^molecular_function^metal ion binding`GO:0071555^biological_process^cell wall organization`GO:0030244^biological_process^cellulose biosynthetic process`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:0009834^biological_process^plant-type secondary cell wall biogenesis`GO:0006970^biological_process^response to osmotic stress`GO:0009414^biological_process^response to water deprivation","GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0030244^biological_process^cellulose biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46542_c2_g5","leaves S. abrotanoides","leaves S. yangii",2.31763911949257,{"v":4441756520.09103,"d":"4.44E+09"},"0.000159279984302474","TRINITY_DN46542_c2_g5_i1","PER66_ARATH^PER66_ARATH^Q:167-1030,H:12-300^68.51%ID^E:9e-137^RecName: Full=Peroxidase 66;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46542_c2_g5_i1.p1","137-1099[+]","PER66_ARATH^PER66_ARATH^Q:11-320,H:12-322^67.52%ID^E:1e-154^RecName: Full=Peroxidase 66;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^42-286^E:1.4e-72","sigP:1^24^0.751^YES",".","ENOG410YFBY^peroxidase","KEGG:ath:AT5G51890`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0098869^biological_process^cellular oxidant detoxification`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43209_c3_g3","leaves S. abrotanoides","leaves S. yangii",2.31176811808038,{"v":4836784493.86937,"d":"4.84E+09"},"0.000172141460558208","TRINITY_DN43209_c3_g3_i3","RL192_ARATH^RL192_ARATH^Q:14-508,H:2-166^68.48%ID^E:6e-61^RecName: Full=60S ribosomal protein L19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43209_c3_g3_i3.p1","2-595[+]","RL192_ARATH^RL192_ARATH^Q:5-185,H:2-182^67.96%ID^E:2e-80^RecName: Full=60S ribosomal protein L19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01280.17^Ribosomal_L19e^Ribosomal protein L19e^8-149^E:5e-63",".",".","COG2147^ribosomal protein L19","KEGG:ath:AT3G16780`KO:K02885","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0005886^cellular_component^plasma membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN43010_c0_g1","leaves S. abrotanoides","leaves S. yangii",2.30027825313204,"0.000122332606462599","0.000408287886743814","TRINITY_DN43010_c0_g1_i1","INV1_DAUCA^INV1_DAUCA^Q:1892-225,H:35-592^69.46%ID^E:0^RecName: Full=Beta-fructofuranosidase, insoluble isoenzyme 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus",".","TRINITY_DN43010_c0_g1_i1.p1","219-1985[-]","INV1_DAUCA^INV1_DAUCA^Q:17-587,H:20-592^68.35%ID^E:0^RecName: Full=Beta-fructofuranosidase, insoluble isoenzyme 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus","PF00251.17^Glyco_hydro_32N^Glycosyl hydrolases family 32 N-terminal domain^61-379^E:6.9e-105`PF08244.9^Glyco_hydro_32C^Glycosyl hydrolases family 32 C terminal^456-540^E:3.7e-15",".",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0004575^molecular_function^sucrose alpha-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process",".",".","."]
["TRINITY_DN38586_c0_g2","leaves S. abrotanoides","leaves S. yangii",2.14476935582585,{"v":5632337199.89085,"d":"5.63E+09"},"0.000198154699637108","TRINITY_DN38586_c0_g2_i1","EPFL9_ARATH^EPFL9_ARATH^Q:206-376,H:46-102^80.7%ID^E:3e-27^RecName: Full=EPIDERMAL PATTERNING FACTOR-like protein 9 {ECO:0000303|PubMed:19435754};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38586_c0_g2_i1.p1","77-379[+]","EPFL9_ARATH^EPFL9_ARATH^Q:44-100,H:46-102^80.7%ID^E:7e-29^RecName: Full=EPIDERMAL PATTERNING FACTOR-like protein 9 {ECO:0000303|PubMed:19435754};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16851.2^Stomagen^Stomagen^51-99^E:4.5e-32","sigP:1^22^0.764^YES",".","ENOG410Z51E^NA","KEGG:ath:AT4G12970","GO:0048046^cellular_component^apoplast`GO:0019901^molecular_function^protein kinase binding`GO:0007267^biological_process^cell-cell signaling`GO:0010052^biological_process^guard cell differentiation`GO:2000123^biological_process^positive regulation of stomatal complex development`GO:2000038^biological_process^regulation of stomatal complex development`GO:0010374^biological_process^stomatal complex development`GO:0010375^biological_process^stomatal complex patterning","GO:2000123^biological_process^positive regulation of stomatal complex development",".","."]
["TRINITY_DN45742_c0_g2","leaves S. abrotanoides","leaves S. yangii",2.14028853093099,"0.000154160646453539","0.00050499381914839","TRINITY_DN45742_c0_g2_i1","R1A3_SOLDE^R1A3_SOLDE^Q:2-748,H:90-337^39.29%ID^E:4e-48^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45742_c0_g2_i1.p1","119-931[+]","R1A6_SOLDE^R1A6_SOLDE^Q:1-227,H:634-883^35.86%ID^E:2e-45^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^1-119^E:2e-27",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN8456_c0_g1","leaves S. abrotanoides","leaves S. yangii",2.12115061720724,"0.000170367145476046","0.000553172416581484","TRINITY_DN8456_c0_g1_i1","ARFR_ORYSJ^ARFR_ORYSJ^Q:71-1222,H:299-699^54.09%ID^E:2e-124^RecName: Full=Auxin response factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN8456_c0_g1_i1.p1","2-1228[+]","ARFR_ORYSJ^ARFR_ORYSJ^Q:4-406,H:279-698^54.5%ID^E:1e-140^RecName: Full=Auxin response factor 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF06507.10^Auxin_resp^Auxin response factor^17-100^E:6.1e-32",".",".","ENOG410ZZ2C^auxin response factor","KEGG:osa:4341882","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009725^biological_process^response to hormone`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN43509_c0_g2","leaves S. abrotanoides","leaves S. yangii",2.11870590136567,"0.000149379336830084","0.000491030446880774","TRINITY_DN43509_c0_g2_i1","NEP1_NEPGR^NEP1_NEPGR^Q:1546-296,H:21-434^52.62%ID^E:3e-122^RecName: Full=Aspartic proteinase nepenthesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Nepenthaceae; Nepenthes",".","TRINITY_DN43509_c0_g2_i1.p1","284-1606[-]","NEP1_NEPGR^NEP1_NEPGR^Q:1-437,H:1-434^52.38%ID^E:3e-155^RecName: Full=Aspartic proteinase nepenthesin-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Nepenthaceae; Nepenthes","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^96-259^E:1.4e-51`PF00026.20^Asp^Eukaryotic aspartyl protease^96-148^E:3.5e-07`PF00026.20^Asp^Eukaryotic aspartyl protease^175-432^E:2.5e-12`PF14541.3^TAXi_C^Xylanase inhibitor C-terminal^284-432^E:1.1e-36","sigP:1^24^0.843^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0004190^molecular_function^aspartic-type endopeptidase activity",".",".","."]
["TRINITY_DN40463_c0_g1","leaves S. abrotanoides","leaves S. yangii",2.0985713512136,"0.000272196964812899","0.000851065007443433","TRINITY_DN40463_c0_g1_i4","PRI2_ARATH^PRI2_ARATH^Q:194-1534,H:1-449^70.89%ID^E:0^RecName: Full=Probable DNA primase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40463_c0_g1_i4.p1","194-1558[+]","PRI2_ARATH^PRI2_ARATH^Q:1-447,H:1-449^70.89%ID^E:0^RecName: Full=Probable DNA primase large subunit;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04104.11^DNA_primase_lrg^Eukaryotic and archaeal DNA primase, large subunit^171-436^E:1e-94",".",".",".",".","GO:1990077^cellular_component^primosome complex`GO:0051539^molecular_function^4 iron, 4 sulfur cluster binding`GO:0003677^molecular_function^DNA binding`GO:0003896^molecular_function^DNA primase activity`GO:0046872^molecular_function^metal ion binding","GO:0003896^molecular_function^DNA primase activity`GO:0006269^biological_process^DNA replication, synthesis of RNA primer",".","."]
["TRINITY_DN47018_c0_g3","leaves S. abrotanoides","leaves S. yangii",2.09809536341647,{"v":6037241051.73592,"d":"6.04E+09"},"0.000211138590845644","TRINITY_DN47018_c0_g3_i1","ATL80_ARATH^ATL80_ARATH^Q:226-615,H:26-164^68.35%ID^E:2e-47^RecName: Full=RING-H2 finger protein ATL80;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47018_c0_g3_i1.p1","136-705[+]","ATL80_ARATH^ATL80_ARATH^Q:6-160,H:7-164^63.41%ID^E:5e-64^RecName: Full=RING-H2 finger protein ATL80;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^106-149^E:2.1e-14`PF17123.2^zf-RING_11^RING-like zinc finger^106-135^E:2e-12`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^107-148^E:9.8e-10`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^107-148^E:8e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^107-146^E:2.1e-05`PF12861.4^zf-ANAPC11^Anaphase-promoting complex subunit 11 RING-H2 finger^115-155^E:2.7e-06`PF12678.4^zf-rbx1^RING-H2 zinc finger domain^116-149^E:1.1e-07",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT1G20823","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0061630^molecular_function^ubiquitin protein ligase activity`GO:0008270^molecular_function^zinc ion binding`GO:0070417^biological_process^cellular response to cold`GO:0006952^biological_process^defense response`GO:0009909^biological_process^regulation of flower development`GO:0010966^biological_process^regulation of phosphate transport`GO:0010200^biological_process^response to chitin","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0005680^cellular_component^anaphase-promoting complex",".","."]
["TRINITY_DN46854_c4_g2","leaves S. abrotanoides","leaves S. yangii",2.08100192100837,"0.000259556648043519","0.000815289448139005","TRINITY_DN46854_c4_g2_i3","WRKY9_ARATH^WRKY9_ARATH^Q:1137-403,H:97-360^46.01%ID^E:1e-62^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46854_c4_g2_i3.p1","79-1275[-]","WRKY9_ARATH^WRKY9_ARATH^Q:47-291,H:97-360^46.01%ID^E:7e-64^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^177-235^E:6.7e-27",".",".","ENOG410Y9PF^WRKY transcription factor","KEGG:ath:AT1G68150","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN39759_c0_g1","leaves S. abrotanoides","leaves S. yangii",2.06385724871698,"0.000209463342701855","0.000669434144134771","TRINITY_DN39759_c0_g1_i2","GT14A_ARATH^GT14A_ARATH^Q:1225-581,H:240-447^39.11%ID^E:1e-59^RecName: Full=Beta-glucuronosyltransferase GlcAT14A {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GT14A_ARATH^GT14A_ARATH^Q:1724-1317,H:97-232^44.12%ID^E:1e-59^RecName: Full=Beta-glucuronosyltransferase GlcAT14A {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39759_c0_g1_i2.p1","548-1318[-]","GT14A_ARATH^GT14A_ARATH^Q:32-246,H:240-447^39.11%ID^E:2e-45^RecName: Full=Beta-glucuronosyltransferase GlcAT14A {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02485.18^Branch^Core-2/I-Branching enzyme^35-135^E:1.2e-18",".",".","ENOG410XQ7M^Glucosaminyl (N-acetyl) transferase","KEGG:ath:AT5G39990","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0008375^molecular_function^acetylglucosaminyltransferase activity`GO:0015020^molecular_function^glucuronosyltransferase activity`GO:0016049^biological_process^cell growth","GO:0008375^molecular_function^acetylglucosaminyltransferase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN37364_c0_g1","leaves S. abrotanoides","leaves S. yangii",2.06029080724801,0,0,"TRINITY_DN37364_c0_g1_i2","HS22M_PEA^HS22M_PEA^Q:757-1179,H:60-202^62.24%ID^E:7e-51^RecName: Full=Heat shock 22 kDa protein, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN37364_c0_g1_i2.p1","784-1182[+]","HS22M_PEA^HS22M_PEA^Q:1-132,H:69-202^65.67%ID^E:3e-54^RecName: Full=Heat shock 22 kDa protein, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00011.18^HSP20^Hsp20/alpha crystallin family^36-130^E:3.8e-18`PF04969.13^CS^CS domain^39-86^E:0.47",".",".",".",".","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN43147_c2_g5","leaves S. abrotanoides","leaves S. yangii",2.05635765101191,"0.000496912526740236","0.0014814642510689","TRINITY_DN43147_c2_g5_i1","CESA7_ARATH^CESA7_ARATH^Q:3-1853,H:409-1026^89.16%ID^E:0^RecName: Full=Cellulose synthase A catalytic subunit 7 [UDP-forming];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43147_c2_g5_i1.p1","72-1856[+]","CESA7_ARATH^CESA7_ARATH^Q:2-594,H:433-1026^88.89%ID^E:0^RecName: Full=Cellulose synthase A catalytic subunit 7 [UDP-forming];^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03552.11^Cellulose_synt^Cellulose synthase^2-588^E:0`PF13632.3^Glyco_trans_2_3^Glycosyl transferase family group 2^285-416^E:6.5e-08",".",".","COG1215^Glycosyl transferase, family 2","KEGG:ath:AT5G17420`KO:K10999","GO:0009507^cellular_component^chloroplast`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0008270^molecular_function^zinc ion binding`GO:0030244^biological_process^cellulose biosynthetic process`GO:0009832^biological_process^plant-type cell wall biogenesis`GO:0009834^biological_process^plant-type secondary cell wall biogenesis`GO:0010400^biological_process^rhamnogalacturonan I side chain metabolic process","GO:0016760^molecular_function^cellulose synthase (UDP-forming) activity`GO:0030244^biological_process^cellulose biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46291_c2_g1","leaves S. abrotanoides","leaves S. yangii",2.04303141250005,{"v":5815924291.12163,"d":"5.82E+09"},"0.000203988298187633","TRINITY_DN46291_c2_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:1101-3083,H:526-1207^30.37%ID^E:9e-73^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46291_c2_g1_i1.p1","528-3101[+]","R1A6_SOLDE^R1A6_SOLDE^Q:140-852,H:481-1207^30%ID^E:1e-76^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^199-474^E:1.4e-72",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46035_c3_g1","leaves S. abrotanoides","leaves S. yangii",2.01473374613556,{"v":5032086996.04478,"d":"5.03E+09"},"0.000178508736154902","TRINITY_DN46035_c3_g1_i6","WAKLL_ARATH^WAKLL_ARATH^Q:10-423,H:323-448^43.45%ID^E:1e-22^RecName: Full=Putative wall-associated receptor kinase-like 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46035_c3_g1_i6.p1","1-423[+]","WAKLL_ARATH^WAKLL_ARATH^Q:4-141,H:323-448^43.45%ID^E:2e-22^RecName: Full=Putative wall-associated receptor kinase-like 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07645.12^EGF_CA^Calcium-binding EGF domain^22-62^E:1.5e-07",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G17910","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN44770_c3_g2","leaves S. abrotanoides","leaves S. yangii",1.99380628719276,{"v":4224404919.96613,"d":"4.22E+09"},"0.000151936228489168","TRINITY_DN44770_c3_g2_i1","GDL38_ARATH^GDL38_ARATH^Q:1268-159,H:15-387^71.05%ID^E:0^RecName: Full=GDSL esterase/lipase At2g23540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44770_c3_g2_i1.p1","156-1280[-]","GDL38_ARATH^GDL38_ARATH^Q:5-374,H:15-387^71.05%ID^E:0^RecName: Full=GDSL esterase/lipase At2g23540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^37-355^E:4.2e-18","sigP:1^25^0.555^YES",".","ENOG410ZH2N^GDSL esterase lipase","KEGG:ath:AT2G23540","GO:0005576^cellular_component^extracellular region`GO:0016788^molecular_function^hydrolase activity, acting on ester bonds`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN20405_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.98051881804493,"0.000743141936636024","0.00214036673654931","TRINITY_DN20405_c0_g1_i1","RNLX_SOLLC^RNLX_SOLLC^Q:53-742,H:1-233^68.67%ID^E:6e-109^RecName: Full=Intracellular ribonuclease LX;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN20405_c0_g1_i1.p1","2-760[+]","RNLX_SOLLC^RNLX_SOLLC^Q:18-247,H:1-233^68.67%ID^E:4e-120^RecName: Full=Intracellular ribonuclease LX;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00445.15^Ribonuclease_T2^Ribonuclease T2 family^46-224^E:4.6e-58",".",".","ENOG4111M7G^ribonuclease T2 activity","KEGG:sly:544193`KO:K01166","GO:0005737^cellular_component^cytoplasm`GO:0033897^molecular_function^ribonuclease T2 activity`GO:0003723^molecular_function^RNA binding","GO:0003723^molecular_function^RNA binding`GO:0033897^molecular_function^ribonuclease T2 activity",".","."]
["TRINITY_DN34768_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.97796746035559,"0.000130336258877996","0.000432898537926564","TRINITY_DN34768_c1_g1_i3","ANX1_ARATH^ANX1_ARATH^Q:1972-1094,H:497-794^51.16%ID^E:5e-88^RecName: Full=Receptor-like protein kinase ANXUR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ANX1_ARATH^ANX1_ARATH^Q:955-281,H:507-741^32.11%ID^E:3e-21^RecName: Full=Receptor-like protein kinase ANXUR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN34768_c1_g1_i3.p1","161-1975[-]","ANX1_ARATH^ANX1_ARATH^Q:2-294,H:497-794^51.16%ID^E:9e-90^RecName: Full=Receptor-like protein kinase ANXUR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ANX1_ARATH^ANX1_ARATH^Q:341-604,H:507-792^30.64%ID^E:5e-24^RecName: Full=Receptor-like protein kinase ANXUR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^28-284^E:2.7e-49`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^31-287^E:1.1e-49`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^381-599^E:7.2e-33`PF00069.22^Pkinase^Protein kinase domain^381-597^E:5.5e-23",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G04690","GO:0016324^cellular_component^apical plasma membrane`GO:0016021^cellular_component^integral component of membrane`GO:0090404^cellular_component^pollen tube tip`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0007338^biological_process^single fertilization","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN20762_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.96420285857591,"0.000852628523712429","0.00242554657372804","TRINITY_DN20762_c0_g1_i1","DRE1D_ARATH^DRE1D_ARATH^Q:1097-438,H:29-220^44.64%ID^E:1e-36^RecName: Full=Dehydration-responsive element-binding protein 1D;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN20762_c0_g1_i1.p1","429-1157[-]","DRE1D_ARATH^DRE1D_ARATH^Q:21-240,H:29-220^44.64%ID^E:1e-46^RecName: Full=Dehydration-responsive element-binding protein 1D;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^44-94^E:5.5e-11",".",".","ENOG410YK37^dehydration-responsive element-binding protein","KEGG:ath:AT5G51990","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46287_c2_g10","leaves S. abrotanoides","leaves S. yangii",1.96296777678688,{"v":4799203840.60953,"d":"4.80E+09"},"0.000170887758667918","TRINITY_DN46287_c2_g10_i6","PDR1_TOBAC^PDR1_TOBAC^Q:3326-1401,H:9-652^73.14%ID^E:0^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:1351-2,H:644-1071^70.33%ID^E:2e-180^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:2831-1422,H:864-1296^23.87%ID^E:3e-22^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:661-20,H:164-410^25.91%ID^E:1e-12^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN46287_c2_g10_i6.p1","1377-3326[-]","PDR1_TOBAC^PDR1_TOBAC^Q:1-642,H:9-652^73.14%ID^E:0^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana`PDR1_TOBAC^PDR1_TOBAC^Q:166-635,H:864-1296^23.87%ID^E:8e-23^RecName: Full=Pleiotropic drug resistance protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF14510.3^ABC_trans_N^ABC-transporter extracellular N-terminal^80-142^E:2.5e-12`PF00005.24^ABC_tran^ABC transporter^167-349^E:6.9e-14`PF01061.21^ABC2_membrane^ABC-2 type transporter^503-647^E:1.1e-19",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0006810^biological_process^transport","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44390_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.96161386304042,{"v":4073140258.37653,"d":"4.07E+09"},"0.000146908325303778","TRINITY_DN44390_c1_g1_i1","DR206_PEA^DR206_PEA^Q:70-573,H:16-184^62.13%ID^E:3e-74^RecName: Full=Disease resistance response protein 206;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN44390_c1_g1_i1.p1","1-576[+]","DR206_PEA^DR206_PEA^Q:9-191,H:1-184^58.15%ID^E:8e-76^RecName: Full=Disease resistance response protein 206;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF03018.11^Dirigent^Dirigent-like protein^38-185^E:2.6e-37","sigP:1^24^0.885^YES",".",".",".","GO:0048046^cellular_component^apoplast`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN45361_c1_g4","leaves S. abrotanoides","leaves S. yangii",1.96021020399854,"0.000582696388392537","0.00171223092589192","TRINITY_DN45361_c1_g4_i2","BH030_ARATH^BH030_ARATH^Q:331-894,H:161-349^43.94%ID^E:1e-32^RecName: Full=Transcription factor bHLH30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45361_c1_g4_i2.p1","151-909[+]","BH030_ARATH^BH030_ARATH^Q:61-248,H:161-349^43.94%ID^E:1e-33^RecName: Full=Transcription factor bHLH30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^77-122^E:3.4e-10",".",".","ENOG410YEFC^Transcription factor","KEGG:ath:AT1G68810","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN43818_c2_g1","leaves S. abrotanoides","leaves S. yangii",1.94690247871555,"0.000968076268674589","0.00272583637322132","TRINITY_DN43818_c2_g1_i2","NC100_ARATH^NC100_ARATH^Q:3-659,H:97-336^41.15%ID^E:4e-45^RecName: Full=NAC domain-containing protein 100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43818_c2_g1_i2.p1","3-662[+]","NC100_ARATH^NC100_ARATH^Q:1-219,H:97-336^41.15%ID^E:7e-48^RecName: Full=NAC domain-containing protein 100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^1-45^E:9.7e-08",".",".","ENOG410Y9QZ^NAC domain-containing protein","KEGG:ath:AT5G61430","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN45904_c2_g5","leaves S. abrotanoides","leaves S. yangii",1.9291059855605,{"v":4621100627.07056,"d":"4.62E+09"},"0.000165058800941329","TRINITY_DN45904_c2_g5_i7","ENOX_SOLLC^ENOX_SOLLC^Q:147-1106,H:70-388^67.5%ID^E:2e-125^RecName: Full=2-methylene-furan-3-one reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45904_c2_g5_i7.p1","174-1109[+]","QORL_ARATH^QORL_ARATH^Q:2-311,H:78-386^65.81%ID^E:7e-144^RecName: Full=Quinone oxidoreductase-like protein At1g23740, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^30-91^E:1e-09`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^162-250^E:2.4e-14`PF13602.3^ADH_zinc_N_2^Zinc-binding dehydrogenase^195-307^E:3.7e-19",".",".","COG0604^alcohol dehydrogenase","KEGG:ath:AT1G23740`KO:K18980","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0010319^cellular_component^stromule`GO:0009579^cellular_component^thylakoid`GO:0035798^molecular_function^2-alkenal reductase (NADP+) activity`GO:0035671^molecular_function^enone reductase activity`GO:0008270^molecular_function^zinc ion binding`GO:0055114^biological_process^oxidation-reduction process`GO:0009409^biological_process^response to cold","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47716_c1_g4","leaves S. abrotanoides","leaves S. yangii",1.92340508102067,"0.00169005616269907","0.00452635705862356","TRINITY_DN47716_c1_g4_i1","POLX_TOBAC^POLX_TOBAC^Q:364-1278,H:413-714^48.22%ID^E:3e-82^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47716_c1_g4_i1.p1","898-1533[+]","POLX_TOBAC^POLX_TOBAC^Q:1-127,H:588-714^51.54%ID^E:1e-30^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration",".",".","."]
["TRINITY_DN120528_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.92263666504225,{"v":5513889321.51867,"d":"5.51E+09"},"0.000194302356508735","TRINITY_DN120528_c0_g1_i1","AX15A_SOYBN^AX15A_SOYBN^Q:450-247,H:15-81^77.94%ID^E:1e-29^RecName: Full=Auxin-induced protein 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN120528_c0_g1_i1.p1","232-573[-]","AX15A_SOYBN^AX15A_SOYBN^Q:40-109,H:13-81^75.71%ID^E:6e-32^RecName: Full=Auxin-induced protein 15A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF02519.11^Auxin_inducible^Auxin responsive protein^34-107^E:3.4e-26",".",".","ENOG410Z28U^auxin-induced protein",".","GO:0009734^biological_process^auxin-activated signaling pathway","GO:0009733^biological_process^response to auxin",".","."]
["TRINITY_DN40369_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.91030214248458,"0.000205554483893426","0.00065800401827337","TRINITY_DN40369_c0_g1_i3","E133_ARATH^E133_ARATH^Q:242-1591,H:23-460^41.5%ID^E:5e-118^RecName: Full=Glucan endo-1,3-beta-glucosidase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40369_c0_g1_i3.p1","569-1564[+]","ALL9_OLEEU^ALL9_OLEEU^Q:1-330,H:140-460^43.94%ID^E:4e-86^RecName: Full=Glucan endo-1,3-beta-D-glucosidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^1-209^E:1.7e-61`PF07983.10^X8^X8 domain^240-311^E:1.2e-23",".",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47525_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.90719433320575,"0.00181233709016965","0.00481888237896616","TRINITY_DN47525_c1_g1_i1","CML31_ORYSJ^CML31_ORYSJ^Q:484-89,H:15-151^51.82%ID^E:1e-27^RecName: Full=Probable calcium-binding protein CML31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN47525_c1_g1_i1.p2","83-502[-]","CML31_ORYSJ^CML31_ORYSJ^Q:7-138,H:15-151^51.82%ID^E:4e-40^RecName: Full=Probable calcium-binding protein CML31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF13499.3^EF-hand_7^EF-hand domain pair^3-63^E:3.4e-10`PF13202.3^EF-hand_5^EF hand^7-28^E:1.9e-06`PF13833.3^EF-hand_8^EF-hand domain pair^21-66^E:2e-07`PF13202.3^EF-hand_5^EF hand^47-64^E:0.076`PF13499.3^EF-hand_7^EF-hand domain pair^74-136^E:5e-08`PF13833.3^EF-hand_8^EF-hand domain pair^88-136^E:3.1e-08`PF13202.3^EF-hand_5^EF hand^115-135^E:0.063",".",".","COG5126^Calcium-binding protein","KEGG:osa:4325408`KO:K13448","GO:0005509^molecular_function^calcium ion binding","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN46412_c3_g2","leaves S. abrotanoides","leaves S. yangii",1.90227022382028,{"v":473742301.15647,"d":"4.74E+08"},"0.000168908872857065","TRINITY_DN46412_c3_g2_i1","H4_SOYBN^H4_SOYBN^Q:435-190,H:22-103^100%ID^E:2e-49^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46412_c3_g2_i1.p1","187-498[-]","H4_SOYBN^H4_SOYBN^Q:1-103,H:1-103^100%ID^E:1e-65^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF15511.3^CENP-T_C^Centromere kinetochore component CENP-T histone fold^35-96^E:1.4e-08`PF02969.14^TAF^TATA box binding protein associated factor (TAF)^35-92^E:0.00016",".",".","COG2036^Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling","KEGG:gmx:100305586`KEGG:gmx:100777359`KEGG:gmx:100778317`KEGG:gmx:100784085`KEGG:gmx:100784197`KEGG:gmx:100793106`KEGG:gmx:100799680`KEGG:gmx:100800769`KEGG:gmx:100805597`KEGG:gmx:100818211`KEGG:gmx:100818748`KEGG:gmx:100819286`KO:K11254","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0009579^cellular_component^thylakoid`GO:0005774^cellular_component^vacuolar membrane`GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly","GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN44589_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.88066302524421,{"v":3087081438.61888,"d":"3.09E+09"},"0.000113601675248416","TRINITY_DN44589_c0_g1_i3","CSE_ARATH^CSE_ARATH^Q:16-246,H:225-301^44.16%ID^E:3e-15^RecName: Full=Caffeoylshikimate esterase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44589_c0_g1_i3.p1","1-420[+]","CSE_ARATH^CSE_ARATH^Q:6-82,H:225-301^44.16%ID^E:1e-15^RecName: Full=Caffeoylshikimate esterase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12146.5^Hydrolase_4^Serine aminopeptidase, S33^2-85^E:6.2e-23",".",".","COG2267^alpha beta hydrolase fold","KEGG:ath:AT1G52760`KO:K18368","GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0003846^molecular_function^2-acylglycerol O-acyltransferase activity`GO:0090430^molecular_function^caffeoyl-CoA: alcohol caffeoyl transferase activity`GO:0016787^molecular_function^hydrolase activity`GO:0004622^molecular_function^lysophospholipase activity`GO:0009809^biological_process^lignin biosynthetic process`GO:0006629^biological_process^lipid metabolic process`GO:0046686^biological_process^response to cadmium ion`GO:0042542^biological_process^response to hydrogen peroxide`GO:0006979^biological_process^response to oxidative stress`GO:0010043^biological_process^response to zinc ion",".",".","."]
["TRINITY_DN47649_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.86920151849571,"0.000172488853737369","0.000559310841590093","TRINITY_DN47649_c0_g1_i19","R1A6_SOLDE^R1A6_SOLDE^Q:1033-356,H:615-842^37.5%ID^E:2e-39^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47649_c0_g1_i19.p1","317-1033[-]","R1A6_SOLDE^R1A6_SOLDE^Q:1-226,H:615-842^37.5%ID^E:2e-40^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^2-189^E:5.1e-49",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN43928_c0_g10","leaves S. abrotanoides","leaves S. yangii",1.84764000751141,{"v":5633221230.61311,"d":"5.63E+09"},"0.000198154699637108","TRINITY_DN43928_c0_g10_i1","GATL9_ARATH^GATL9_ARATH^Q:269-1288,H:22-374^69.97%ID^E:5e-169^RecName: Full=Probable galacturonosyltransferase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43928_c0_g10_i1.p1","197-1354[+]","GATL9_ARATH^GATL9_ARATH^Q:5-364,H:2-374^67.29%ID^E:0^RecName: Full=Probable galacturonosyltransferase-like 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01501.17^Glyco_transf_8^Glycosyl transferase family 8^76-336^E:6e-54","sigP:1^30^0.802^YES",".","ENOG410ZJKS^galacturonosyltransferase-like 9-like","KEGG:ath:AT1G70090","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0047262^molecular_function^polygalacturonate 4-alpha-galacturonosyltransferase activity`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0071555^biological_process^cell wall organization`GO:0045489^biological_process^pectin biosynthetic process`GO:0000271^biological_process^polysaccharide biosynthetic process","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN46412_c3_g8","leaves S. abrotanoides","leaves S. yangii",1.83651116148325,"0.000203994213226447","0.000653601711895","TRINITY_DN46412_c3_g8_i1","H4_SOYBN^H4_SOYBN^Q:418-185,H:22-99^100%ID^E:2e-47^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46412_c3_g8_i1.p1","170-481[-]","H4_SOYBN^H4_SOYBN^Q:1-103,H:1-103^100%ID^E:1e-65^RecName: Full=Histone H4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF15511.3^CENP-T_C^Centromere kinetochore component CENP-T histone fold^35-96^E:1.4e-08`PF02969.14^TAF^TATA box binding protein associated factor (TAF)^35-92^E:0.00016",".",".","COG2036^Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling","KEGG:gmx:100305586`KEGG:gmx:100777359`KEGG:gmx:100778317`KEGG:gmx:100784085`KEGG:gmx:100784197`KEGG:gmx:100793106`KEGG:gmx:100799680`KEGG:gmx:100800769`KEGG:gmx:100805597`KEGG:gmx:100818211`KEGG:gmx:100818748`KEGG:gmx:100819286`KO:K11254","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0005730^cellular_component^nucleolus`GO:0000786^cellular_component^nucleosome`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0009579^cellular_component^thylakoid`GO:0005774^cellular_component^vacuolar membrane`GO:0003677^molecular_function^DNA binding`GO:0006334^biological_process^nucleosome assembly","GO:0006352^biological_process^DNA-templated transcription, initiation`GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN46801_c0_g6","leaves S. abrotanoides","leaves S. yangii",1.83619295951067,0,0,"TRINITY_DN46801_c0_g6_i3","BSPA_POPDE^BSPA_POPDE^Q:1142-267,H:29-301^29.05%ID^E:3e-35^RecName: Full=Bark storage protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus",".","TRINITY_DN46801_c0_g6_i3.p1","216-1265[-]","BSPA_POPDE^BSPA_POPDE^Q:42-333,H:29-301^28.28%ID^E:4e-36^RecName: Full=Bark storage protein A;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus","PF01048.17^PNP_UDP_1^Phosphorylase superfamily^42-334^E:6.3e-42","sigP:1^22^0.603^YES",".",".",".","GO:0003824^molecular_function^catalytic activity`GO:0045735^molecular_function^nutrient reservoir activity`GO:0009116^biological_process^nucleoside metabolic process","GO:0003824^molecular_function^catalytic activity`GO:0009116^biological_process^nucleoside metabolic process",".","."]
["TRINITY_DN45530_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.80215270580121,"0.000154805525271627","0.000507030010117991","TRINITY_DN45530_c0_g1_i1","AZF2_ARATH^AZF2_ARATH^Q:212-598,H:61-188^39.53%ID^E:3e-20^RecName: Full=Zinc finger protein AZF2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45530_c0_g1_i1.p1","2-808[+]","ZFP1_WHEAT^ZFP1_WHEAT^Q:77-259,H:55-225^37.76%ID^E:1e-23^RecName: Full=Zinc finger protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum","PF13912.3^zf-C2H2_6^C2H2-type zinc finger^116-140^E:1.4e-11`PF13894.3^zf-C2H2_4^C2H2-type zinc finger^116-138^E:0.00082`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^176-200^E:4.2e-10","sigP:1^37^0.465^YES",".",".",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN45159_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.7970553882782,"0.000163623200655182","0.000533023873588559","TRINITY_DN45159_c0_g2_i1","SMO11_ARATH^SMO11_ARATH^Q:211-759,H:107-293^62.03%ID^E:2e-74^RecName: Full=Methylsterol monooxygenase 1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45159_c0_g2_i1.p1","286-777[+]","SMO11_ARATH^SMO11_ARATH^Q:1-158,H:132-293^65.43%ID^E:7e-80^RecName: Full=Methylsterol monooxygenase 1-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04116.10^FA_hydroxylase^Fatty acid hydroxylase superfamily^1-136^E:2.1e-32",".",".","COG3000^fatty acid hydroxylase","KEGG:ath:AT4G12110`KO:K14423","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0000254^molecular_function^C-4 methylsterol oxidase activity`GO:0005506^molecular_function^iron ion binding`GO:0080064^biological_process^4,4-dimethyl-9beta,19-cyclopropylsterol oxidation`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0016126^biological_process^sterol biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45814_c2_g1","leaves S. abrotanoides","leaves S. yangii",1.78652611169339,"0.000144975641230741","0.000477492000023924","TRINITY_DN45814_c2_g1_i2","PMTK_ARATH^PMTK_ARATH^Q:1550-3,H:8-529^74.19%ID^E:0^RecName: Full=Probable methyltransferase PMT20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45814_c2_g1_i2.p1","3-1574[-]","PMTK_ARATH^PMTK_ARATH^Q:9-524,H:8-529^74.19%ID^E:0^RecName: Full=Probable methyltransferase PMT20;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03141.13^Methyltransf_29^Putative S-adenosyl-L-methionine-dependent methyltransferase^81-522^E:2.7e-189`PF08241.9^Methyltransf_11^Methyltransferase domain^200-293^E:7.9e-07",".",".","ENOG4111CGI^Methyltransferase","KEGG:ath:AT1G31850","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0008168^molecular_function^methyltransferase activity","GO:0008168^molecular_function^methyltransferase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46411_c2_g7","leaves S. abrotanoides","leaves S. yangii",1.78642941107754,{"v":4748686854.44504,"d":"4.75E+09"},"0.00016925504594645","TRINITY_DN46411_c2_g7_i1","SWT16_ORYSJ^SWT16_ORYSJ^Q:231-1019,H:1-257^57.03%ID^E:1e-83^RecName: Full=Bidirectional sugar transporter SWEET16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46411_c2_g7_i1.p1","231-1046[+]","SWT16_ORYSJ^SWT16_ORYSJ^Q:1-263,H:1-257^56.25%ID^E:3e-87^RecName: Full=Bidirectional sugar transporter SWEET16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF03083.13^MtN3_slv^Sugar efflux transporter for intercellular exchange^7-91^E:6.7e-28`PF03083.13^MtN3_slv^Sugar efflux transporter for intercellular exchange^128-211^E:9.2e-26",".",".","ENOG4111M4R^sugar transporter","KEGG:osa:4332795`KO:K15382","GO:0016021^cellular_component^integral component of membrane`GO:0005887^cellular_component^integral component of plasma membrane`GO:0051119^molecular_function^sugar transmembrane transporter activity`GO:0034219^biological_process^carbohydrate transmembrane transport`GO:0008643^biological_process^carbohydrate transport","GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46743_c0_g3","leaves S. abrotanoides","leaves S. yangii",1.77222451171318,"0.0063855607764742","0.0149151684560126","TRINITY_DN46743_c0_g3_i1","PULR_MENPI^PULR_MENPI^Q:653-81,H:4-193^70.68%ID^E:2e-87^RecName: Full=(+)-pulegone reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN46743_c0_g3_i1.p1","207-701[-]","PULR_MENPI^PULR_MENPI^Q:17-164,H:4-150^70.27%ID^E:7e-74^RecName: Full=(+)-pulegone reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF16884.2^ADH_N_2^N-terminal domain of oxidoreductase^18-126^E:8.3e-18",".",".",".","KEGG:ag:AAQ75423`KO:K15092","GO:0005737^cellular_component^cytoplasm`GO:0052579^molecular_function^(+)-pulegone reductase, (+)-isomenthone as substrate, activity`GO:0052580^molecular_function^(+)-pulegone reductase, (-)-menthone as substrate, activity`GO:0070402^molecular_function^NADPH binding`GO:0008270^molecular_function^zinc ion binding`GO:0042214^biological_process^terpene metabolic process`GO:0016114^biological_process^terpenoid biosynthetic process",".",".","."]
["TRINITY_DN47716_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.76428930094293,{"v":4622366402.65867,"d":"4.62E+09"},"0.00016507693300228","TRINITY_DN47716_c1_g3_i3","POLX_TOBAC^POLX_TOBAC^Q:349-810,H:232-394^34.13%ID^E:6e-22^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN47716_c1_g3_i3.p1","457-834[+]","POLX_TOBAC^POLX_TOBAC^Q:15-118,H:291-394^37.5%ID^E:2e-16^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration",".",".","."]
["TRINITY_DN46808_c2_g6","leaves S. abrotanoides","leaves S. yangii",1.74498350229796,{"v":8134429362.24433,"d":"8.13E+09"},"0.00027905950044668","TRINITY_DN46808_c2_g6_i1","LEC2_CLAKE^LEC2_CLAKE^Q:956-234,H:39-289^35.52%ID^E:6e-30^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis",".","TRINITY_DN46808_c2_g6_i1.p1","246-986[-]","LEC2_CLAKE^LEC2_CLAKE^Q:11-245,H:39-283^35.97%ID^E:2e-29^RecName: Full=Agglutinin-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Sophoreae; Cladrastis","PF00139.16^Lectin_legB^Legume lectin domain^12-239^E:2.2e-38",".",".",".",".","GO:0005537^molecular_function^mannose binding`GO:0046872^molecular_function^metal ion binding","GO:0030246^molecular_function^carbohydrate binding",".","."]
["TRINITY_DN50899_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.72383268854232,"0.00406978888652622","0.0100062763341488","TRINITY_DN50899_c0_g1_i1","A10A5_SOYBN^A10A5_SOYBN^Q:171-365,H:25-88^46.97%ID^E:1e-11^RecName: Full=Auxin-induced protein 10A5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN50899_c0_g1_i1.p1","36-401[+]","A10A5_SOYBN^A10A5_SOYBN^Q:46-110,H:25-88^46.97%ID^E:3e-12^RecName: Full=Auxin-induced protein 10A5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF02519.11^Auxin_inducible^Auxin responsive protein^34-109^E:2.2e-20",".",".","ENOG410YUUH^auxin-induced protein",".","GO:0009734^biological_process^auxin-activated signaling pathway","GO:0009733^biological_process^response to auxin",".","."]
["TRINITY_DN47443_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.71379170707055,"0.00127196832967778","0.00349606644918","TRINITY_DN47443_c0_g2_i1","C76BA_SWEMU^C76BA_SWEMU^Q:61-1503,H:3-495^66.26%ID^E:0^RecName: Full=Geraniol 8-hydroxylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Gentianaceae; Gentianeae; Swertia",".","TRINITY_DN47443_c0_g2_i1.p1","1-1506[+]","C76B6_CATRO^C76B6_CATRO^Q:21-501,H:1-493^64.65%ID^E:0^RecName: Full=Geraniol 8-hydroxylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF00067.19^p450^Cytochrome P450^49-489^E:7e-101",".",".",".","KEGG:ag:CAC80883`KO:K15099","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0016099^biological_process^monoterpenoid biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN14250_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.71355514046911,"0.00497969644127978","0.0119637989972885","TRINITY_DN14250_c0_g1_i1","CML45_ARATH^CML45_ARATH^Q:391-134,H:115-200^48.84%ID^E:1e-19^RecName: Full=Probable calcium-binding protein CML45;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN14250_c0_g1_i1.p1","119-760[-]","CML45_ARATH^CML45_ARATH^Q:124-209,H:115-200^48.84%ID^E:7e-20^RecName: Full=Probable calcium-binding protein CML45;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13499.3^EF-hand_7^EF-hand domain pair^143-209^E:1.7e-13`PF13405.3^EF-hand_6^EF-hand domain^145-174^E:2.1e-05`PF13202.3^EF-hand_5^EF hand^146-170^E:0.00042`PF13833.3^EF-hand_8^EF-hand domain pair^157-211^E:5.4e-13`PF00036.29^EF-hand_1^EF hand^183-210^E:1.6e-09`PF13405.3^EF-hand_6^EF-hand domain^185-209^E:3.6e-05`PF13202.3^EF-hand_5^EF hand^187-208^E:8e-06",".",".","COG5126^Calcium-binding protein","KEGG:ath:AT5G39670","GO:0005509^molecular_function^calcium ion binding","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN44579_c6_g2","leaves S. abrotanoides","leaves S. yangii",1.69969024742775,"0.00193527126230886","0.00511949902387476","TRINITY_DN44579_c6_g2_i6","PHT17_ARATH^PHT17_ARATH^Q:1-1164,H:135-518^77.06%ID^E:0^RecName: Full=Probable inorganic phosphate transporter 1-7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44579_c6_g2_i6.p1","1-1218[+]","PHT13_ARATH^PHT13_ARATH^Q:1-387,H:135-520^77.78%ID^E:0^RecName: Full=Probable inorganic phosphate transporter 1-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00083.21^Sugar_tr^Sugar (and other) transporter^3-381^E:1.1e-33`PF07690.13^MFS_1^Major Facilitator Superfamily^3-323^E:1.8e-08",".",".","ENOG410ZVN7^phosphate transporter","KEGG:ath:AT5G43360`KO:K08176","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005886^cellular_component^plasma membrane`GO:0005315^molecular_function^inorganic phosphate transmembrane transporter activity`GO:0022891^molecular_function^substrate-specific transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0006817^biological_process^phosphate ion transport","GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46340_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.69968117065527,"0.000181685898309954","0.000587405450950266","TRINITY_DN46340_c0_g1_i6","R1B16_SOLDE^R1B16_SOLDE^Q:64-318,H:1159-1243^42.35%ID^E:8e-14^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46340_c0_g1_i6.p1","1-330[+]","R1B16_SOLDE^R1B16_SOLDE^Q:13-106,H:1151-1243^41.49%ID^E:9e-16^RecName: Full=Putative late blight resistance protein homolog R1B-16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN40647_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.69367313384727,"0.000341257739773464","0.0010501798098755","TRINITY_DN40647_c0_g1_i1","DIR5_ARATH^DIR5_ARATH^Q:111-566,H:31-182^63.82%ID^E:3e-66^RecName: Full=Dirigent protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40647_c0_g1_i1.p1","3-575[+]","DIR5_ARATH^DIR5_ARATH^Q:27-188,H:21-182^60.49%ID^E:1e-67^RecName: Full=Dirigent protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^41-183^E:3.8e-37","sigP:1^31^0.809^YES",".","ENOG410YHQS^disease resistance response protein 206-like","KEGG:ath:AT1G64160","GO:0048046^cellular_component^apoplast`GO:0042349^molecular_function^guiding stereospecific synthesis activity`GO:1901599^biological_process^(-)-pinoresinol biosynthetic process`GO:0050790^biological_process^regulation of catalytic activity",".",".","."]
["TRINITY_DN46942_c0_g8","leaves S. abrotanoides","leaves S. yangii",1.6907196703847,"0.000359063985800499","0.00110069818764185","TRINITY_DN46942_c0_g8_i1","R1B8_SOLDE^R1B8_SOLDE^Q:1-498,H:980-1141^30%ID^E:2e-08^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46942_c0_g8_i1.p1","1-504[+]","R1B8_SOLDE^R1B8_SOLDE^Q:1-166,H:980-1141^30%ID^E:2e-08^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN37969_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.6667064616319,"0.000546651215186128","0.00161722602710092","TRINITY_DN37969_c0_g1_i1","FBK50_ARATH^FBK50_ARATH^Q:303-1331,H:36-420^30.5%ID^E:5e-37^RecName: Full=F-box/kelch-repeat protein At3g06240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37969_c0_g1_i1.p1","288-1358[+]","FBK50_ARATH^FBK50_ARATH^Q:6-348,H:36-420^30.5%ID^E:2e-38^RecName: Full=F-box/kelch-repeat protein At3g06240;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^4-42^E:3.6e-08`PF12937.4^F-box-like^F-box-like^5-41^E:1e-06`PF07734.10^FBA_1^F-box associated^198-289^E:3.3e-07`PF08268.9^FBA_3^F-box associated domain^198-284^E:0.00016",".",".","ENOG410ZSG0^FBOX","KEGG:ath:AT3G06240",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44241_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.6516895292243,"0.00412050989625445","0.0101149923879419","TRINITY_DN44241_c1_g1_i4","DBNBT_TAXCA^DBNBT_TAXCA^Q:1374-241,H:8-423^31.35%ID^E:6e-55^RecName: Full=3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Cupressales; Taxaceae; Taxus",".","TRINITY_DN44241_c1_g1_i4.p1","211-1377[-]","DBNBT_TAXCA^DBNBT_TAXCA^Q:2-347,H:8-386^33.07%ID^E:8e-60^RecName: Full=3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Cupressales; Taxaceae; Taxus","PF02458.12^Transferase^Transferase family^10-110^E:1.3e-17`PF02458.12^Transferase^Transferase family^117-349^E:2.1e-37",".",".",".",".","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0042617^biological_process^paclitaxel biosynthetic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN45316_c2_g6","leaves S. abrotanoides","leaves S. yangii",1.64983163588991,"0.000485410878405796","0.00145043728096717","TRINITY_DN45316_c2_g6_i1","Y4372_ARATH^Y4372_ARATH^Q:176-2362,H:19-752^53.71%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g37250;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45316_c2_g6_i1.p1","107-2374[+]","Y4372_ARATH^Y4372_ARATH^Q:24-752,H:19-752^54.51%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g37250;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^28-67^E:4.9e-13`PF00069.22^Pkinase^Protein kinase domain^456-747^E:8.4e-29`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^471-609^E:2.4e-18","sigP:1^22^0.891^YES",".","ENOG410YAQD^LRR receptor-like serine threonine-protein kinase","KEGG:ath:AT4G37250","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46819_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.649338947804,"0.000793243937468699","0.00227354133137337","TRINITY_DN46819_c1_g3_i1","C86A1_ARATH^C86A1_ARATH^Q:1089-319,H:252-508^77.82%ID^E:1e-142^RecName: Full=Cytochrome P450 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46819_c1_g3_i1.p1","271-1071[-]","C86A1_ARATH^C86A1_ARATH^Q:1-251,H:258-508^78.09%ID^E:2e-143^RecName: Full=Cytochrome P450 86A1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^12-237^E:2.9e-46",".",".","COG2124^Cytochrome p450","KEGG:ath:AT5G58860`KO:K15401","GO:0016021^cellular_component^integral component of membrane`GO:0005773^cellular_component^vacuole`GO:0018685^molecular_function^alkane 1-monooxygenase activity`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0006631^biological_process^fatty acid metabolic process`GO:0010345^biological_process^suberin biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN40337_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.64757080950379,"0.0118469041572851","0.0257825578331559","TRINITY_DN40337_c0_g2_i1","GLRX_SOLLC^GLRX_SOLLC^Q:329-45,H:7-102^53.12%ID^E:4e-27^RecName: Full=Glutaredoxin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN40337_c0_g2_i1.p1","42-443[-]","GLRX_SOLLC^GLRX_SOLLC^Q:36-133,H:4-102^54.55%ID^E:2e-29^RecName: Full=Glutaredoxin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00462.21^Glutaredoxin^Glutaredoxin^47-109^E:8.9e-18`PF05768.11^DUF836^Glutaredoxin-like domain (DUF836)^48-127^E:0.00023",".",".","COG0695^Glutaredoxin","KEGG:sly:544298","GO:0005737^cellular_component^cytoplasm`GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN44526_c0_g3","leaves S. abrotanoides","leaves S. yangii",1.64562274976288,"0.000558615294587946","0.00164903598486415","TRINITY_DN44526_c0_g3_i2","ALMT2_ARATH^ALMT2_ARATH^Q:363-1505,H:9-396^52.06%ID^E:1e-108^RecName: Full=Aluminum-activated malate transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44526_c0_g3_i2.p1","261-1613[+]","ALMT2_ARATH^ALMT2_ARATH^Q:30-415,H:4-396^51.4%ID^E:1e-149^RecName: Full=Aluminum-activated malate transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11744.5^ALMT^Aluminium activated malate transporter^39-373^E:8.1e-135`PF13515.3^FUSC_2^Fusaric acid resistance protein-like^69-202^E:1.2e-12`PF04632.9^FUSC^Fusaric acid resistance protein family^78-230^E:1.6e-11",".",".","ENOG410XR8V^aluminum-activated malate transporter","KEGG:ath:AT1G08440","GO:0016021^cellular_component^integral component of membrane`GO:0015743^biological_process^malate transport","GO:0015743^biological_process^malate transport`GO:0006810^biological_process^transport`GO:0005886^cellular_component^plasma membrane",".","."]
["TRINITY_DN44423_c2_g1","leaves S. abrotanoides","leaves S. yangii",1.63540399082991,"0.000766231084446546","0.00220249711323288","TRINITY_DN44423_c2_g1_i1","GATA9_ARATH^GATA9_ARATH^Q:1130-285,H:18-308^44.34%ID^E:4e-63^RecName: Full=GATA transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44423_c2_g1_i1.p1","282-1214[-]","GATA9_ARATH^GATA9_ARATH^Q:25-310,H:14-308^45.37%ID^E:1e-71^RecName: Full=GATA transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00320.24^GATA^GATA zinc finger^211-245^E:1.1e-14",".",".","COG5641^Transcription factor","KEGG:ath:AT4G32890","GO:0005634^cellular_component^nucleus`GO:0005667^cellular_component^transcription factor complex`GO:0003682^molecular_function^chromatin binding`GO:0000977^molecular_function^RNA polymerase II regulatory region sequence-specific DNA binding`GO:0001085^molecular_function^RNA polymerase II transcription factor binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0001228^molecular_function^transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding`GO:0008270^molecular_function^zinc ion binding`GO:0030154^biological_process^cell differentiation`GO:0007623^biological_process^circadian rhythm`GO:0045944^biological_process^positive regulation of transcription from RNA polymerase II promoter`GO:0009416^biological_process^response to light stimulus`GO:0006366^biological_process^transcription from RNA polymerase II promoter","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN44902_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.6295967032125,{"v":8604329217.36298,"d":"8.60E+09"},"0.000294345112928298","TRINITY_DN44902_c0_g2_i1","BG4_ARATH^BG4_ARATH^Q:1-159,H:202-255^46.3%ID^E:4e-06^RecName: Full=Probable glucan endo-1,3-beta-glucosidase BG4 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44902_c0_g2_i1.p1","1-381[+]","BG3_ARATH^BG3_ARATH^Q:1-127,H:199-294^30.47%ID^E:2e-07^RecName: Full=Probable glucan endo-1,3-beta-glucosidase BG3 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^2-53^E:3.2e-09",".",".","ENOG410YAHP^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT3G57240","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0005783^cellular_component^endoplasmic reticulum`GO:0008810^molecular_function^cellulase activity`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0009617^biological_process^response to bacterium","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN43532_c3_g6","leaves S. abrotanoides","leaves S. yangii",1.62898564835474,"0.00173842555064029","0.00464049012377611","TRINITY_DN43532_c3_g6_i4","ASOL_BRANA^ASOL_BRANA^Q:1814-279,H:24-543^56.24%ID^E:0^RecName: Full=L-ascorbate oxidase homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica",".","TRINITY_DN43532_c3_g6_i4.p1","255-1874[-]","ASOL_BRANA^ASOL_BRANA^Q:21-532,H:24-543^56.24%ID^E:0^RecName: Full=L-ascorbate oxidase homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica","PF07732.12^Cu-oxidase_3^Multicopper oxidase^31-144^E:3.1e-36`PF00394.19^Cu-oxidase^Multicopper oxidase^157-293^E:8e-41`PF07731.11^Cu-oxidase_2^Multicopper oxidase^375-511^E:5.8e-27","sigP:1^20^0.886^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0005507^molecular_function^copper ion binding`GO:0016491^molecular_function^oxidoreductase activity","GO:0005507^molecular_function^copper ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45857_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.61794168246172,"0.0003475519840903","0.00106781387069031","TRINITY_DN45857_c0_g1_i1","CCB23_ARATH^CCB23_ARATH^Q:331-1554,H:6-428^60.47%ID^E:6e-175^RecName: Full=Cyclin-B2-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45857_c0_g1_i1.p1","316-1572[+]","CCB23_ARATH^CCB23_ARATH^Q:6-413,H:6-428^60.47%ID^E:7e-178^RecName: Full=Cyclin-B2-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^165-290^E:3.8e-46`PF02984.16^Cyclin_C^Cyclin, C-terminal domain^293-409^E:1.9e-35",".",".","COG5024^g2 mitotic-specific","KEGG:ath:AT1G20610`KO:K05868","GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division","GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN43706_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.61462134638721,"0.00749061137854395","0.0171811410677779","TRINITY_DN43706_c1_g3_i2","CNBL3_ORYSJ^CNBL3_ORYSJ^Q:2-466,H:63-217^86.45%ID^E:1e-92^RecName: Full=Calcineurin B-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43706_c1_g3_i2.p1","2-439[+]","CNBL3_ORYSJ^CNBL3_ORYSJ^Q:1-145,H:63-207^91.72%ID^E:6e-93^RecName: Full=Calcineurin B-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF13833.3^EF-hand_8^EF-hand domain pair^1-47^E:0.00012`PF13202.3^EF-hand_5^EF hand^25-46^E:0.0015`PF13833.3^EF-hand_8^EF-hand domain pair^74-129^E:0.026`PF00036.29^EF-hand_1^EF hand^105-131^E:6.5e-07`PF13202.3^EF-hand_5^EF hand^105-129^E:5.2e-08",".",".","COG5126^Calcium-binding protein","KEGG:osa:4333502`KO:K06268","GO:0005509^molecular_function^calcium ion binding","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN47306_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.6093810674229,"0.000236787834421407","0.00074873922548529","TRINITY_DN47306_c0_g1_i1","VESTR_MEDSA^VESTR_MEDSA^Q:1190-216,H:3-326^49.85%ID^E:3e-112^RecName: Full=Vestitone reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago",".","TRINITY_DN47306_c0_g1_i1.p1","210-1310[-]","VESTR_MEDSA^VESTR_MEDSA^Q:41-365,H:3-326^49.85%ID^E:1e-113^RecName: Full=Vestitone reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^46-287^E:3.5e-18`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^48-212^E:1.4e-12`PF07993.9^NAD_binding_4^Male sterility protein^48-234^E:6.1e-10`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^48-304^E:6e-08`PF13460.3^NAD_binding_10^NAD(P)H-binding^50-234^E:5.1e-12",".",".",".","KEGG:ag:AAB41550`KO:K13265","GO:0050662^molecular_function^coenzyme binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0006952^biological_process^defense response`GO:0009813^biological_process^flavonoid biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN38338_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.60547002410684,"0.000542006348337695","0.0016050110470155","TRINITY_DN38338_c0_g1_i1","NAC40_ARATH^NAC40_ARATH^Q:1750-992,H:6-237^50.38%ID^E:3e-74^RecName: Full=NAC domain-containing protein 40 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38338_c0_g1_i1.p1","677-1831[-]","NAC40_ARATH^NAC40_ARATH^Q:28-280,H:6-237^50.59%ID^E:1e-77^RecName: Full=NAC domain-containing protein 40 {ECO:0000303|PubMed:15029955};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^39-162^E:1.3e-26",".",".","ENOG4111423^NAC domain-containing protein","KEGG:ath:AT2G27300","GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071472^biological_process^cellular response to salt stress`GO:0009908^biological_process^flower development`GO:0009740^biological_process^gibberellic acid mediated signaling pathway`GO:0033619^biological_process^membrane protein proteolysis`GO:0009938^biological_process^negative regulation of gibberellic acid mediated signaling pathway`GO:0048573^biological_process^photoperiodism, flowering`GO:0009739^biological_process^response to gibberellin`GO:0009651^biological_process^response to salt stress`GO:0009845^biological_process^seed germination`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43559_c4_g9","leaves S. abrotanoides","leaves S. yangii",1.59665803517203,"0.00496278640865835","0.0119284370528896","TRINITY_DN43559_c4_g9_i2","KCS10_ARATH^KCS10_ARATH^Q:1180-137,H:4-347^78.45%ID^E:0^RecName: Full=3-ketoacyl-CoA synthase 10 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43559_c4_g9_i2.p1","107-1183[-]","KCS10_ARATH^KCS10_ARATH^Q:2-349,H:4-347^78.45%ID^E:0^RecName: Full=3-ketoacyl-CoA synthase 10 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08392.9^FAE1_CUT1_RppA^FAE1/Type III polyketide synthase-like protein^115-349^E:5.4e-108",".",".","ENOG410YCWN^3-ketoacyl-coa synthase","KEGG:ath:AT2G26250`KO:K15397","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0009409^biological_process^response to cold`GO:0080167^biological_process^response to karrikin`GO:0009416^biological_process^response to light stimulus","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN40369_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.59243005595653,"0.00452486974795862","0.0109788849890853","TRINITY_DN40369_c0_g2_i1","E1313_ARATH^E1313_ARATH^Q:186-1505,H:24-456^43.44%ID^E:2e-123^RecName: Full=Glucan endo-1,3-beta-glucosidase 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40369_c0_g2_i1.p1","3-1511[+]","E1313_ARATH^E1313_ARATH^Q:62-501,H:24-456^43.44%ID^E:3e-126^RecName: Full=Glucan endo-1,3-beta-glucosidase 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^64-381^E:6.1e-99`PF07983.10^X8^X8 domain^413-484^E:1.4e-23",".",".","ENOG410YA1S^glucan endo-1-3-beta-glucosidase","KEGG:ath:AT5G56590","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0005576^cellular_component^extracellular region`GO:0009505^cellular_component^plant-type cell wall`GO:0005886^cellular_component^plasma membrane`GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0071555^biological_process^cell wall organization`GO:0006952^biological_process^defense response","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN46250_c2_g3","leaves S. abrotanoides","leaves S. yangii",1.58811539063534,{"v":3034483670.43071,"d":"3.03E+09"},"0.000111930962967912","TRINITY_DN46250_c2_g3_i1","DRL4_ARATH^DRL4_ARATH^Q:525-13,H:34-208^32.77%ID^E:5e-21^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46250_c2_g3_i1.p1","1-702[-]","DRL4_ARATH^DRL4_ARATH^Q:60-230,H:34-208^32.77%ID^E:4e-21^RecName: Full=Putative disease resistance protein At1g50180;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^200-232^E:3.4e-06",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G50180","GO:0009506^cellular_component^plasmodesma`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46698_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.58425752154076,"0.00610457400385481","0.0143357414106918","TRINITY_DN46698_c1_g1_i9","NAC8_ARATH^NAC8_ARATH^Q:158-799,H:4-211^56.48%ID^E:9e-76^RecName: Full=NAC domain-containing protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46698_c1_g1_i9.p1","152-1048[+]","NAC8_ARATH^NAC8_ARATH^Q:3-253,H:4-252^52.51%ID^E:2e-80^RecName: Full=NAC domain-containing protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^56-197^E:1.8e-12",".",".","ENOG410YADT^Nac domain-containing protein","KEGG:ath:AT1G25580","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0000077^biological_process^DNA damage checkpoint`GO:0040020^biological_process^regulation of meiotic nuclear division`GO:0010332^biological_process^response to gamma radiation`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43817_c6_g6","leaves S. abrotanoides","leaves S. yangii",1.58363797027113,"0.00619076782415736","0.0145162371961234","TRINITY_DN43817_c6_g6_i1","ZHD4_ARATH^ZHD4_ARATH^Q:350-535,H:86-147^74.19%ID^E:2e-26^RecName: Full=Zinc-finger homeodomain protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43817_c6_g6_i1.p1","209-571[+]","ZHD4_ARATH^ZHD4_ARATH^Q:48-108,H:86-146^75.41%ID^E:1e-28^RecName: Full=Zinc-finger homeodomain protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04770.9^ZF-HD_dimer^ZF-HD protein dimerisation region^50-102^E:3.6e-30",".",".","ENOG410YG6U^ZF-HD protein dimerisation region containing protein, expressed","KEGG:ath:AT1G14440","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0046872^molecular_function^metal ion binding`GO:0042803^molecular_function^protein homodimerization activity`GO:0048574^biological_process^long-day photoperiodism, flowering`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46312_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.58221330983388,"0.00175427759598787","0.00467764393522409","TRINITY_DN46312_c1_g3_i1","KCS11_ARATH^KCS11_ARATH^Q:1078-365,H:272-509^82.77%ID^E:7e-147^RecName: Full=3-ketoacyl-CoA synthase 11 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46312_c1_g3_i1.p1","359-1078[-]","KCS11_ARATH^KCS11_ARATH^Q:1-238,H:272-509^82.77%ID^E:3e-149^RecName: Full=3-ketoacyl-CoA synthase 11 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08392.9^FAE1_CUT1_RppA^FAE1/Type III polyketide synthase-like protein^1-110^E:7.6e-52`PF08541.7^ACP_syn_III_C^3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal^127-207^E:3.3e-11`PF02797.12^Chal_sti_synt_C^Chalcone and stilbene synthases, C-terminal domain^129-208^E:1.8e-09",".",".","ENOG410Y5VH^3-ketoacyl-coa synthase","KEGG:ath:AT2G26640`KO:K15397","GO:0016021^cellular_component^integral component of membrane`GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0009409^biological_process^response to cold`GO:0009416^biological_process^response to light stimulus","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN32325_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.5756111972732,"0.00297540580557954","0.00757028347869699","TRINITY_DN32325_c0_g1_i3","FBL47_ARATH^FBL47_ARATH^Q:132-1070,H:13-293^27.9%ID^E:1e-19^RecName: Full=F-box/LRR-repeat protein At3g26922;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN32325_c0_g1_i3.p1","111-1331[+]","FBL47_ARATH^FBL47_ARATH^Q:8-320,H:13-293^27.9%ID^E:4e-20^RecName: Full=F-box/LRR-repeat protein At3g26922;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^10-49^E:4.9e-07",".",".","ENOG4111DD1^FBOX","KEGG:ath:AT3G26922",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN39670_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.5728576715171,"0.002690588021987","0.00690452134245669","TRINITY_DN39670_c0_g1_i1","CHIT2_TULBA^CHIT2_TULBA^Q:126-944,H:2-274^67.27%ID^E:2e-123^RecName: Full=Chitinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Liliales; Liliaceae; Tulipa",".","TRINITY_DN39670_c0_g1_i1.p1","30-956[+]","CHIT2_TULBA^CHIT2_TULBA^Q:33-305,H:2-274^67.27%ID^E:1e-129^RecName: Full=Chitinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Liliales; Liliaceae; Tulipa","PF00704.25^Glyco_hydro_18^Glycosyl hydrolases family 18^61-224^E:1.6e-16","sigP:1^23^0.847^YES",".",".",".","GO:0008061^molecular_function^chitin binding`GO:0004568^molecular_function^chitinase activity`GO:0006032^biological_process^chitin catabolic process`GO:0000272^biological_process^polysaccharide catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN44733_c4_g1","leaves S. abrotanoides","leaves S. yangii",1.57006185803257,"0.00241169665199856","0.00624923038207981","TRINITY_DN44733_c4_g1_i6","ORG2_ARATH^ORG2_ARATH^Q:283-813,H:71-244^43.89%ID^E:8e-38^RecName: Full=Transcription factor ORG2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44733_c4_g1_i6.p1","205-819[+]","ORG2_ARATH^ORG2_ARATH^Q:27-203,H:71-244^43.89%ID^E:7e-40^RecName: Full=Transcription factor ORG2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^28-79^E:2e-10",".",".","ENOG410YP85^Transcription factor","KEGG:ath:AT3G56970","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0010106^biological_process^cellular response to iron ion starvation`GO:0055072^biological_process^iron ion homeostasis`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN24042_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.5663448778889,"0.000624451433435215","0.0018236058894338","TRINITY_DN24042_c0_g1_i1","PUP9_ARATH^PUP9_ARATH^Q:1206-136,H:24-387^41.64%ID^E:2e-46^RecName: Full=Probable purine permease 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN24042_c0_g1_i1.p1","151-894[-]","PUP9_ARATH^PUP9_ARATH^Q:2-244,H:133-377^46.53%ID^E:4e-75^RecName: Full=Probable purine permease 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16913.2^PUNUT^Purine nucleobase transmembrane transport^1-227^E:5.7e-70",".",".","ENOG4111D9S^purine permease","KEGG:ath:AT4G18220","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity",".",".","."]
["TRINITY_DN46590_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.56074687839607,"0.000174842588577928","0.000566268410485764","TRINITY_DN46590_c1_g1_i1","FOX3_ARATH^FOX3_ARATH^Q:279-1769,H:29-521^48.8%ID^E:4e-157^RecName: Full=Flavin-dependent oxidoreductase FOX3 {ECO:0000303|PubMed:26352477};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46590_c1_g1_i1.p1","189-1820[+]","FOX3_ARATH^FOX3_ARATH^Q:8-527,H:4-521^47.42%ID^E:6e-159^RecName: Full=Flavin-dependent oxidoreductase FOX3 {ECO:0000303|PubMed:26352477};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01565.20^FAD_binding_4^FAD binding domain^78-217^E:6.3e-28`PF08031.9^BBE^Berberine and berberine like^472-528^E:4.9e-23","sigP:1^24^0.779^YES",".","COG0277^FAD linked oxidase domain protein","KEGG:ath:AT1G26400","GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47191_c3_g2","leaves S. abrotanoides","leaves S. yangii",1.56062096228914,{"v":6718758468.82282,"d":"6.72E+09"},"0.000233324157735483","TRINITY_DN47191_c3_g2_i10","CSLA1_CYATE^CSLA1_CYATE^Q:72-1205,H:1-352^67.72%ID^E:0^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis`CSLA1_CYATE^CSLA1_CYATE^Q:1279-1659,H:348-474^75.59%ID^E:0^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis`CSLA1_CYATE^CSLA1_CYATE^Q:1754-1918,H:472-526^67.27%ID^E:0^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis",".","TRINITY_DN47191_c3_g2_i10.p1","72-1004[+]","CSLA1_CYATE^CSLA1_CYATE^Q:1-306,H:1-305^72.88%ID^E:3e-163^RecName: Full=Mannan synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Indigofereae; Cyamopsis","PF13641.3^Glyco_tranf_2_3^Glycosyltransferase like family 2^92-303^E:1.3e-18`PF00535.23^Glycos_transf_2^Glycosyl transferase family 2^97-244^E:4.7e-12`PF13632.3^Glyco_trans_2_3^Glycosyl transferase family group 2^186-301^E:3.7e-10",".",".",".",".","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0071555^biological_process^cell wall organization",".",".","."]
["TRINITY_DN22193_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.55922816369426,"0.00104306952919306","0.00291550653769573","TRINITY_DN22193_c0_g1_i1","GDL79_ARATH^GDL79_ARATH^Q:190-1209,H:28-366^75%ID^E:0^RecName: Full=GDSL esterase/lipase At5g33370;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22193_c0_g1_i1.p1","124-1212[+]","GDL79_ARATH^GDL79_ARATH^Q:6-362,H:8-366^72.78%ID^E:0^RecName: Full=GDSL esterase/lipase At5g33370;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^27-339^E:2.1e-14","sigP:1^23^0.867^YES",".","COG3240^GDSL esterase lipase","KEGG:ath:AT5G33370","GO:0005576^cellular_component^extracellular region`GO:0016788^molecular_function^hydrolase activity, acting on ester bonds`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN46193_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.55759464847208,"0.00459272495727877","0.0111261674699364","TRINITY_DN46193_c0_g1_i2","FACR1_ARATH^FACR1_ARATH^Q:1527-49,H:2-489^52.52%ID^E:5e-176^RecName: Full=Fatty acyl-CoA reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46193_c0_g1_i2.p1","43-1533[-]","FACR1_ARATH^FACR1_ARATH^Q:3-495,H:2-489^52.52%ID^E:1e-176^RecName: Full=Fatty acyl-CoA reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07993.9^NAD_binding_4^Male sterility protein^17-320^E:1.8e-75`PF03015.16^Sterile^Male sterility protein^397-495^E:2.3e-17",".",".","ENOG410XS7R^fatty-acyl-CoA reductase (alcohol-forming) activity","KEGG:ath:AT5G22500`KO:K13356","GO:0009507^cellular_component^chloroplast`GO:0005886^cellular_component^plasma membrane`GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity`GO:0050062^molecular_function^long-chain-fatty-acyl-CoA reductase activity`GO:0006629^biological_process^lipid metabolic process`GO:0009651^biological_process^response to salt stress`GO:0009611^biological_process^response to wounding`GO:0010345^biological_process^suberin biosynthetic process","GO:0080019^molecular_function^fatty-acyl-CoA reductase (alcohol-forming) activity",".","."]
["TRINITY_DN44166_c4_g4","leaves S. abrotanoides","leaves S. yangii",1.55031318427756,"0.00650361275358069","0.0151567659313353","TRINITY_DN44166_c4_g4_i2","CSLA2_ARATH^CSLA2_ARATH^Q:1305-142,H:144-529^61.6%ID^E:6e-173^RecName: Full=Glucomannan 4-beta-mannosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44166_c4_g4_i2.p1","124-1302[-]","CSLA2_ARATH^CSLA2_ARATH^Q:1-387,H:145-529^61.76%ID^E:3e-176^RecName: Full=Glucomannan 4-beta-mannosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00535.23^Glycos_transf_2^Glycosyl transferase family 2^8-120^E:5e-10`PF13641.3^Glyco_tranf_2_3^Glycosyltransferase like family 2^14-188^E:4.6e-23`PF13506.3^Glyco_transf_21^Glycosyl transferase family 21^18-185^E:6.5e-10`PF13632.3^Glyco_trans_2_3^Glycosyl transferase family group 2^47-244^E:1.8e-25",".",".","COG1215^Glycosyl transferase, family 2","KEGG:ath:AT5G22740`KO:K13680","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0047259^molecular_function^glucomannan 4-beta-mannosyltransferase activity`GO:0051753^molecular_function^mannan synthase activity`GO:0071555^biological_process^cell wall organization`GO:0097502^biological_process^mannosylation`GO:0010192^biological_process^mucilage biosynthetic process`GO:0048359^biological_process^mucilage metabolic process involved in seed coat development","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups",".","."]
["TRINITY_DN47239_c1_g4","leaves S. abrotanoides","leaves S. yangii",1.5333513574423,"0.00129911497937577","0.00356393216088296","TRINITY_DN47239_c1_g4_i1","ALKR5_ARATH^ALKR5_ARATH^Q:92-679,H:72-242^60.71%ID^E:4e-102^RecName: Full=Probable aldo-keto reductase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALKR5_ARATH^ALKR5_ARATH^Q:756-1079,H:235-344^57.27%ID^E:4e-102^RecName: Full=Probable aldo-keto reductase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALKR5_ARATH^ALKR5_ARATH^Q:6-92,H:45-73^75.86%ID^E:4e-102^RecName: Full=Probable aldo-keto reductase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47239_c1_g4_i1.p1","2-478[+]","ALKR4_ARATH^ALKR4_ARATH^Q:31-158,H:72-199^77.34%ID^E:7e-64^RecName: Full=Probable aldo-keto reductase 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00248.18^Aldo_ket_red^Aldo/keto reductase family^31-158^E:1.2e-30",".",".","COG0667^Aldo keto reductase","KEGG:ath:AT1G60710","GO:0005829^cellular_component^cytosol`GO:0016491^molecular_function^oxidoreductase activity`GO:0046686^biological_process^response to cadmium ion",".",".","."]
["TRINITY_DN44063_c2_g3","leaves S. abrotanoides","leaves S. yangii",1.52749020296315,"0.00154409575563574","0.00416464028034345","TRINITY_DN44063_c2_g3_i3","TAR2_ARATH^TAR2_ARATH^Q:1184-126,H:78-434^56.27%ID^E:7e-140^RecName: Full=Tryptophan aminotransferase-related protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44063_c2_g3_i3.p1","102-1307[-]","TAR2_ARATH^TAR2_ARATH^Q:42-394,H:78-434^56.27%ID^E:2e-141^RecName: Full=Tryptophan aminotransferase-related protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04864.10^Alliinase_C^Allinase^44-395^E:3.4e-135`PF00155.18^Aminotran_1_2^Aminotransferase class I and II^89-382^E:5.7e-10",".",".","ENOG410YMNS^tryptophan aminotransferase-related protein 2-like","KEGG:ath:AT4G24670`KO:K16903","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016846^molecular_function^carbon-sulfur lyase activity`GO:0050362^molecular_function^L-tryptophan:2-oxoglutarate aminotransferase activity`GO:0080097^molecular_function^L-tryptophan:pyruvate aminotransferase activity`GO:0009851^biological_process^auxin biosynthetic process`GO:0043562^biological_process^cellular response to nitrogen levels`GO:0042742^biological_process^defense response to bacterium`GO:0009908^biological_process^flower development`GO:0048467^biological_process^gynoecium development`GO:0048527^biological_process^lateral root development`GO:0010078^biological_process^maintenance of root meristem identity`GO:0010087^biological_process^phloem or xylem histogenesis`GO:0009958^biological_process^positive gravitropism`GO:0009723^biological_process^response to ethylene`GO:0048367^biological_process^shoot system development","GO:0016846^molecular_function^carbon-sulfur lyase activity`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0009058^biological_process^biosynthetic process",".","."]
["TRINITY_DN45975_c0_g4","leaves S. abrotanoides","leaves S. yangii",1.51876096802148,"0.0119142559129995","0.0259135958695086","TRINITY_DN45975_c0_g4_i1","ENOX_SOLLC^ENOX_SOLLC^Q:12-989,H:69-378^63.19%ID^E:2e-102^RecName: Full=2-methylene-furan-3-one reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45975_c0_g4_i1.p1","3-1022[+]","QORL_ARATH^QORL_ARATH^Q:14-339,H:77-386^64.72%ID^E:1e-140^RecName: Full=Quinone oxidoreductase-like protein At1g23740, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08240.9^ADH_N^Alcohol dehydrogenase GroES-like domain^43-109^E:1.5e-08`PF07709.8^SRR^Seven Residue Repeat^148-157^E:35`PF00107.23^ADH_zinc_N^Zinc-binding dehydrogenase^175-262^E:9.9e-16`PF13602.3^ADH_zinc_N_2^Zinc-binding dehydrogenase^208-335^E:3e-17`PF07709.8^SRR^Seven Residue Repeat^314-325^E:120",".",".","COG0604^alcohol dehydrogenase","KEGG:ath:AT1G23740`KO:K18980","GO:0048046^cellular_component^apoplast`GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0009570^cellular_component^chloroplast stroma`GO:0010319^cellular_component^stromule`GO:0009579^cellular_component^thylakoid`GO:0035798^molecular_function^2-alkenal reductase (NADP+) activity`GO:0035671^molecular_function^enone reductase activity`GO:0008270^molecular_function^zinc ion binding`GO:0055114^biological_process^oxidation-reduction process`GO:0009409^biological_process^response to cold","GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN17808_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.51671354062228,"0.000654025386549865","0.00190257164552261","TRINITY_DN17808_c0_g1_i1","NLTPB_RICCO^NLTPB_RICCO^Q:75-344,H:1-90^50%ID^E:6e-22^RecName: Full=Non-specific lipid-transfer protein B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus",".","TRINITY_DN17808_c0_g1_i1.p1","3-401[+]","NLTPB_RICCO^NLTPB_RICCO^Q:25-114,H:1-90^50%ID^E:4e-22^RecName: Full=Non-specific lipid-transfer protein B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus","PF14368.3^LTP_2^Probable lipid transfer^10-101^E:2.9e-05`PF00234.19^Tryp_alpha_amyl^Protease inhibitor/seed storage/LTP family^27-104^E:2.5e-09","sigP:1^24^0.674^YES",".",".",".","GO:0008289^molecular_function^lipid binding`GO:0006869^biological_process^lipid transport",".",".","."]
["TRINITY_DN45447_c6_g1","leaves S. abrotanoides","leaves S. yangii",1.50830149764581,"0.000661227930063849","0.00192147029884028","TRINITY_DN45447_c6_g1_i1","TCP5_ARATH^TCP5_ARATH^Q:1086-874,H:45-115^84.51%ID^E:8e-35^RecName: Full=Transcription factor TCP5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45447_c6_g1_i1.p1","295-1146[-]","TCP5_ARATH^TCP5_ARATH^Q:21-280,H:45-359^37.93%ID^E:3e-47^RecName: Full=Transcription factor TCP5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03634.10^TCP^TCP family transcription factor^39-143^E:1.2e-25",".",".","ENOG410YQU0^Transcription factor","KEGG:ath:AT5G60970","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0030154^biological_process^cell differentiation`GO:0048366^biological_process^leaf development`GO:0009965^biological_process^leaf morphogenesis`GO:0045962^biological_process^positive regulation of development, heterochronic`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46088_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.49842820119191,{"v":9041192409.21683,"d":"9.04E+09"},"0.000308369241100074","TRINITY_DN46088_c3_g1_i1","MYB4_ORYSJ^MYB4_ORYSJ^Q:133-399,H:1-89^78.65%ID^E:5e-42^RecName: Full=Myb-related protein Myb4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MYB4_ORYSJ^MYB4_ORYSJ^Q:710-796,H:88-116^89.66%ID^E:6e-10^RecName: Full=Myb-related protein Myb4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN46088_c3_g1_i1.p1","605-1192[+]","MYB6_ARATH^MYB6_ARATH^Q:18-138,H:70-190^31.25%ID^E:3e-11^RecName: Full=Transcription repressor MYB6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT4G09460`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009739^biological_process^response to gibberellin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47156_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.4973292009473,"0.000692064482765605","0.00200359155002504","TRINITY_DN47156_c3_g1_i5","IQM1_ARATH^IQM1_ARATH^Q:1274-360,H:198-483^58.36%ID^E:1e-121^RecName: Full=IQ domain-containing protein IQM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`IQM1_ARATH^IQM1_ARATH^Q:1665-1357,H:96-198^69.9%ID^E:1e-121^RecName: Full=IQ domain-containing protein IQM1 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47156_c3_g1_i5.p2","1327-1854[-]","IQM4_ARATH^IQM4_ARATH^Q:64-166,H:126-228^70.87%ID^E:2e-43^RecName: Full=IQ domain-containing protein IQM4 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00612.24^IQ^IQ calmodulin-binding motif^76-93^E:0.013",".",".","ENOG410XYNX^Calmodulin-binding","KEGG:ath:AT2G26190","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47715_c3_g2","leaves S. abrotanoides","leaves S. yangii",1.4956147576524,"0.0064430146919193","0.0150316299048378","TRINITY_DN47715_c3_g2_i8","FHY3_ARATH^FHY3_ARATH^Q:737-1177,H:235-380^22.3%ID^E:5e-06^RecName: Full=Protein FAR-RED ELONGATED HYPOCOTYL 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47715_c3_g2_i8.p1","152-1414[+]","FHY3_ARATH^FHY3_ARATH^Q:196-342,H:235-380^22.3%ID^E:2e-06^RecName: Full=Protein FAR-RED ELONGATED HYPOCOTYL 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03108.12^DBD_Tnp_Mut^MuDR family transposase^51-109^E:2.3e-10`PF00872.15^Transposase_mut^Transposase, Mutator family^245-388^E:7.9e-11`PF10551.6^MULE^MULE transposase domain^246-339^E:1.9e-19",".",".","ENOG410ZJSX^protein FAR1-RELATED SEQUENCE 5-like","KEGG:ath:AT3G22170","GO:0005634^cellular_component^nucleus`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0007623^biological_process^circadian rhythm`GO:0042753^biological_process^positive regulation of circadian rhythm`GO:0045893^biological_process^positive regulation of transcription, DNA-templated`GO:0010017^biological_process^red or far-red light signaling pathway`GO:0009585^biological_process^red, far-red light phototransduction`GO:0010218^biological_process^response to far red light`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0004803^molecular_function^transposase activity`GO:0006313^biological_process^transposition, DNA-mediated",".","."]
["TRINITY_DN40034_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.49439424611414,"0.0076391379734577","0.0174831396083738","TRINITY_DN40034_c0_g1_i3","HMG13_ARATH^HMG13_ARATH^Q:532-137,H:98-233^65.44%ID^E:3e-46^RecName: Full=High mobility group B protein 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40034_c0_g1_i3.p1","119-976[-]","HMGB6_ARATH^HMGB6_ARATH^Q:44-279,H:6-241^58.92%ID^E:7e-78^RecName: Full=High mobility group B protein 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00505.16^HMG_box^HMG (high mobility group) box^177-238^E:1.8e-14`PF09011.7^HMG_box_2^HMG-box domain^177-236^E:7.5e-09",".",".","COG5648^high mobility group",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN45011_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.49020315054416,"0.00102319602138792","0.00286658133938504","TRINITY_DN45011_c1_g1_i2","TOP2_PEA^TOP2_PEA^Q:2293-611,H:719-1279^53.46%ID^E:3e-145^RecName: Full=DNA topoisomerase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum`TOP2_PEA^TOP2_PEA^Q:454-332,H:1344-1387^70.45%ID^E:2e-08^RecName: Full=DNA topoisomerase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum",".","TRINITY_DN45011_c1_g1_i2.p1","107-2314[-]","TOP2_PEA^TOP2_PEA^Q:8-706,H:719-1439^51.42%ID^E:0^RecName: Full=DNA topoisomerase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Fabeae; Pisum","PF00521.17^DNA_topoisoIV^DNA gyrase/topoisomerase IV, subunit A^8-417^E:7.3e-97","sigP:1^17^0.535^YES",".",".",".","GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0003918^molecular_function^DNA topoisomerase type II (ATP-hydrolyzing) activity`GO:0046872^molecular_function^metal ion binding`GO:0006265^biological_process^DNA topological change","GO:0003677^molecular_function^DNA binding`GO:0003918^molecular_function^DNA topoisomerase type II (ATP-hydrolyzing) activity`GO:0005524^molecular_function^ATP binding`GO:0006265^biological_process^DNA topological change",".","."]
["TRINITY_DN39707_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.47773273725905,"0.000995057366211105","0.00279602259541626","TRINITY_DN39707_c0_g1_i1","WRK75_ARATH^WRK75_ARATH^Q:690-418,H:55-145^84.62%ID^E:2e-52^RecName: Full=Probable WRKY transcription factor 75;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39707_c0_g1_i1.p1","415-999[-]","WRK75_ARATH^WRK75_ARATH^Q:103-194,H:54-145^84.78%ID^E:2e-55^RecName: Full=Probable WRKY transcription factor 75;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^116-173^E:4.7e-26",".",".","ENOG410YM5M^WRKY","KEGG:ath:AT5G13080","GO:0005634^cellular_component^nucleus`GO:0001046^molecular_function^core promoter sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0010055^biological_process^atrichoblast differentiation`GO:0048527^biological_process^lateral root development`GO:0000122^biological_process^negative regulation of transcription from RNA polymerase II promoter`GO:0043620^biological_process^regulation of DNA-templated transcription in response to stress`GO:0032107^biological_process^regulation of response to nutrient levels`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN46093_c4_g1","leaves S. abrotanoides","leaves S. yangii",1.47648932289049,"0.00741142251263052","0.0170210224438368","TRINITY_DN46093_c4_g1_i3","E13B_PRUPE^E13B_PRUPE^Q:1017-811,H:282-349^56.52%ID^E:4e-17^RecName: Full=Glucan endo-1,3-beta-glucosidase, basic isoform;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus",".","TRINITY_DN46093_c4_g1_i3.p1","805-1149[-]","E13B_PRUPE^E13B_PRUPE^Q:32-113,H:262-349^48.31%ID^E:4e-20^RecName: Full=Glucan endo-1,3-beta-glucosidase, basic isoform;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus","PF00332.15^Glyco_hydro_17^Glycosyl hydrolases family 17^47-113^E:1e-20",".",".",".",".","GO:0042973^molecular_function^glucan endo-1,3-beta-D-glucosidase activity`GO:0005975^biological_process^carbohydrate metabolic process`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN47331_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.47186543971276,"0.00548248317012519","0.013015218986732","TRINITY_DN47331_c1_g3_i1","EDR2L_ARATH^EDR2L_ARATH^Q:460-1722,H:289-719^72.85%ID^E:0^RecName: Full=Protein ENHANCED DISEASE RESISTANCE 2-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47331_c1_g3_i1.p1","661-1728[+]","EDR2L_ARATH^EDR2L_ARATH^Q:1-354,H:356-719^71.15%ID^E:3e-172^RecName: Full=Protein ENHANCED DISEASE RESISTANCE 2-like;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07059.9^DUF1336^Protein of unknown function (DUF1336)^138-341^E:4.1e-70",".",".","ENOG4112846^Domain containing protein, expressed","KEGG:ath:AT5G45560","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0008289^molecular_function^lipid binding`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN47067_c2_g1","leaves S. abrotanoides","leaves S. yangii",1.46415126783524,"0.000223309356257086","0.000710764204522991","TRINITY_DN47067_c2_g1_i17","Y5262_ARATH^Y5262_ARATH^Q:228-1331,H:51-378^23.38%ID^E:9e-08^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47067_c2_g1_i17.p1","3-1727[+]","Y5262_ARATH^Y5262_ARATH^Q:76-560,H:51-497^23.05%ID^E:6e-11^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5262_ARATH^Y5262_ARATH^Q:49-175,H:128-252^30.47%ID^E:6e-06^RecName: Full=Ankyrin repeat-containing protein At5g02620;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^85-171^E:1.9e-11`PF13962.3^PGG^Domain of unknown function^409-520^E:2.2e-19",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT5G02620","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN47749_c4_g7","leaves S. abrotanoides","leaves S. yangii",1.46101858529649,"0.00013864805025762","0.00045803711823842","TRINITY_DN47749_c4_g7_i3","RGA4_SOLBU^RGA4_SOLBU^Q:618-1,H:342-545^50.47%ID^E:2e-58^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47749_c4_g7_i3.p1","1-639[-]","RGA4_SOLBU^RGA4_SOLBU^Q:8-213,H:342-545^50.47%ID^E:2e-58^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^8-102^E:1.6e-20",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN36678_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.45564155858326,"0.00529930612042849","0.0126354677470663","TRINITY_DN36678_c0_g1_i1","CSPL1_IPONI^CSPL1_IPONI^Q:449-826,H:69-195^69.29%ID^E:3e-29^RecName: Full=CASP-like protein IN26;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN36678_c0_g1_i1.p1","179-829[+]","CSPL7_SOYBN^CSPL7_SOYBN^Q:45-216,H:11-193^55.43%ID^E:2e-60^RecName: Full=CASP-like protein 1D2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF04535.9^DUF588^Domain of unknown function (DUF588)^57-198^E:2.7e-34",".",".","ENOG410YKHF^CASP-like protein","KEGG:gmx:100499706","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN47241_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.45471047936194,"0.0171536079556524","0.0356736064590617","TRINITY_DN47241_c1_g3_i1","Y3471_ARATH^Y3471_ARATH^Q:28-381,H:371-483^39.5%ID^E:5e-14^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3471_ARATH^Y3471_ARATH^Q:49-345,H:498-589^36.36%ID^E:3e-09^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3471_ARATH^Y3471_ARATH^Q:1-336,H:187-292^31.25%ID^E:4e-06^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47241_c1_g3_i1.p1","1-384[+]","Y3471_ARATH^Y3471_ARATH^Q:10-127,H:371-483^39.5%ID^E:5e-14^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3471_ARATH^Y3471_ARATH^Q:17-115,H:498-589^36.36%ID^E:2e-09^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3471_ARATH^Y3471_ARATH^Q:1-112,H:187-292^31.25%ID^E:3e-06^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^15-30^E:1.1`PF13855.3^LRR_8^Leucine rich repeat^17-76^E:1.9e-06`PF00560.30^LRR_1^Leucine Rich Repeat^18-38^E:1.7`PF00560.30^LRR_1^Leucine Rich Repeat^43-63^E:0.57`PF00560.30^LRR_1^Leucine Rich Repeat^95-108^E:1.9",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47110","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN42322_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.45212204652463,"0.00160447918244299","0.00431467577108974","TRINITY_DN42322_c0_g2_i6","POT2_ARATH^POT2_ARATH^Q:98-2323,H:1-735^77.23%ID^E:0^RecName: Full=Potassium transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42322_c0_g2_i6.p1","98-2281[+]","POT2_ARATH^POT2_ARATH^Q:1-718,H:1-710^79.09%ID^E:0^RecName: Full=Potassium transporter 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02705.13^K_trans^K+ potassium transporter^25-600^E:2.1e-194",".",".","COG3158^Transport of potassium into the cell (By similarity)","KEGG:ath:AT2G40540`KO:K03549","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015079^molecular_function^potassium ion transmembrane transporter activity","GO:0015079^molecular_function^potassium ion transmembrane transporter activity`GO:0071805^biological_process^potassium ion transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN73520_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.43847980721913,"0.000905876169557113","0.00256496069127914","TRINITY_DN73520_c0_g1_i1","DIR23_ARATH^DIR23_ARATH^Q:116-571,H:36-187^32.89%ID^E:9e-25^RecName: Full=Dirigent protein 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN73520_c0_g1_i1.p1","50-577[+]","DIR23_ARATH^DIR23_ARATH^Q:23-174,H:36-187^32.89%ID^E:7e-26^RecName: Full=Dirigent protein 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03018.11^Dirigent^Dirigent-like protein^30-172^E:3.4e-36","sigP:1^22^0.887^YES",".","ENOG410YZUA^Disease resistance response protein","KEGG:ath:AT2G21100","GO:0048046^cellular_component^apoplast",".",".","."]
["TRINITY_DN45824_c0_g7","leaves S. abrotanoides","leaves S. yangii",1.43489245299285,"0.00390737640736222","0.00965711848966004","TRINITY_DN45824_c0_g7_i3","COMT1_CAPAN^COMT1_CAPAN^Q:354-755,H:1-136^57.66%ID^E:1e-36^RecName: Full=Caffeic acid 3-O-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum",".","TRINITY_DN45824_c0_g7_i3.p1","354-758[+]","COMT1_CAPAN^COMT1_CAPAN^Q:1-134,H:1-136^57.66%ID^E:4e-44^RecName: Full=Caffeic acid 3-O-methyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum","PF08100.8^Dimerisation^Dimerisation domain^31-82^E:3.1e-16",".",".",".",".","GO:0047763^molecular_function^caffeate O-methyltransferase activity`GO:0009809^biological_process^lignin biosynthetic process","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN46883_c0_g4","leaves S. abrotanoides","leaves S. yangii",1.42842255261983,"0.000183550161783067","0.000593058498688901","TRINITY_DN46883_c0_g4_i2","AGL30_ARATH^AGL30_ARATH^Q:283-576,H:1-98^64.29%ID^E:7e-38^RecName: Full=Agamous-like MADS-box protein AGL30 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46883_c0_g4_i2.p2","283-579[+]","AGL65_ARATH^AGL65_ARATH^Q:1-99,H:1-99^66.67%ID^E:1e-39^RecName: Full=Agamous-like MADS-box protein AGL65 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00319.15^SRF-TF^SRF-type transcription factor (DNA-binding and dimerisation domain)^15-55^E:6.7e-18",".",".","COG5068^Transcription factor",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN40316_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.42085031267451,"0.000476232124425617","0.00142555379120751","TRINITY_DN40316_c1_g1_i1","ASPG2_ARATH^ASPG2_ARATH^Q:1859-2215,H:351-470^35.94%ID^E:1e-18^RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ASPG2_ARATH^ASPG2_ARATH^Q:1308-1784,H:194-352^31.25%ID^E:1e-18^RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ASPG2_ARATH^ASPG2_ARATH^Q:668-850,H:131-194^34.38%ID^E:4e-06^RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40316_c1_g1_i1.p1","380-883[+]","ASPG1_ARATH^ASPG1_ARATH^Q:84-155,H:150-223^42.67%ID^E:3e-11^RecName: Full=Protein ASPARTIC PROTEASE IN GUARD CELL 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^97-155^E:3.1e-15`PF00026.20^Asp^Eukaryotic aspartyl protease^97-145^E:4.4e-07","sigP:1^21^0.778^YES",".","ENOG410XNV7^aspartic","KEGG:ath:AT3G18490","GO:0005783^cellular_component^endoplasmic reticulum`GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0070001^molecular_function^aspartic-type peptidase activity`GO:0003677^molecular_function^DNA binding`GO:0030163^biological_process^protein catabolic process`GO:0009737^biological_process^response to abscisic acid`GO:0009414^biological_process^response to water deprivation`GO:0009627^biological_process^systemic acquired resistance",".",".","."]
["TRINITY_DN41800_c0_g5","leaves S. abrotanoides","leaves S. yangii",1.41676653909227,"0.000164417382766144","0.000535290683664776","TRINITY_DN41800_c0_g5_i1","GSO2_ARATH^GSO2_ARATH^Q:395-2398,H:234-867^30.56%ID^E:1e-57^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:893-2299,H:76-569^28.22%ID^E:5e-27^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:881-1510,H:169-427^30.77%ID^E:2e-21^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:335-1516,H:457-837^31.59%ID^E:4e-21^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1169-2299,H:72-401^30.03%ID^E:2e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1730-2308,H:89-283^32.83%ID^E:9e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1688-2302,H:170-378^31.6%ID^E:6e-11^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO2_ARATH^GSO2_ARATH^Q:1754-2302,H:146-329^33.16%ID^E:2e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41800_c0_g5_i1.p1","125-2470[+]","GSO1_ARATH^GSO1_ARATH^Q:31-752,H:28-860^29.68%ID^E:1e-71^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^28-68^E:5e-09`PF13855.3^LRR_8^Leucine rich repeat^228-287^E:1.5e-07`PF13516.3^LRR_6^Leucine Rich repeat^347-362^E:1.6`PF13855.3^LRR_8^Leucine rich repeat^372-431^E:1.9e-09`PF00560.30^LRR_1^Leucine Rich Repeat^372-392^E:0.064`PF00560.30^LRR_1^Leucine Rich Repeat^397-416^E:0.47`PF13855.3^LRR_8^Leucine rich repeat^446-505^E:1.2e-06`PF13855.3^LRR_8^Leucine rich repeat^662-721^E:7.8e-08`PF13516.3^LRR_6^Leucine Rich repeat^684-700^E:0.25","sigP:1^26^0.724^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT4G20140","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0090558^biological_process^plant epidermis development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46788_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.41185510321848,"0.000347201744353795","0.00106703892470847","TRINITY_DN46788_c0_g1_i1","SCP48_ARATH^SCP48_ARATH^Q:158-1639,H:7-508^66.8%ID^E:0^RecName: Full=Serine carboxypeptidase-like 48;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46788_c0_g1_i1.p1","65-1648[+]","SCP48_ARATH^SCP48_ARATH^Q:32-525,H:7-508^66.8%ID^E:0^RecName: Full=Serine carboxypeptidase-like 48;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^117-515^E:2.8e-128","sigP:1^44^0.586^YES",".","COG2939^carboxy-peptidase","KEGG:ath:AT3G45010`KO:K16298","GO:0005576^cellular_component^extracellular region`GO:0005773^cellular_component^vacuole`GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN28179_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.40614639170547,"0.00614512666716164","0.0144231958662043","TRINITY_DN28179_c0_g1_i1","CBL10_ARATH^CBL10_ARATH^Q:261-1121,H:54-340^60.42%ID^E:2e-119^RecName: Full=COBRA-like protein 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28179_c0_g1_i1.p1","159-1121[+]","CBL10_ARATH^CBL10_ARATH^Q:35-321,H:54-340^60.42%ID^E:2e-120^RecName: Full=COBRA-like protein 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04833.12^COBRA^COBRA-like protein^226-321^E:8.9e-28","sigP:1^23^0.731^YES",".","ENOG410ZHV6^cobra-like protein","KEGG:ath:AT3G20580","GO:0031225^cellular_component^anchored component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0016049^biological_process^cell growth`GO:0010215^biological_process^cellulose microfibril organization","GO:0010215^biological_process^cellulose microfibril organization`GO:0016049^biological_process^cell growth`GO:0031225^cellular_component^anchored component of membrane",".","."]
["TRINITY_DN47723_c1_g5","leaves S. abrotanoides","leaves S. yangii",1.40608673989321,{"v":4983666065.94061,"d":"4.98E+09"},"0.00017696403281114","TRINITY_DN47723_c1_g5_i1","R1B23_SOLDE^R1B23_SOLDE^Q:500-159,H:744-858^27.83%ID^E:1e-10^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47723_c1_g5_i1.p1","3-500[-]","R1B23_SOLDE^R1B23_SOLDE^Q:1-114,H:744-858^27.83%ID^E:9e-11^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN47277_c4_g2","leaves S. abrotanoides","leaves S. yangii",1.40437443652957,"0.0108449628056132","0.0238475277852374","TRINITY_DN47277_c4_g2_i3","SRG1_ARATH^SRG1_ARATH^Q:986-165,H:83-358^59.42%ID^E:1e-120^RecName: Full=Protein SRG1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47277_c4_g2_i3.p1","219-938[-]","SRG1_ARATH^SRG1_ARATH^Q:1-238,H:99-338^60.83%ID^E:3e-106^RecName: Full=Protein SRG1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^2-63^E:2.7e-07`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^111-209^E:2e-26",".",".","COG3491^2OGFe(II) oxygenase","KEGG:ath:AT1G17020","GO:0046872^molecular_function^metal ion binding`GO:0016682^molecular_function^oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor`GO:0010260^biological_process^organ senescence","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43767_c7_g1","leaves S. abrotanoides","leaves S. yangii",1.39923131995993,"0.00666531703505602","0.0154954743883525","TRINITY_DN43767_c7_g1_i1","HSL1_ARATH^HSL1_ARATH^Q:3287-366,H:17-996^68.39%ID^E:0^RecName: Full=Receptor-like protein kinase HSL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43767_c7_g1_i1.p1","363-3368[-]","HSL1_ARATH^HSL1_ARATH^Q:24-1001,H:13-996^68.32%ID^E:0^RecName: Full=Receptor-like protein kinase HSL1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^28-67^E:5.4e-10`PF13855.3^LRR_8^Leucine rich repeat^113-156^E:1.5e-06`PF13516.3^LRR_6^Leucine Rich repeat^144-159^E:0.66`PF00560.30^LRR_1^Leucine Rich Repeat^145-163^E:0.58`PF13855.3^LRR_8^Leucine rich repeat^506-565^E:1.6e-07`PF00069.22^Pkinase^Protein kinase domain^691-906^E:1.8e-42`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^692-916^E:4.3e-38","sigP:1^24^0.865^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G28440`KO:K00924","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46281_c4_g2","leaves S. abrotanoides","leaves S. yangii",1.39596514652461,"0.000472675239448633","0.00141646444587869","TRINITY_DN46281_c4_g2_i1","PPR38_ARATH^PPR38_ARATH^Q:1915-197,H:2-595^35.07%ID^E:9e-121^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:1240-170,H:70-394^26.94%ID^E:2e-33^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46281_c4_g2_i1.p1","128-1936[-]","PPR38_ARATH^PPR38_ARATH^Q:8-580,H:2-595^35.07%ID^E:2e-121^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR38_ARATH^PPR38_ARATH^Q:233-589,H:70-394^26.94%ID^E:1e-33^RecName: Full=Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12854.4^PPR_1^PPR repeat^140-167^E:1.8e-07`PF01535.17^PPR^PPR repeat^146-170^E:0.11`PF13041.3^PPR_2^PPR repeat family^179-228^E:3.3e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^207-258^E:6.6e-06`PF12854.4^PPR_1^PPR repeat^211-242^E:3.4e-09`PF13041.3^PPR_2^PPR repeat family^214-262^E:1.2e-15`PF01535.17^PPR^PPR repeat^218-247^E:3.7e-06`PF12854.4^PPR_1^PPR repeat^245-276^E:2e-08`PF01535.17^PPR^PPR repeat^252-276^E:0.0056`PF13812.3^PPR_3^Pentatricopeptide repeat domain^273-330^E:8.5e-08`PF13041.3^PPR_2^PPR repeat family^286-332^E:8.5e-16`PF12854.4^PPR_1^PPR repeat^286-312^E:7.5e-08`PF01535.17^PPR^PPR repeat^287-316^E:5.3e-06`PF12854.4^PPR_1^PPR repeat^316-345^E:1.3e-08`PF01535.17^PPR^PPR repeat^323-351^E:2.2e-05`PF13041.3^PPR_2^PPR repeat family^327-368^E:8.2e-12`PF13812.3^PPR_3^Pentatricopeptide repeat domain^343-398^E:1.6e-07`PF12854.4^PPR_1^PPR repeat^351-381^E:2e-11`PF01535.17^PPR^PPR repeat^357-387^E:1.7e-07`PF13041.3^PPR_2^PPR repeat family^358-401^E:3.7e-14`PF13812.3^PPR_3^Pentatricopeptide repeat domain^378-431^E:0.00034`PF12854.4^PPR_1^PPR repeat^385-418^E:6.3e-06`PF01535.17^PPR^PPR repeat^393-418^E:0.0037`PF13041.3^PPR_2^PPR repeat family^421-469^E:2.3e-12`PF01535.17^PPR^PPR repeat^424-454^E:0.054`PF13812.3^PPR_3^Pentatricopeptide repeat domain^446-500^E:0.00023`PF12854.4^PPR_1^PPR repeat^453-483^E:1.5e-08`PF13041.3^PPR_2^PPR repeat family^457-505^E:7.4e-09`PF01535.17^PPR^PPR repeat^459-489^E:0.00015`PF13812.3^PPR_3^Pentatricopeptide repeat domain^480-536^E:9.4e-07`PF12854.4^PPR_1^PPR repeat^487-520^E:5.8e-06`PF13041.3^PPR_2^PPR repeat family^495-538^E:1.2e-11`PF01535.17^PPR^PPR repeat^495-524^E:8.5e-07",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G12700","GO:0005739^cellular_component^mitochondrion",".",".","."]
["TRINITY_DN43800_c4_g7","leaves S. abrotanoides","leaves S. yangii",1.39027356886672,"0.000279046292102505","0.000870979639369258","TRINITY_DN43800_c4_g7_i1","PPR75_ARATH^PPR75_ARATH^Q:130-1422,H:17-459^45.27%ID^E:1e-117^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR75_ARATH^PPR75_ARATH^Q:52-1206,H:82-490^28.67%ID^E:2e-33^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43800_c4_g7_i1.p1","28-1422[+]","PPR75_ARATH^PPR75_ARATH^Q:35-465,H:17-459^45.27%ID^E:3e-126^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PPR75_ARATH^PPR75_ARATH^Q:9-393,H:82-490^28.67%ID^E:2e-39^RecName: Full=Pentatricopeptide repeat-containing protein At1g50270;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^82-125^E:9.5e-05`PF01535.17^PPR^PPR repeat^151-177^E:0.0036`PF13812.3^PPR_3^Pentatricopeptide repeat domain^176-209^E:0.0052`PF13041.3^PPR_2^PPR repeat family^177-214^E:6.1e-09`PF01535.17^PPR^PPR repeat^179-209^E:2.8e-08`PF01535.17^PPR^PPR repeat^251-276^E:0.1`PF01535.17^PPR^PPR repeat^281-307^E:0.00062`PF01535.17^PPR^PPR repeat^351-376^E:0.00013`PF13041.3^PPR_2^PPR repeat family^376-424^E:1.1e-08`PF13812.3^PPR_3^Pentatricopeptide repeat domain^377-423^E:6.8e-06`PF01535.17^PPR^PPR repeat^381-409^E:0.00011`PF01535.17^PPR^PPR repeat^414-441^E:0.1",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT1G50270",".",".",".","."]
["TRINITY_DN43372_c7_g1","leaves S. abrotanoides","leaves S. yangii",1.38699013869927,"0.00374957647304216","0.00929666113915053","TRINITY_DN43372_c7_g1_i2","TLPH_ORYSJ^TLPH_ORYSJ^Q:985-323,H:30-250^63.96%ID^E:3e-88^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43372_c7_g1_i2.p1","317-1054[-]","TLPH_ORYSJ^TLPH_ORYSJ^Q:24-245,H:30-251^63.68%ID^E:1e-91^RecName: Full=Thaumatin-like protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00314.14^Thaumatin^Thaumatin family^29-243^E:1.5e-74","sigP:1^19^0.805^YES",".","ENOG410YBU8^Thaumatin family","KEGG:osa:4351223",".",".",".","."]
["TRINITY_DN35997_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.38624722303807,"0.0144703436049049","0.030736246381153","TRINITY_DN35997_c0_g1_i1","PUB25_ARATH^PUB25_ARATH^Q:428-1447,H:12-369^29.56%ID^E:3e-28^RecName: Full=U-box domain-containing protein 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN35997_c0_g1_i1.p1","413-1540[+]","PUB25_ARATH^PUB25_ARATH^Q:6-360,H:12-384^30.34%ID^E:9e-37^RecName: Full=U-box domain-containing protein 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^8-78^E:1.6e-19`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^14-50^E:0.00013",".",".","ENOG410YB5U^Ubox domain-containing protein","KEGG:ath:AT3G19380","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010200^biological_process^response to chitin","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN88305_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.3814261038863,"0.000124418760452402","0.000414741899891396","TRINITY_DN88305_c0_g1_i1","CPR30_ARATH^CPR30_ARATH^Q:390-1139,H:91-351^25.46%ID^E:1e-12^RecName: Full=F-box protein CPR30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN88305_c0_g1_i1.p1","42-1217[+]","CPR30_ARATH^CPR30_ARATH^Q:117-366,H:91-351^25.46%ID^E:8e-13^RecName: Full=F-box protein CPR30;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08268.9^FBA_3^F-box associated domain^234-308^E:7.5e-05`PF07734.10^FBA_1^F-box associated^235-273^E:9.1e-06",".",".","ENOG4111BET^NA","KEGG:ath:AT4G12560","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0031348^biological_process^negative regulation of defense response`GO:0042177^biological_process^negative regulation of protein catabolic process`GO:0009626^biological_process^plant-type hypersensitive response`GO:0016567^biological_process^protein ubiquitination",".",".","."]
["TRINITY_DN44038_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.37541380511525,"0.000788151548187912","0.00226043358933662","TRINITY_DN44038_c1_g1_i4","COBL4_ARATH^COBL4_ARATH^Q:257-1114,H:17-288^67.93%ID^E:7e-132^RecName: Full=COBRA-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`COBL4_ARATH^COBL4_ARATH^Q:871-993,H:198-238^92.68%ID^E:2e-17^RecName: Full=COBRA-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44038_c1_g1_i4.p1","212-808[+]","COBL4_ARATH^COBL4_ARATH^Q:16-196,H:17-197^86.74%ID^E:7e-114^RecName: Full=COBRA-like protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04833.12^COBRA^COBRA-like protein^43-197^E:1.5e-65","sigP:1^19^0.91^YES",".","ENOG410YAAC^cobra-like protein","KEGG:ath:AT5G15630","GO:0031225^cellular_component^anchored component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0016049^biological_process^cell growth`GO:0010215^biological_process^cellulose microfibril organization`GO:0009834^biological_process^plant-type secondary cell wall biogenesis","GO:0010215^biological_process^cellulose microfibril organization`GO:0016049^biological_process^cell growth`GO:0031225^cellular_component^anchored component of membrane",".","."]
["TRINITY_DN43109_c3_g4","leaves S. abrotanoides","leaves S. yangii",1.37133332929848,"0.00623008344638332","0.0145974213883085","TRINITY_DN43109_c3_g4_i1","RL261_ARATH^RL261_ARATH^Q:93-446,H:17-135^68.07%ID^E:4e-48^RecName: Full=60S ribosomal protein L26-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43109_c3_g4_i1.p1","3-452[+]","RL261_ARATH^RL261_ARATH^Q:16-148,H:2-135^67.16%ID^E:4e-55^RecName: Full=60S ribosomal protein L26-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16906.2^Ribosomal_L26^Ribosomal proteins L26 eukaryotic, L24P archaeal^22-134^E:2.2e-38`PF00467.26^KOW^KOW motif^65-96^E:4.2e-07",".",".","COG0198^One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (By similarity)","KEGG:ath:AT3G49910`KO:K02898","GO:0009507^cellular_component^chloroplast`GO:0005829^cellular_component^cytosol`GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0022626^cellular_component^cytosolic ribosome`GO:0016020^cellular_component^membrane`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0009409^biological_process^response to cold`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0015934^cellular_component^large ribosomal subunit",".","."]
["TRINITY_DN46249_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.36972016279718,{"v":8514791703.44621,"d":"8.51E+09"},"0.000291511123507606","TRINITY_DN46249_c3_g1_i3","RNHX1_ARATH^RNHX1_ARATH^Q:326-1375,H:257-606^24.32%ID^E:3e-17^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46249_c3_g1_i3.p1","2-1396[+]","RNHX1_ARATH^RNHX1_ARATH^Q:109-458,H:257-606^24.32%ID^E:2e-17^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13966.3^zf-RVT^zinc-binding in reverse transcriptase^117-206^E:3.8e-20`PF13456.3^RVT_3^Reverse transcriptase-like^317-437^E:3.2e-24",".",".",".",".","GO:0046872^molecular_function^metal ion binding`GO:0003676^molecular_function^nucleic acid binding`GO:0004523^molecular_function^RNA-DNA hybrid ribonuclease activity",".",".","."]
["TRINITY_DN44432_c2_g2","leaves S. abrotanoides","leaves S. yangii",1.36850142667488,"0.00139353443761812","0.00379237830829858","TRINITY_DN44432_c2_g2_i2","NAT7_ARATH^NAT7_ARATH^Q:2292-1120,H:20-410^63.17%ID^E:5e-124^RecName: Full=Nucleobase-ascorbate transporter 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NAT7_ARATH^NAT7_ARATH^Q:741-370,H:414-537^61.29%ID^E:1e-42^RecName: Full=Nucleobase-ascorbate transporter 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44432_c2_g2_i2.p1","1060-2322[-]","NAT4_ARATH^NAT4_ARATH^Q:5-401,H:2-398^64.48%ID^E:2e-179^RecName: Full=Nucleobase-ascorbate transporter 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00860.17^Xan_ur_permease^Permease family^35-408^E:2.1e-57",".",".","COG2233^permease","KEGG:ath:AT1G49960","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0055085^biological_process^transmembrane transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47226_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.36729254709151,"0.00721248122037796","0.0166244534809091","TRINITY_DN47226_c0_g1_i1","AUR1_ARATH^AUR1_ARATH^Q:487-200,H:198-293^88.54%ID^E:1e-56^RecName: Full=Serine/threonine-protein kinase Aurora-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47226_c0_g1_i1.p1","194-499[-]","AUR1_ARATH^AUR1_ARATH^Q:5-100,H:198-293^88.54%ID^E:1e-58^RecName: Full=Serine/threonine-protein kinase Aurora-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^6-89^E:3.7e-17`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^8-85^E:3.3e-06",".",".","ENOG410XNRB^serine threonine-protein kinase","KEGG:ath:AT4G32830`KO:K08850","GO:0009504^cellular_component^cell plate`GO:0032133^cellular_component^chromosome passenger complex`GO:0000780^cellular_component^condensed nuclear chromosome, centromeric region`GO:0005874^cellular_component^microtubule`GO:0031965^cellular_component^nuclear membrane`GO:0005730^cellular_component^nucleolus`GO:0005634^cellular_component^nucleus`GO:0009524^cellular_component^phragmoplast`GO:0005819^cellular_component^spindle`GO:0005876^cellular_component^spindle microtubule`GO:0051233^cellular_component^spindle midzone`GO:0000922^cellular_component^spindle pole`GO:0005524^molecular_function^ATP binding`GO:0035175^molecular_function^histone kinase activity (H3-S10 specific)`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0051301^biological_process^cell division`GO:0043987^biological_process^histone H3-S10 phosphorylation`GO:0016572^biological_process^histone phosphorylation`GO:0007067^biological_process^mitotic nuclear division`GO:0007052^biological_process^mitotic spindle organization`GO:0032465^biological_process^regulation of cytokinesis","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN35590_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.36481108342509,"0.000276644837687199","0.000864351369751911","TRINITY_DN35590_c0_g1_i1","RL6_MESCR^RL6_MESCR^Q:781-128,H:11-234^53.33%ID^E:2e-59^RecName: Full=60S ribosomal protein L6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum",".","TRINITY_DN35590_c0_g1_i1.p1","125-790[-]","RL6_MESCR^RL6_MESCR^Q:4-221,H:11-234^53.33%ID^E:4e-69^RecName: Full=60S ribosomal protein L6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Aizoaceae; Mesembryanthemum","PF03868.12^Ribosomal_L6e_N^Ribosomal protein L6, N-terminal domain^5-34^E:5.6e-06`PF01159.16^Ribosomal_L6e^Ribosomal protein L6e^113-221^E:7.3e-39",".",".",".",".","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46953_c4_g1","leaves S. abrotanoides","leaves S. yangii",1.36298313959054,"0.00277670989985432","0.00710292309203807","TRINITY_DN46953_c4_g1_i2","AIR3_ARATH^AIR3_ARATH^Q:134-2353,H:31-771^66.17%ID^E:0^RecName: Full=Subtilisin-like protease SBT5.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46953_c4_g1_i2.p1","44-2362[+]","AIR3_ARATH^AIR3_ARATH^Q:31-770,H:31-771^66.17%ID^E:0^RecName: Full=Subtilisin-like protease SBT5.3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05922.13^Inhibitor_I9^Peptidase inhibitor I9^31-116^E:1.4e-14`PF00082.19^Peptidase_S8^Subtilase family^145-619^E:5.2e-45`PF02225.19^PA^PA domain^404-477^E:6.2e-12","sigP:1^27^0.832^YES",".","COG1404^peptidase (S8 and S53, subtilisin, kexin, sedolisin","KEGG:ath:AT2G04160","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0010102^biological_process^lateral root morphogenesis`GO:0009733^biological_process^response to auxin","GO:0004252^molecular_function^serine-type endopeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN44770_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.36070891099387,"0.00449280418423456","0.0109181158825361","TRINITY_DN44770_c3_g1_i4","GDL38_ARATH^GDL38_ARATH^Q:952-407,H:47-228^76.37%ID^E:1e-96^RecName: Full=GDSL esterase/lipase At2g23540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44770_c3_g1_i4.p1","341-1057[-]","GDL38_ARATH^GDL38_ARATH^Q:5-217,H:14-228^68.98%ID^E:4e-100^RecName: Full=GDSL esterase/lipase At2g23540;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^17^0.777^YES",".","ENOG410ZH2N^GDSL esterase lipase","KEGG:ath:AT2G23540","GO:0005576^cellular_component^extracellular region`GO:0016788^molecular_function^hydrolase activity, acting on ester bonds`GO:0016042^biological_process^lipid catabolic process",".",".","."]
["TRINITY_DN43621_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.35609888438928,"0.0002914156209963","0.000906695582186615","TRINITY_DN43621_c1_g1_i1","ODPB3_ARATH^ODPB3_ARATH^Q:1211-306,H:102-403^93.05%ID^E:0^RecName: Full=Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43621_c1_g1_i1.p1","294-1217[-]","ODPB3_ARATH^ODPB3_ARATH^Q:1-307,H:100-406^92.51%ID^E:0^RecName: Full=Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02779.21^Transket_pyr^Transketolase, pyrimidine binding domain^1-161^E:1.5e-42`PF02780.17^Transketolase_C^Transketolase, C-terminal domain^177-298^E:4.1e-36",".",".","COG0022^Dehydrogenase, E1 component","KEGG:ath:AT2G34590`KO:K00162","GO:0009507^cellular_component^chloroplast`GO:0009941^cellular_component^chloroplast envelope`GO:0004739^molecular_function^pyruvate dehydrogenase (acetyl-transferring) activity`GO:0008270^molecular_function^zinc ion binding`GO:0006096^biological_process^glycolytic process`GO:0048868^biological_process^pollen tube development",".",".","."]
["TRINITY_DN35403_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.35423576331269,"0.000168584936933322","0.000547875883102412","TRINITY_DN35403_c0_g1_i2","DAO_ORYSJ^DAO_ORYSJ^Q:1110-277,H:23-300^48.92%ID^E:3e-91^RecName: Full=2-oxoglutarate-dependent dioxygenase DAO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN35403_c0_g1_i2.p1","265-1167[-]","DAO_ORYSJ^DAO_ORYSJ^Q:20-297,H:23-300^48.92%ID^E:9e-93^RecName: Full=2-oxoglutarate-dependent dioxygenase DAO;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^7-77^E:1.1e-17`PF03171.17^2OG-FeII_Oxy^2OG-Fe(II) oxygenase superfamily^153-246^E:3.2e-15",".",".","COG3491^2OGFe(II) oxygenase","KEGG:osa:4336150","GO:0051213^molecular_function^dioxygenase activity`GO:0046872^molecular_function^metal ion binding`GO:0009852^biological_process^auxin catabolic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44942_c4_g5","leaves S. abrotanoides","leaves S. yangii",1.35213901355994,"0.0142031977678988","0.0302248268371998","TRINITY_DN44942_c4_g5_i1","C86B1_ARATH^C86B1_ARATH^Q:1046-261,H:272-540^73.61%ID^E:2e-118^RecName: Full=Cytochrome P450 86B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44942_c4_g5_i1.p1","228-980[-]","C86B1_ARATH^C86B1_ARATH^Q:4-240,H:299-540^75.21%ID^E:1e-126^RecName: Full=Cytochrome P450 86B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^6-225^E:2.1e-49",".",".","COG2124^Cytochrome p450","KEGG:ath:AT5G23190`KO:K15402","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0071555^biological_process^cell wall organization`GO:0010345^biological_process^suberin biosynthetic process`GO:0042761^biological_process^very long-chain fatty acid biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46854_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.33922256985928,"0.00708862264805727","0.0163764105611458","TRINITY_DN46854_c3_g1_i1","WRKY9_ARATH^WRKY9_ARATH^Q:2-322,H:223-323^74.77%ID^E:2e-46^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46854_c3_g1_i1.p1","2-817[+]","WRKY9_ARATH^WRKY9_ARATH^Q:1-150,H:223-360^64.67%ID^E:6e-58^RecName: Full=Probable WRKY transcription factor 9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^13-71^E:1.1e-27",".",".","ENOG410Y9PF^WRKY transcription factor","KEGG:ath:AT1G68150","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN43209_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.33362847473614,"0.000448923861229683","0.00135123972275575","TRINITY_DN43209_c3_g1_i1","RL192_ARATH^RL192_ARATH^Q:35-526,H:1-164^61.59%ID^E:6e-50^RecName: Full=60S ribosomal protein L19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43209_c3_g1_i1.p2","2-715[+]","RL192_ARATH^RL192_ARATH^Q:12-188,H:1-179^59.22%ID^E:2e-73^RecName: Full=60S ribosomal protein L19-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01280.17^Ribosomal_L19e^Ribosomal protein L19e^15-156^E:3.1e-60",".",".","COG2147^ribosomal protein L19","KEGG:ath:AT3G16780`KO:K02885","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0005886^cellular_component^plasma membrane`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45252_c1_g5","leaves S. abrotanoides","leaves S. yangii",1.32300912089956,"0.00169934198421714","0.00454842930108714","TRINITY_DN45252_c1_g5_i2","DTX24_ARATH^DTX24_ARATH^Q:305-1783,H:16-495^48.28%ID^E:8e-167^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45252_c1_g5_i2.p1","323-1750[+]","DTX24_ARATH^DTX24_ARATH^Q:3-475,H:21-483^49.68%ID^E:7e-170^RecName: Full=Protein DETOXIFICATION 24 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^39-198^E:2.2e-21`PF01554.15^MatE^MatE^262-421^E:1.4e-19",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT3G03620`KO:K03327","GO:0016021^cellular_component^integral component of membrane`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN39283_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.31024831758686,"0.0153774013053703","0.0323943049557986","TRINITY_DN39283_c0_g2_i1","H2AXA_ARATH^H2AXA_ARATH^Q:684-283,H:10-142^85.19%ID^E:8e-51^RecName: Full=Probable histone H2AXa;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39283_c0_g2_i1.p1","280-765[-]","H2AX_CICAR^H2AX_CICAR^Q:23-161,H:2-139^85%ID^E:9e-77^RecName: Full=Histone H2AX;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^22-113^E:2.1e-14`PF00808.20^CBFD_NFYB_HMF^Histone-like transcription factor (CBF/NF-Y) and archaeal histone^49-112^E:0.00014`PF16211.2^Histone_H2A_C^C-terminus of histone H2A^116-149^E:8.4e-18",".",".",".","KEGG:cam:101514555`KO:K11251","GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN46314_c3_g2","leaves S. abrotanoides","leaves S. yangii",1.30230867791217,"0.000752799500403315","0.00216589010594368","TRINITY_DN46314_c3_g2_i1","APS1_ARATH^APS1_ARATH^Q:1508-273,H:50-461^83.01%ID^E:0^RecName: Full=ATP sulfurylase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46314_c3_g2_i1.p1","264-1652[-]","APS1_ARATH^APS1_ARATH^Q:1-460,H:4-461^76.72%ID^E:0^RecName: Full=ATP sulfurylase 1, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14306.3^PUA_2^PUA-like domain^50-212^E:4.5e-46`PF01747.14^ATP-sulfurylase^ATP-sulfurylase^222-444^E:3.5e-65",".",".","COG2046^Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur- containing amino acids (By similarity)","KEGG:ath:AT3G22890`KO:K13811","GO:0009507^cellular_component^chloroplast`GO:0009570^cellular_component^chloroplast stroma`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004781^molecular_function^sulfate adenylyltransferase (ATP) activity`GO:0070814^biological_process^hydrogen sulfide biosynthetic process`GO:0046686^biological_process^response to cadmium ion`GO:0009735^biological_process^response to cytokinin`GO:0001887^biological_process^selenium compound metabolic process`GO:0000103^biological_process^sulfate assimilation","GO:0004781^molecular_function^sulfate adenylyltransferase (ATP) activity",".","."]
["TRINITY_DN45567_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.30099963272937,"0.000846029594908879","0.00240938682507322","TRINITY_DN45567_c0_g1_i11","R1B23_SOLDE^R1B23_SOLDE^Q:29-439,H:1050-1185^33.33%ID^E:2e-08^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45567_c0_g1_i11.p1","2-454[+]","R1B23_SOLDE^R1B23_SOLDE^Q:10-146,H:1050-1185^33.33%ID^E:2e-08^RecName: Full=Putative late blight resistance protein homolog R1B-23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN44186_c2_g1","leaves S. abrotanoides","leaves S. yangii",1.29897769241569,"0.0102217374392935","0.0226348124685423","TRINITY_DN44186_c2_g1_i3","DFRA_ANTMA^DFRA_ANTMA^Q:1108-341,H:155-382^68.36%ID^E:5e-115^RecName: Full=Dihydroflavonol-4-reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum",".","TRINITY_DN44186_c2_g1_i3.p1","329-664[-]","DFRA_ANTMA^DFRA_ANTMA^Q:1-108,H:278-382^62.96%ID^E:4e-38^RecName: Full=Dihydroflavonol-4-reductase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Plantaginaceae; Antirrhineae; Antirrhinum",".",".",".",".",".","GO:0050662^molecular_function^coenzyme binding`GO:0045552^molecular_function^dihydrokaempferol 4-reductase activity`GO:0009718^biological_process^anthocyanin-containing compound biosynthetic process",".",".","."]
["TRINITY_DN47755_c2_g5","leaves S. abrotanoides","leaves S. yangii",1.29875957180157,"0.00035746764106937","0.00109626766431612","TRINITY_DN47755_c2_g5_i1","Y3471_ARATH^Y3471_ARATH^Q:192-437,H:29-119^38.04%ID^E:6e-11^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47755_c2_g5_i1.p1","126-437[+]","Y3471_ARATH^Y3471_ARATH^Q:23-104,H:29-119^38.04%ID^E:3e-11^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47110","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity",".",".","."]
["TRINITY_DN16272_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.29814276079171,"0.0193766576201663","0.0397326568288991","TRINITY_DN16272_c0_g1_i2","THNL2_ARATH^THNL2_ARATH^Q:175-495,H:1-113^38.26%ID^E:2e-13^RecName: Full=Thionin-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN16272_c0_g1_i2.p1","157-513[+]","THNL2_ARATH^THNL2_ARATH^Q:7-113,H:1-113^38.26%ID^E:2e-14^RecName: Full=Thionin-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","sigP:1^22^0.774^YES",".","ENOG4111ECS^to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660","KEGG:ath:AT1G12663","GO:0005576^cellular_component^extracellular region`GO:0006952^biological_process^defense response",".",".","."]
["TRINITY_DN46275_c4_g4","leaves S. abrotanoides","leaves S. yangii",1.29756818259392,{"v":7686716758.43771,"d":"7.69E+09"},"0.000264784956016805","TRINITY_DN46275_c4_g4_i1","HMDH1_HEVBR^HMDH1_HEVBR^Q:872-3,H:18-324^68.73%ID^E:1e-144^RecName: Full=3-hydroxy-3-methylglutaryl-coenzyme A reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea",".","TRINITY_DN46275_c4_g4_i1.p1","3-950[-]","HMDH1_SOLTU^HMDH1_SOLTU^Q:1-316,H:1-348^62.89%ID^E:1e-147^RecName: Full=3-hydroxy-3-methylglutaryl-coenzyme A reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00368.15^HMG-CoA_red^Hydroxymethylglutaryl-coenzyme A reductase^181-316^E:2.9e-39",".",".",".","KEGG:sot:102577654`KO:K00021","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0004420^molecular_function^hydroxymethylglutaryl-CoA reductase (NADPH) activity`GO:0050661^molecular_function^NADP binding`GO:0015936^biological_process^coenzyme A metabolic process`GO:0008299^biological_process^isoprenoid biosynthetic process","GO:0004420^molecular_function^hydroxymethylglutaryl-CoA reductase (NADPH) activity`GO:0050662^molecular_function^coenzyme binding`GO:0015936^biological_process^coenzyme A metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44285_c6_g2","leaves S. abrotanoides","leaves S. yangii",1.29739195951226,"0.0183482355473754","0.0378830344024797","TRINITY_DN44285_c6_g2_i2","M310_ARATH^M310_ARATH^Q:287-568,H:59-152^45.74%ID^E:7e-19^RecName: Full=Uncharacterized mitochondrial protein AtMg00310;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44285_c6_g2_i2.p1","598-1608[+]","RNHX1_ARATH^RNHX1_ARATH^Q:12-336,H:220-541^21.36%ID^E:7e-10^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13966.3^zf-RVT^zinc-binding in reverse transcriptase^80-151^E:5.3e-20`PF13456.3^RVT_3^Reverse transcriptase-like^286-335^E:1.7e-07",".",".",".",".","GO:0046872^molecular_function^metal ion binding`GO:0003676^molecular_function^nucleic acid binding`GO:0004523^molecular_function^RNA-DNA hybrid ribonuclease activity",".",".","."]
["TRINITY_DN38682_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.29266131482059,"0.000329033001059038","0.00101463879975351","TRINITY_DN38682_c0_g1_i2","TBL36_ARATH^TBL36_ARATH^Q:1380-349,H:29-374^62.18%ID^E:3e-157^RecName: Full=Protein trichome birefringence-like 36;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38682_c0_g1_i2.p1","346-1479[-]","TBL36_ARATH^TBL36_ARATH^Q:11-377,H:8-374^59.41%ID^E:4e-160^RecName: Full=Protein trichome birefringence-like 36;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14416.3^PMR5N^PMR5 N terminal Domain^54-104^E:8.8e-19`PF13839.3^PC-Esterase^GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p^106-376^E:1.9e-84","sigP:1^24^0.776^YES",".","ENOG410YEHD^Pfam:DUF231","KEGG:ath:AT3G54260","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0016413^molecular_function^O-acetyltransferase activity`GO:0071554^biological_process^cell wall organization or biogenesis",".",".","."]
["TRINITY_DN43499_c1_g5","leaves S. abrotanoides","leaves S. yangii",1.28751698505294,{"v":9699442876.50433,"d":"9.70E+09"},"0.000328965216811535","TRINITY_DN43499_c1_g5_i7","RS141_MAIZE^RS141_MAIZE^Q:553-182,H:15-138^87.1%ID^E:1e-51^RecName: Full=40S ribosomal protein S14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN43499_c1_g5_i7.p1","146-601[-]","RS14_CHLRE^RS14_CHLRE^Q:1-140,H:1-142^83.8%ID^E:2e-79^RecName: Full=40S ribosomal protein S14;^Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas","PF00411.16^Ribosomal_S11^Ribosomal protein S11^29-147^E:2.1e-47",".",".","COG0100^Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (By similarity)","KEGG:cre:CHLREDRAFT_24344`KO:K02955","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN44616_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.28688349924064,"0.000518774663899582","0.00154124703666933","TRINITY_DN44616_c0_g1_i1","IP5P7_ARATH^IP5P7_ARATH^Q:1905-529,H:94-590^66.53%ID^E:0^RecName: Full=Type IV inositol polyphosphate 5-phosphatase 7 {ECO:0000303|PubMed:21677096};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44616_c0_g1_i1.p1","514-1905[-]","IP5P7_ARATH^IP5P7_ARATH^Q:1-463,H:94-594^66.4%ID^E:0^RecName: Full=Type IV inositol polyphosphate 5-phosphatase 7 {ECO:0000303|PubMed:21677096};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03372.20^Exo_endo_phos^Endonuclease/Exonuclease/phosphatase family^3-415^E:9.8e-38",".",".","COG5411^inositol","KEGG:ath:AT2G32010","GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0034485^molecular_function^phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity`GO:0004439^molecular_function^phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity`GO:0071472^biological_process^cellular response to salt stress`GO:0010305^biological_process^leaf vascular tissue pattern formation`GO:0046856^biological_process^phosphatidylinositol dephosphorylation`GO:2000377^biological_process^regulation of reactive oxygen species metabolic process",".",".","."]
["TRINITY_DN45228_c2_g1","leaves S. abrotanoides","leaves S. yangii",1.28397799287287,"0.00239566426935854","0.00621286252989673","TRINITY_DN45228_c2_g1_i1","KCS5_ARATH^KCS5_ARATH^Q:917-3,H:89-393^86.23%ID^E:0^RecName: Full=3-ketoacyl-CoA synthase 5 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45228_c2_g1_i1.p1","3-917[-]","KCS5_ARATH^KCS5_ARATH^Q:1-305,H:89-393^86.23%ID^E:0^RecName: Full=3-ketoacyl-CoA synthase 5 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08392.9^FAE1_CUT1_RppA^FAE1/Type III polyketide synthase-like protein^1-276^E:2.4e-131",".",".","ENOG410Y5VH^3-ketoacyl-coa synthase","KEGG:ath:AT1G25450`KO:K15397","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0009922^molecular_function^fatty acid elongase activity`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0048868^biological_process^pollen tube development`GO:0009409^biological_process^response to cold`GO:0009416^biological_process^response to light stimulus","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46064_c3_g6","leaves S. abrotanoides","leaves S. yangii",1.28008080200178,"0.00189451382233426","0.00501716662217298","TRINITY_DN46064_c3_g6_i1","FBD28_ARATH^FBD28_ARATH^Q:234-992,H:2-271^29.03%ID^E:3e-14^RecName: Full=Putative FBD-associated F-box protein At5g56690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46064_c3_g6_i1.p1","171-1220[+]","FBD28_ARATH^FBD28_ARATH^Q:22-274,H:2-271^29.03%ID^E:2e-14^RecName: Full=Putative FBD-associated F-box protein At5g56690;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^24-60^E:0.0034`PF07723.10^LRR_2^Leucine Rich Repeat^172-196^E:0.019",".",".","ENOG41116XT^NA","KEGG:ath:AT5G56690",".","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN40610_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.27817073465027,"0.000752262512191937","0.00216463115375542","TRINITY_DN40610_c0_g1_i1","C7111_SOLLC^C7111_SOLLC^Q:1795-359,H:13-500^70.96%ID^E:0^RecName: Full=Cytochrome P450 710A11 {ECO:0000303|PubMed:16531502};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN40610_c0_g1_i1.p1","341-1822[-]","C7111_SOLLC^C7111_SOLLC^Q:6-488,H:9-500^70.59%ID^E:0^RecName: Full=Cytochrome P450 710A11 {ECO:0000303|PubMed:16531502};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00067.19^p450^Cytochrome P450^35-450^E:3.9e-44",".",".","COG2124^Cytochrome p450",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN39369_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.27270644396824,"0.0222631315314926","0.044785423685026","TRINITY_DN39369_c0_g1_i2","MT878_ARATH^MT878_ARATH^Q:175-1203,H:5-361^39.61%ID^E:1e-68^RecName: Full=Probable S-adenosylmethionine-dependent methyltransferase At5g38780;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39369_c0_g1_i2.p1","172-1206[+]","MT878_ARATH^MT878_ARATH^Q:2-344,H:5-361^39.61%ID^E:5e-76^RecName: Full=Probable S-adenosylmethionine-dependent methyltransferase At5g38780;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03492.12^Methyltransf_7^SAM dependent carboxyl methyltransferase^50-343^E:2.9e-92",".",".","ENOG41108KW^SAM dependent carboxyl methyltransferase","KEGG:ath:AT5G38780","GO:0008168^molecular_function^methyltransferase activity","GO:0008168^molecular_function^methyltransferase activity",".","."]
["TRINITY_DN43688_c4_g2","leaves S. abrotanoides","leaves S. yangii",1.26408299307454,"0.00554266395769305","0.0131423244054022","TRINITY_DN43688_c4_g2_i5",".",".","TRINITY_DN43688_c4_g2_i5.p1","348-851[-]","AP2L1_ARATH^AP2L1_ARATH^Q:5-165,H:207-342^35.19%ID^E:2e-14^RecName: Full=AP2-like ethylene-responsive transcription factor At1g16060;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410Y9PK^Transcription factor","KEGG:ath:AT1G16060`KO:K09285","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0000981^molecular_function^RNA polymerase II transcription factor activity, sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0007275^biological_process^multicellular organism development`GO:0010187^biological_process^negative regulation of seed germination`GO:1901959^biological_process^positive regulation of cutin biosynthetic process`GO:0045723^biological_process^positive regulation of fatty acid biosynthetic process`GO:0040008^biological_process^regulation of growth`GO:0006357^biological_process^regulation of transcription from RNA polymerase II promoter`GO:0009737^biological_process^response to abscisic acid`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN46982_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.26329181310852,"0.000657511040151579","0.00191194516403051","TRINITY_DN46982_c1_g1_i3","WAK2_ARATH^WAK2_ARATH^Q:1052-171,H:29-277^26.94%ID^E:4e-22^RecName: Full=Wall-associated receptor kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46982_c1_g1_i3.p1","165-1187[-]","WAK2_ARATH^WAK2_ARATH^Q:45-339,H:28-277^26.85%ID^E:1e-22^RecName: Full=Wall-associated receptor kinase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13947.3^GUB_WAK_bind^Wall-associated receptor kinase galacturonan-binding^44-157^E:2.8e-20","sigP:1^45^0.496^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G21270","GO:0005623^cellular_component^cell`GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0005509^molecular_function^calcium ion binding`GO:0030247^molecular_function^polysaccharide binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009992^biological_process^cellular water homeostasis`GO:0009311^biological_process^oligosaccharide metabolic process`GO:0009751^biological_process^response to salicylic acid`GO:0009826^biological_process^unidimensional cell growth","GO:0030247^molecular_function^polysaccharide binding",".","."]
["TRINITY_DN44483_c5_g1","leaves S. abrotanoides","leaves S. yangii",1.25988424281666,"0.00863970915654728","0.0194722106587993","TRINITY_DN44483_c5_g1_i8","CCD31_ARATH^CCD31_ARATH^Q:1713-910,H:11-282^58.46%ID^E:1e-98^RecName: Full=Cyclin-D3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44483_c5_g1_i8.p1","871-1722[-]","CCD31_ARATH^CCD31_ARATH^Q:4-271,H:11-282^58.46%ID^E:3e-106^RecName: Full=Cyclin-D3-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^74-176^E:6.6e-28`PF02984.16^Cyclin_C^Cyclin, C-terminal domain^178-272^E:3.1e-16",".",".","ENOG410XRKC^(DC) complex that phosphorylates and inhibits members of the retinoblastoma (RB) protein family including RB1 and regulates the cell-cycle during G(1) S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB E2F complex and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also substrate for SMAD3, phosphorylating SMAD3 in a cell-cycle-dependent manner and repressing its transcriptional activity. Component of the ternary complex, cyclin","KEGG:ath:AT4G34160`KO:K14505","GO:0005634^cellular_component^nucleus`GO:0051301^biological_process^cell division`GO:0000082^biological_process^G1/S transition of mitotic cell cycle`GO:0007067^biological_process^mitotic nuclear division`GO:0009735^biological_process^response to cytokinin`GO:0009744^biological_process^response to sucrose`GO:0048316^biological_process^seed development","GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN43800_c4_g9","leaves S. abrotanoides","leaves S. yangii",1.2586854217715,"0.00126023680549154","0.00346732325028718","TRINITY_DN43800_c4_g9_i1","PP369_ARATH^PP369_ARATH^Q:1759-215,H:14-530^53.97%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g08305;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43800_c4_g9_i1.p1","200-1822[-]","PP369_ARATH^PP369_ARATH^Q:22-536,H:14-530^53.97%ID^E:0^RecName: Full=Pentatricopeptide repeat-containing protein At5g08305;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13812.3^PPR_3^Pentatricopeptide repeat domain^81-124^E:0.008`PF01535.17^PPR^PPR repeat^83-112^E:0.013`PF01535.17^PPR^PPR repeat^153-181^E:5.4e-05`PF01535.17^PPR^PPR repeat^183-212^E:1.4e-07`PF13812.3^PPR_3^Pentatricopeptide repeat domain^211-255^E:0.0042`PF13041.3^PPR_2^PPR repeat family^212-258^E:1.5e-08`PF01535.17^PPR^PPR repeat^214-243^E:8e-07`PF01535.17^PPR^PPR repeat^287-310^E:0.028`PF13812.3^PPR_3^Pentatricopeptide repeat domain^313-361^E:0.0042`PF13041.3^PPR_2^PPR repeat family^315-362^E:3.6e-12`PF01535.17^PPR^PPR repeat^319-347^E:4.1e-06`PF01535.17^PPR^PPR repeat^352-381^E:0.0065`PF01535.17^PPR^PPR repeat^389-413^E:0.0031",".",".","ENOG410Z7Z7^Pentatricopeptide repeat-containing protein","KEGG:ath:AT5G08305",".",".",".","."]
["TRINITY_DN46220_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.25866508857403,"0.000439008740454012","0.00132395793831657","TRINITY_DN46220_c3_g1_i4","ATPG3_IPOBA^ATPG3_IPOBA^Q:685-425,H:96-182^77.01%ID^E:3e-35^RecName: Full=ATP synthase subunit gamma, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea",".","TRINITY_DN46220_c3_g1_i4.p1","215-703[-]","ATPG3_IPOBA^ATPG3_IPOBA^Q:14-93,H:103-182^82.5%ID^E:2e-38^RecName: Full=ATP synthase subunit gamma, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea","PF00231.16^ATP-synt^ATP synthase^12-86^E:2.6e-09",".",".",".",".","GO:0005743^cellular_component^mitochondrial inner membrane`GO:0045261^cellular_component^proton-transporting ATP synthase complex, catalytic core F(1)`GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0046961^molecular_function^proton-transporting ATPase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport","GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0046961^molecular_function^proton-transporting ATPase activity, rotational mechanism`GO:0015986^biological_process^ATP synthesis coupled proton transport`GO:0045261^cellular_component^proton-transporting ATP synthase complex, catalytic core F(1)",".","."]
["TRINITY_DN42962_c0_g3","leaves S. abrotanoides","leaves S. yangii",1.25335024716498,"0.00580924464896203","0.0137221190048274","TRINITY_DN42962_c0_g3_i1","CKX1_ARATH^CKX1_ARATH^Q:1095-259,H:266-544^62.37%ID^E:9e-130^RecName: Full=Cytokinin dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42962_c0_g3_i1.p1","250-1182[-]","CKX1_ARATH^CKX1_ARATH^Q:30-308,H:266-544^62.37%ID^E:4e-131^RecName: Full=Cytokinin dehydrogenase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF09265.7^Cytokin-bind^Cytokinin dehydrogenase 1, FAD and cytokinin binding^29-303^E:3e-110",".",".","COG0277^FAD linked oxidase domain protein","KEGG:ath:AT2G41510`KO:K00279","GO:0005773^cellular_component^vacuole`GO:0019139^molecular_function^cytokinin dehydrogenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors`GO:0009823^biological_process^cytokinin catabolic process`GO:0048507^biological_process^meristem development","GO:0019139^molecular_function^cytokinin dehydrogenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0009690^biological_process^cytokinin metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43045_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.24266035788087,"0.00613579748631506","0.0144028519261561","TRINITY_DN43045_c0_g1_i3","RMR1_ORYSJ^RMR1_ORYSJ^Q:300-1148,H:4-283^63.73%ID^E:1e-121^RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43045_c0_g1_i3.p1","306-1520[+]","RMR1_ORYSJ^RMR1_ORYSJ^Q:2-298,H:7-300^64.09%ID^E:5e-133^RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF02225.19^PA^PA domain^82-142^E:1.2e-07`PF13639.3^zf-RING_2^Ring finger domain^233-276^E:6.7e-13`PF17123.2^zf-RING_11^RING-like zinc finger^234-261^E:1.2e-09`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^234-275^E:5.4e-07`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^234-275^E:5.4e-07`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^234-264^E:0.0018",".",".","ENOG410Z5DF^Ring finger protein","KEGG:osa:4331745`KO:K15692","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0031902^cellular_component^late endosome membrane`GO:0032586^cellular_component^protein storage vacuole membrane`GO:0008270^molecular_function^zinc ion binding`GO:0015031^biological_process^protein transport","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN45308_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.24086978989039,"0.00353728766700123","0.00881447718714634","TRINITY_DN45308_c3_g1_i22","FRS5_ARATH^FRS5_ARATH^Q:2390-3346,H:313-631^31.08%ID^E:8e-41^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FRS5_ARATH^FRS5_ARATH^Q:1510-1935,H:71-209^27.08%ID^E:6e-07^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FRS5_ARATH^FRS5_ARATH^Q:1973-2113,H:222-268^29.79%ID^E:6e-07^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45308_c3_g1_i22.p1","2609-3364[+]","FRS5_ARATH^FRS5_ARATH^Q:2-246,H:388-631^28.8%ID^E:2e-24^RecName: Full=Protein FAR1-RELATED SEQUENCE 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZJSX^protein FAR1-RELATED SEQUENCE 5-like","KEGG:ath:AT4G38180","GO:0005634^cellular_component^nucleus`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".",".","."]
["TRINITY_DN46960_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.23753460885275,"0.0127485185503019","0.0275001231339681","TRINITY_DN46960_c0_g1_i2","M820_ARATH^M820_ARATH^Q:177-398,H:32-108^41.56%ID^E:5e-08^RecName: Full=Uncharacterized mitochondrial protein AtMg00820;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46960_c0_g1_i2.p1","458-757[+]","POLX_TOBAC^POLX_TOBAC^Q:5-100,H:927-1021^32.99%ID^E:2e-12^RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF07727.11^RVT_2^Reverse transcriptase (RNA-dependent DNA polymerase)^4-99^E:2.1e-26",".",".",".",".","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0004519^molecular_function^endonuclease activity`GO:0003676^molecular_function^nucleic acid binding`GO:0003964^molecular_function^RNA-directed DNA polymerase activity`GO:0008270^molecular_function^zinc ion binding`GO:0015074^biological_process^DNA integration",".",".","."]
["TRINITY_DN47694_c2_g2","leaves S. abrotanoides","leaves S. yangii",1.23340378653113,"0.00106958858593815","0.00298426728219084","TRINITY_DN47694_c2_g2_i7","TPSCM_MENPI^TPSCM_MENPI^Q:40-288,H:1-86^74.42%ID^E:5e-39^RecName: Full=Cis-muuroladiene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha`TPSCM_MENPI^TPSCM_MENPI^Q:300-395,H:100-131^53.12%ID^E:5e-39^RecName: Full=Cis-muuroladiene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha",".","TRINITY_DN47694_c2_g2_i7.p1","40-426[+]","TPSCM_MENPI^TPSCM_MENPI^Q:1-83,H:1-86^74.42%ID^E:6e-38^RecName: Full=Cis-muuroladiene synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Mentha","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^26-91^E:7.1e-09",".",".",".","KEGG:ag:CAH10288`KO:K15809","GO:0005737^cellular_component^cytoplasm`GO:0000287^molecular_function^magnesium ion binding`GO:0010333^molecular_function^terpene synthase activity`GO:0006952^biological_process^defense response`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46097_c5_g3","leaves S. abrotanoides","leaves S. yangii",1.22836124238892,"0.000113774096623179","0.00038171657626149","TRINITY_DN46097_c5_g3_i2","PTR19_ARATH^PTR19_ARATH^Q:1917-301,H:30-584^65.47%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 4.6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46097_c5_g3_i2.p1","280-1917[-]","PTR19_ARATH^PTR19_ARATH^Q:1-539,H:30-584^66.79%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 4.6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^69-495^E:6.4e-101",".",".","COG3104^transporter","KEGG:ath:AT1G69850","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0090440^molecular_function^abscisic acid transporter activity`GO:0015293^molecular_function^symporter activity`GO:0080168^biological_process^abscisic acid transport`GO:0042128^biological_process^nitrate assimilation`GO:0010119^biological_process^regulation of stomatal movement`GO:0009624^biological_process^response to nematode","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN39753_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.22627927188359,"0.000807392021970351","0.00230831852499769","TRINITY_DN39753_c0_g1_i4","NFYB8_ARATH^NFYB8_ARATH^Q:209-718,H:8-173^79.77%ID^E:5e-84^RecName: Full=Nuclear transcription factor Y subunit B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39753_c0_g1_i4.p1","173-721[+]","NFYB8_ARATH^NFYB8_ARATH^Q:13-182,H:8-173^79.77%ID^E:1e-86^RecName: Full=Nuclear transcription factor Y subunit B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00808.20^CBFD_NFYB_HMF^Histone-like transcription factor (CBF/NF-Y) and archaeal histone^37-101^E:6.6e-28",".",".","COG2036^Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling","KEGG:ath:AT2G37060","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47513_c1_g5","leaves S. abrotanoides","leaves S. yangii",1.22483776655768,"0.00457098376382778","0.0110833630816911","TRINITY_DN47513_c1_g5_i1","R1B17_SOLDE^R1B17_SOLDE^Q:634-50,H:539-734^36.55%ID^E:5e-28^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47513_c1_g5_i1.p1","2-886[-]","R1B17_SOLDE^R1B17_SOLDE^Q:85-290,H:539-745^37.5%ID^E:5e-32^RecName: Full=Putative late blight resistance protein homolog R1B-17;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^95-290^E:1.7e-41",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44333_c2_g14","leaves S. abrotanoides","leaves S. yangii",1.22376497180933,"0.000409259186907073","0.00124076991586113","TRINITY_DN44333_c2_g14_i1","U74E2_ARATH^U74E2_ARATH^Q:1429-179,H:24-450^41.86%ID^E:3e-105^RecName: Full=UDP-glycosyltransferase 74E2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44333_c2_g14_i1.p1","125-1207[-]","U74E1_ARATH^U74E1_ARATH^Q:5-343,H:104-450^46.84%ID^E:1e-103^RecName: Full=UDP-glycosyltransferase 74E1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^146-280^E:3.2e-22",".",".","COG1819^Transferase","KEGG:ath:AT1G05675","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN46747_c2_g5","leaves S. abrotanoides","leaves S. yangii",1.21663561181317,{"v":935124992.50989,"d":"9.35E+08"},"0.000318097353334016","TRINITY_DN46747_c2_g5_i2","SCPDL_ARATH^SCPDL_ARATH^Q:361-1035,H:1-227^69.6%ID^E:3e-103^RecName: Full=Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46747_c2_g5_i2.p1","337-1083[+]","SCPDL_ARATH^SCPDL_ARATH^Q:9-233,H:1-227^69.6%ID^E:6e-105^RecName: Full=Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03435.15^Sacchrp_dh_NADP^Saccharopine dehydrogenase NADP binding domain^21-155^E:4.3e-14",".",".","COG3268^saccharopine dehydrogenase","KEGG:ath:AT5G39410","GO:0009941^cellular_component^chloroplast envelope`GO:0016020^cellular_component^membrane`GO:0031966^cellular_component^mitochondrial membrane`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0005774^cellular_component^vacuolar membrane`GO:0005773^cellular_component^vacuole`GO:0016491^molecular_function^oxidoreductase activity","GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43798_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.21334343032677,"0.000280781347315016","0.000876144032163536","TRINITY_DN43798_c3_g1_i3","U74E1_ARATH^U74E1_ARATH^Q:890-201,H:218-450^57.08%ID^E:5e-83^RecName: Full=UDP-glycosyltransferase 74E1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`U74E1_ARATH^U74E1_ARATH^Q:2197-1511,H:5-224^35.9%ID^E:1e-33^RecName: Full=UDP-glycosyltransferase 74E1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43798_c3_g1_i3.p2","177-884[-]","U74E1_ARATH^U74E1_ARATH^Q:7-228,H:226-450^58.67%ID^E:2e-89^RecName: Full=UDP-glycosyltransferase 74E1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^42-193^E:2.8e-26",".",".","COG1819^Transferase","KEGG:ath:AT1G05675","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN6346_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.20875004482102,"0.00663554242009594","0.0154361432323898","TRINITY_DN6346_c0_g1_i2","NFD4_ARATH^NFD4_ARATH^Q:1752-244,H:43-564^35.39%ID^E:5e-71^RecName: Full=Protein NUCLEAR FUSION DEFECTIVE 4 {ECO:0000303|PubMed:16698901};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN6346_c0_g1_i2.p1","214-1761[-]","NFD4_ARATH^NFD4_ARATH^Q:4-506,H:43-564^36.64%ID^E:4e-89^RecName: Full=Protein NUCLEAR FUSION DEFECTIVE 4 {ECO:0000303|PubMed:16698901};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF06813.10^Nodulin-like^Nodulin-like^4-251^E:7e-71","sigP:1^22^0.702^YES",".","ENOG41105RT^Nodulin-like","KEGG:ath:AT1G31470","GO:0016021^cellular_component^integral component of membrane`GO:0000741^biological_process^karyogamy`GO:0010197^biological_process^polar nucleus fusion`GO:0009651^biological_process^response to salt stress`GO:0006810^biological_process^transport",".",".","."]
["TRINITY_DN4225_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.20503791726545,"0.0123061488122475","0.0266594452529974","TRINITY_DN4225_c0_g1_i1","XCP1_ARATH^XCP1_ARATH^Q:1233-193,H:9-355^70.89%ID^E:0^RecName: Full=Xylem cysteine proteinase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN4225_c0_g1_i1.p1","190-1251[-]","XCP1_ARATH^XCP1_ARATH^Q:7-353,H:9-355^70.89%ID^E:0^RecName: Full=Xylem cysteine proteinase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08246.9^Inhibitor_I29^Cathepsin propeptide inhibitor domain (I29)^49-105^E:1.2e-18`PF00112.20^Peptidase_C1^Papain family cysteine protease^135-349^E:2.2e-81","sigP:1^26^0.715^YES",".","COG4870^cathepsin","KEGG:ath:AT4G35350`KO:K16290","GO:0005615^cellular_component^extracellular space`GO:0005764^cellular_component^lysosome`GO:0005634^cellular_component^nucleus`GO:0000325^cellular_component^plant-type vacuole`GO:0005886^cellular_component^plasma membrane`GO:0004197^molecular_function^cysteine-type endopeptidase activity`GO:0010623^biological_process^developmental programmed cell death`GO:0051603^biological_process^proteolysis involved in cellular protein catabolic process","GO:0008234^molecular_function^cysteine-type peptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN45652_c3_g2","leaves S. abrotanoides","leaves S. yangii",1.19171796529922,"0.00103358314403277","0.00289121780295087","TRINITY_DN45652_c3_g2_i1","Y2242_ARATH^Y2242_ARATH^Q:548-3103,H:3-853^63.64%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At2g24230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45652_c3_g2_i1.p1","548-3118[+]","Y2242_ARATH^Y2242_ARATH^Q:1-852,H:3-853^63.91%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At2g24230;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^45-57^E:0.12`PF13855.3^LRR_8^Leucine rich repeat^76-121^E:4.6e-09`PF00560.30^LRR_1^Leucine Rich Repeat^87-107^E:1.4`PF13855.3^LRR_8^Leucine rich repeat^182-240^E:2.1e-06`PF00560.30^LRR_1^Leucine Rich Repeat^328-350^E:0.52`PF13516.3^LRR_6^Leucine Rich repeat^349-365^E:2`PF00069.22^Pkinase^Protein kinase domain^546-840^E:2.5e-33`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^548-841^E:1e-33","sigP:1^22^0.795^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT2G24230","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN41189_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.18774598045096,"0.00163222841755672","0.00438496502947316","TRINITY_DN41189_c0_g1_i2","ALMT8_ARATH^ALMT8_ARATH^Q:1240-1563,H:126-234^55.05%ID^E:1e-29^RecName: Full=Aluminum-activated malate transporter 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALMT8_ARATH^ALMT8_ARATH^Q:1845-2012,H:265-330^54.55%ID^E:3e-12^RecName: Full=Aluminum-activated malate transporter 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`ALMT8_ARATH^ALMT8_ARATH^Q:2126-2443,H:306-419^42.98%ID^E:3e-12^RecName: Full=Aluminum-activated malate transporter 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41189_c0_g1_i2.p2","635-991[+]","ALMT7_ARATH^ALMT7_ARATH^Q:28-95,H:1-68^63.24%ID^E:5e-24^RecName: Full=Aluminum-activated malate transporter 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11744.5^ALMT^Aluminium activated malate transporter^40-95^E:7.6e-27",".",".","ENOG410XR8V^aluminum-activated malate transporter","KEGG:ath:AT2G27240","GO:0016021^cellular_component^integral component of membrane`GO:0015743^biological_process^malate transport","GO:0015743^biological_process^malate transport",".","."]
["TRINITY_DN45984_c0_g3","leaves S. abrotanoides","leaves S. yangii",1.18715919023261,"0.00102122712775559","0.00286217009650536","TRINITY_DN45984_c0_g3_i2","MYB44_ARATH^MYB44_ARATH^Q:276-575,H:6-105^67%ID^E:2e-40^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45984_c0_g3_i2.p1","159-1379[+]","MYB44_ARATH^MYB44_ARATH^Q:38-139,H:4-105^65.69%ID^E:9e-43^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^40-85^E:5.2e-15`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^43-101^E:3.6e-13`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^92-136^E:5.3e-16`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^95-139^E:7.5e-09",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT5G67300`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:2000022^biological_process^regulation of jasmonic acid mediated signaling pathway`GO:2000031^biological_process^regulation of salicylic acid mediated signaling pathway`GO:0009737^biological_process^response to abscisic acid`GO:0009733^biological_process^response to auxin`GO:0046686^biological_process^response to cadmium ion`GO:0010200^biological_process^response to chitin`GO:0009723^biological_process^response to ethylene`GO:0009739^biological_process^response to gibberellin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN47732_c1_g9","leaves S. abrotanoides","leaves S. yangii",1.17640156726135,"0.00880218015528002","0.019805587547904","TRINITY_DN47732_c1_g9_i1","RPS2_ARATH^RPS2_ARATH^Q:498-178,H:794-904^32.43%ID^E:1e-08^RecName: Full=Disease resistance protein RPS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47732_c1_g9_i1.p1","160-513[-]","RPS2_ARATH^RPS2_ARATH^Q:6-112,H:794-904^32.43%ID^E:6e-09^RecName: Full=Disease resistance protein RPS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G26090`KO:K13459","GO:0005737^cellular_component^cytoplasm`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response`GO:0042742^biological_process^defense response to bacterium`GO:0016045^biological_process^detection of bacterium`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN45498_c6_g5","leaves S. abrotanoides","leaves S. yangii",1.17440391106798,"0.0185622904065218","0.0382886804956049","TRINITY_DN45498_c6_g5_i1","R1A6_SOLDE^R1A6_SOLDE^Q:2-460,H:471-633^32.32%ID^E:7e-13^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45498_c6_g5_i1.p1","41-475[+]","R1A3_SOLDE^R1A3_SOLDE^Q:26-140,H:9-129^34.71%ID^E:1e-12^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^44-140^E:6e-17",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN46731_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.17280721847767,"0.00453808623957999","0.0110097258808484","TRINITY_DN46731_c1_g1_i7","R1B11_SOLDE^R1B11_SOLDE^Q:30-344,H:1072-1176^42.06%ID^E:1e-10^RecName: Full=Putative late blight resistance protein homolog R1B-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46731_c1_g1_i7.p1","3-356[+]","R1B11_SOLDE^R1B11_SOLDE^Q:10-114,H:1072-1176^42.06%ID^E:1e-10^RecName: Full=Putative late blight resistance protein homolog R1B-11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0046872^molecular_function^metal ion binding`GO:0030001^biological_process^metal ion transport`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN23652_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.16192354035779,"0.00412443557075444","0.0101234877823929","TRINITY_DN23652_c0_g1_i1","RL262_ARATH^RL262_ARATH^Q:24-374,H:7-123^55.56%ID^E:1e-38^RecName: Full=60S ribosomal protein L26-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN23652_c0_g1_i1.p2","3-419[+]","RL262_ARATH^RL262_ARATH^Q:8-124,H:7-123^55.56%ID^E:5e-39^RecName: Full=60S ribosomal protein L26-2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF16906.2^Ribosomal_L26^Ribosomal proteins L26 eukaryotic, L24P archaeal^9-122^E:1.1e-26`PF00467.26^KOW^KOW motif^52-83^E:2.7e-07",".",".","COG0198^One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (By similarity)","KEGG:ath:AT5G67510`KO:K02898","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0022626^cellular_component^cytosolic ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0015934^cellular_component^large ribosomal subunit",".","."]
["TRINITY_DN37153_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.15970533820481,"0.010441618409461","0.0230467105167363","TRINITY_DN37153_c0_g1_i1","BB_ARATH^BB_ARATH^Q:29-334,H:138-241^48.08%ID^E:7e-19^RecName: Full=E3 ubiquitin ligase BIG BROTHER;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN37153_c0_g1_i1.p1","2-349[+]","BB_ARATH^BB_ARATH^Q:11-111,H:139-241^55.34%ID^E:5e-32^RecName: Full=E3 ubiquitin ligase BIG BROTHER;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12678.4^zf-rbx1^RING-H2 zinc finger domain^61-108^E:2e-08`PF13639.3^zf-RING_2^Ring finger domain^66-108^E:2e-11`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^66-107^E:9.9e-09`PF17123.2^zf-RING_11^RING-like zinc finger^66-94^E:7.1e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^67-107^E:0.00019`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^67-105^E:0.0012",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT3G63530`KO:K19045","GO:0016874^molecular_function^ligase activity`GO:0031624^molecular_function^ubiquitin conjugating enzyme binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0008270^molecular_function^zinc ion binding`GO:0048437^biological_process^floral organ development`GO:0046621^biological_process^negative regulation of organ growth`GO:0051865^biological_process^protein autoubiquitination`GO:0016567^biological_process^protein ubiquitination","GO:0008270^molecular_function^zinc ion binding`GO:0005515^molecular_function^protein binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN47283_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.15412776408667,"0.00377061380387598","0.00934562833985151","TRINITY_DN47283_c0_g2_i2","C83B1_ARATH^C83B1_ARATH^Q:163-1533,H:43-498^47.17%ID^E:6e-140^RecName: Full=Cytochrome P450 83B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47283_c0_g2_i2.p1","1-1542[+]","C83B1_ARATH^C83B1_ARATH^Q:14-511,H:4-498^46.51%ID^E:2e-157^RecName: Full=Cytochrome P450 83B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^42-503^E:3.8e-98",".",".","COG2124^Cytochrome p450","KEGG:ath:AT4G31500`KO:K11818","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005739^cellular_component^mitochondrion`GO:0005886^cellular_component^plasma membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0016709^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen`GO:0048830^biological_process^adventitious root development`GO:0052544^biological_process^defense response by callose deposition in cell wall`GO:0042742^biological_process^defense response to bacterium`GO:0009759^biological_process^indole glucosinolate biosynthetic process`GO:0009684^biological_process^indoleacetic acid biosynthetic process`GO:0009682^biological_process^induced systemic resistance`GO:0040008^biological_process^regulation of growth`GO:0010114^biological_process^response to red light`GO:0009641^biological_process^shade avoidance`GO:0000162^biological_process^tryptophan biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46536_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.1538278056609,"0.0063154560589778","0.0147672616224423","TRINITY_DN46536_c1_g3_i1","EFTU2_SOYBN^EFTU2_SOYBN^Q:199-1515,H:42-479^85.26%ID^E:0^RecName: Full=Elongation factor Tu, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN46536_c1_g3_i1.p1","94-1518[+]","EFTU2_SOYBN^EFTU2_SOYBN^Q:3-474,H:2-479^80.67%ID^E:0^RecName: Full=Elongation factor Tu, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF00009.24^GTP_EFTU^Elongation factor Tu GTP binding domain^75-276^E:8.4e-55`PF03144.22^GTP_EFTU_D2^Elongation factor Tu domain 2^300-368^E:1.9e-18`PF03143.14^GTP_EFTU_D3^Elongation factor Tu C-terminal domain^373-472^E:1.4e-33",".",".","COG0050^This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity)",".","GO:0009507^cellular_component^chloroplast`GO:0005739^cellular_component^mitochondrion`GO:0005525^molecular_function^GTP binding`GO:0003924^molecular_function^GTPase activity`GO:0003746^molecular_function^translation elongation factor activity`GO:0070125^biological_process^mitochondrial translational elongation","GO:0005525^molecular_function^GTP binding",".","."]
["TRINITY_DN43904_c3_g2","leaves S. abrotanoides","leaves S. yangii",1.1471590882311,"0.00313585664885984","0.00793401611344111","TRINITY_DN43904_c3_g2_i6","R18A1_ARATH^R18A1_ARATH^Q:59-565,H:7-175^56.8%ID^E:8e-69^RecName: Full=60S ribosomal protein L18a-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43904_c3_g2_i6.p1","50-577[+]","R18A1_ARATH^R18A1_ARATH^Q:4-172,H:7-175^56.8%ID^E:5e-69^RecName: Full=60S ribosomal protein L18a-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01775.14^Ribosomal_L18A^Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A^4-124^E:3.8e-49",".",".","COG2157^ribosomal protein","KEGG:ath:AT1G29965`KO:K02882","GO:0005829^cellular_component^cytosol`GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0009506^cellular_component^plasmodesma`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN42360_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.14240244366561,"0.00256222954896339","0.00660783918028295","TRINITY_DN42360_c0_g1_i1","PER11_ARATH^PER11_ARATH^Q:1272-301,H:14-336^67.28%ID^E:1e-158^RecName: Full=Peroxidase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42360_c0_g1_i1.p1","298-1317[-]","PER11_ARATH^PER11_ARATH^Q:16-339,H:14-336^67.28%ID^E:3e-166^RecName: Full=Peroxidase 11;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00141.20^peroxidase^Peroxidase^49-301^E:7.3e-69","sigP:1^28^0.788^YES",".","ENOG410YA9R^peroxidase","KEGG:ath:AT1G68850`KO:K00430","GO:0005576^cellular_component^extracellular region`GO:0020037^molecular_function^heme binding`GO:0046872^molecular_function^metal ion binding`GO:0004601^molecular_function^peroxidase activity`GO:0042744^biological_process^hydrogen peroxide catabolic process`GO:0006979^biological_process^response to oxidative stress`GO:0048511^biological_process^rhythmic process","GO:0004601^molecular_function^peroxidase activity`GO:0020037^molecular_function^heme binding`GO:0006979^biological_process^response to oxidative stress`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN39049_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.14030966029014,"0.00473402171451902","0.0114333202343577","TRINITY_DN39049_c0_g1_i3","ILL4_ARATH^ILL4_ARATH^Q:216-1376,H:29-430^53.23%ID^E:5e-141^RecName: Full=IAA-amino acid hydrolase ILR1-like 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39049_c0_g1_i3.p1","96-1391[+]","ILL4_ARATH^ILL4_ARATH^Q:41-427,H:29-430^53.23%ID^E:3e-142^RecName: Full=IAA-amino acid hydrolase ILR1-like 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01546.25^Peptidase_M20^Peptidase family M20/M25/M40^117-413^E:4.1e-32",".",".","COG1473^amidohydrolase","KEGG:ath:AT1G51760`KO:K14664","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005788^cellular_component^endoplasmic reticulum lumen`GO:0005886^cellular_component^plasma membrane`GO:0010179^molecular_function^IAA-Ala conjugate hydrolase activity`GO:0009611^biological_process^response to wounding","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN39720_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.13764215975389,"0.000165629852450543","0.000538996324504277","TRINITY_DN39720_c0_g1_i4","DNJ36_ARATH^DNJ36_ARATH^Q:754-476,H:347-439^77.42%ID^E:2e-40^RecName: Full=DnaJ protein P58IPK homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39720_c0_g1_i4.p1","365-745[-]","DNJ36_ARATH^DNJ36_ARATH^Q:1-112,H:350-463^73.91%ID^E:4e-43^RecName: Full=DnaJ protein P58IPK homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00226.28^DnaJ^DnaJ domain^21-84^E:3.7e-27",".",".","COG0484^ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)","KEGG:ath:AT5G03160`KO:K09523","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005788^cellular_component^endoplasmic reticulum lumen`GO:0005886^cellular_component^plasma membrane`GO:0044794^biological_process^positive regulation by host of viral process`GO:0016032^biological_process^viral process",".",".","."]
["TRINITY_DN14077_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.13559194558561,"0.000809681981510911","0.00231365032354574","TRINITY_DN14077_c0_g1_i1","YLS9_ARATH^YLS9_ARATH^Q:324-797,H:44-202^28.75%ID^E:2e-13^RecName: Full=Protein YLS9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN14077_c0_g1_i1.p1","99-869[+]","YLS9_ARATH^YLS9_ARATH^Q:41-233,H:13-202^28.72%ID^E:5e-16^RecName: Full=Protein YLS9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YGQV^harpin-induced protein 1 domain containing protein, expressed","KEGG:ath:AT2G35980","GO:0046658^cellular_component^anchored component of plasma membrane`GO:0009507^cellular_component^chloroplast`GO:0009506^cellular_component^plasmodesma`GO:0004871^molecular_function^signal transducer activity`GO:0051607^biological_process^defense response to virus`GO:0010150^biological_process^leaf senescence`GO:0051707^biological_process^response to other organism`GO:0007165^biological_process^signal transduction",".",".","."]
["TRINITY_DN28411_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.13328307856177,"0.000167544812695138","0.000544820900780159","TRINITY_DN28411_c0_g1_i3","NC100_ARATH^NC100_ARATH^Q:1414-977,H:1-146^81.51%ID^E:9e-86^RecName: Full=NAC domain-containing protein 100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`NC100_ARATH^NC100_ARATH^Q:924-310,H:139-336^31.63%ID^E:9e-86^RecName: Full=NAC domain-containing protein 100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN28411_c0_g1_i3.p2","947-1414[-]","NC100_ARATH^NC100_ARATH^Q:1-153,H:1-153^78.43%ID^E:1e-84^RecName: Full=NAC domain-containing protein 100;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02365.12^NAM^No apical meristem (NAM) protein^17-141^E:2.8e-28",".",".","ENOG410Y9QZ^NAC domain-containing protein","KEGG:ath:AT5G61430","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN32756_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.1288348251028,"0.000116159797572907","0.000389177324565699","TRINITY_DN32756_c0_g1_i3","VTSS1_SOLTU^VTSS1_SOLTU^Q:149-1756,H:15-554^60.56%ID^E:0^RecName: Full=Vetispiradiene synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN32756_c0_g1_i3.p1","107-1762[+]","VTSS1_SOLTU^VTSS1_SOLTU^Q:15-550,H:15-554^61.74%ID^E:0^RecName: Full=Vetispiradiene synthase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01397.18^Terpene_synth^Terpene synthase, N-terminal domain^27-199^E:1e-54`PF03936.13^Terpene_synth_C^Terpene synthase family, metal binding domain^230-494^E:8.7e-104",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0000287^molecular_function^magnesium ion binding`GO:0034003^molecular_function^vetispiradiene synthase activity`GO:0016114^biological_process^terpenoid biosynthetic process","GO:0010333^molecular_function^terpene synthase activity`GO:0016829^molecular_function^lyase activity`GO:0008152^biological_process^metabolic process`GO:0000287^molecular_function^magnesium ion binding",".","."]
["TRINITY_DN44523_c5_g5","leaves S. abrotanoides","leaves S. yangii",1.12331557940541,"0.00391382622532512","0.00966866941572828","TRINITY_DN44523_c5_g5_i2","CX32_ARATH^CX32_ARATH^Q:1430-375,H:63-407^52.93%ID^E:2e-135^RecName: Full=Probable serine/threonine-protein kinase Cx32, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44523_c5_g5_i2.p1","303-1595[-]","CX32_ARATH^CX32_ARATH^Q:1-385,H:1-368^53.12%ID^E:6e-141^RecName: Full=Probable serine/threonine-protein kinase Cx32, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^81-380^E:1.5e-42`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^83-382^E:1.1e-43",".",".","COG0515^Serine Threonine protein kinase",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43599_c3_g4","leaves S. abrotanoides","leaves S. yangii",1.11968817567582,{"v":3137034262.81713,"d":"3.14E+09"},"0.000115264569757982","TRINITY_DN43599_c3_g4_i2","GDU3_ARATH^GDU3_ARATH^Q:632-465,H:55-113^57.63%ID^E:5e-11^RecName: Full=Protein GLUTAMINE DUMPER 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43599_c3_g4_i2.p1","282-914[-]","GDU3_ARATH^GDU3_ARATH^Q:64-150,H:24-113^70%ID^E:4e-35^RecName: Full=Protein GLUTAMINE DUMPER 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YP3Q^glutamine dumper","KEGG:ath:AT5G57685","GO:0005623^cellular_component^cell`GO:0016021^cellular_component^integral component of membrane`GO:0006865^biological_process^amino acid transport`GO:0019048^biological_process^modulation by virus of host morphology or physiology`GO:0080143^biological_process^regulation of amino acid export`GO:0009615^biological_process^response to virus`GO:0032940^biological_process^secretion by cell",".",".","."]
["TRINITY_DN44821_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.11529608929744,"0.0208316321097724","0.0422886404585291","TRINITY_DN44821_c0_g1_i3","ALE2_ARATH^ALE2_ARATH^Q:2177-495,H:101-638^54.32%ID^E:5e-172^RecName: Full=Receptor-like serine/threonine-protein kinase ALE2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44821_c0_g1_i3.p1","252-2741[-]","ALE2_ARATH^ALE2_ARATH^Q:129-823,H:24-727^47.6%ID^E:0^RecName: Full=Receptor-like serine/threonine-protein kinase ALE2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^453-718^E:6.8e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^454-724^E:6.7e-48","sigP:1^20^0.534^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT2G20300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0016301^molecular_function^kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0030154^biological_process^cell differentiation`GO:0042335^biological_process^cuticle development`GO:0048645^biological_process^organ formation`GO:0046777^biological_process^protein autophosphorylation`GO:0010068^biological_process^protoderm histogenesis","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47604_c2_g5","leaves S. abrotanoides","leaves S. yangii",1.11228304559597,"0.00175410002547891","0.00467764393522409","TRINITY_DN47604_c2_g5_i1","Y4374_ARATH^Y4374_ARATH^Q:718-1269,H:433-608^38.02%ID^E:5e-39^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y4374_ARATH^Y4374_ARATH^Q:365-619,H:334-424^37.63%ID^E:5e-39^RecName: Full=Probable inactive receptor kinase At4g23740;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47604_c2_g5_i1.p2","880-1275[+]","Y5830_ARATH^Y5830_ARATH^Q:11-130,H:522-629^32.81%ID^E:3e-09^RecName: Full=Probable inactive receptor kinase At5g58300;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG4111F0S^inactive receptor kinase","KEGG:ath:AT5G58300","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity",".",".","."]
["TRINITY_DN43602_c1_g5","leaves S. abrotanoides","leaves S. yangii",1.1063378341859,"0.0251182683030324","0.0497611840624353","TRINITY_DN43602_c1_g5_i1","GDL31_ARATH^GDL31_ARATH^Q:1069-236,H:8-283^70.86%ID^E:1e-139^RecName: Full=GDSL esterase/lipase At1g74460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43602_c1_g5_i1.p1","227-1102[-]","GDL31_ARATH^GDL31_ARATH^Q:9-289,H:3-283^70.46%ID^E:2e-144^RecName: Full=GDSL esterase/lipase At1g74460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^31-281^E:8.2e-13","sigP:1^21^0.785^YES",".","COG3240^GDSL esterase lipase","KEGG:ath:AT1G74460","GO:0005576^cellular_component^extracellular region`GO:0016788^molecular_function^hydrolase activity, acting on ester bonds`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN46453_c8_g2","leaves S. abrotanoides","leaves S. yangii",1.10617751004507,"0.00651823892177587","0.0151876013143657","TRINITY_DN46453_c8_g2_i2","RL35_WHEAT^RL35_WHEAT^Q:650-276,H:1-124^69.6%ID^E:7e-53^RecName: Full=60S ribosomal protein L35;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".","TRINITY_DN46453_c8_g2_i2.p1","270-650[-]","RL35_WHEAT^RL35_WHEAT^Q:1-125,H:1-124^69.6%ID^E:2e-54^RecName: Full=60S ribosomal protein L35;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum","PF00831.20^Ribosomal_L29^Ribosomal L29 protein^11-64^E:2.3e-17",".",".",".",".","GO:0005840^cellular_component^ribosome`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005622^cellular_component^intracellular`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN46335_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.10272120495069,"0.000889692770081505","0.00252241801767639","TRINITY_DN46335_c1_g1_i2","PK01_HELAN^PK01_HELAN^Q:346-918,H:34-222^67.88%ID^E:6e-86^RecName: Full=Putative serine/threonine-protein kinase {ECO:0000250|UniProtKB:Q9FE20, ECO:0000303|Ref.2};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus",".","TRINITY_DN46335_c1_g1_i2.p1","208-894[+]","PK01_HELAN^PK01_HELAN^Q:47-228,H:34-217^69.57%ID^E:8e-88^RecName: Full=Putative serine/threonine-protein kinase {ECO:0000250|UniProtKB:Q9FE20, ECO:0000303|Ref.2};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^62-214^E:1.5e-30`PF00069.22^Pkinase^Protein kinase domain^64-219^E:5.3e-34",".",".",".",".","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN47189_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.10053357332853,"0.000250312845613916","0.000788643018434006","TRINITY_DN47189_c1_g1_i1","MYB44_ARATH^MYB44_ARATH^Q:806-420,H:3-132^68.46%ID^E:8e-54^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47189_c1_g1_i1.p1","225-1040[-]","MYB44_ARATH^MYB44_ARATH^Q:79-207,H:3-132^68.46%ID^E:4e-56^RecName: Full=Transcription factor MYB44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^82-127^E:5.5e-18`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^85-143^E:2.8e-16`PF00249.28^Myb_DNA-binding^Myb-like DNA-binding domain^136-178^E:6.8e-14`PF13921.3^Myb_DNA-bind_6^Myb-like DNA-binding domain^137-184^E:1.5e-08",".",".","COG5147^Myblike DNAbinding domain containing protein","KEGG:ath:AT5G67300`KO:K09422","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0042742^biological_process^defense response to bacterium`GO:0050832^biological_process^defense response to fungus`GO:2000022^biological_process^regulation of jasmonic acid mediated signaling pathway`GO:2000031^biological_process^regulation of salicylic acid mediated signaling pathway`GO:0009737^biological_process^response to abscisic acid`GO:0009733^biological_process^response to auxin`GO:0046686^biological_process^response to cadmium ion`GO:0010200^biological_process^response to chitin`GO:0009723^biological_process^response to ethylene`GO:0009739^biological_process^response to gibberellin`GO:0009753^biological_process^response to jasmonic acid`GO:0009751^biological_process^response to salicylic acid`GO:0009651^biological_process^response to salt stress`GO:0009414^biological_process^response to water deprivation`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN45371_c1_g6","leaves S. abrotanoides","leaves S. yangii",1.08892344595179,"0.021770287578214","0.0439197852059697","TRINITY_DN45371_c1_g6_i1","H32_WHEAT^H32_WHEAT^Q:595-188,H:1-136^99.26%ID^E:4e-77^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum",".","TRINITY_DN45371_c1_g6_i1.p1","185-595[-]","H32_TOBAC^H32_TOBAC^Q:1-136,H:1-136^100%ID^E:3e-93^RecName: Full=Histone H3.2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF00125.21^Histone^Core histone H2A/H2B/H3/H4^1-132^E:8.3e-55",".",".",".",".","GO:0000786^cellular_component^nucleosome`GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding","GO:0003677^molecular_function^DNA binding",".","."]
["TRINITY_DN42950_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.0695460590877,"0.000600974052604901","0.00176213426089673","TRINITY_DN42950_c0_g1_i2","SCP18_ARATH^SCP18_ARATH^Q:458-3,H:196-345^38.06%ID^E:2e-25^RecName: Full=Serine carboxypeptidase-like 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42950_c0_g1_i2.p1","3-464[-]","SCP18_ARATH^SCP18_ARATH^Q:3-154,H:196-345^41.4%ID^E:6e-26^RecName: Full=Serine carboxypeptidase-like 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00450.19^Peptidase_S10^Serine carboxypeptidase^2-152^E:5.9e-16",".",".","COG2939^carboxy-peptidase","KEGG:ath:AT1G33540`KO:K16296","GO:0005576^cellular_component^extracellular region`GO:0004185^molecular_function^serine-type carboxypeptidase activity","GO:0004185^molecular_function^serine-type carboxypeptidase activity`GO:0006508^biological_process^proteolysis",".","."]
["TRINITY_DN46673_c4_g7","leaves S. abrotanoides","leaves S. yangii",1.06013178000962,{"v":3461053055.35443,"d":"3.46E+09"},"0.000125979554040935","TRINITY_DN46673_c4_g7_i1","CX32_ARATH^CX32_ARATH^Q:1552-476,H:28-382^54.72%ID^E:5e-128^RecName: Full=Probable serine/threonine-protein kinase Cx32, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46673_c4_g7_i1.p1","356-1582[-]","CX32_ARATH^CX32_ARATH^Q:11-393,H:28-404^53.39%ID^E:4e-142^RecName: Full=Probable serine/threonine-protein kinase Cx32, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^73-348^E:2.8e-42`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^74-350^E:1.4e-46",".",".","COG0515^Serine Threonine protein kinase",".","GO:0009507^cellular_component^chloroplast`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN43329_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.05218895274786,"0.00225803266320892","0.0058888972581999","TRINITY_DN43329_c0_g2_i4","FIT_ARATH^FIT_ARATH^Q:675-82,H:108-313^53.85%ID^E:4e-46^RecName: Full=Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43329_c0_g2_i4.p1","79-969[-]","FIT_ARATH^FIT_ARATH^Q:99-296,H:108-313^53.85%ID^E:1e-60^RecName: Full=Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^116-164^E:1.5e-09",".",".","ENOG410YQ9Q^Transcription factor","KEGG:ath:AT2G28160","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0071369^biological_process^cellular response to ethylene stimulus`GO:0071281^biological_process^cellular response to iron ion`GO:0071732^biological_process^cellular response to nitric oxide`GO:0034756^biological_process^regulation of iron ion transport`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0010039^biological_process^response to iron ion`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN27307_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.04830023597135,"0.00417942731786927","0.0102445643481146","TRINITY_DN27307_c0_g1_i1","KIC_ARATH^KIC_ARATH^Q:756-385,H:3-126^48.39%ID^E:2e-27^RecName: Full=Calcium-binding protein KIC;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN27307_c0_g1_i1.p1","373-909[-]","PBP1_ARATH^PBP1_ARATH^Q:70-175,H:18-124^64.49%ID^E:3e-42^RecName: Full=Calcium-binding protein PBP1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13833.3^EF-hand_8^EF-hand domain pair^102-154^E:1.4e-19",".",".","COG5126^Calcium-binding protein","KEGG:ath:AT5G54490","GO:0005509^molecular_function^calcium ion binding`GO:0009733^biological_process^response to auxin","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN42346_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.04637106990054,"0.0150280770602869","0.0317382492638881","TRINITY_DN42346_c0_g1_i10","VIP4_ARATH^VIP4_ARATH^Q:1346-624,H:120-372^38.58%ID^E:2e-31^RecName: Full=Protein LEO1 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42346_c0_g1_i10.p1","453-1643[-]","VIP4_ARATH^VIP4_ARATH^Q:100-358,H:120-390^38.24%ID^E:1e-36^RecName: Full=Protein LEO1 homolog {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04004.10^Leo1^Leo1-like protein^235-375^E:1e-22",".",".","ENOG410XRI0^positive regulation of transcription elongation from RNA polymerase II promoter",".","GO:0016593^cellular_component^Cdc73/Paf1 complex`GO:0005829^cellular_component^cytosol`GO:0005634^cellular_component^nucleus`GO:1990269^molecular_function^RNA polymerase II C-terminal domain phosphoserine binding`GO:0009908^biological_process^flower development`GO:0016570^biological_process^histone modification`GO:0009910^biological_process^negative regulation of flower development`GO:0032968^biological_process^positive regulation of transcription elongation from RNA polymerase II promoter`GO:0006368^biological_process^transcription elongation from RNA polymerase II promoter`GO:0010048^biological_process^vernalization response","GO:0006368^biological_process^transcription elongation from RNA polymerase II promoter`GO:0016570^biological_process^histone modification`GO:0016593^cellular_component^Cdc73/Paf1 complex",".","."]
["TRINITY_DN45880_c3_g7","leaves S. abrotanoides","leaves S. yangii",1.04628183708505,{"v":4547081522.45484,"d":"4.55E+09"},"0.000162681815757364","TRINITY_DN45880_c3_g7_i1","FLA8_ARATH^FLA8_ARATH^Q:235-1158,H:27-334^67.86%ID^E:3e-140^RecName: Full=Fasciclin-like arabinogalactan protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45880_c3_g7_i1.p1","169-1452[+]","FLA8_ARATH^FLA8_ARATH^Q:5-417,H:10-410^59.32%ID^E:3e-148^RecName: Full=Fasciclin-like arabinogalactan protein 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02469.19^Fasciclin^Fasciclin domain^194-324^E:9.5e-18","sigP:1^21^0.885^YES",".","ENOG410YIMZ^Fasciclin-like arabinogalactan protein","KEGG:ath:AT2G45470","GO:0031225^cellular_component^anchored component of membrane`GO:0046658^cellular_component^anchored component of plasma membrane`GO:0048046^cellular_component^apoplast`GO:0009505^cellular_component^plant-type cell wall`GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN44263_c2_g2","leaves S. abrotanoides","leaves S. yangii",1.04383847751301,"0.00504649398298598","0.0121082490342189","TRINITY_DN44263_c2_g2_i1","FBL23_ARATH^FBL23_ARATH^Q:289-1038,H:179-395^22.22%ID^E:3e-08^RecName: Full=Putative F-box/LRR-repeat protein 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44263_c2_g2_i1.p1","277-1110[+]","FBL23_ARATH^FBL23_ARATH^Q:5-254,H:179-395^22.22%ID^E:5e-09^RecName: Full=Putative F-box/LRR-repeat protein 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".",".",".",".",".",".","."]
["TRINITY_DN47500_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.04106240307581,"0.0150987984962745","0.0318659725169993","TRINITY_DN47500_c3_g1_i3","ACCH3_SOLLC^ACCH3_SOLLC^Q:45-542,H:6-172^56.55%ID^E:8e-62^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN47500_c3_g1_i3.p1","3-584[+]","ACCH3_SOLLC^ACCH3_SOLLC^Q:15-180,H:6-172^56.55%ID^E:3e-62^RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF14226.3^DIOX_N^non-haem dioxygenase in morphine synthesis N-terminal^68-173^E:1.7e-19",".",".","COG3491^2OGFe(II) oxygenase","KEGG:sly:101268031","GO:0031418^molecular_function^L-ascorbic acid binding`GO:0046872^molecular_function^metal ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0009693^biological_process^ethylene biosynthetic process`GO:0009835^biological_process^fruit ripening",".",".","."]
["TRINITY_DN47036_c2_g2","leaves S. abrotanoides","leaves S. yangii",1.03832727150016,"0.000675963088708413","0.00196193285704305","TRINITY_DN47036_c2_g2_i1","R1B13_SOLDE^R1B13_SOLDE^Q:487-900,H:531-674^40.69%ID^E:3e-26^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47036_c2_g2_i1.p1","73-900[+]","R1B13_SOLDE^R1B13_SOLDE^Q:85-276,H:479-674^35.82%ID^E:4e-27^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^141-276^E:6.1e-31",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45540_c3_g3","leaves S. abrotanoides","leaves S. yangii",1.03692719229712,"0.0243459801167973","0.0484162362830528","TRINITY_DN45540_c3_g3_i4","Y1634_ARATH^Y1634_ARATH^Q:2103-433,H:26-581^65.48%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g63430;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y1634_ARATH^Y1634_ARATH^Q:358-155,H:578-651^44.59%ID^E:3e-09^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g63430;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45540_c3_g3_i4.p1","301-2181[-]","Y1634_ARATH^Y1634_ARATH^Q:7-583,H:6-581^64.6%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g63430;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^26-66^E:4.1e-08`PF13855.3^LRR_8^Leucine rich repeat^94-154^E:4.2e-07`PF00560.30^LRR_1^Leucine Rich Repeat^119-141^E:0.24`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^366-571^E:6.1e-18`PF00069.22^Pkinase^Protein kinase domain^367-573^E:1.7e-14","sigP:1^23^0.899^YES",".","ENOG410YEY6^LRR receptor-like serine threonine-protein kinase",".","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46723_c1_g3","leaves S. abrotanoides","leaves S. yangii",1.03374200491877,"0.00327292718003376","0.00823964810013356","TRINITY_DN46723_c1_g3_i1","C71A6_NEPRA^C71A6_NEPRA^Q:1800-325,H:2-508^70.59%ID^E:0^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta",".","TRINITY_DN46723_c1_g3_i1.p1","319-1872[-]","C71A6_NEPRA^C71A6_NEPRA^Q:25-516,H:2-508^70.78%ID^E:0^RecName: Full=Cytochrome P450 71A6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Nepeta","PF00067.19^p450^Cytochrome P450^54-505^E:2.3e-108",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43393_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.03197156741813,"0.00422842668028967","0.0103495686304662","TRINITY_DN43393_c1_g1_i2","RL23_ARATH^RL23_ARATH^Q:55-414,H:3-122^80%ID^E:1e-65^RecName: Full=60S ribosomal protein L23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43393_c1_g1_i2.p2","46-414[+]","RL23_ARATH^RL23_ARATH^Q:4-123,H:3-122^80%ID^E:5e-66^RecName: Full=60S ribosomal protein L23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00238.16^Ribosomal_L14^Ribosomal protein L14p/L23e^23-122^E:5.5e-29",".",".","COG0093^Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (By similarity)","KEGG:ath:AT1G04480`KEGG:ath:AT2G33370`KO:K02894","GO:0022625^cellular_component^cytosolic large ribosomal subunit`GO:0005730^cellular_component^nucleolus`GO:0070180^molecular_function^large ribosomal subunit rRNA binding`GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation","GO:0003735^molecular_function^structural constituent of ribosome`GO:0006412^biological_process^translation`GO:0005840^cellular_component^ribosome",".","."]
["TRINITY_DN45014_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.02875344781889,"0.00892567062390558","0.020064789610254","TRINITY_DN45014_c0_g2_i1","ZAT9_ARATH^ZAT9_ARATH^Q:1331-399,H:4-286^40.25%ID^E:2e-47^RecName: Full=Zinc finger protein ZAT9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45014_c0_g2_i1.p1","348-1343[-]","ZAT9_ARATH^ZAT9_ARATH^Q:5-315,H:4-286^40.56%ID^E:1e-56^RecName: Full=Zinc finger protein ZAT9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13912.3^zf-C2H2_6^C2H2-type zinc finger^5-28^E:4.5e-05`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^203-227^E:2.4e-11`PF13912.3^zf-C2H2_6^C2H2-type zinc finger^250-272^E:6.2e-09",".",".","COG5048^Zinc finger protein","KEGG:ath:AT3G60580","GO:0005634^cellular_component^nucleus`GO:0046872^molecular_function^metal ion binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0044212^molecular_function^transcription regulatory region DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN44523_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.0266301049822,"0.000313171348625012","0.000969157610142271","TRINITY_DN44523_c3_g1_i4","LOB_ARATH^LOB_ARATH^Q:719-345,H:1-126^84.92%ID^E:1e-66^RecName: Full=Protein LATERAL ORGAN BOUNDARIES;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44523_c3_g1_i4.p1","240-719[-]","LOB_ARATH^LOB_ARATH^Q:1-128,H:1-129^82.95%ID^E:2e-69^RecName: Full=Protein LATERAL ORGAN BOUNDARIES;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03195.11^DUF260^Protein of unknown function DUF260^10-107^E:8.5e-44",".",".","ENOG4111S1U^lob domain-containing protein","KEGG:ath:AT5G63090","GO:0010199^biological_process^organ boundary specification between lateral organs and the meristem",".",".","."]
["TRINITY_DN44019_c0_g1","leaves S. abrotanoides","leaves S. yangii",1.01974162506067,"0.000530244046770104","0.00157210428572607","TRINITY_DN44019_c0_g1_i1","ARG7_VIGRR^ARG7_VIGRR^Q:841-650,H:25-89^52.31%ID^E:3e-12^RecName: Full=Indole-3-acetic acid-induced protein ARG7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna",".","TRINITY_DN44019_c0_g1_i1.p2","506-994[-]","ARG7_VIGRR^ARG7_VIGRR^Q:52-115,H:25-89^52.31%ID^E:2e-13^RecName: Full=Indole-3-acetic acid-induced protein ARG7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna","PF02519.11^Auxin_inducible^Auxin responsive protein^16-115^E:6e-25",".",".",".",".","GO:0009733^biological_process^response to auxin","GO:0009733^biological_process^response to auxin",".","."]
["TRINITY_DN44454_c4_g1","leaves S. abrotanoides","leaves S. yangii",1.01825991573742,"0.000338697425118678","0.00104281642173842","TRINITY_DN44454_c4_g1_i1","ASO_TOBAC^ASO_TOBAC^Q:1396-2,H:24-485^69.46%ID^E:0^RecName: Full=L-ascorbate oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana",".","TRINITY_DN44454_c4_g1_i1.p1","2-1453[-]","ASO_TOBAC^ASO_TOBAC^Q:20-484,H:24-485^69.46%ID^E:0^RecName: Full=L-ascorbate oxidase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana","PF07732.12^Cu-oxidase_3^Multicopper oxidase^33-146^E:6.6e-42`PF00394.19^Cu-oxidase^Multicopper oxidase^162-324^E:6.8e-49`PF07731.11^Cu-oxidase_2^Multicopper oxidase^430-484^E:6.7e-07","sigP:1^23^0.583^YES",".",".",".","GO:0005576^cellular_component^extracellular region`GO:0005507^molecular_function^copper ion binding`GO:0008447^molecular_function^L-ascorbate oxidase activity","GO:0005507^molecular_function^copper ion binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN43881_c4_g3","leaves S. abrotanoides","leaves S. yangii",1.01292417131926,"0.0154011998632857","0.0324256164980838","TRINITY_DN43881_c4_g3_i3","WRI1_ARATH^WRI1_ARATH^Q:1352-810,H:55-235^82.87%ID^E:8e-85^RecName: Full=Ethylene-responsive transcription factor WRI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43881_c4_g3_i3.p1","339-1529[-]","WRI1_ARATH^WRI1_ARATH^Q:45-240,H:33-235^79.31%ID^E:8e-102^RecName: Full=Ethylene-responsive transcription factor WRI1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00847.17^AP2^AP2 domain^69-128^E:9.6e-12`PF00847.17^AP2^AP2 domain^171-222^E:1.3e-11",".",".","ENOG410Y9IH^Transcription factor","KEGG:ath:AT3G54320","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0008610^biological_process^lipid biosynthetic process`GO:0006629^biological_process^lipid metabolic process`GO:0007275^biological_process^multicellular organism development`GO:1901959^biological_process^positive regulation of cutin biosynthetic process`GO:0006109^biological_process^regulation of carbohydrate metabolic process`GO:0006110^biological_process^regulation of glycolytic process`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009744^biological_process^response to sucrose`GO:0006351^biological_process^transcription, DNA-templated`GO:0019432^biological_process^triglyceride biosynthetic process","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN42970_c2_g2","leaves S. abrotanoides","leaves S. yangii",1.00884206440676,"0.000712542064373667","0.00205767783947907","TRINITY_DN42970_c2_g2_i3","WRK22_ARATH^WRK22_ARATH^Q:1140-676,H:83-209^59.62%ID^E:3e-44^RecName: Full=WRKY transcription factor 22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42970_c2_g2_i3.p1","907-1464[-]","WRK22_ARATH^WRK22_ARATH^Q:1-173,H:1-148^43.18%ID^E:6e-29^RecName: Full=WRKY transcription factor 22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^154-174^E:2.7e-06",".",".","ENOG410YMDW^WRKY transcription factor","KEGG:ath:AT4G01250`KO:K13425","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006952^biological_process^defense response`GO:0010150^biological_process^leaf senescence`GO:0010200^biological_process^response to chitin`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN47758_c3_g1","leaves S. abrotanoides","leaves S. yangii",1.00513218100682,"0.00287999229850579","0.00734554905794366","TRINITY_DN47758_c3_g1_i12","GSO1_ARATH^GSO1_ARATH^Q:1262-6,H:290-726^38.79%ID^E:7e-81^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1872-1261,H:26-277^31.89%ID^E:7e-81^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1370-12,H:60-533^34.31%ID^E:1e-51^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1262-120,H:363-809^32.59%ID^E:6e-49^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1163-6,H:83-487^34.06%ID^E:6e-41^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1256-267,H:485-832^36.62%ID^E:8e-38^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:875-3,H:83-368^35.15%ID^E:7e-29^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1746-1153,H:239-433^37.37%ID^E:4e-24^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1259-774,H:651-813^41.21%ID^E:2e-21^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1743-1171,H:264-451^34.55%ID^E:7e-20^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:671-6,H:55-270^38.12%ID^E:5e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1746-1243,H:647-836^32.46%ID^E:7e-17^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1788-1255,H:330-496^37.22%ID^E:7e-15^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1746-1231,H:552-719^36.36%ID^E:1e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:1710-1255,H:492-663^34.48%ID^E:4e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47758_c3_g1_i12.p1","3-983[-]","Y3475_ARATH^Y3475_ARATH^Q:1-326,H:187-512^41.46%ID^E:2e-55^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:1-327,H:91-441^33.7%ID^E:1e-32^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:37-320,H:78-361^38.01%ID^E:6e-28^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:2-240,H:338-593^35.23%ID^E:7e-23^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:125-326,H:43-241^32.67%ID^E:6e-16^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:185-327,H:54-194^37.76%ID^E:9e-12^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^49-63^E:1.1`PF00560.30^LRR_1^Leucine Rich Repeat^75-94^E:0.91`PF13516.3^LRR_6^Leucine Rich repeat^147-161^E:1.6`PF00560.30^LRR_1^Leucine Rich Repeat^150-173^E:0.53`PF13855.3^LRR_8^Leucine rich repeat^176-235^E:1.3e-10`PF13516.3^LRR_6^Leucine Rich repeat^198-213^E:1.1`PF00560.30^LRR_1^Leucine Rich Repeat^200-218^E:0.12",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44935_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.00503243651107,"0.0228174171905009","0.0457693636025763","TRINITY_DN44935_c0_g2_i4","R1B12_SOLDE^R1B12_SOLDE^Q:594-959,H:1130-1266^35.77%ID^E:4e-11^RecName: Full=Putative late blight resistance protein homolog R1B-12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN44935_c0_g2_i4.p1","597-1019[+]","R1B12_SOLDE^R1B12_SOLDE^Q:8-127,H:1142-1272^37.4%ID^E:1e-13^RecName: Full=Putative late blight resistance protein homolog R1B-12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN46699_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.0046126063079,"0.000251563160285927","0.000792226201876708","TRINITY_DN46699_c1_g1_i3","Y1887_ARATH^Y1887_ARATH^Q:9-563,H:54-234^47.12%ID^E:9e-31^RecName: Full=Putative receptor-like protein kinase At1g80870;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46699_c1_g1_i3.p1","3-374[+]","Y1887_ARATH^Y1887_ARATH^Q:3-122,H:54-167^55%ID^E:1e-31^RecName: Full=Putative receptor-like protein kinase At1g80870;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^43-120^E:2.4e-09`PF00069.22^Pkinase^Protein kinase domain^43-119^E:9.5e-09",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT1G80870","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN44161_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.0027404099017,"0.0150226428728319","0.0317317221562776","TRINITY_DN44161_c0_g2_i1","LRK71_ARATH^LRK71_ARATH^Q:2386-464,H:21-667^62.35%ID^E:0^RecName: Full=L-type lectin-domain containing receptor kinase VII.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44161_c0_g2_i1.p1","401-2449[-]","LRK71_ARATH^LRK71_ARATH^Q:20-662,H:19-667^62.46%ID^E:0^RecName: Full=L-type lectin-domain containing receptor kinase VII.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00139.16^Lectin_legB^Legume lectin domain^22-259^E:1e-66`PF00069.22^Pkinase^Protein kinase domain^348-610^E:1e-46`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^350-611^E:7.5e-45","sigP:1^21^0.854^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT4G04960","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45537_c1_g4","leaves S. abrotanoides","leaves S. yangii",1.00187912941059,"0.00104541181285962","0.00292130349245449","TRINITY_DN45537_c1_g4_i1","GP1_SOLLC^GP1_SOLLC^Q:2143-356,H:34-630^68.17%ID^E:0^RecName: Full=Polygalacturonase-1 non-catalytic subunit beta;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon",".","TRINITY_DN45537_c1_g4_i1.p1","353-2311[-]","GP1_SOLLC^GP1_SOLLC^Q:28-652,H:8-630^66.45%ID^E:0^RecName: Full=Polygalacturonase-1 non-catalytic subunit beta;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF03181.12^BURP^BURP domain^436-649^E:1.3e-61",".",".","ENOG410YDAC^Noncatalytic subunit","KEGG:sly:543991","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0071555^biological_process^cell wall organization`GO:0009835^biological_process^fruit ripening",".",".","."]
["TRINITY_DN43804_c0_g2","leaves S. abrotanoides","leaves S. yangii",1.00167121609944,"0.0136669117421202","0.0292264129122889","TRINITY_DN43804_c0_g2_i1","GSO1_ARATH^GSO1_ARATH^Q:26-505,H:217-378^38.89%ID^E:8e-26^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:23-508,H:72-234^33.54%ID^E:7e-20^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:20-508,H:599-762^33.33%ID^E:5e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:32-502,H:579-736^35.22%ID^E:8e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:20-502,H:647-809^30.06%ID^E:3e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:23-505,H:385-546^32.52%ID^E:6e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:26-505,H:338-522^31.18%ID^E:7e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:92-502,H:336-473^33.09%ID^E:6e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:23-427,H:696-832^31.16%ID^E:2e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:56-508,H:131-306^30.51%ID^E:3e-11^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:14-502,H:478-640^30.91%ID^E:3e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43804_c0_g2_i1.p1","2-508[+]","GSO1_ARATH^GSO1_ARATH^Q:9-168,H:217-378^38.89%ID^E:7e-26^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:8-169,H:72-234^33.54%ID^E:7e-20^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:7-169,H:599-762^33.33%ID^E:4e-18^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:11-167,H:579-736^35.22%ID^E:7e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:7-167,H:647-809^30.06%ID^E:3e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:5-168,H:358-522^31.93%ID^E:5e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:8-168,H:385-546^32.52%ID^E:5e-14^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:31-167,H:336-473^33.09%ID^E:5e-13^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:8-142,H:696-832^31.16%ID^E:2e-12^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:19-169,H:131-306^30.51%ID^E:2e-11^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:5-167,H:478-640^30.91%ID^E:3e-10^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`GSO1_ARATH^GSO1_ARATH^Q:54-169,H:70-186^31.36%ID^E:5e-07^RecName: Full=LRR receptor-like serine/threonine-protein kinase GSO1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^30-46^E:0.068`PF13855.3^LRR_8^Leucine rich repeat^33-89^E:2.1e-10`PF00560.30^LRR_1^Leucine Rich Repeat^33-54^E:0.017`PF13306.3^LRR_5^Leucine rich repeats (6 copies)^54-135^E:0.014`PF00560.30^LRR_1^Leucine Rich Repeat^127-148^E:0.19",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT4G20140","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0090558^biological_process^plant epidermis development","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46710_c1_g1","leaves S. abrotanoides","leaves S. yangii",1.00166728038754,"0.00055480256517147","0.00163911909414593","TRINITY_DN46710_c1_g1_i1","GT7_ARATH^GT7_ARATH^Q:154-1491,H:1-445^57.62%ID^E:0^RecName: Full=Putative glycosyltransferase 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46710_c1_g1_i1.p1","28-1497[+]","GT7_ARATH^GT7_ARATH^Q:43-488,H:1-445^57.62%ID^E:0^RecName: Full=Putative glycosyltransferase 7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05637.9^Glyco_transf_34^galactosyl transferase GMA12/MNN10 family^167-438^E:2e-67",".",".","ENOG410XSJS^glycosyltransferase","KEGG:ath:AT2G22900","GO:0005768^cellular_component^endosome`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005802^cellular_component^trans-Golgi network`GO:0008378^molecular_function^galactosyltransferase activity`GO:0010392^biological_process^galactoglucomannan metabolic process`GO:0010192^biological_process^mucilage biosynthetic process`GO:0010214^biological_process^seed coat development","GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN43559_c4_g6","leaves S. abrotanoides","leaves S. yangii",-1.011975611322,{"v":3784647079.40897,"d":"3.78E+09"},"0.000136982400521564","TRINITY_DN43559_c4_g6_i1","VTI13_ARATH^VTI13_ARATH^Q:942-280,H:1-221^74.66%ID^E:9e-108^RecName: Full=Vesicle transport v-SNARE 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43559_c4_g6_i1.p1","274-942[-]","VTI13_ARATH^VTI13_ARATH^Q:1-221,H:1-221^74.66%ID^E:6e-121^RecName: Full=Vesicle transport v-SNARE 13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05008.12^V-SNARE^Vesicle transport v-SNARE protein N-terminus^12-90^E:8.6e-26`PF12352.5^V-SNARE_C^Snare region anchored in the vesicle membrane C-terminus^128-193^E:3.6e-22",".",".","ENOG4111J90^vesicle transport through interaction with t-SNAREs","KEGG:ath:AT3G29100`KO:K08493","GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0006886^biological_process^intracellular protein transport`GO:0061025^biological_process^membrane fusion`GO:0016192^biological_process^vesicle-mediated transport","GO:0006886^biological_process^intracellular protein transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45765_c1_g5","leaves S. abrotanoides","leaves S. yangii",-1.01230047484999,"0.00014333577005135","0.000472519766403952","TRINITY_DN45765_c1_g5_i2","Y5374_ARATH^Y5374_ARATH^Q:3-185,H:743-803^49.18%ID^E:9e-14^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g37450;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5374_ARATH^Y5374_ARATH^Q:298-639,H:806-908^29.57%ID^E:9e-14^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g37450;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45765_c1_g5_i2.p1","271-684[+]","Y3471_ARATH^Y3471_ARATH^Q:10-123,H:908-1021^34.78%ID^E:2e-11^RecName: Full=Putative receptor-like protein kinase At3g47110;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^9-109^E:2.5e-06`PF00069.22^Pkinase^Protein kinase domain^15-110^E:1.8e-07",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47110","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0006468^biological_process^protein phosphorylation`GO:0005524^molecular_function^ATP binding",".","."]
["TRINITY_DN46913_c2_g4","leaves S. abrotanoides","leaves S. yangii",-1.031767714926,"0.00198718852301737","0.00524600423135066","TRINITY_DN46913_c2_g4_i2","TMN7_ARATH^TMN7_ARATH^Q:1588-281,H:205-641^76.43%ID^E:0^RecName: Full=Transmembrane 9 superfamily member 7 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TMN7_ARATH^TMN7_ARATH^Q:2419-1970,H:27-178^67.76%ID^E:3e-59^RecName: Full=Transmembrane 9 superfamily member 7 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`TMN7_ARATH^TMN7_ARATH^Q:1905-1780,H:169-209^59.52%ID^E:8e-07^RecName: Full=Transmembrane 9 superfamily member 7 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46913_c2_g4_i2.p1","278-1609[-]","TMN7_ARATH^TMN7_ARATH^Q:8-443,H:205-641^76.43%ID^E:0^RecName: Full=Transmembrane 9 superfamily member 7 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02990.13^EMP70^Endomembrane protein 70^19-399^E:1.9e-165",".",".","ENOG410XPIW^transmembrane 9 superfamily","KEGG:ath:AT3G13772`KO:K17086","GO:0005737^cellular_component^cytoplasm`GO:0005768^cellular_component^endosome`GO:0010008^cellular_component^endosome membrane`GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0005802^cellular_component^trans-Golgi network`GO:0005774^cellular_component^vacuolar membrane`GO:0006878^biological_process^cellular copper ion homeostasis`GO:0006882^biological_process^cellular zinc ion homeostasis`GO:0006811^biological_process^ion transport","GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45950_c1_g4","leaves S. abrotanoides","leaves S. yangii",-1.03938144469589,"0.000156186871183994","0.000511169838142234","TRINITY_DN45950_c1_g4_i2","LOV1A_ARATH^LOV1A_ARATH^Q:341-3,H:51-163^27.43%ID^E:1e-09^RecName: Full=Putative inactive disease susceptibility protein LOV1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45950_c1_g4_i2.p2","3-596[-]","LOV1A_ARATH^LOV1A_ARATH^Q:86-198,H:51-163^27.43%ID^E:2e-11^RecName: Full=Putative inactive disease susceptibility protein LOV1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^119-195^E:6.9e-14",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G10920","GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0050832^biological_process^defense response to fungus`GO:0002238^biological_process^response to molecule of fungal origin","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN13302_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.04146950969541,"0.0102348605935053","0.0226569595936341","TRINITY_DN13302_c0_g1_i1","MAKR2_ARATH^MAKR2_ARATH^Q:1560-355,H:1-407^35.68%ID^E:1e-34^RecName: Full=Probable membrane-associated kinase regulator 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN13302_c0_g1_i1.p1","274-1560[-]","MAKR2_ARATH^MAKR2_ARATH^Q:1-402,H:1-407^37.73%ID^E:8e-50^RecName: Full=Probable membrane-associated kinase regulator 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YGY6^membrane-associated kinase regulator 2-like","KEGG:ath:AT1G64080","GO:0005886^cellular_component^plasma membrane",".",".","."]
["TRINITY_DN43863_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.0445643083915,"0.000615217427821783","0.0017984664049404","TRINITY_DN43863_c0_g1_i2","BH128_ARATH^BH128_ARATH^Q:952-332,H:160-359^50.48%ID^E:1e-54^RecName: Full=Transcription factor bHLH128;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43863_c0_g1_i2.p1","317-808[-]","BH129_ARATH^BH129_ARATH^Q:23-144,H:176-294^67.48%ID^E:6e-50^RecName: Full=Transcription factor bHLH129;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^95-140^E:1.2e-08",".",".","ENOG41108V5^transcription factor",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN87278_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.04874633656356,"0.0241364379796742","0.0480477967242117","TRINITY_DN87278_c0_g1_i1","PII2_ARATH^PII2_ARATH^Q:177-1259,H:29-382^37.84%ID^E:6e-48^RecName: Full=Piriformospora indica-insensitive protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87278_c0_g1_i1.p1","96-1493[+]","PII2_ARATH^PII2_ARATH^Q:28-407,H:29-401^37.79%ID^E:5e-58^RecName: Full=Piriformospora indica-insensitive protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^199-258^E:2.2e-08","sigP:1^28^0.671^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G13230","GO:0009507^cellular_component^chloroplast`GO:0005886^cellular_component^plasma membrane`GO:0009610^biological_process^response to symbiotic fungus`GO:0044403^biological_process^symbiosis, encompassing mutualism through parasitism","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44660_c1_g1","leaves S. abrotanoides","leaves S. yangii",-1.05024673720535,"0.00012896471465338","0.000428779614729377","TRINITY_DN44660_c1_g1_i1","PIN8_ARATH^PIN8_ARATH^Q:27-857,H:2-279^51.8%ID^E:2e-84^RecName: Full=Putative auxin efflux carrier component 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44660_c1_g1_i1.p1","63-965[+]","PIN8_ARATH^PIN8_ARATH^Q:1-288,H:14-302^49.83%ID^E:3e-105^RecName: Full=Putative auxin efflux carrier component 8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03547.15^Mem_trans^Membrane transport protein^1-175^E:1e-39`PF03547.15^Mem_trans^Membrane transport protein^175-289^E:1.7e-28",".",".","ENOG410YAQ9^auxin efflux carrier component","KEGG:ath:AT5G16530`KO:K13947","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0010329^molecular_function^auxin efflux transmembrane transporter activity`GO:0080161^molecular_function^auxin transmembrane transporter activity`GO:0010315^biological_process^auxin efflux`GO:0010252^biological_process^auxin homeostasis`GO:0009926^biological_process^auxin polar transport`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0080162^biological_process^intracellular auxin transport`GO:0009555^biological_process^pollen development","GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN47485_c7_g7","leaves S. abrotanoides","leaves S. yangii",-1.05138068457174,"0.00355509714684198","0.00885682897887154","TRINITY_DN47485_c7_g7_i1","R1A3_SOLDE^R1A3_SOLDE^Q:678-25,H:259-483^31.78%ID^E:6e-25^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47485_c7_g7_i1.p1","1-684[-]","R1A3_SOLDE^R1A3_SOLDE^Q:3-220,H:259-483^31.78%ID^E:5e-25^RecName: Full=Putative late blight resistance protein homolog R1A-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN45480_c2_g4","leaves S. abrotanoides","leaves S. yangii",-1.05688175341981,"0.00915833152281812","0.0205432688346391","TRINITY_DN45480_c2_g4_i1","FZR3_ARATH^FZR3_ARATH^Q:1824-334,H:1-481^78.04%ID^E:0^RecName: Full=Protein FIZZY-RELATED 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45480_c2_g4_i1.p1","331-1824[-]","FZR3_ARATH^FZR3_ARATH^Q:1-497,H:1-481^78.64%ID^E:0^RecName: Full=Protein FIZZY-RELATED 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00400.29^WD40^WD domain, G-beta repeat^307-342^E:3e-05`PF08662.8^eIF2A^Eukaryotic translation initiation factor eIF2A^334-469^E:0.00013`PF00400.29^WD40^WD domain, G-beta repeat^347-387^E:0.0035`PF00400.29^WD40^WD domain, G-beta repeat^436-472^E:0.00015",".",".","COG2319^wd repeat","KEGG:ath:AT5G13840`KO:K03364","GO:0051301^biological_process^cell division`GO:0007067^biological_process^mitotic nuclear division`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44574_c2_g4","leaves S. abrotanoides","leaves S. yangii",-1.05803987504905,"0.00402687927206867","0.00991196803866415","TRINITY_DN44574_c2_g4_i1","FRO1_ARATH^FRO1_ARATH^Q:701-300,H:6-103^29.1%ID^E:3e-23^RecName: Full=Probable ferric reduction oxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FRO1_ARATH^FRO1_ARATH^Q:240-70,H:103-159^47.37%ID^E:3e-23^RecName: Full=Probable ferric reduction oxidase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44574_c2_g4_i1.p1","279-767[-]","FRO5_ARATH^FRO5_ARATH^Q:30-145,H:4-86^28.45%ID^E:9e-11^RecName: Full=Ferric reduction oxidase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".",".","KEGG:ath:AT5G23990","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0000293^molecular_function^ferric-chelate reductase activity`GO:0046872^molecular_function^metal ion binding`GO:0006811^biological_process^ion transport`GO:0055114^biological_process^oxidation-reduction process",".",".","."]
["TRINITY_DN47393_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.06167578498265,"0.000916541581167048","0.00259212578105355","TRINITY_DN47393_c0_g1_i8","DMS3_ARATH^DMS3_ARATH^Q:1219-419,H:54-342^39.38%ID^E:1e-46^RecName: Full=Protein DEFECTIVE IN MERISTEM SILENCING 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47393_c0_g1_i8.p1","221-2299[-]","DMS3_ARATH^DMS3_ARATH^Q:343-627,H:36-342^37.74%ID^E:8e-48^RecName: Full=Protein DEFECTIVE IN MERISTEM SILENCING 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YVP4^NA","KEGG:ath:AT3G49250","GO:0000419^cellular_component^DNA-directed RNA polymerase V complex`GO:0042803^molecular_function^protein homodimerization activity`GO:0006306^biological_process^DNA methylation`GO:0031047^biological_process^gene silencing by RNA`GO:0070921^biological_process^regulation of production of siRNA involved in chromatin silencing by small RNA`GO:0080188^biological_process^RNA-directed DNA methylation",".",".","."]
["TRINITY_DN44221_c2_g2","leaves S. abrotanoides","leaves S. yangii",-1.06561443271104,"0.010883001437957","0.0239182543762386","TRINITY_DN44221_c2_g2_i1","CHX18_ARATH^CHX18_ARATH^Q:2409-67,H:1-785^65.61%ID^E:0^RecName: Full=Cation/H(+) antiporter 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44221_c2_g2_i1.p1","1-2409[-]","CHX18_ARATH^CHX18_ARATH^Q:1-781,H:1-785^65.99%ID^E:0^RecName: Full=Cation/H(+) antiporter 18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00999.18^Na_H_Exchanger^Sodium/hydrogen exchanger family^39-424^E:7.4e-67",".",".","COG0475^Sodium hydrogen exchanger","KEGG:ath:AT5G41610","GO:0016021^cellular_component^integral component of membrane`GO:0005770^cellular_component^late endosome`GO:0005451^molecular_function^monovalent cation:proton antiporter activity`GO:1902600^biological_process^hydrogen ion transmembrane transport`GO:0006813^biological_process^potassium ion transport`GO:0006885^biological_process^regulation of pH","GO:0015299^molecular_function^solute:proton antiporter activity`GO:0006812^biological_process^cation transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46275_c4_g3","leaves S. abrotanoides","leaves S. yangii",-1.06766474602856,"0.00180108202070036","0.00479363890951347","TRINITY_DN46275_c4_g3_i1","AL2C4_ARATH^AL2C4_ARATH^Q:195-1661,H:12-501^70.61%ID^E:0^RecName: Full=Aldehyde dehydrogenase family 2 member C4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46275_c4_g3_i1.p1","144-1664[+]","AL2C4_ARATH^AL2C4_ARATH^Q:18-506,H:12-501^70.61%ID^E:0^RecName: Full=Aldehyde dehydrogenase family 2 member C4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00171.19^Aldedh^Aldehyde dehydrogenase family^35-496^E:1.6e-176",".",".","COG1012^Dehydrogenase","KEGG:ath:AT3G24503`KO:K12355","GO:0005829^cellular_component^cytosol`GO:0004029^molecular_function^aldehyde dehydrogenase (NAD) activity`GO:0050269^molecular_function^coniferyl-aldehyde dehydrogenase activity`GO:0009699^biological_process^phenylpropanoid biosynthetic process","GO:0016491^molecular_function^oxidoreductase activity`GO:0008152^biological_process^metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46417_c1_g1","leaves S. abrotanoides","leaves S. yangii",-1.06837363401769,"0.00627747026798472","0.0146942203413351","TRINITY_DN46417_c1_g1_i1","CBDAS_CANSA^CBDAS_CANSA^Q:117-449,H:32-142^53.15%ID^E:1e-31^RecName: Full=Cannabidiolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis",".","TRINITY_DN46417_c1_g1_i1.p1","3-449[+]","CBDAS_CANSA^CBDAS_CANSA^Q:33-148,H:26-141^52.59%ID^E:7e-34^RecName: Full=Cannabidiolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis","PF01565.20^FAD_binding_4^FAD binding domain^88-147^E:2.5e-05","sigP:1^31^0.821^YES",".",".",".","GO:0048046^cellular_component^apoplast`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN47715_c3_g5","leaves S. abrotanoides","leaves S. yangii",-1.06939861481043,"0.00545312057497416","0.0129568144259589","TRINITY_DN47715_c3_g5_i1","FERON_ARATH^FERON_ARATH^Q:419-24,H:23-163^39.72%ID^E:3e-20^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47715_c3_g5_i1.p1","3-479[-]","FERON_ARATH^FERON_ARATH^Q:21-155,H:23-166^38.89%ID^E:7e-20^RecName: Full=Receptor-like protein kinase FERONIA;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF11721.5^Malectin^Di-glucose binding within endoplasmic reticulum^30-132^E:1.9e-07","sigP:1^24^0.889^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G51550","GO:0043680^cellular_component^filiform apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005622^cellular_component^intracellular`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0009506^cellular_component^plasmodesma`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0009738^biological_process^abscisic acid-activated signaling pathway`GO:0009742^biological_process^brassinosteroid mediated signaling pathway`GO:0050832^biological_process^defense response to fungus`GO:0009873^biological_process^ethylene-activated signaling pathway`GO:0009788^biological_process^negative regulation of abscisic acid-activated signaling pathway`GO:0030308^biological_process^negative regulation of cell growth`GO:0010483^biological_process^pollen tube reception`GO:0009791^biological_process^post-embryonic development`GO:0046777^biological_process^protein autophosphorylation`GO:0009741^biological_process^response to brassinosteroid`GO:0009723^biological_process^response to ethylene`GO:0048364^biological_process^root development`GO:0007338^biological_process^single fertilization",".",".","."]
["TRINITY_DN39563_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.07772964219827,"0.00864691980164882","0.0194844284136502","TRINITY_DN39563_c0_g1_i3","MCAC1_ARATH^MCAC1_ARATH^Q:180-1379,H:4-420^61.87%ID^E:9e-149^RecName: Full=Protein MID1-COMPLEMENTING ACTIVITY 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39563_c0_g1_i3.p1","174-1388[+]","MCAC1_ARATH^MCAC1_ARATH^Q:3-402,H:4-420^61.87%ID^E:2e-180^RecName: Full=Protein MID1-COMPLEMENTING ACTIVITY 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04749.14^PLAC8^PLAC8 family^285-382^E:6.4e-15",".",".","ENOG410YER5^Mid1-complementing activity","KEGG:ath:AT4G35920","GO:0005887^cellular_component^integral component of plasma membrane`GO:0005262^molecular_function^calcium channel activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0033500^biological_process^carbohydrate homeostasis`GO:0007638^biological_process^mechanosensory behavior`GO:0007231^biological_process^osmosensory signaling pathway",".",".","."]
["TRINITY_DN45779_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.08235105283948,"0.000366406490661984","0.00112162729195474","TRINITY_DN45779_c0_g1_i1","TBCE_ARATH^TBCE_ARATH^Q:1784-273,H:6-499^61.31%ID^E:0^RecName: Full=Tubulin-folding cofactor E;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45779_c0_g1_i1.p1","138-1829[-]","TBCE_ARATH^TBCE_ARATH^Q:16-519,H:6-499^61.31%ID^E:0^RecName: Full=Tubulin-folding cofactor E;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01302.22^CAP_GLY^CAP-Gly domain^22-89^E:1.3e-18",".",".","ENOG41103AE^Tubulin folding cofactor E-like","KEGG:ath:AT1G71440","GO:0009507^cellular_component^chloroplast`GO:0009793^biological_process^embryo development ending in seed dormancy",".",".","."]
["TRINITY_DN40461_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.0855437451329,"0.00147937282221095","0.00400645072522653","TRINITY_DN40461_c0_g1_i1","BLH2_ARATH^BLH2_ARATH^Q:683-1423,H:310-566^65.5%ID^E:2e-101^RecName: Full=BEL1-like homeodomain protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40461_c0_g1_i1.p1","278-1753[+]","BLH4_ARATH^BLH4_ARATH^Q:136-488,H:235-624^50.76%ID^E:1e-111^RecName: Full=BEL1-like homeodomain protein 4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07526.8^POX^Associated with HOX^139-263^E:4.2e-43`PF05920.8^Homeobox_KN^Homeobox KN domain^332-371^E:3.3e-18`PF00046.26^Homeobox^Homeobox domain^334-371^E:2.4e-07",".",".","ENOG410XPMQ^homeobox","KEGG:ath:AT2G23760","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009965^biological_process^leaf morphogenesis`GO:0006351^biological_process^transcription, DNA-templated","GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN41144_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.09314343130678,"0.000246218285814482","0.000776416648128101","TRINITY_DN41144_c0_g1_i4","DCL2_ARATH^DCL2_ARATH^Q:465-151,H:1081-1185^57.14%ID^E:6e-32^RecName: Full=Endoribonuclease Dicer homolog 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`DCL2_ARATH^DCL2_ARATH^Q:47-3,H:1185-1199^93.33%ID^E:6e-32^RecName: Full=Endoribonuclease Dicer homolog 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41144_c0_g1_i4.p1","97-474[-]","DCL2_ARATH^DCL2_ARATH^Q:4-108,H:1081-1185^57.14%ID^E:1e-31^RecName: Full=Endoribonuclease Dicer homolog 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG0571^Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)`COG1111^helicase","KEGG:ath:AT3G03300`KO:K11592","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0016442^cellular_component^RISC complex`GO:0005524^molecular_function^ATP binding`GO:0004386^molecular_function^helicase activity`GO:0046872^molecular_function^metal ion binding`GO:0004525^molecular_function^ribonuclease III activity`GO:0003723^molecular_function^RNA binding`GO:0051607^biological_process^defense response to virus`GO:0010216^biological_process^maintenance of DNA methylation`GO:0010267^biological_process^production of ta-siRNAs involved in RNA interference`GO:0090501^biological_process^RNA phosphodiester bond hydrolysis`GO:0090502^biological_process^RNA phosphodiester bond hydrolysis, endonucleolytic",".",".","."]
["TRINITY_DN46310_c3_g1","leaves S. abrotanoides","leaves S. yangii",-1.09334583260219,"0.000330722262917827","0.00101941485741404","TRINITY_DN46310_c3_g1_i2","SFH12_ARATH^SFH12_ARATH^Q:637-182,H:388-542^50.97%ID^E:7e-16^RecName: Full=Phosphatidylinositol/phosphatidylcholine transfer protein SFH12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46310_c3_g1_i2.p1","179-577[-]","SFH12_ARATH^SFH12_ARATH^Q:1-132,H:410-542^51.13%ID^E:3e-30^RecName: Full=Phosphatidylinositol/phosphatidylcholine transfer protein SFH12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XRSQ^Transfer protein","KEGG:ath:AT4G36490","GO:0000139^cellular_component^Golgi membrane`GO:0005886^cellular_component^plasma membrane`GO:0015031^biological_process^protein transport",".",".","."]
["TRINITY_DN44462_c4_g1","leaves S. abrotanoides","leaves S. yangii",-1.10925090537198,"0.0045227740277036","0.0109762462861367","TRINITY_DN44462_c4_g1_i1","MLO1_ARATH^MLO1_ARATH^Q:132-827,H:247-478^71.55%ID^E:1e-113^RecName: Full=MLO-like protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44462_c4_g1_i1.p1","51-911[+]","MLO1_ARATH^MLO1_ARATH^Q:15-259,H:234-478^70.2%ID^E:2e-125^RecName: Full=MLO-like protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03094.12^Mlo^Mlo family^14-256^E:4.8e-110",".",".","ENOG410ZUVB^May be involved in modulation of pathogen defense and leaf cell death (By similarity)","KEGG:ath:AT4G02600`KO:K08472","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus","GO:0006952^biological_process^defense response`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46697_c0_g2","leaves S. abrotanoides","leaves S. yangii",-1.11386958426533,"0.00126157364170132","0.00347056278893299","TRINITY_DN46697_c0_g2_i3","AB32G_ARATH^AB32G_ARATH^Q:2456-4822,H:630-1420^76.86%ID^E:0^RecName: Full=ABC transporter G family member 32 {ECO:0000303|PubMed:18299247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB32G_ARATH^AB32G_ARATH^Q:589-2343,H:34-618^72.82%ID^E:0^RecName: Full=ABC transporter G family member 32 {ECO:0000303|PubMed:18299247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB32G_ARATH^AB32G_ARATH^Q:3071-4810,H:142-759^23.7%ID^E:7e-25^RecName: Full=ABC transporter G family member 32 {ECO:0000303|PubMed:18299247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB32G_ARATH^AB32G_ARATH^Q:1030-2328,H:876-1271^22.08%ID^E:7e-12^RecName: Full=ABC transporter G family member 32 {ECO:0000303|PubMed:18299247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46697_c0_g2_i3.p2","433-2346[+]","AB32G_ARATH^AB32G_ARATH^Q:22-637,H:1-618^71.36%ID^E:0^RecName: Full=ABC transporter G family member 32 {ECO:0000303|PubMed:18299247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB32G_ARATH^AB32G_ARATH^Q:166-632,H:842-1271^23.61%ID^E:5e-21^RecName: Full=ABC transporter G family member 32 {ECO:0000303|PubMed:18299247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF14510.3^ABC_trans_N^ABC-transporter extracellular N-terminal^83-145^E:1.9e-10`PF00005.24^ABC_tran^ABC transporter^170-353^E:2.2e-16`PF01061.21^ABC2_membrane^ABC-2 type transporter^507-634^E:3.2e-17",".",".","COG0842^(ABC) transporter","KEGG:ath:AT2G26910","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0042335^biological_process^cuticle development`GO:0006855^biological_process^drug transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47661_c2_g6","leaves S. abrotanoides","leaves S. yangii",-1.11982428395463,"0.00183151134835484","0.00486392585669939","TRINITY_DN47661_c2_g6_i1","MD37C_ARATH^MD37C_ARATH^Q:2-391,H:360-489^74.62%ID^E:8e-52^RecName: Full=Probable mediator of RNA polymerase II transcription subunit 37c;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47661_c2_g6_i1.p1","2-391[+]","HSP72_SOLLC^HSP72_SOLLC^Q:1-130,H:360-489^74.62%ID^E:7e-61^RecName: Full=Heat shock cognate 70 kDa protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon","PF00012.17^HSP70^Hsp70 protein^2-130^E:4.5e-47",".",".","COG0443^Heat shock protein",".","GO:0005524^molecular_function^ATP binding",".",".","."]
["TRINITY_DN43717_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.12801548563119,"0.00173058396573864","0.0046229585658193","TRINITY_DN43717_c0_g1_i3","APY_SOLTU^APY_SOLTU^Q:1412-204,H:42-443^54.09%ID^E:1e-131^RecName: Full=Apyrase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN43717_c0_g1_i3.p1","198-1457[-]","APY_SOLTU^APY_SOLTU^Q:12-418,H:38-443^53.81%ID^E:2e-153^RecName: Full=Apyrase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF01150.14^GDA1_CD39^GDA1/CD39 (nucleoside phosphatase) family^16-418^E:1.2e-100","sigP:1^21^0.663^YES",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity","GO:0016787^molecular_function^hydrolase activity",".","."]
["TRINITY_DN45810_c1_g1","leaves S. abrotanoides","leaves S. yangii",-1.12838901853187,"0.00133165356319825","0.00364035463717245","TRINITY_DN45810_c1_g1_i1","R1B8_SOLDE^R1B8_SOLDE^Q:4-672,H:972-1184^32%ID^E:2e-15^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45810_c1_g1_i1.p1","1-687[+]","R1B8_SOLDE^R1B8_SOLDE^Q:2-224,H:972-1184^32%ID^E:1e-15^RecName: Full=Putative late blight resistance protein homolog R1B-8;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN40002_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.12939832256285,"0.00713843244222337","0.0164844034344742","TRINITY_DN40002_c0_g1_i2","IQD31_ARATH^IQD31_ARATH^Q:71-1639,H:1-575^31.62%ID^E:1e-37^RecName: Full=Protein IQ-DOMAIN 31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40002_c0_g1_i2.p1","71-1678[+]","IQD31_ARATH^IQD31_ARATH^Q:1-523,H:1-575^31.62%ID^E:4e-42^RecName: Full=Protein IQ-DOMAIN 31;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00612.24^IQ^IQ calmodulin-binding motif^111-130^E:0.00043`PF00612.24^IQ^IQ calmodulin-binding motif^135-150^E:0.045`PF13178.3^DUF4005^Protein of unknown function (DUF4005)^420-511^E:7.1e-11",".",".","ENOG410YAVA^IQ-domain","KEGG:ath:AT1G74690","GO:0005829^cellular_component^cytosol`GO:0005875^cellular_component^microtubule associated complex`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44422_c2_g6","leaves S. abrotanoides","leaves S. yangii",-1.13825437411867,"0.0013856738063154","0.00377372158800477","TRINITY_DN44422_c2_g6_i2","MDR_ORYSJ^MDR_ORYSJ^Q:2397-124,H:495-1236^56.52%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3852-3118,H:94-310^38.78%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3025-2492,H:314-491^59.55%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:1815-124,H:36-597^37.44%ID^E:2e-87^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3037-2498,H:948-1127^47.22%ID^E:1e-42^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:3813-3151,H:744-937^18.92%ID^E:1e-42^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44422_c2_g6_i2.p1","94-2199[-]","MDR_ORYSJ^MDR_ORYSJ^Q:2-692,H:562-1236^54.34%ID^E:0^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza`MDR_ORYSJ^MDR_ORYSJ^Q:129-692,H:36-597^37.61%ID^E:5e-95^RecName: Full=Putative multidrug resistance protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00664.20^ABC_membrane^ABC transporter transmembrane region^130-401^E:1.4e-51`PF00005.24^ABC_tran^ABC transporter^471-620^E:5.4e-37",".",".","COG1132^(ABC) transporter",".","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN41639_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.13925975554599,{"v":3146894439.82356,"d":"3.15E+09"},"0.0001156073553783","TRINITY_DN41639_c0_g1_i26","AGT23_ARATH^AGT23_ARATH^Q:2596-1745,H:42-325^80.63%ID^E:0^RecName: Full=Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AGT23_ARATH^AGT23_ARATH^Q:1679-1254,H:326-467^70.42%ID^E:0^RecName: Full=Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AGT23_ARATH^AGT23_ARATH^Q:1168-1109,H:460-481^54.55%ID^E:0^RecName: Full=Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41639_c0_g1_i26.p1","1724-2710[-]","AGT23_ARATH^AGT23_ARATH^Q:39-322,H:42-325^80.63%ID^E:8e-176^RecName: Full=Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00202.18^Aminotran_3^Aminotransferase class-III^81-324^E:3.3e-56",".",".","COG0160^transaminase activity","KEGG:ath:AT3G08860`KO:K00827","GO:0005739^cellular_component^mitochondrion`GO:0008453^molecular_function^alanine-glyoxylate transaminase activity`GO:0042802^molecular_function^identical protein binding`GO:0030170^molecular_function^pyridoxal phosphate binding`GO:0043562^biological_process^cellular response to nitrogen levels`GO:0009853^biological_process^photorespiration","GO:0008483^molecular_function^transaminase activity`GO:0030170^molecular_function^pyridoxal phosphate binding",".","."]
["TRINITY_DN44800_c2_g1","leaves S. abrotanoides","leaves S. yangii",-1.14485345101165,"0.0209838532672253","0.0425572759268889","TRINITY_DN44800_c2_g1_i3","WTR13_ARATH^WTR13_ARATH^Q:143-1084,H:7-357^57.3%ID^E:6e-132^RecName: Full=WAT1-related protein At2g37460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44800_c2_g1_i3.p1","119-1105[+]","WTR13_ARATH^WTR13_ARATH^Q:9-322,H:7-357^57.3%ID^E:2e-134^RecName: Full=WAT1-related protein At2g37460;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00892.17^EamA^EamA-like transporter family^152-291^E:1.5e-13",".",".","ENOG410YBPN^Auxin-induced protein","KEGG:ath:AT2G37460","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0022857^molecular_function^transmembrane transporter activity`GO:0055085^biological_process^transmembrane transport`GO:0006810^biological_process^transport","GO:0016020^cellular_component^membrane`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN45613_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.14623786382496,"0.000207415506063433","0.000663473663732214","TRINITY_DN45613_c0_g1_i3","SMC6B_ARATH^SMC6B_ARATH^Q:1525-2,H:448-954^57.48%ID^E:0^RecName: Full=Structural maintenance of chromosomes protein 6B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45613_c0_g1_i3.p1","2-1549[-]","SMC6B_ARATH^SMC6B_ARATH^Q:9-516,H:448-954^57.48%ID^E:0^RecName: Full=Structural maintenance of chromosomes protein 6B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","COG1196^Required for chromosome condensation and partitioning (By similarity)","KEGG:ath:AT5G61460","GO:0005634^cellular_component^nucleus`GO:0030915^cellular_component^Smc5-Smc6 complex`GO:0005524^molecular_function^ATP binding`GO:0006302^biological_process^double-strand break repair`GO:0000724^biological_process^double-strand break repair via homologous recombination`GO:0010165^biological_process^response to X-ray`GO:0007062^biological_process^sister chromatid cohesion",".",".","."]
["TRINITY_DN44213_c1_g3","leaves S. abrotanoides","leaves S. yangii",-1.15728250642826,"0.00732425148335833","0.0168403644982729","TRINITY_DN44213_c1_g3_i11","SCAR1_ARATH^SCAR1_ARATH^Q:342-1058,H:1-234^53.11%ID^E:2e-67^RecName: Full=Protein SCAR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SCAR1_ARATH^SCAR1_ARATH^Q:1865-2056,H:746-815^45.71%ID^E:2e-06^RecName: Full=Protein SCAR1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44213_c1_g3_i11.p1","1118-2059[+]","SCAR3_ARATH^SCAR3_ARATH^Q:86-187,H:719-830^38.26%ID^E:6e-09^RecName: Full=Protein SCAR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SCAR3_ARATH^SCAR3_ARATH^Q:191-313,H:907-1020^33.09%ID^E:6e-08^RecName: Full=Protein SCAR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410XRBQ^WAS protein family, member",".","GO:0005856^cellular_component^cytoskeleton`GO:0031209^cellular_component^SCAR complex`GO:0030036^biological_process^actin cytoskeleton organization`GO:0051127^biological_process^positive regulation of actin nucleation",".",".","."]
["TRINITY_DN46280_c4_g2","leaves S. abrotanoides","leaves S. yangii",-1.15748438997076,"0.00664035769207166","0.0154456947320979","TRINITY_DN46280_c4_g2_i3","WRK48_ARATH^WRK48_ARATH^Q:911-1075,H:239-293^69.09%ID^E:1e-16^RecName: Full=Probable WRKY transcription factor 48;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`WRK48_ARATH^WRK48_ARATH^Q:606-716,H:208-244^81.08%ID^E:2e-13^RecName: Full=Probable WRKY transcription factor 48;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46280_c4_g2_i3.p1","120-710[+]","WRK23_ARATH^WRK23_ARATH^Q:145-196,H:143-194^82.69%ID^E:1e-23^RecName: Full=Probable WRKY transcription factor 23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03106.12^WRKY^WRKY DNA -binding domain^176-196^E:2.2e-07",".",".","ENOG410YRNP^Transcription factor","KEGG:ath:AT2G47260","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0009733^biological_process^response to auxin`GO:0009624^biological_process^response to nematode`GO:0006351^biological_process^transcription, DNA-templated","GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated",".","."]
["TRINITY_DN119707_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.15996080285717,"0.000923963012055712","0.00261175783779061","TRINITY_DN119707_c0_g1_i1","GRC13_ARATH^GRC13_ARATH^Q:553-263,H:1-97^68.04%ID^E:6e-44^RecName: Full=Glutaredoxin-C13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN119707_c0_g1_i1.p1","254-553[-]","GRC13_ARATH^GRC13_ARATH^Q:1-97,H:1-97^68.04%ID^E:2e-45^RecName: Full=Glutaredoxin-C13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00462.21^Glutaredoxin^Glutaredoxin^13-75^E:6.4e-11",".",".","COG0695^Glutaredoxin","KEGG:ath:AT2G47880","GO:0005737^cellular_component^cytoplasm`GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis","GO:0009055^molecular_function^electron carrier activity`GO:0015035^molecular_function^protein disulfide oxidoreductase activity`GO:0045454^biological_process^cell redox homeostasis",".","."]
["TRINITY_DN44984_c0_g2","leaves S. abrotanoides","leaves S. yangii",-1.16524335503746,"0.00223421034418888","0.00583515605545983","TRINITY_DN44984_c0_g2_i4","NIPA6_ARATH^NIPA6_ARATH^Q:395-1165,H:50-306^71.98%ID^E:3e-120^RecName: Full=Probable magnesium transporter NIPA6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44984_c0_g2_i4.p1","248-1282[+]","NIPA6_ARATH^NIPA6_ARATH^Q:1-306,H:1-306^71.9%ID^E:1e-158^RecName: Full=Probable magnesium transporter NIPA6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05653.11^Mg_trans_NIPA^Magnesium transporter NIPA^4-295^E:2.5e-130`PF00892.17^EamA^EamA-like transporter family^55-121^E:1.1e-06",".",".","ENOG410XNR8^NIPA-like domain containing","KEGG:ath:AT2G21120","GO:0005769^cellular_component^early endosome`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015095^molecular_function^magnesium ion transmembrane transporter activity`GO:0015693^biological_process^magnesium ion transport","GO:0015095^molecular_function^magnesium ion transmembrane transporter activity`GO:0015693^biological_process^magnesium ion transport`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44713_c1_g3","leaves S. abrotanoides","leaves S. yangii",-1.16575214048058,"0.000200932404790025","0.000644439855928413","TRINITY_DN44713_c1_g3_i2","GAT1_ARATH^GAT1_ARATH^Q:1461-139,H:9-451^58.47%ID^E:6e-168^RecName: Full=GABA transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44713_c1_g3_i2.p1","136-1500[-]","GAT1_ARATH^GAT1_ARATH^Q:14-454,H:9-451^58.47%ID^E:0^RecName: Full=GABA transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01490.15^Aa_trans^Transmembrane amino acid transporter protein^34-436^E:2.4e-54",".",".","COG0814^amino acid transport","KEGG:ath:AT1G08230","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015185^molecular_function^gamma-aminobutyric acid transmembrane transporter activity`GO:0015812^biological_process^gamma-aminobutyric acid transport",".",".","."]
["TRINITY_DN47372_c6_g1","leaves S. abrotanoides","leaves S. yangii",-1.16594860652631,"0.0164817144532421","0.0344407726012373","TRINITY_DN47372_c6_g1_i1","PUB23_ARATH^PUB23_ARATH^Q:128-1312,H:10-404^35.14%ID^E:4e-61^RecName: Full=E3 ubiquitin-protein ligase PUB23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47372_c6_g1_i1.p1","110-1312[+]","PUB23_ARATH^PUB23_ARATH^Q:7-401,H:10-404^35.14%ID^E:9e-62^RecName: Full=E3 ubiquitin-protein ligase PUB23;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04564.12^U-box^U-box domain^10-77^E:1.4e-15",".",".","ENOG410YC1Z^e3 ubiquitin-protein ligase","KEGG:ath:AT2G35930","GO:0005829^cellular_component^cytosol`GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0006952^biological_process^defense response`GO:0051865^biological_process^protein autoubiquitination`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin`GO:0009414^biological_process^response to water deprivation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN45309_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.17896429923753,"0.0170557379282592","0.0355073752414108","TRINITY_DN45309_c0_g1_i2","APC1_ARATH^APC1_ARATH^Q:32-3331,H:704-1678^59.46%ID^E:0^RecName: Full=Anaphase-promoting complex subunit 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45309_c0_g1_i2.p1","401-3346[+]","APC1_ARATH^APC1_ARATH^Q:1-977,H:826-1678^59.43%ID^E:0^RecName: Full=Anaphase-promoting complex subunit 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01851.19^PC_rep^Proteasome/cyclosome repeat^465-497^E:0.00012",".",".","ENOG410XQ83^Anaphase promoting complex subunit 1","KEGG:ath:AT5G05560`KO:K03348","GO:0005680^cellular_component^anaphase-promoting complex`GO:0010252^biological_process^auxin homeostasis`GO:0051301^biological_process^cell division`GO:0009793^biological_process^embryo development ending in seed dormancy`GO:0009553^biological_process^embryo sac development`GO:0007067^biological_process^mitotic nuclear division`GO:0048481^biological_process^plant ovule development`GO:0016567^biological_process^protein ubiquitination",".",".","."]
["TRINITY_DN40381_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.18353913061985,"0.0193446639026567","0.0396742550559891","TRINITY_DN40381_c0_g1_i1","LRK81_ARATH^LRK81_ARATH^Q:2243-261,H:22-686^59.76%ID^E:0^RecName: Full=L-type lectin-domain containing receptor kinase VIII.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN40381_c0_g1_i1.p1","180-2318[-]","LRK81_ARATH^LRK81_ARATH^Q:9-686,H:7-686^62.84%ID^E:0^RecName: Full=L-type lectin-domain containing receptor kinase VIII.1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00139.16^Lectin_legB^Legume lectin domain^27-263^E:1.1e-56`PF00069.22^Pkinase^Protein kinase domain^382-581^E:6.3e-47`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^383-581^E:6.4e-42","sigP:1^25^0.858^YES",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G53380","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0030246^molecular_function^carbohydrate binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0030246^molecular_function^carbohydrate binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN22086_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.1920298442635,"0.00151619432872487","0.00409598204884062","TRINITY_DN22086_c0_g1_i1","Y3589_ARATH^Y3589_ARATH^Q:1261-335,H:6-311^52.41%ID^E:9e-109^RecName: Full=PTI1-like tyrosine-protein kinase At3g15890;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22086_c0_g1_i1.p1","143-1276[-]","Y3589_ARATH^Y3589_ARATH^Q:6-314,H:6-311^52.41%ID^E:2e-110^RecName: Full=PTI1-like tyrosine-protein kinase At3g15890;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^44-311^E:3.2e-43`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^47-312^E:2.8e-43",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT3G15890","GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004715^molecular_function^non-membrane spanning protein tyrosine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN23614_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.19236134437046,"0.00285922035800557","0.00730112162251826","TRINITY_DN23614_c0_g1_i2","YSL7_ARATH^YSL7_ARATH^Q:201-2198,H:16-685^70.54%ID^E:0^RecName: Full=Probable metal-nicotianamine transporter YSL7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN23614_c0_g1_i2.p1","147-2207[+]","YSL7_ARATH^YSL7_ARATH^Q:14-684,H:9-685^70.54%ID^E:0^RecName: Full=Probable metal-nicotianamine transporter YSL7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03169.12^OPT^OPT oligopeptide transporter protein^45-658^E:2e-149",".",".","COG1297^oligo-peptide transporter","KEGG:ath:AT1G65730","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0055085^biological_process^transmembrane transport","GO:0055085^biological_process^transmembrane transport",".","."]
["TRINITY_DN47443_c1_g5","leaves S. abrotanoides","leaves S. yangii",-1.20452441886993,"0.0109317496545338","0.0240116934306283","TRINITY_DN47443_c1_g5_i1","Y1571_ARATH^Y1571_ARATH^Q:3310-107,H:37-1029^38.13%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47443_c1_g5_i1.p1","2-3403[-]","Y1571_ARATH^Y1571_ARATH^Q:24-1099,H:29-1029^38.58%ID^E:0^RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g35710;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^27-65^E:6.5e-09`PF00560.30^LRR_1^Leucine Rich Repeat^696-718^E:0.79`PF00560.30^LRR_1^Leucine Rich Repeat^749-767^E:1.3`PF00560.30^LRR_1^Leucine Rich Repeat^769-790^E:0.66`PF00069.22^Pkinase^Protein kinase domain^924-1096^E:1.5e-35`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^926-1095^E:2.1e-31","sigP:1^24^0.763^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G35710","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN41953_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.22441460470754,{"v":3269127803.13709,"d":"3.27E+09"},"0.000119653704463787","TRINITY_DN41953_c0_g1_i2","Y2579_ARATH^Y2579_ARATH^Q:343-3051,H:37-940^49.35%ID^E:0^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41953_c0_g1_i2.p1","232-3117[+]","Y2579_ARATH^Y2579_ARATH^Q:15-940,H:16-940^49.74%ID^E:0^RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^32-67^E:1.3e-08`PF13516.3^LRR_6^Leucine Rich repeat^118-133^E:1.8`PF13855.3^LRR_8^Leucine rich repeat^165-225^E:1.7e-07`PF00560.30^LRR_1^Leucine Rich Repeat^239-260^E:1.7`PF13855.3^LRR_8^Leucine rich repeat^285-345^E:3.4e-09`PF00560.30^LRR_1^Leucine Rich Repeat^286-308^E:0.019`PF00560.30^LRR_1^Leucine Rich Repeat^310-332^E:1.4`PF13855.3^LRR_8^Leucine rich repeat^477-536^E:9e-09`PF00069.22^Pkinase^Protein kinase domain^693-819^E:1.9e-11`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^734-939^E:1.2e-13","sigP:1^26^0.775^YES",".","COG4886^leucine Rich Repeat","KEGG:ath:AT2G25790","GO:0005783^cellular_component^endoplasmic reticulum`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004672^molecular_function^protein kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN38366_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.22771408809338,"0.00208257468700587","0.00547722928310978","TRINITY_DN38366_c0_g1_i3","SAU22_ARATH^SAU22_ARATH^Q:10-243,H:4-77^60.49%ID^E:3e-26^RecName: Full=Auxin-responsive protein SAUR22 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`SAU22_ARATH^SAU22_ARATH^Q:348-473,H:48-89^61.9%ID^E:8e-13^RecName: Full=Auxin-responsive protein SAUR22 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38366_c0_g1_i3.p1","1-351[+]","SAU22_ARATH^SAU22_ARATH^Q:4-81,H:4-77^60.49%ID^E:2e-27^RecName: Full=Auxin-responsive protein SAUR22 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02519.11^Auxin_inducible^Auxin responsive protein^23-81^E:1.6e-23",".",".","ENOG4111DHX^auxin-responsive protein","KEGG:ath:AT5G18050`KO:K14488","GO:0005886^cellular_component^plasma membrane`GO:0009734^biological_process^auxin-activated signaling pathway`GO:0007275^biological_process^multicellular organism development`GO:0040008^biological_process^regulation of growth","GO:0009733^biological_process^response to auxin",".","."]
["TRINITY_DN45255_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.22896127767905,{"v":8824834909.28618,"d":"8.82E+09"},"0.000301367558523835","TRINITY_DN45255_c0_g1_i1","PME1_ARATH^PME1_ARATH^Q:139-1800,H:1-581^57.95%ID^E:0^RecName: Full=Pectinesterase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45255_c0_g1_i1.p1","139-1818[+]","PME3_PHAVU^PME3_PHAVU^Q:1-559,H:1-580^56.78%ID^E:0^RecName: Full=Pectinesterase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus","PF04043.12^PMEI^Plant invertase/pectin methylesterase inhibitor^70-211^E:1.9e-23`PF01095.16^Pectinesterase^Pectinesterase^253-545^E:3.8e-131",".",".",".",".","GO:0005618^cellular_component^cell wall`GO:0005576^cellular_component^extracellular region`GO:0045330^molecular_function^aspartyl esterase activity`GO:0004857^molecular_function^enzyme inhibitor activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0045490^biological_process^pectin catabolic process","GO:0004857^molecular_function^enzyme inhibitor activity`GO:0030599^molecular_function^pectinesterase activity`GO:0042545^biological_process^cell wall modification`GO:0005618^cellular_component^cell wall",".","."]
["TRINITY_DN45027_c0_g2","leaves S. abrotanoides","leaves S. yangii",-1.236389958602,"0.000804724770965753","0.0023031121402482","TRINITY_DN45027_c0_g2_i3","Y5457_ARATH^Y5457_ARATH^Q:1685-342,H:179-614^66.96%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g45780;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y5457_ARATH^Y5457_ARATH^Q:1876-1679,H:111-176^68.18%ID^E:6e-08^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g45780;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45027_c0_g2_i3.p1","339-1574[-]","Y5457_ARATH^Y5457_ARATH^Q:6-411,H:221-614^68.47%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g45780;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^88-359^E:1.7e-42`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^89-360^E:3.6e-41",".",".","ENOG410Y91W^promastigote surface antigen protein 2 PSA2. Source GeneDB","KEGG:ath:AT5G45780","GO:0016021^cellular_component^integral component of membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN46973_c1_g5","leaves S. abrotanoides","leaves S. yangii",-1.26368321042357,"0.000116590019376585","0.000390498551285303","TRINITY_DN46973_c1_g5_i1","Y3475_ARATH^Y3475_ARATH^Q:2978-243,H:78-999^42.73%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:2723-1374,H:67-519^31.72%ID^E:1e-30^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46973_c1_g5_i1.p1","228-2987[-]","Y3475_ARATH^Y3475_ARATH^Q:4-915,H:78-999^43.06%ID^E:0^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:1-446,H:147-593^32.89%ID^E:5e-49^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:89-538,H:67-519^34.2%ID^E:7e-45^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:278-496,H:60-302^34.84%ID^E:1e-22^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^40-99^E:1.3e-06`PF00560.30^LRR_1^Leucine Rich Repeat^41-63^E:0.43`PF00560.30^LRR_1^Leucine Rich Repeat^479-499^E:0.45`PF00069.22^Pkinase^Protein kinase domain^620-908^E:2.4e-38`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^621-910^E:1.3e-37",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47685_c2_g11","leaves S. abrotanoides","leaves S. yangii",-1.2695604236501,{"v":5891571685.72924,"d":"5.89E+09"},"0.000206360828224789","TRINITY_DN47685_c2_g11_i1","ATPAM_BETVU^ATPAM_BETVU^Q:1939-428,H:1-504^95.24%ID^E:0^RecName: Full=ATP synthase subunit alpha, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Beta`ATPAM_BETVU^ATPAM_BETVU^Q:407-3,H:215-348^97.78%ID^E:3e-79^RecName: Full=ATP synthase subunit alpha, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Beta",".","TRINITY_DN47685_c2_g11_i1.p1","419-1939[-]","ATPAM_BETVU^ATPAM_BETVU^Q:1-504,H:1-504^95.24%ID^E:0^RecName: Full=ATP synthase subunit alpha, mitochondrial;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Beta","PF02874.20^ATP-synt_ab_N^ATP synthase alpha/beta family, beta-barrel domain^28-94^E:1.9e-19`PF00006.22^ATP-synt_ab^ATP synthase alpha/beta family, nucleotide-binding domain^151-375^E:8.1e-74`PF00306.24^ATP-synt_ab_C^ATP synthase alpha/beta chain, C terminal domain^382-497^E:2.7e-41",".",".",".",".","GO:0000275^cellular_component^mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)`GO:0005739^cellular_component^mitochondrion`GO:0005524^molecular_function^ATP binding`GO:0046933^molecular_function^proton-transporting ATP synthase activity, rotational mechanism`GO:0046961^molecular_function^proton-transporting ATPase activity, rotational mechanism`GO:0006754^biological_process^ATP biosynthetic process`GO:0015991^biological_process^ATP hydrolysis coupled proton transport`GO:0015986^biological_process^ATP synthesis coupled proton transport","GO:0015992^biological_process^proton transport`GO:0046034^biological_process^ATP metabolic process`GO:0005524^molecular_function^ATP binding`GO:0016820^molecular_function^hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances`GO:0015991^biological_process^ATP hydrolysis coupled proton transport`GO:0033178^cellular_component^proton-transporting two-sector ATPase complex, catalytic domain",".","."]
["TRINITY_DN44875_c6_g1","leaves S. abrotanoides","leaves S. yangii",-1.27053841386398,"0.0027678065151055","0.00708181187542974","TRINITY_DN44875_c6_g1_i9","DNJ10_ARATH^DNJ10_ARATH^Q:1275-343,H:1-312^62.3%ID^E:1e-128^RecName: Full=Chaperone protein dnaJ 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44875_c6_g1_i9.p1","304-1275[-]","DNJ10_ARATH^DNJ10_ARATH^Q:1-311,H:1-312^62.3%ID^E:7e-135^RecName: Full=Chaperone protein dnaJ 10;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00226.28^DnaJ^DnaJ domain^7-68^E:6.5e-24`PF14308.3^DnaJ-X^X-domain of DnaJ-containing^131-314^E:1.7e-44",".",".","COG2214^DNAj domain protein","KEGG:ath:AT1G76700",".",".",".","."]
["TRINITY_DN102248_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.27671960455541,"0.00639912326787367","0.0149420386096173","TRINITY_DN102248_c0_g1_i1","CYPH1_SALMI^CYPH1_SALMI^Q:1700-216,H:1-492^62.83%ID^E:0^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia",".","TRINITY_DN102248_c0_g1_i1.p1","207-1718[-]","CYPH1_SALMI^CYPH1_SALMI^Q:7-501,H:1-492^62.83%ID^E:0^RecName: Full=Ferruginol synthase {ECO:0000303|PubMed:23812755};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia","PF00067.19^p450^Cytochrome P450^37-486^E:2e-100",".",".",".",".","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0004497^molecular_function^monooxygenase activity`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN22956_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.28466037989355,"0.0095000971492203","0.0212115581754638","TRINITY_DN22956_c0_g1_i1","DRL28_ARATH^DRL28_ARATH^Q:1782-496,H:495-892^24.83%ID^E:6e-14^RecName: Full=Probable disease resistance protein At4g27220;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22956_c0_g1_i1.p1","409-1968[-]","DRL28_ARATH^DRL28_ARATH^Q:63-491,H:495-892^24.83%ID^E:2e-14^RecName: Full=Probable disease resistance protein At4g27220;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^66-119^E:8.7e-10",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT4G27220","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46089_c0_g2","leaves S. abrotanoides","leaves S. yangii",-1.28762506407454,"0.00888860446348913","0.0199876560557691","TRINITY_DN46089_c0_g2_i7","ARC2B_ARATH^ARC2B_ARATH^Q:781-65,H:1-238^47.33%ID^E:4e-68^RecName: Full=Actin-related protein 2/3 complex subunit 2B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46089_c0_g2_i7.p1","218-781[-]","ARC2B_ARATH^ARC2B_ARATH^Q:1-167,H:1-168^48.21%ID^E:4e-48^RecName: Full=Actin-related protein 2/3 complex subunit 2B;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04045.11^P34-Arc^Arp2/3 complex, 34 kD subunit p34-Arc^72-165^E:0.00029",".",".","ENOG410YKF6^protein 2 3 complex subunit","KEGG:ath:AT2G33385`KO:K05758","GO:0005885^cellular_component^Arp2/3 protein complex`GO:0042995^cellular_component^cell projection`GO:0005737^cellular_component^cytoplasm`GO:0034314^biological_process^Arp2/3 complex-mediated actin nucleation","GO:0030833^biological_process^regulation of actin filament polymerization`GO:0034314^biological_process^Arp2/3 complex-mediated actin nucleation`GO:0005885^cellular_component^Arp2/3 protein complex`GO:0015629^cellular_component^actin cytoskeleton",".","."]
["TRINITY_DN116872_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.29229118142871,"0.000387265486052187","0.00117984030968243","TRINITY_DN116872_c0_g1_i1","7SB1_SOYBN^7SB1_SOYBN^Q:1450-242,H:15-421^31.41%ID^E:3e-40^RecName: Full=Basic 7S globulin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja",".","TRINITY_DN116872_c0_g1_i1.p1","239-1465[-]","7SB1_SOYBN^7SB1_SOYBN^Q:6-408,H:15-421^31.87%ID^E:1e-47^RecName: Full=Basic 7S globulin;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja","PF14543.3^TAXi_N^Xylanase inhibitor N-terminal^38-198^E:2.6e-24`PF14541.3^TAXi_C^Xylanase inhibitor C-terminal^235-395^E:3.2e-50","sigP:1^21^0.919^YES",".","ENOG410XNV7^aspartic","KEGG:gmx:547908","GO:0004190^molecular_function^aspartic-type endopeptidase activity`GO:0042802^molecular_function^identical protein binding`GO:0045735^molecular_function^nutrient reservoir activity`GO:0030163^biological_process^protein catabolic process`GO:0006508^biological_process^proteolysis",".",".","."]
["TRINITY_DN45590_c3_g5","leaves S. abrotanoides","leaves S. yangii",-1.29358818200826,"0.0166702665615449","0.0347947070658626","TRINITY_DN45590_c3_g5_i1","RNZN_ARATH^RNZN_ARATH^Q:925-500,H:139-280^63.38%ID^E:1e-58^RecName: Full=Nuclear ribonuclease Z;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45590_c3_g5_i1.p1","524-925[-]","RNZN_ARATH^RNZN_ARATH^Q:1-133,H:139-271^63.16%ID^E:1e-57^RecName: Full=Nuclear ribonuclease Z;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410ZMQJ^nuclear ribonuclease","KEGG:ath:AT1G74700`KO:K00784","GO:0005634^cellular_component^nucleus`GO:0042781^molecular_function^3'-tRNA processing endoribonuclease activity`GO:0046872^molecular_function^metal ion binding`GO:0042780^biological_process^tRNA 3'-end processing`GO:0034414^biological_process^tRNA 3'-trailer cleavage, endonucleolytic`GO:0008033^biological_process^tRNA processing",".",".","."]
["TRINITY_DN46549_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.31525367730114,{"v":5302025508.41719,"d":"5.30E+09"},"0.000187443259328261","TRINITY_DN46549_c0_g1_i1","PUB42_ARATH^PUB42_ARATH^Q:2123-282,H:366-1032^26.38%ID^E:5e-23^RecName: Full=Putative U-box domain-containing protein 42;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46549_c0_g1_i1.p1","279-2540[-]","PUB44_ARATH^PUB44_ARATH^Q:126-729,H:137-773^25.37%ID^E:3e-37^RecName: Full=U-box domain-containing protein 44;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05804.9^KAP^Kinesin-associated protein (KAP)^244-572^E:7.3e-06",".",".","ENOG410XRTN^U-box domain-containing protein","KEGG:ath:AT1G20780","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0005886^cellular_component^plasma membrane`GO:0016874^molecular_function^ligase activity`GO:0070696^molecular_function^transmembrane receptor protein serine/threonine kinase binding`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0010150^biological_process^leaf senescence`GO:0090359^biological_process^negative regulation of abscisic acid biosynthetic process`GO:0010115^biological_process^regulation of abscisic acid biosynthetic process`GO:0010380^biological_process^regulation of chlorophyll biosynthetic process`GO:0010271^biological_process^regulation of chlorophyll catabolic process",".",".","."]
["TRINITY_DN47641_c1_g4","leaves S. abrotanoides","leaves S. yangii",-1.3157588246741,"0.0185159298712212","0.0382111512667966","TRINITY_DN47641_c1_g4_i1","R1B12_SOLDE^R1B12_SOLDE^Q:3-401,H:972-1104^31.21%ID^E:2e-07^RecName: Full=Putative late blight resistance protein homolog R1B-12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47641_c1_g4_i1.p1","3-650[+]","R1B12_SOLDE^R1B12_SOLDE^Q:1-133,H:972-1104^31.21%ID^E:2e-07^RecName: Full=Putative late blight resistance protein homolog R1B-12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN15221_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.35478815414895,"0.00988141375184378","0.0219616110067007","TRINITY_DN15221_c0_g1_i1","ATL2_ARATH^ATL2_ARATH^Q:546-187,H:92-201^38.21%ID^E:3e-19^RecName: Full=RING-H2 finger protein ATL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN15221_c0_g1_i1.p1","103-825[-]","ATL2_ARATH^ATL2_ARATH^Q:1-213,H:1-201^31.11%ID^E:7e-23^RecName: Full=RING-H2 finger protein ATL2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^117-160^E:1.4e-13`PF17123.2^zf-RING_11^RING-like zinc finger^117-146^E:6.7e-09`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^117-159^E:1.1e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^118-159^E:6.9e-06`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^118-157^E:2.1e-05",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT3G16720","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0006952^biological_process^defense response`GO:0016567^biological_process^protein ubiquitination`GO:0010200^biological_process^response to chitin","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN46820_c1_g3","leaves S. abrotanoides","leaves S. yangii",-1.35587510524092,"0.00658478011370726","0.0153295201749024","TRINITY_DN46820_c1_g3_i3","BH055_ARATH^BH055_ARATH^Q:1255-1695,H:91-246^35.22%ID^E:2e-13^RecName: Full=Transcription factor bHLH55;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46820_c1_g3_i3.p1","1024-1713[+]","BH126_ARATH^BH126_ARATH^Q:66-225,H:47-212^34.91%ID^E:2e-22^RecName: Full=Transcription factor bHLH126;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^62-114^E:9.8e-08",".",".","ENOG41114KF^Transcription factor","KEGG:ath:AT4G25410","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN42565_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.35924940672403,"0.00214151211500623","0.0056152799605185","TRINITY_DN42565_c0_g1_i3","CML22_ARATH^CML22_ARATH^Q:1003-440,H:2-193^46.35%ID^E:3e-42^RecName: Full=Probable calcium-binding protein CML22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`CML22_ARATH^CML22_ARATH^Q:332-255,H:194-219^65.38%ID^E:3e-42^RecName: Full=Probable calcium-binding protein CML22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42565_c0_g1_i3.p1","413-1066[-]","CML22_ARATH^CML22_ARATH^Q:22-209,H:2-193^51.56%ID^E:5e-56^RecName: Full=Probable calcium-binding protein CML22;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13202.3^EF-hand_5^EF hand^79-99^E:0.054`PF13833.3^EF-hand_8^EF-hand domain pair^88-137^E:0.006",".",".","COG5126^Calcium-binding protein","KEGG:ath:AT3G24110`KO:K13448","GO:0005509^molecular_function^calcium ion binding","GO:0005509^molecular_function^calcium ion binding",".","."]
["TRINITY_DN43258_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.36026446962083,"0.0124939541047467","0.0270179120743624","TRINITY_DN43258_c0_g1_i3","CCA21_ORYSJ^CCA21_ORYSJ^Q:266-1672,H:16-489^51.85%ID^E:2e-147^RecName: Full=Cyclin-A2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN43258_c0_g1_i3.p1","215-1675[+]","CCA21_ARATH^CCA21_ARATH^Q:12-486,H:18-441^53.26%ID^E:4e-155^RecName: Full=Cyclin-A2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00134.20^Cyclin_N^Cyclin, N-terminal domain^227-353^E:4.5e-43`PF02984.16^Cyclin_C^Cyclin, C-terminal domain^356-478^E:2.9e-33",".",".","COG5024^g2 mitotic-specific","KEGG:ath:AT5G25380`KO:K06627","GO:0005634^cellular_component^nucleus`GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division","GO:0005634^cellular_component^nucleus",".","."]
["TRINITY_DN42759_c0_g2","leaves S. abrotanoides","leaves S. yangii",-1.36212085044456,{"v":4869347759.31306,"d":"4.87E+09"},"0.000173158873283166","TRINITY_DN42759_c0_g2_i1","PP2B1_ARATH^PP2B1_ARATH^Q:1368-463,H:23-336^41.61%ID^E:8e-82^RecName: Full=F-box protein PP2-B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42759_c0_g2_i1.p1","460-1365[-]","PP2B1_ARATH^PP2B1_ARATH^Q:1-301,H:24-336^41.74%ID^E:6e-84^RecName: Full=F-box protein PP2-B1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00646.30^F-box^F-box domain^10-49^E:0.0074`PF14299.3^PP2^Phloem protein 2^107-297^E:1.2e-53",".",".","ENOG410YD6D^F-box protein","KEGG:ath:AT2G02230","GO:0005634^cellular_component^nucleus`GO:0030246^molecular_function^carbohydrate binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46177_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.37471422136082,"0.0134796094769802","0.0288769201841566","TRINITY_DN46177_c0_g1_i5","BH093_ARATH^BH093_ARATH^Q:934-371,H:155-351^63.45%ID^E:1e-64^RecName: Full=Transcription factor bHLH93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46177_c0_g1_i5.p1","368-1282[-]","BH093_ARATH^BH093_ARATH^Q:117-304,H:155-351^63.45%ID^E:5e-73^RecName: Full=Transcription factor bHLH93;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^142-185^E:1.9e-09",".",".","ENOG410YB4F^Transcription factor","KEGG:ath:AT5G65640","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0007275^biological_process^multicellular organism development`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN44817_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.41573407259031,"0.000483955048894507","0.00144688139978429","TRINITY_DN44817_c0_g1_i1","RBK1_ARATH^RBK1_ARATH^Q:471-1610,H:80-467^60.67%ID^E:1e-163^RecName: Full=Receptor-like cytosolic serine/threonine-protein kinase RBK1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44817_c0_g1_i1.p1","258-1613[+]","RBK1_ARATH^RBK1_ARATH^Q:72-451,H:80-467^60.67%ID^E:1e-172^RecName: Full=Receptor-like cytosolic serine/threonine-protein kinase RBK1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^138-350^E:9.2e-41`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^140-351^E:8.7e-43",".",".","COG0515^Serine Threonine protein kinase","KEGG:ath:AT5G10520","GO:0005737^cellular_component^cytoplasm`GO:0005829^cellular_component^cytosol`GO:0012505^cellular_component^endomembrane system`GO:0016020^cellular_component^membrane`GO:0005634^cellular_component^nucleus`GO:0005524^molecular_function^ATP binding`GO:0051020^molecular_function^GTPase binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0071369^biological_process^cellular response to ethylene stimulus`GO:0009814^biological_process^defense response, incompatible interaction`GO:0009623^biological_process^response to parasitic fungus","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN45645_c2_g1","leaves S. abrotanoides","leaves S. yangii",-1.42050454722846,"0.000783196961935076","0.00224711169444912","TRINITY_DN45645_c2_g1_i1","DTX48_ARATH^DTX48_ARATH^Q:1251-4,H:1-427^71.9%ID^E:9e-159^RecName: Full=Protein DETOXIFICATION 48 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45645_c2_g1_i1.p1","1-1173[-]","DTX48_ARATH^DTX48_ARATH^Q:2-390,H:37-427^74.94%ID^E:0^RecName: Full=Protein DETOXIFICATION 48 {ECO:0000303|PubMed:11739388};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01554.15^MatE^MatE^31-191^E:3.2e-34`PF01554.15^MatE^MatE^252-390^E:7.2e-31",".",".","COG0534^Mate efflux family protein","KEGG:ath:AT1G58340`KO:K03327","GO:0005794^cellular_component^Golgi apparatus`GO:0000139^cellular_component^Golgi membrane`GO:0017119^cellular_component^Golgi transport complex`GO:0016021^cellular_component^integral component of membrane`GO:0005770^cellular_component^late endosome`GO:0031902^cellular_component^late endosome membrane`GO:0043226^cellular_component^organelle`GO:0015297^molecular_function^antiporter activity`GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0022857^molecular_function^transmembrane transporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0015893^biological_process^drug transport`GO:0055072^biological_process^iron ion homeostasis`GO:0003156^biological_process^regulation of organ formation`GO:0009737^biological_process^response to abscisic acid`GO:0009646^biological_process^response to absence of light`GO:0009408^biological_process^response to heat`GO:0009624^biological_process^response to nematode`GO:0006970^biological_process^response to osmotic stress`GO:0010015^biological_process^root morphogenesis`GO:0006810^biological_process^transport","GO:0015238^molecular_function^drug transmembrane transporter activity`GO:0015297^molecular_function^antiporter activity`GO:0006855^biological_process^drug transmembrane transport`GO:0055085^biological_process^transmembrane transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN116951_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.42342859803849,{"v":3361029590.41629,"d":"3.36E+09"},"0.000122625767931844","TRINITY_DN116951_c0_g1_i1","PRPX_HORVU^PRPX_HORVU^Q:263-964,H:1-231^49.79%ID^E:5e-72^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".","TRINITY_DN116951_c0_g1_i1.p1","191-970[+]","PRPX_HORVU^PRPX_HORVU^Q:25-258,H:1-231^49.79%ID^E:2e-74^RecName: Full=Pathogen-related protein;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum",".",".",".","ENOG410YA3P^NA",".","GO:0006952^biological_process^defense response`GO:0009607^biological_process^response to biotic stimulus",".",".","."]
["TRINITY_DN47558_c1_g3","leaves S. abrotanoides","leaves S. yangii",-1.42769958631489,"0.000455576810246494","0.00137012837932419","TRINITY_DN47558_c1_g3_i1","AGD12_ARATH^AGD12_ARATH^Q:1493-681,H:42-324^67.14%ID^E:5e-132^RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47558_c1_g3_i1.p1","645-1370[-]","AGD12_ARATH^AGD12_ARATH^Q:1-241,H:83-335^66.4%ID^E:2e-121^RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00168.27^C2^C2 domain^89-176^E:7.7e-24",".",".","COG5347^domain, ankyrin repeat and PH domain","KEGG:ath:AT4G21160`KO:K12486","GO:0005794^cellular_component^Golgi apparatus`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0005096^molecular_function^GTPase activator activity`GO:0046872^molecular_function^metal ion binding`GO:0005543^molecular_function^phospholipid binding`GO:0006886^biological_process^intracellular protein transport`GO:0043547^biological_process^positive regulation of GTPase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46657_c1_g3","leaves S. abrotanoides","leaves S. yangii",-1.44237639402252,"0.000221085750529665","0.000704304481643442","TRINITY_DN46657_c1_g3_i1","RFS2_ARATH^RFS2_ARATH^Q:108-2309,H:1-757^49.54%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46657_c1_g3_i1.p1","108-2351[+]","RFS2_ARATH^RFS2_ARATH^Q:1-734,H:1-757^49.54%ID^E:0^RecName: Full=Probable galactinol--sucrose galactosyltransferase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05691.9^Raffinose_syn^Raffinose synthase or seed imbibition protein Sip1^9-732^E:4.8e-259",".",".","ENOG410YBU9^raffinose synthase","KEGG:ath:AT3G57520`KO:K06617","GO:0009506^cellular_component^plasmodesma`GO:0052692^molecular_function^raffinose alpha-galactosidase activity`GO:0016757^molecular_function^transferase activity, transferring glycosyl groups`GO:0034484^biological_process^raffinose catabolic process`GO:0080167^biological_process^response to karrikin`GO:0006979^biological_process^response to oxidative stress",".",".","."]
["TRINITY_DN88741_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.47471817935774,"0.0027391268348268","0.00701502560591845","TRINITY_DN88741_c0_g1_i1","NET4A_ARATH^NET4A_ARATH^Q:160-1557,H:41-546^35%ID^E:2e-55^RecName: Full=Protein NETWORKED 4A {ECO:0000303|PubMed:22840520};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN88741_c0_g1_i1.p1","112-1578[+]","NET4A_ARATH^NET4A_ARATH^Q:17-482,H:41-546^36.9%ID^E:3e-67^RecName: Full=Protein NETWORKED 4A {ECO:0000303|PubMed:22840520};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF07765.9^KIP1^KIP1-like protein^17-71^E:1.1e-23",".",".","ENOG410YMAJ^Kinase interacting","KEGG:ath:AT5G58320","GO:0005774^cellular_component^vacuolar membrane","GO:0003779^molecular_function^actin binding",".","."]
["TRINITY_DN48719_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.47840208650851,"0.0114102268160246","0.0249469102010362","TRINITY_DN48719_c0_g1_i1","BEE1_ARATH^BEE1_ARATH^Q:370-699,H:142-251^78.18%ID^E:2e-56^RecName: Full=Transcription factor BEE 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN48719_c0_g1_i1.p1","34-708[+]","BEE3_ARATH^BEE3_ARATH^Q:7-216,H:30-247^52.65%ID^E:8e-60^RecName: Full=Transcription factor BEE 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00010.23^HLH^Helix-loop-helix DNA-binding domain^126-173^E:6.4e-06",".",".","ENOG410YIJY^Transcription factor",".","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated","GO:0046983^molecular_function^protein dimerization activity",".","."]
["TRINITY_DN45531_c1_g1","leaves S. abrotanoides","leaves S. yangii",-1.48183184821752,"0.00774467532305693","0.0177060647295508","TRINITY_DN45531_c1_g1_i7","EDM2_ARATH^EDM2_ARATH^Q:181-1002,H:8-269^39.05%ID^E:2e-47^RecName: Full=Protein ENHANCED DOWNY MILDEW 2 {ECO:0000303|PubMed:23940361};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45531_c1_g1_i7.p1","169-1077[+]","EDM2_ARATH^EDM2_ARATH^Q:5-278,H:8-269^39.05%ID^E:4e-51^RecName: Full=Protein ENHANCED DOWNY MILDEW 2 {ECO:0000303|PubMed:23940361};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YE57^NA","KEGG:ath:AT5G55390","GO:0005634^cellular_component^nucleus`GO:0043565^molecular_function^sequence-specific DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0008270^molecular_function^zinc ion binding`GO:0016568^biological_process^chromatin modification`GO:0050832^biological_process^defense response to fungus`GO:0070829^biological_process^heterochromatin maintenance`GO:0090436^biological_process^leaf pavement cell development`GO:0031937^biological_process^positive regulation of chromatin silencing`GO:0009911^biological_process^positive regulation of flower development`GO:0061087^biological_process^positive regulation of histone H3-K27 methylation`GO:1900111^biological_process^positive regulation of histone H3-K9 dimethylation`GO:0044030^biological_process^regulation of DNA methylation`GO:2000024^biological_process^regulation of leaf development`GO:1900363^biological_process^regulation of mRNA polyadenylation`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0007165^biological_process^signal transduction`GO:0006351^biological_process^transcription, DNA-templated`GO:0010228^biological_process^vegetative to reproductive phase transition of meristem",".",".","."]
["TRINITY_DN46286_c4_g1","leaves S. abrotanoides","leaves S. yangii",-1.48455981085918,{"v":3651043288.37839,"d":"3.65E+09"},"0.000132605873003224","TRINITY_DN46286_c4_g1_i3","RP8L3_ARATH^RP8L3_ARATH^Q:2432-285,H:139-865^30.72%ID^E:1e-58^RecName: Full=Disease resistance RPP8-like protein 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46286_c4_g1_i3.p1","204-2507[-]","DRL7_ARATH^DRL7_ARATH^Q:35-744,H:150-877^32.19%ID^E:2e-85^RecName: Full=Probable disease resistance protein At1g58390;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^62-333^E:2.2e-56`PF13855.3^LRR_8^Leucine rich repeat^472-526^E:1.7e-07",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G58390","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding`GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44602_c2_g1","leaves S. abrotanoides","leaves S. yangii",-1.48509019794985,"0.0112114490691631","0.0245443486861007","TRINITY_DN44602_c2_g1_i1","OST3_ORYSJ^OST3_ORYSJ^Q:12-620,H:66-264^51.72%ID^E:2e-69^RecName: Full=Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN44602_c2_g1_i1.p2","3-620[+]","OST3_ORYSJ^OST3_ORYSJ^Q:4-206,H:66-264^51.72%ID^E:2e-69^RecName: Full=Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF04756.10^OST3_OST6^OST3 / OST6 family, transporter family^2-206^E:5.7e-44",".",".","ENOG410XR1F^tumor suppressor candidate 3","KEGG:osa:4333265`KO:K12669","GO:0005789^cellular_component^endoplasmic reticulum membrane`GO:0016021^cellular_component^integral component of membrane",".",".","."]
["TRINITY_DN46213_c1_g6","leaves S. abrotanoides","leaves S. yangii",-1.49843255033111,"0.00102605846873942","0.00287349158820992","TRINITY_DN46213_c1_g6_i1","RPP13_ARATH^RPP13_ARATH^Q:8-304,H:178-284^40.19%ID^E:1e-18^RecName: Full=Disease resistance protein RPP13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46213_c1_g6_i1.p1","2-304[+]","RPP13_ARATH^RPP13_ARATH^Q:3-101,H:178-284^40.19%ID^E:1e-18^RecName: Full=Disease resistance protein RPP13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^2-98^E:4.9e-26`PF13401.3^AAA_22^AAA domain^8-96^E:4.4e-07",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G46530","GO:0005737^cellular_component^cytoplasm`GO:0005886^cellular_component^plasma membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009814^biological_process^defense response, incompatible interaction`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN45716_c5_g3","leaves S. abrotanoides","leaves S. yangii",-1.5088928388914,"0.00329430606336873","0.00828580573221563","TRINITY_DN45716_c5_g3_i1","VINSY_RAUSE^VINSY_RAUSE^Q:55-1236,H:11-404^39.31%ID^E:3e-83^RecName: Full=Vinorine synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Rauvolfiinae; Rauvolfia",".","TRINITY_DN45716_c5_g3_i1.p1","31-1281[+]","VINSY_RAUSE^VINSY_RAUSE^Q:9-402,H:11-404^39.31%ID^E:9e-85^RecName: Full=Vinorine synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Rauvolfiinae; Rauvolfia","PF02458.12^Transferase^Transferase family^6-407^E:9.5e-80",".",".",".","KEGG:ag:CAD89104`KO:K12694","GO:0050636^molecular_function^vinorine synthase activity`GO:0009820^biological_process^alkaloid metabolic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN45335_c0_g3","leaves S. abrotanoides","leaves S. yangii",-1.51306872893943,"0.0132090320178764","0.0283759825464437","TRINITY_DN45335_c0_g3_i10","FIPS5_ARATH^FIPS5_ARATH^Q:3202-2462,H:240-485^55.86%ID^E:5e-74^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FIPS5_ARATH^FIPS5_ARATH^Q:1729-533,H:780-1178^34.43%ID^E:1e-35^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45335_c0_g3_i10.p1","485-3265[-]","FIPS5_ARATH^FIPS5_ARATH^Q:2-268,H:224-485^55.8%ID^E:1e-85^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FIPS5_ARATH^FIPS5_ARATH^Q:513-911,H:780-1178^34.43%ID^E:2e-36^RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05182.10^Fip1^Fip1 motif^127-168^E:1.7e-19",".",".","COG5213^mRNA processing","KEGG:ath:AT5G58040","GO:0005634^cellular_component^nucleus`GO:0042802^molecular_function^identical protein binding`GO:0003723^molecular_function^RNA binding`GO:0006397^biological_process^mRNA processing",".",".","."]
["TRINITY_DN45443_c4_g1","leaves S. abrotanoides","leaves S. yangii",-1.51617151111377,"0.0120049856824852","0.0260822748204383","TRINITY_DN45443_c4_g1_i1","AB15B_ARATH^AB15B_ARATH^Q:3977-321,H:23-1236^72.81%ID^E:0^RecName: Full=ABC transporter B family member 15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45443_c4_g1_i1.p1","288-4058[-]","AB15B_ARATH^AB15B_ARATH^Q:6-1246,H:1-1236^72%ID^E:0^RecName: Full=ABC transporter B family member 15;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00664.20^ABC_membrane^ABC transporter transmembrane region^41-310^E:7.6e-45`PF00005.24^ABC_tran^ABC transporter^384-532^E:7.4e-33`PF00664.20^ABC_membrane^ABC transporter transmembrane region^685-954^E:3.7e-51`PF00005.24^ABC_tran^ABC transporter^1025-1174^E:1.7e-33",".",".","COG1132^(ABC) transporter","KEGG:ath:AT3G28345`KO:K05658","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0006810^biological_process^transport`GO:0055085^biological_process^transmembrane transport`GO:0016021^cellular_component^integral component of membrane`GO:0016887^molecular_function^ATPase activity",".","."]
["TRINITY_DN34763_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.52467596733015,"0.000227504208551121","0.000722742433176555","TRINITY_DN34763_c0_g1_i1","CKX3_ARATH^CKX3_ARATH^Q:1062-109,H:203-523^50.61%ID^E:4e-106^RecName: Full=Cytokinin dehydrogenase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN34763_c0_g1_i1.p1","100-1098[-]","CKX3_ARATH^CKX3_ARATH^Q:13-330,H:203-523^50.61%ID^E:1e-106^RecName: Full=Cytokinin dehydrogenase 3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF09265.7^Cytokin-bind^Cytokinin dehydrogenase 1, FAD and cytokinin binding^54-324^E:2.3e-96",".",".","COG0277^FAD linked oxidase domain protein","KEGG:ath:AT5G56970`KO:K00279","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005773^cellular_component^vacuole`GO:0019139^molecular_function^cytokinin dehydrogenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors`GO:0008131^molecular_function^primary amine oxidase activity`GO:0009823^biological_process^cytokinin catabolic process","GO:0019139^molecular_function^cytokinin dehydrogenase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0009690^biological_process^cytokinin metabolic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN117416_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.52806179892338,{"v":411269588.98886,"d":"4.11E+08"},"0.000148261325010653","TRINITY_DN117416_c0_g1_i1","OLEO1_ARATH^OLEO1_ARATH^Q:617-258,H:40-159^60%ID^E:9e-16^RecName: Full=Oleosin 18.5 kDa;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN117416_c0_g1_i1.p1","243-662[-]","OLEO1_ARATH^OLEO1_ARATH^Q:16-135,H:40-159^60%ID^E:3e-37^RecName: Full=Oleosin 18.5 kDa;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01277.14^Oleosin^Oleosin^17-129^E:1.6e-44",".",".","ENOG410YP7Y^May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth","KEGG:ath:AT4G25140","GO:0005576^cellular_component^extracellular region`GO:0016021^cellular_component^integral component of membrane`GO:0012511^cellular_component^monolayer-surrounded lipid storage body`GO:0019915^biological_process^lipid storage`GO:0050826^biological_process^response to freezing`GO:0009845^biological_process^seed germination`GO:0010344^biological_process^seed oilbody biogenesis`GO:0019953^biological_process^sexual reproduction","GO:0012511^cellular_component^monolayer-surrounded lipid storage body`GO:0016021^cellular_component^integral component of membrane",".","."]
["TRINITY_DN46590_c4_g2","leaves S. abrotanoides","leaves S. yangii",-1.53485330635313,"0.000111625386036284","0.0003750819684497","TRINITY_DN46590_c4_g2_i1","CBDAS_CANSA^CBDAS_CANSA^Q:6-677,H:312-538^48.91%ID^E:1e-71^RecName: Full=Cannabidiolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis",".","TRINITY_DN46590_c4_g2_i1.p1","3-686[+]","CBDAS_CANSA^CBDAS_CANSA^Q:2-225,H:312-538^48.91%ID^E:9e-74^RecName: Full=Cannabidiolic acid synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis","PF08031.9^BBE^Berberine and berberine like^166-224^E:1.4e-22",".",".",".",".","GO:0048046^cellular_component^apoplast`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0016614^molecular_function^oxidoreductase activity, acting on CH-OH group of donors","GO:0016491^molecular_function^oxidoreductase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN46547_c1_g2","leaves S. abrotanoides","leaves S. yangii",-1.54241560238905,"0.000231365277608572","0.000732976510206468","TRINITY_DN46547_c1_g2_i1","AB25G_ARATH^AB25G_ARATH^Q:2164-284,H:36-661^62.97%ID^E:0^RecName: Full=ABC transporter G family member 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46547_c1_g2_i1.p1","278-2266[-]","AB25G_ARATH^AB25G_ARATH^Q:35-661,H:36-661^63.44%ID^E:0^RecName: Full=ABC transporter G family member 25;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00005.24^ABC_tran^ABC transporter^88-240^E:1.3e-27`PF01061.21^ABC2_membrane^ABC-2 type transporter^393-598^E:3.7e-36`PF12698.4^ABC2_membrane_3^ABC-2 family transporter protein^443-654^E:4.1e-12",".",".","COG1131^(ABC) transporter","KEGG:ath:AT1G71960","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0080168^biological_process^abscisic acid transport`GO:0009737^biological_process^response to abscisic acid`GO:0055085^biological_process^transmembrane transport","GO:0005524^molecular_function^ATP binding`GO:0016887^molecular_function^ATPase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47296_c3_g1","leaves S. abrotanoides","leaves S. yangii",-1.55310813654263,"0.00506397726144803","0.0121431606851703","TRINITY_DN47296_c3_g1_i1","FATB_CUPHO^FATB_CUPHO^Q:214-360,H:116-165^52%ID^E:4e-10^RecName: Full=Palmitoyl-acyl carrier protein thioesterase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Cuphea`FATB_CUPHO^FATB_CUPHO^Q:467-520,H:164-181^72.22%ID^E:4e-10^RecName: Full=Palmitoyl-acyl carrier protein thioesterase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Cuphea",".","TRINITY_DN47296_c3_g1_i1.p1","1-519[+]","FATB_CUPHO^FATB_CUPHO^Q:72-120,H:116-165^52%ID^E:7e-08^RecName: Full=Palmitoyl-acyl carrier protein thioesterase, chloroplastic;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Cuphea",".",".",".",".",".","GO:0009507^cellular_component^chloroplast`GO:0016790^molecular_function^thiolester hydrolase activity`GO:0006633^biological_process^fatty acid biosynthetic process",".",".","."]
["TRINITY_DN43562_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.58167934855344,"0.000514735587826754","0.00153008227840816","TRINITY_DN43562_c0_g1_i2","PGML4_ARATH^PGML4_ARATH^Q:931-455,H:4-162^58.49%ID^E:8e-61^RecName: Full=Phosphoglycerate mutase-like protein 4 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`PGML4_ARATH^PGML4_ARATH^Q:413-243,H:157-215^48.33%ID^E:8e-61^RecName: Full=Phosphoglycerate mutase-like protein 4 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43562_c0_g1_i2.p1","440-1090[-]","PGML4_ARATH^PGML4_ARATH^Q:54-212,H:4-162^58.49%ID^E:5e-61^RecName: Full=Phosphoglycerate mutase-like protein 4 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00300.19^His_Phos_1^Histidine phosphatase superfamily (branch 1)^66-208^E:1e-43",".",".","COG0406^Phosphoglycerate mutase","KEGG:ath:AT3G50520`KO:K15634","GO:0003824^molecular_function^catalytic activity",".",".","."]
["TRINITY_DN47687_c1_g2","leaves S. abrotanoides","leaves S. yangii",-1.5940047016894,"0.000102395029340326","0.000345612985406335","TRINITY_DN47687_c1_g2_i1","LPXC5_ARATH^LPXC5_ARATH^Q:511-936,H:183-324^61.27%ID^E:2e-85^RecName: Full=Probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`LPXC5_ARATH^LPXC5_ARATH^Q:116-529,H:21-157^57.25%ID^E:2e-85^RecName: Full=Probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47687_c1_g2_i1.p2","499-972[+]","LPXC5_ARATH^LPXC5_ARATH^Q:9-146,H:187-324^63.04%ID^E:3e-59^RecName: Full=Probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03331.10^LpxC^UDP-3-O-acyl N-acetylglycosamine deacetylase^6-146^E:9.9e-45",".",".","COG0774^involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)","KEGG:ath:AT1G25054`KEGG:ath:AT1G25145`KO:K02535","GO:0005739^cellular_component^mitochondrion`GO:0008759^molecular_function^UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity`GO:0009245^biological_process^lipid A biosynthetic process`GO:2001289^biological_process^lipid X metabolic process","GO:0008759^molecular_function^UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity`GO:0009245^biological_process^lipid A biosynthetic process",".","."]
["TRINITY_DN45298_c0_g5","leaves S. abrotanoides","leaves S. yangii",-1.59448405831107,"0.00844821084627948","0.0190801102548376","TRINITY_DN45298_c0_g5_i1","R1B13_SOLDE^R1B13_SOLDE^Q:15-317,H:994-1098^35.24%ID^E:5e-07^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN45298_c0_g5_i1.p1","3-317[+]","R1B13_SOLDE^R1B13_SOLDE^Q:5-105,H:994-1098^35.24%ID^E:4e-07^RecName: Full=Putative late blight resistance protein homolog R1B-13;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response",".",".","."]
["TRINITY_DN43758_c2_g2","leaves S. abrotanoides","leaves S. yangii",-1.61245513360736,"0.0011869826761458","0.00328236738511539","TRINITY_DN43758_c2_g2_i2","AB16G_ARATH^AB16G_ARATH^Q:307-714,H:73-216^52.08%ID^E:1e-75^RecName: Full=ABC transporter G family member 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB16G_ARATH^AB16G_ARATH^Q:786-1058,H:217-307^64.84%ID^E:1e-75^RecName: Full=ABC transporter G family member 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB16G_ARATH^AB16G_ARATH^Q:1151-1468,H:305-419^32.77%ID^E:1e-75^RecName: Full=ABC transporter G family member 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB16G_ARATH^AB16G_ARATH^Q:1880-2800,H:424-736^36.83%ID^E:3e-54^RecName: Full=ABC transporter G family member 16;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN43758_c2_g2_i2.p1","1061-2803[+]","AB2G_ARATH^AB2G_ARATH^Q:272-580,H:441-755^36.91%ID^E:6e-58^RecName: Full=ABC transporter G family member 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`AB2G_ARATH^AB2G_ARATH^Q:31-88,H:331-388^44.83%ID^E:2e-08^RecName: Full=ABC transporter G family member 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01061.21^ABC2_membrane^ABC-2 type transporter^282-488^E:2.4e-33",".",".","COG1131^(ABC) transporter","KEGG:ath:AT2G37360","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0042626^molecular_function^ATPase activity, coupled to transmembrane movement of substances`GO:0010345^biological_process^suberin biosynthetic process`GO:0055085^biological_process^transmembrane transport","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN42341_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.61996738957224,"0.000184283614921874","0.000595251658701808","TRINITY_DN42341_c0_g1_i9","CCJ18_ARATH^CCJ18_ARATH^Q:79-408,H:119-228^60.91%ID^E:1e-36^RecName: Full=Cyclin-J18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42341_c0_g1_i9.p1","103-447[+]","CCJ18_ARATH^CCJ18_ARATH^Q:3-103,H:129-229^60.4%ID^E:4e-34^RecName: Full=Cyclin-J18;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YA93^cell division","KEGG:ath:AT2G01905","GO:0007049^biological_process^cell cycle`GO:0051301^biological_process^cell division`GO:0051726^biological_process^regulation of cell cycle",".",".","."]
["TRINITY_DN44180_c2_g3","leaves S. abrotanoides","leaves S. yangii",-1.62190495202481,"0.00121298136204223","0.00334703537917976","TRINITY_DN44180_c2_g3_i2","UGT8_CATRO^UGT8_CATRO^Q:753-220,H:304-481^78.09%ID^E:4e-99^RecName: Full=7-deoxyloganetic acid glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus",".","TRINITY_DN44180_c2_g3_i2.p1","214-753[-]","UGT8_CATRO^UGT8_CATRO^Q:1-178,H:304-481^78.09%ID^E:2e-100^RecName: Full=7-deoxyloganetic acid glucosyltransferase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus","PF00201.15^UDPGT^UDP-glucoronosyl and UDP-glucosyl transferase^4-135^E:5.8e-25",".",".",".",".","GO:0035251^molecular_function^UDP-glucosyltransferase activity`GO:1900994^biological_process^(-)-secologanin biosynthetic process","GO:0016758^molecular_function^transferase activity, transferring hexosyl groups`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN47579_c1_g3","leaves S. abrotanoides","leaves S. yangii",-1.63289135615006,"0.00139879725981411","0.00380432319949943","TRINITY_DN47579_c1_g3_i1","RGA4_SOLBU^RGA4_SOLBU^Q:635-6,H:354-553^34.88%ID^E:4e-23^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47579_c1_g3_i1.p1","3-635[-]","RGA4_SOLBU^RGA4_SOLBU^Q:1-210,H:354-553^34.88%ID^E:4e-23^RecName: Full=Putative disease resistance protein RGA4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^3-84^E:4.8e-14",".",".",".",".","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN47341_c4_g5","leaves S. abrotanoides","leaves S. yangii",-1.67818097326989,"0.00623443579674521","0.0146044760665229","TRINITY_DN47341_c4_g5_i1","R1B14_SOLDE^R1B14_SOLDE^Q:11-541,H:539-715^33.33%ID^E:4e-25^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN47341_c4_g5_i1.p1","2-556[+]","R1B14_SOLDE^R1B14_SOLDE^Q:4-180,H:539-715^33.33%ID^E:4e-25^RecName: Full=Putative late blight resistance protein homolog R1B-14;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^16-180^E:5.3e-34",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN41173_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.68410187452426,{"v":3837974903.55623,"d":"3.84E+09"},"0.000138771281218919","TRINITY_DN41173_c0_g1_i5","TLP5_ORYSJ^TLP5_ORYSJ^Q:1585-365,H:1-428^62.79%ID^E:1e-166^RecName: Full=Tubby-like F-box protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN41173_c0_g1_i5.p1","362-1585[-]","TLP5_ORYSJ^TLP5_ORYSJ^Q:1-407,H:1-428^63.26%ID^E:0^RecName: Full=Tubby-like F-box protein 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00646.30^F-box^F-box domain^53-104^E:9.8e-08`PF12937.4^F-box-like^F-box-like^53-95^E:1.5e-05`PF01167.15^Tub^Tub family^117-401^E:1.6e-91",".",".","ENOG410XQFT^tubby like protein","KEGG:osa:4330460","GO:0005929^cellular_component^cilium`GO:0035091^molecular_function^phosphatidylinositol binding`GO:0061512^biological_process^protein localization to cilium","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN38668_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.69218540498676,"0.000121824870214667","0.000406967585770814","TRINITY_DN38668_c0_g1_i2","NLP9_ARATH^NLP9_ARATH^Q:3095-1296,H:21-615^49.26%ID^E:5e-176^RecName: Full=Protein NLP9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38668_c0_g1_i2.p1","426-3161[-]","NLP9_ARATH^NLP9_ARATH^Q:23-902,H:21-873^44.28%ID^E:0^RecName: Full=Protein NLP9;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02042.12^RWP-RK^RWP-RK domain^542-590^E:8.9e-26`PF00564.21^PB1^PB1 domain^823-901^E:4.1e-13",".",".","ENOG410YA7W^RWP-RK domain-containing protein","KEGG:ath:AT3G59580","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006351^biological_process^transcription, DNA-templated","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN38450_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.70260142420619,"0.00011174975244879","0.000375441924058007","TRINITY_DN38450_c0_g1_i2","NEK1_ARATH^NEK1_ARATH^Q:1476-517,H:1-319^76.95%ID^E:7e-176^RecName: Full=Serine/threonine-protein kinase Nek1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN38450_c0_g1_i2.p1","208-1476[-]","NEK1_ARATH^NEK1_ARATH^Q:1-386,H:1-375^68.22%ID^E:0^RecName: Full=Serine/threonine-protein kinase Nek1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^4-257^E:4.1e-63`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^6-254^E:3.8e-40",".",".","ENOG410Y7JF^NIMA-related kinase","KEGG:ath:AT1G54510`KO:K08857","GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0006468^biological_process^protein phosphorylation","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN29107_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.71307658182301,"0.000893624978119769","0.00253191805772022","TRINITY_DN29107_c0_g1_i1","ARR3_ARATH^ARR3_ARATH^Q:661-263,H:25-158^76.12%ID^E:3e-65^RecName: Full=Two-component response regulator ARR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN29107_c0_g1_i1.p1","233-682[-]","ARR3_ARATH^ARR3_ARATH^Q:8-142,H:25-160^75%ID^E:2e-67^RecName: Full=Two-component response regulator ARR3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00072.21^Response_reg^Response regulator receiver domain^18-136^E:1.5e-23",".",".","COG5641^Transcription factor","KEGG:ath:AT1G59940`KO:K14492","GO:0005737^cellular_component^cytoplasm`GO:0005634^cellular_component^nucleus`GO:0000156^molecular_function^phosphorelay response regulator activity`GO:0007623^biological_process^circadian rhythm`GO:0009736^biological_process^cytokinin-activated signaling pathway`GO:0000160^biological_process^phosphorelay signal transduction system`GO:0010161^biological_process^red light signaling pathway`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0009735^biological_process^response to cytokinin`GO:0010114^biological_process^response to red light`GO:0006351^biological_process^transcription, DNA-templated","GO:0000160^biological_process^phosphorelay signal transduction system",".","."]
["TRINITY_DN560_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.71482496829436,"0.00433647035216813","0.0105795300221971","TRINITY_DN560_c0_g1_i1","TTL4_ARATH^TTL4_ARATH^Q:6-338,H:459-560^35.14%ID^E:8e-09^RecName: Full=TPR repeat-containing thioredoxin TTL4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN560_c0_g1_i1.p1","108-806[+]","TTL4_ARATH^TTL4_ARATH^Q:2-77,H:490-560^38.16%ID^E:3e-07^RecName: Full=TPR repeat-containing thioredoxin TTL4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00564.21^PB1^PB1 domain^170-230^E:1.3e-12",".",".","ENOG41108CD^Thioredoxin","KEGG:ath:AT3G58620","GO:0005623^cellular_component^cell`GO:0045454^biological_process^cell redox homeostasis`GO:0006970^biological_process^response to osmotic stress","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44384_c4_g7","leaves S. abrotanoides","leaves S. yangii",-1.74469894032669,"0.00047676841843112","0.00142696296122601","TRINITY_DN44384_c4_g7_i1","BXL2_ARATH^BXL2_ARATH^Q:443-2683,H:27-768^74.3%ID^E:0^RecName: Full=Probable beta-D-xylosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44384_c4_g7_i1.p1","392-2686[+]","BXL2_ARATH^BXL2_ARATH^Q:1-764,H:6-768^72.92%ID^E:0^RecName: Full=Probable beta-D-xylosidase 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00933.18^Glyco_hydro_3^Glycosyl hydrolase family 3 N terminal domain^102-341^E:7.9e-37`PF01915.19^Glyco_hydro_3_C^Glycosyl hydrolase family 3 C-terminal domain^388-618^E:3.8e-53`PF14310.3^Fn3-like^Fibronectin type III-like domain^684-747^E:8.1e-11","sigP:1^17^0.883^YES",".","COG1472^hydrolase family 3","KEGG:ath:AT1G02640","GO:0009505^cellular_component^plant-type cell wall`GO:0005578^cellular_component^proteinaceous extracellular matrix`GO:0046556^molecular_function^alpha-L-arabinofuranosidase activity`GO:0009044^molecular_function^xylan 1,4-beta-xylosidase activity`GO:0031222^biological_process^arabinan catabolic process`GO:0045493^biological_process^xylan catabolic process","GO:0004553^molecular_function^hydrolase activity, hydrolyzing O-glycosyl compounds`GO:0005975^biological_process^carbohydrate metabolic process",".","."]
["TRINITY_DN60088_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.749666721643,"0.000231843996260971","0.00073438626339633","TRINITY_DN60088_c0_g1_i1","SOT5_ARATH^SOT5_ARATH^Q:1064-195,H:34-323^42.03%ID^E:8e-68^RecName: Full=Cytosolic sulfotransferase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN60088_c0_g1_i1.p1","186-1151[-]","SOT5_ARATH^SOT5_ARATH^Q:30-319,H:34-323^42.03%ID^E:2e-71^RecName: Full=Cytosolic sulfotransferase 5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00685.24^Sulfotransfer_1^Sulfotransferase domain^55-315^E:1.8e-56`PF13469.3^Sulfotransfer_3^Sulfotransferase family^145-239^E:4.5e-06",".",".","ENOG4111H56^Sulfotransferase","KEGG:ath:AT3G45070","GO:0005737^cellular_component^cytoplasm`GO:1990135^molecular_function^flavonoid sulfotransferase activity`GO:0008146^molecular_function^sulfotransferase activity`GO:0009812^biological_process^flavonoid metabolic process","GO:0008146^molecular_function^sulfotransferase activity",".","."]
["TRINITY_DN118602_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.75043532254189,{"v":7831002499.22929,"d":"7.83E+09"},"0.000269414201956421","TRINITY_DN118602_c0_g1_i1","PTR37_ARATH^PTR37_ARATH^Q:1802-174,H:1-552^50.44%ID^E:3e-165^RecName: Full=Protein NRT1/ PTR FAMILY 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN118602_c0_g1_i1.p1","165-1814[-]","PTR37_ARATH^PTR37_ARATH^Q:5-547,H:1-552^50.44%ID^E:0^RecName: Full=Protein NRT1/ PTR FAMILY 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^104-495^E:1.3e-58",".",".","COG3104^transporter","KEGG:ath:AT3G45650","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0010542^molecular_function^nitrate efflux transmembrane transporter activity`GO:0042128^biological_process^nitrate assimilation`GO:0015706^biological_process^nitrate transport`GO:0010447^biological_process^response to acidic pH","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45123_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.7540585368167,"0.000125773578393858","0.000418489287278096","TRINITY_DN45123_c0_g1_i2","Y2168_ARATH^Y2168_ARATH^Q:1523-933,H:98-292^32.49%ID^E:2e-22^RecName: Full=Ankyrin repeat-containing protein At2g01680;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45123_c0_g1_i2.p1","840-1649[-]","Y2168_ARATH^Y2168_ARATH^Q:43-239,H:98-292^32.49%ID^E:9e-26^RecName: Full=Ankyrin repeat-containing protein At2g01680;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF12796.4^Ank_2^Ankyrin repeats (3 copies)^43-127^E:3.3e-11`PF13637.3^Ank_4^Ankyrin repeats (many copies)^74-124^E:2.9e-09`PF00023.27^Ank^Ankyrin repeat^106-130^E:0.023`PF12796.4^Ank_2^Ankyrin repeats (3 copies)^126-206^E:7.8e-09`PF13637.3^Ank_4^Ankyrin repeats (many copies)^143-197^E:4.7e-08`PF13857.3^Ank_5^Ankyrin repeats (many copies)^169-217^E:3e-06`PF13606.3^Ank_3^Ankyrin repeat^176-205^E:0.002`PF00023.27^Ank^Ankyrin repeat^176-208^E:0.0012",".",".","COG0666^Ankyrin Repeat","KEGG:ath:AT2G01680","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN47133_c0_g9","leaves S. abrotanoides","leaves S. yangii",-1.77709493685947,"0.000137319796494455","0.000454131416900099","TRINITY_DN47133_c0_g9_i1","RLP12_ARATH^RLP12_ARATH^Q:1-708,H:564-799^38.43%ID^E:1e-25^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:289-549,H:139-225^54.02%ID^E:3e-09^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:295-621,H:165-279^40%ID^E:8e-08^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47133_c0_g9_i1.p1","1-822[+]","RLP12_ARATH^RLP12_ARATH^Q:1-270,H:564-832^39.13%ID^E:1e-44^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:91-183,H:133-225^52.69%ID^E:1e-17^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:99-207,H:165-279^40%ID^E:2e-12^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:91-189,H:181-283^40.78%ID^E:7e-11^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:29-194,H:135-306^31.32%ID^E:8e-10^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:1-183,H:326-535^28.77%ID^E:3e-08^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2-193,H:279-439^26.96%ID^E:3e-08^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:110-183,H:104-177^44.59%ID^E:1e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`RLP12_ARATH^RLP12_ARATH^Q:2-183,H:159-321^26.37%ID^E:5e-06^RecName: Full=Receptor-like protein 12;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13855.3^LRR_8^Leucine rich repeat^95-152^E:6.2e-09`PF13516.3^LRR_6^Leucine Rich repeat^115-129^E:1.3`PF00560.30^LRR_1^Leucine Rich Repeat^117-138^E:0.033`PF00560.30^LRR_1^Leucine Rich Repeat^142-160^E:0.82`PF13516.3^LRR_6^Leucine Rich repeat^142-154^E:0.28",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT1G71400","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN9428_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.7795572961538,{"v":3685239939.05297,"d":"3.69E+09"},"0.000133715071542975","TRINITY_DN9428_c0_g1_i1","NIP21_MAIZE^NIP21_MAIZE^Q:442-2,H:45-191^70.07%ID^E:3e-70^RecName: Full=Aquaporin NIP2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea",".","TRINITY_DN9428_c0_g1_i1.p1","2-442[-]","NIP21_MAIZE^NIP21_MAIZE^Q:1-147,H:45-191^70.07%ID^E:3e-70^RecName: Full=Aquaporin NIP2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea","PF00230.17^MIP^Major intrinsic protein^1-144^E:6.4e-33",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:zma:542643`KO:K09874","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0015840^biological_process^urea transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN47730_c3_g4","leaves S. abrotanoides","leaves S. yangii",-1.80308815839009,"0.000909503861658338","0.00257422814035469","TRINITY_DN47730_c3_g4_i1","R13L2_ARATH^R13L2_ARATH^Q:23-358,H:245-361^33.61%ID^E:3e-11^RecName: Full=Putative disease resistance RPP13-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47730_c3_g4_i1.p1","2-478[+]","R13L2_ARATH^R13L2_ARATH^Q:8-142,H:245-382^31.69%ID^E:5e-13^RecName: Full=Putative disease resistance RPP13-like protein 2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00931.19^NB-ARC^NB-ARC domain^9-144^E:3e-23",".",".","COG4886^leucine Rich Repeat","KEGG:ath:AT3G46710","GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0006952^biological_process^defense response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN21982_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.82174099789266,"0.000379104540247544","0.00115708189786235","TRINITY_DN21982_c0_g1_i1","GDL28_ARATH^GDL28_ARATH^Q:3-797,H:48-317^27.46%ID^E:2e-23^RecName: Full=GDSL esterase/lipase At1g71250;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN21982_c0_g1_i1.p1","3-827[+]","GDL28_ARATH^GDL28_ARATH^Q:1-265,H:48-317^27.97%ID^E:1e-24^RecName: Full=GDSL esterase/lipase At1g71250;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00657.19^Lipase_GDSL^GDSL-like Lipase/Acylhydrolase^110-232^E:7.9e-07",".",".","ENOG4110AT7^GDSL esterase lipase","KEGG:ath:AT1G71250","GO:0005576^cellular_component^extracellular region`GO:0016298^molecular_function^lipase activity`GO:0016042^biological_process^lipid catabolic process","GO:0016788^molecular_function^hydrolase activity, acting on ester bonds",".","."]
["TRINITY_DN39586_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.82296782341282,"0.00131102161671961","0.00359207055271837","TRINITY_DN39586_c0_g1_i2","NIP61_ARATH^NIP61_ARATH^Q:165-1061,H:8-305^74.5%ID^E:7e-108^RecName: Full=Aquaporin NIP6-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN39586_c0_g1_i2.p1","141-1064[+]","NIP61_ARATH^NIP61_ARATH^Q:9-307,H:8-305^74.92%ID^E:7e-153^RecName: Full=Aquaporin NIP6-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00230.17^MIP^Major intrinsic protein^75-283^E:4.7e-51",".",".","COG0580^Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)","KEGG:ath:AT1G80760`KO:K09874","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0046715^molecular_function^borate transmembrane transporter activity`GO:0015254^molecular_function^glycerol channel activity`GO:0015168^molecular_function^glycerol transmembrane transporter activity`GO:0015204^molecular_function^urea transmembrane transporter activity`GO:0015250^molecular_function^water channel activity`GO:0035445^biological_process^borate transmembrane transport`GO:0046713^biological_process^borate transport`GO:0080029^biological_process^cellular response to boron-containing substance levels`GO:0015793^biological_process^glycerol transport`GO:0071918^biological_process^urea transmembrane transport`GO:0006833^biological_process^water transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN44513_c2_g3","leaves S. abrotanoides","leaves S. yangii",-1.84595932840088,"0.0018743873730423","0.0049693060587633","TRINITY_DN44513_c2_g3_i4","FDM1_ARATH^FDM1_ARATH^Q:998-1534,H:439-622^44.62%ID^E:2e-40^RecName: Full=Factor of DNA methylation 1 {ECO:0000303|PubMed:22302148};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44513_c2_g3_i4.p1","587-2545[+]","FDM1_ARATH^FDM1_ARATH^Q:138-316,H:439-622^44.62%ID^E:3e-41^RecName: Full=Factor of DNA methylation 1 {ECO:0000303|PubMed:22302148};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03470.11^zf-XS^XS zinc finger domain^53-94^E:1.6e-05`PF03469.11^XH^XH domain^195-322^E:1.7e-43`PF02042.12^RWP-RK^RWP-RK domain^534-580^E:6.5e-19",".",".","ENOG410YGHF^XH XS domain-containing protein","KEGG:ath:AT1G15910","GO:0005655^cellular_component^nucleolar ribonuclease P complex`GO:0009506^cellular_component^plasmodesma`GO:0003677^molecular_function^DNA binding`GO:0003725^molecular_function^double-stranded RNA binding`GO:0043621^molecular_function^protein self-association`GO:0004526^molecular_function^ribonuclease P activity`GO:0003723^molecular_function^RNA binding`GO:0090502^biological_process^RNA phosphodiester bond hydrolysis, endonucleolytic`GO:0080188^biological_process^RNA-directed DNA methylation","GO:0031047^biological_process^gene silencing by RNA",".","."]
["TRINITY_DN36049_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.86250268168634,"0.000604610885959726","0.0017711284045321","TRINITY_DN36049_c0_g1_i1","NRAM5_ORYSJ^NRAM5_ORYSJ^Q:192-1721,H:24-538^75.53%ID^E:0^RecName: Full=Metal transporter Nramp5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN36049_c0_g1_i1.p1","93-1724[+]","NRAM5_ORYSJ^NRAM5_ORYSJ^Q:34-543,H:24-538^75.53%ID^E:0^RecName: Full=Metal transporter Nramp5;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF01566.15^Nramp^Natural resistance-associated macrophage protein^71-432^E:3.5e-118",".",".","COG1914^H( )-stimulated, divalent metal cation uptake system (By similarity)","KEGG:osa:4342859","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0006811^biological_process^ion transport`GO:0055072^biological_process^iron ion homeostasis","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46386_c0_g4","leaves S. abrotanoides","leaves S. yangii",-1.86853632601801,{"v":3752847488.78565,"d":"3.75E+09"},"0.000135918997373285","TRINITY_DN46386_c0_g4_i1","Y3475_ARATH^Y3475_ARATH^Q:237-521,H:24-117^48.42%ID^E:4e-19^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN46386_c0_g4_i1.p1","138-581[+]","Y3475_ARATH^Y3475_ARATH^Q:34-142,H:24-131^46.79%ID^E:1e-22^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`Y3475_ARATH^Y3475_ARATH^Q:89-147,H:150-208^38.98%ID^E:1e-06^RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^33-73^E:7.3e-13`PF00560.30^LRR_1^Leucine Rich Repeat^127-144^E:0.11","sigP:1^28^0.835^YES",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT3G47570","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN44912_c1_g1","leaves S. abrotanoides","leaves S. yangii",-1.88034401199419,"0.00095141182601424","0.00268320818808056","TRINITY_DN44912_c1_g1_i1","GGLO6_ARATH^GGLO6_ARATH^Q:1-1089,H:230-591^64.19%ID^E:1e-176^RecName: Full=Probable L-gulonolactone oxidase 6 {ECO:0000303|PubMed:20622436};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44912_c1_g1_i1.p1","1-1113[+]","GGLO6_ARATH^GGLO6_ARATH^Q:1-363,H:230-591^64.19%ID^E:2e-177^RecName: Full=Probable L-gulonolactone oxidase 6 {ECO:0000303|PubMed:20622436};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF04030.11^ALO^D-arabinono-1,4-lactone oxidase^173-312^E:1.4e-07",".",".","COG0277^FAD linked oxidase domain protein","KEGG:ath:AT2G46760","GO:0016020^cellular_component^membrane`GO:0003885^molecular_function^D-arabinono-1,4-lactone oxidase activity`GO:0050660^molecular_function^flavin adenine dinucleotide binding`GO:0050105^molecular_function^L-gulonolactone oxidase activity`GO:0019853^biological_process^L-ascorbic acid biosynthetic process","GO:0003885^molecular_function^D-arabinono-1,4-lactone oxidase activity`GO:0055114^biological_process^oxidation-reduction process`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN45504_c3_g2","leaves S. abrotanoides","leaves S. yangii",-1.88249627004911,"0.000564560357925628","0.00166413494919307","TRINITY_DN45504_c3_g2_i1","GL23_ORYSJ^GL23_ORYSJ^Q:144-737,H:26-223^58.08%ID^E:3e-75^RecName: Full=Putative germin-like protein 2-3;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza",".","TRINITY_DN45504_c3_g2_i1.p1","87-740[+]","GL21_ORYSJ^GL21_ORYSJ^Q:3-217,H:4-216^55.81%ID^E:1e-77^RecName: Full=Putative germin-like protein 2-1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza","PF00190.19^Cupin_1^Cupin^62-210^E:1.7e-44`PF07883.8^Cupin_2^Cupin domain^99-168^E:6.5e-08","sigP:1^22^0.904^YES",".","ENOG410YERY^nutrient reservoir activity","KEGG:osa:4329389","GO:0048046^cellular_component^apoplast`GO:0005618^cellular_component^cell wall`GO:0030145^molecular_function^manganese ion binding`GO:0045735^molecular_function^nutrient reservoir activity`GO:0046564^molecular_function^oxalate decarboxylase activity`GO:0033609^biological_process^oxalate metabolic process","GO:0045735^molecular_function^nutrient reservoir activity",".","."]
["TRINITY_DN44488_c1_g17","leaves S. abrotanoides","leaves S. yangii",-1.93856818481482,"0.00374121730685639","0.00928227730623188","TRINITY_DN44488_c1_g17_i1","CXE1_ACTER^CXE1_ACTER^Q:238-1191,H:7-327^51.39%ID^E:2e-108^RecName: Full=Carboxylesterase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia",".","TRINITY_DN44488_c1_g17_i1.p1","250-1209[+]","CXE1_ACTER^CXE1_ACTER^Q:13-314,H:27-327^53.14%ID^E:9e-110^RecName: Full=Carboxylesterase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia","PF00135.25^COesterase^Carboxylesterase family^57-116^E:0.00026`PF07859.10^Abhydrolase_3^alpha/beta hydrolase fold^74-295^E:3.7e-51",".",".",".",".","GO:0052689^molecular_function^carboxylic ester hydrolase activity","GO:0016787^molecular_function^hydrolase activity`GO:0008152^biological_process^metabolic process",".","."]
["TRINITY_DN42379_c1_g1","leaves S. abrotanoides","leaves S. yangii",-1.97666089968916,{"v":505723022.88566,"d":"5.06E+08"},"0.000179283834261028","TRINITY_DN42379_c1_g1_i1","VILI3_ARATH^VILI3_ARATH^Q:368-2644,H:1-759^70.96%ID^E:0^RecName: Full=Villin-3 {ECO:0000303|PubMed:10631247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`VILI3_ARATH^VILI3_ARATH^Q:2990-3154,H:895-951^56.14%ID^E:1e-08^RecName: Full=Villin-3 {ECO:0000303|PubMed:10631247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN42379_c1_g1_i1.p1","368-3199[+]","VILI2_ARATH^VILI2_ARATH^Q:4-943,H:2-976^64.37%ID^E:0^RecName: Full=Villin-2 {ECO:0000303|PubMed:10631247};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00626.19^Gelsolin^Gelsolin repeat^29-111^E:4.9e-15`PF00626.19^Gelsolin^Gelsolin repeat^150-217^E:1.5e-11`PF00626.19^Gelsolin^Gelsolin repeat^267-337^E:5.1e-15`PF00626.19^Gelsolin^Gelsolin repeat^411-485^E:2.7e-07`PF00626.19^Gelsolin^Gelsolin repeat^534-602^E:1.9e-08`PF02209.16^VHP^Villin headpiece domain^908-943^E:5.7e-15",".",".","ENOG410XR0A^capping protein (actin filament) gelsolin-like","KEGG:ath:AT2G41740","GO:0005737^cellular_component^cytoplasm`GO:0005856^cellular_component^cytoskeleton`GO:0051017^biological_process^actin filament bundle assembly`GO:0051693^biological_process^actin filament capping","GO:0003779^molecular_function^actin binding`GO:0007010^biological_process^cytoskeleton organization",".","."]
["TRINITY_DN22217_c0_g1","leaves S. abrotanoides","leaves S. yangii",-1.99064043466631,"0.000473357872038342","0.00141792465342728","TRINITY_DN22217_c0_g1_i1","KCS20_ARATH^KCS20_ARATH^Q:576-184,H:389-520^68.18%ID^E:3e-60^RecName: Full=3-ketoacyl-CoA synthase 20 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN22217_c0_g1_i1.p1","175-576[-]","KCS2_ARATH^KCS2_ARATH^Q:1-129,H:381-513^66.17%ID^E:2e-61^RecName: Full=3-ketoacyl-CoA synthase 2 {ECO:0000303|PubMed:18465198};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08541.7^ACP_syn_III_C^3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal^24-106^E:5.8e-13`PF02797.12^Chal_sti_synt_C^Chalcone and stilbene synthases, C-terminal domain^28-96^E:5.9e-08",".",".","ENOG410Y5VH^3-ketoacyl-coa synthase","KEGG:ath:AT1G04220`KO:K15397","GO:0016021^cellular_component^integral component of membrane`GO:0009922^molecular_function^fatty acid elongase activity`GO:0006633^biological_process^fatty acid biosynthetic process`GO:0006970^biological_process^response to osmotic stress`GO:0009611^biological_process^response to wounding`GO:0010345^biological_process^suberin biosynthetic process",".",".","."]
["TRINITY_DN15762_c0_g2","leaves S. abrotanoides","leaves S. yangii",-2.00020262180377,"0.000158548609331739","0.000518198351784641","TRINITY_DN15762_c0_g2_i1","PTM_ARATH^PTM_ARATH^Q:518-156,H:1005-1128^29.84%ID^E:1e-10^RecName: Full=DDT domain-containing protein PTM {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN15762_c0_g2_i1.p1","3-521[-]","PTM_ARATH^PTM_ARATH^Q:2-122,H:1005-1128^29.84%ID^E:1e-10^RecName: Full=DDT domain-containing protein PTM {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".",".","KEGG:ath:AT5G35210","GO:0009707^cellular_component^chloroplast outer membrane`GO:0016021^cellular_component^integral component of membrane`GO:0005634^cellular_component^nucleus`GO:0004222^molecular_function^metalloendopeptidase activity`GO:0008270^molecular_function^zinc ion binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN88086_c0_g1","leaves S. abrotanoides","leaves S. yangii",-2.01637563230551,"0.000325223428664433","0.00100406420410263","TRINITY_DN88086_c0_g1_i1","Y1215_ARATH^Y1215_ARATH^Q:6-1040,H:68-396^33.62%ID^E:3e-32^RecName: Full=WEB family protein At1g12150;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN88086_c0_g1_i1.p1","3-1211[+]","Y1215_ARATH^Y1215_ARATH^Q:2-385,H:68-435^35.31%ID^E:7e-43^RecName: Full=WEB family protein At1g12150;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF05701.8^WEMBL^Weak chloroplast movement under blue light^4-384^E:1.1e-17",".",".","ENOG410ZHIN^Pfam:DUF827","KEGG:ath:AT1G12150",".",".",".","."]
["TRINITY_DN61323_c0_g1","leaves S. abrotanoides","leaves S. yangii",-2.0168618938984,"0.00507619053744156","0.0121660949655754","TRINITY_DN61323_c0_g1_i1","ATL71_ARATH^ATL71_ARATH^Q:426-848,H:20-173^35.03%ID^E:3e-24^RecName: Full=Putative RING-H2 finger protein ATL71;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN61323_c0_g1_i1.p1","360-908[+]","ATL71_ARATH^ATL71_ARATH^Q:23-174,H:20-184^39.39%ID^E:2e-33^RecName: Full=Putative RING-H2 finger protein ATL71;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13639.3^zf-RING_2^Ring finger domain^119-161^E:2.4e-15`PF17123.2^zf-RING_11^RING-like zinc finger^119-147^E:2.8e-11`PF13923.3^zf-C3HC4_2^Zinc finger, C3HC4 type (RING finger)^119-160^E:5.9e-10`PF13445.3^zf-RING_UBOX^RING-type zinc-finger^119-158^E:5.5e-08`PF00097.22^zf-C3HC4^Zinc finger, C3HC4 type (RING finger)^119-160^E:1.7e-07",".",".","ENOG41121N2^zinc ion binding","KEGG:ath:AT5G06490","GO:0016021^cellular_component^integral component of membrane`GO:0008270^molecular_function^zinc ion binding`GO:0016567^biological_process^protein ubiquitination","GO:0005515^molecular_function^protein binding`GO:0008270^molecular_function^zinc ion binding`GO:0046872^molecular_function^metal ion binding",".","."]
["TRINITY_DN95600_c0_g1","leaves S. abrotanoides","leaves S. yangii",-2.08791445324668,"0.000105599997947386","0.000356044341174726","TRINITY_DN95600_c0_g1_i1","GT14B_ARATH^GT14B_ARATH^Q:3-686,H:186-424^61.67%ID^E:1e-101^RecName: Full=Beta-glucuronosyltransferase GlcAT14B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN95600_c0_g1_i1.p1","3-713[+]","GT14B_ARATH^GT14B_ARATH^Q:1-234,H:186-430^60.98%ID^E:3e-103^RecName: Full=Beta-glucuronosyltransferase GlcAT14B {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02485.18^Branch^Core-2/I-Branching enzyme^1-162^E:1e-41",".",".","ENOG410XQ7M^Glucosaminyl (N-acetyl) transferase","KEGG:ath:AT5G15050","GO:0000139^cellular_component^Golgi membrane`GO:0016021^cellular_component^integral component of membrane`GO:0008375^molecular_function^acetylglucosaminyltransferase activity`GO:0015020^molecular_function^glucuronosyltransferase activity","GO:0008375^molecular_function^acetylglucosaminyltransferase activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN46066_c0_g1","leaves S. abrotanoides","leaves S. yangii",-2.12041345716879,"0.00023516014827094","0.00074413269415077","TRINITY_DN46066_c0_g1_i1","R1A6_SOLDE^R1A6_SOLDE^Q:1260-151,H:520-863^32.98%ID^E:8e-43^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum",".","TRINITY_DN46066_c0_g1_i1.p1","1-1629[-]","R1A6_SOLDE^R1A6_SOLDE^Q:123-493,H:519-863^32.89%ID^E:4e-43^RecName: Full=Putative late blight resistance protein homolog R1A-6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum","PF00931.19^NB-ARC^NB-ARC domain^153-429^E:2.4e-58",".",".",".",".","GO:0005737^cellular_component^cytoplasm`GO:0016020^cellular_component^membrane`GO:0043531^molecular_function^ADP binding`GO:0005524^molecular_function^ATP binding`GO:0009626^biological_process^plant-type hypersensitive response","GO:0043531^molecular_function^ADP binding",".","."]
["TRINITY_DN44779_c2_g2","leaves S. abrotanoides","leaves S. yangii",-2.12513320562049,"0.000135007814861414","0.000447096602401891","TRINITY_DN44779_c2_g2_i2","LHTL6_ARATH^LHTL6_ARATH^Q:97-462,H:319-440^63.93%ID^E:9e-36^RecName: Full=Lysine histidine transporter-like 6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44779_c2_g2_i2.p1","91-465[+]","LHT1_ARATH^LHT1_ARATH^Q:3-124,H:325-446^53.28%ID^E:2e-38^RecName: Full=Lysine histidine transporter 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01490.15^Aa_trans^Transmembrane amino acid transporter protein^2-107^E:8.5e-21",".",".","COG0814^amino acid transport","KEGG:ath:AT5G40780","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0015171^molecular_function^amino acid transmembrane transporter activity`GO:0015293^molecular_function^symporter activity`GO:0043090^biological_process^amino acid import`GO:0003333^biological_process^amino acid transmembrane transport`GO:0080167^biological_process^response to karrikin",".",".","."]
["TRINITY_DN47234_c2_g1","leaves S. abrotanoides","leaves S. yangii",-2.20421719642761,"0.00177518126362892","0.00472817086657568","TRINITY_DN47234_c2_g1_i2","SURF1_ARATH^SURF1_ARATH^Q:853-65,H:65-333^29.79%ID^E:2e-21^RecName: Full=Surfeit locus protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47234_c2_g1_i2.p1","17-979[-]","SURF1_ARATH^SURF1_ARATH^Q:43-305,H:65-333^30.5%ID^E:6e-24^RecName: Full=Surfeit locus protein 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF02104.12^SURF1^SURF1 family^65-304^E:2.5e-11",".",".","COG3346^Surfeit locus 1 family protein","KEGG:ath:AT3G17910`KO:K14998","GO:0016021^cellular_component^integral component of membrane`GO:0005743^cellular_component^mitochondrial inner membrane`GO:0005739^cellular_component^mitochondrion","GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN49698_c0_g1","leaves S. abrotanoides","leaves S. yangii",-2.27180493416951,{"v":3331764452.00382,"d":"3.33E+09"},"0.000121659968435236","TRINITY_DN49698_c0_g1_i1","BH041_ARATH^BH041_ARATH^Q:79-312,H:383-463^47.56%ID^E:1e-07^RecName: Full=Putative transcription factor bHLH041;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN49698_c0_g1_i1.p1","1-324[+]","BH041_ARATH^BH041_ARATH^Q:13-104,H:369-463^44.79%ID^E:2e-10^RecName: Full=Putative transcription factor bHLH041;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".",".",".","ENOG410YFS3^Transcription factor","KEGG:ath:AT5G56960","GO:0005634^cellular_component^nucleus`GO:0003677^molecular_function^DNA binding`GO:0003700^molecular_function^transcription factor activity, sequence-specific DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated`GO:0010200^biological_process^response to chitin`GO:0006351^biological_process^transcription, DNA-templated",".",".","."]
["TRINITY_DN62142_c0_g1","leaves S. abrotanoides","leaves S. yangii",-2.34195942396011,"0.00331096361025418","0.00832001403920075","TRINITY_DN62142_c0_g1_i1","RNHX1_ARATH^RNHX1_ARATH^Q:527-120,H:220-355^24.09%ID^E:1e-07^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN62142_c0_g1_i1.p1","3-578[-]","RNHX1_ARATH^RNHX1_ARATH^Q:18-153,H:220-355^24.09%ID^E:1e-07^RecName: Full=Putative ribonuclease H protein At1g65750;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13966.3^zf-RVT^zinc-binding in reverse transcriptase^62-151^E:2e-21",".",".",".",".","GO:0046872^molecular_function^metal ion binding`GO:0003676^molecular_function^nucleic acid binding`GO:0004523^molecular_function^RNA-DNA hybrid ribonuclease activity",".",".","."]
["TRINITY_DN41966_c0_g2","leaves S. abrotanoides","leaves S. yangii",-2.43226496355997,"0.000589146198987428","0.00172921803798819","TRINITY_DN41966_c0_g2_i1","LIN1_LOTJA^LIN1_LOTJA^Q:1366-230,H:812-1181^32.11%ID^E:1e-21^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:1660-1439,H:512-584^52.7%ID^E:5e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:2602-2231,H:114-267^32.47%ID^E:1e-12^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus",".","TRINITY_DN41966_c0_g2_i1.p1","212-3601[-]","LIN1_LOTJA^LIN1_LOTJA^Q:746-1124,H:812-1181^32.11%ID^E:2e-34^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:648-721,H:512-584^52.7%ID^E:3e-16^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus`LIN1_LOTJA^LIN1_LOTJA^Q:286-457,H:75-267^31.68%ID^E:3e-14^RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1 {ECO:0000250|UniProtKB:D1FP53};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus","PF04564.12^U-box^U-box domain^647-719^E:6.5e-08",".",".",".",".","GO:0016874^molecular_function^ligase activity`GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0009877^biological_process^nodulation","GO:0004842^molecular_function^ubiquitin-protein transferase activity`GO:0016567^biological_process^protein ubiquitination",".","."]
["TRINITY_DN47747_c1_g3","leaves S. abrotanoides","leaves S. yangii",-2.48041544056324,"0.000129833382636031","0.000431470096690619","TRINITY_DN47747_c1_g3_i1","NIK1_ARATH^NIK1_ARATH^Q:288-28,H:116-203^40.45%ID^E:5e-07^RecName: Full=Protein NSP-INTERACTING KINASE 1 {ECO:0000303|PubMed:15489295};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47747_c1_g3_i1.p1","1-300[-]","NIK1_ARATH^NIK1_ARATH^Q:5-91,H:116-203^40.45%ID^E:4e-07^RecName: Full=Protein NSP-INTERACTING KINASE 1 {ECO:0000303|PubMed:15489295};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF13516.3^LRR_6^Leucine Rich repeat^64-79^E:2",".",".","ENOG410ZS46^NSP-interacting kinase","KEGG:ath:AT5G16000","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity`GO:0051607^biological_process^defense response to virus`GO:0016032^biological_process^viral process","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN46042_c0_g7","leaves S. abrotanoides","leaves S. yangii",-2.54570125477448,{"v":2718679020.93966,"d":"2.72E+09"},"0.000100931827795295","TRINITY_DN46042_c0_g7_i1","VINSY_RAUSE^VINSY_RAUSE^Q:43-1299,H:1-411^37.04%ID^E:6e-70^RecName: Full=Vinorine synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Rauvolfiinae; Rauvolfia",".","TRINITY_DN46042_c0_g7_i1.p1","43-1353[+]","VINSY_RAUSE^VINSY_RAUSE^Q:1-419,H:1-411^37.04%ID^E:2e-77^RecName: Full=Vinorine synthase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Rauvolfiinae; Rauvolfia","PF02458.12^Transferase^Transferase family^7-421^E:2.7e-79",".",".",".","KEGG:ag:CAD89104`KO:K12694","GO:0050636^molecular_function^vinorine synthase activity`GO:0009820^biological_process^alkaloid metabolic process","GO:0016747^molecular_function^transferase activity, transferring acyl groups other than amino-acyl groups",".","."]
["TRINITY_DN47234_c1_g2","leaves S. abrotanoides","leaves S. yangii",-2.59484096850106,"0.000869988565544079","0.00247170290007265","TRINITY_DN47234_c1_g2_i1","CP511_ARATH^CP511_ARATH^Q:463-194,H:69-158^86.67%ID^E:5e-48^RecName: Full=Sterol 14-demethylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN47234_c1_g2_i1.p1","131-463[-]","CP511_ARATH^CP511_ARATH^Q:1-90,H:69-158^86.67%ID^E:2e-48^RecName: Full=Sterol 14-demethylase;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00067.19^p450^Cytochrome P450^2-97^E:1.9e-05",".",".","COG2124^Cytochrome p450","KEGG:ath:AT1G11680`KO:K05917","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005794^cellular_component^Golgi apparatus`GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0020037^molecular_function^heme binding`GO:0005506^molecular_function^iron ion binding`GO:0008168^molecular_function^methyltransferase activity`GO:0008398^molecular_function^sterol 14-demethylase activity`GO:0070988^biological_process^demethylation`GO:0016126^biological_process^sterol biosynthetic process","GO:0005506^molecular_function^iron ion binding`GO:0016705^molecular_function^oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen`GO:0020037^molecular_function^heme binding`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN45691_c3_g2","leaves S. abrotanoides","leaves S. yangii",-2.66349373122902,"0.000320979292073875","0.000991629271511996","TRINITY_DN45691_c3_g2_i7","Y5126_ARATH^Y5126_ARATH^Q:1608-238,H:33-485^70.24%ID^E:0^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN45691_c3_g2_i7.p1","229-1626[-]","Y5126_ARATH^Y5126_ARATH^Q:7-463,H:33-485^70.24%ID^E:0^RecName: Full=Probable serine/threonine-protein kinase At5g41260;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00069.22^Pkinase^Protein kinase domain^46-282^E:3.9e-22`PF07714.14^Pkinase_Tyr^Protein tyrosine kinase^47-284^E:2.5e-24",".",".","ENOG410XQTV^serine threonine-protein kinase","KEGG:ath:AT5G41260`KO:K14500","GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004674^molecular_function^protein serine/threonine kinase activity","GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation",".","."]
["TRINITY_DN47093_c8_g1","leaves S. abrotanoides","leaves S. yangii",-2.70071710777135,"0.000394514662269017","0.00120007854934976","TRINITY_DN47093_c8_g1_i1","URT1_FRAAN^URT1_FRAAN^Q:860-1231,H:7-128^46.77%ID^E:6e-23^RecName: Full=Putative UDP-rhamnose:rhamnosyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".","TRINITY_DN47093_c8_g1_i1.p1","836-1237[+]","URT1_FRAAN^URT1_FRAAN^Q:9-132,H:7-128^48.39%ID^E:7e-31^RecName: Full=Putative UDP-rhamnose:rhamnosyltransferase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria",".",".",".",".",".","GO:0016021^cellular_component^integral component of membrane`GO:0016758^molecular_function^transferase activity, transferring hexosyl groups",".",".","."]
["TRINITY_DN128059_c0_g1","leaves S. abrotanoides","leaves S. yangii",-2.73353313921152,"0.000634939084488823","0.00185150175782237","TRINITY_DN128059_c0_g1_i1","GLR27_ARATH^GLR27_ARATH^Q:368-3,H:485-601^45.08%ID^E:7e-30^RecName: Full=Glutamate receptor 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN128059_c0_g1_i1.p1","3-371[-]","GLR27_ARATH^GLR27_ARATH^Q:2-123,H:485-601^45.08%ID^E:6e-30^RecName: Full=Glutamate receptor 2.7;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF10613.6^Lig_chan-Glu_bd^Ligated ion channel L-glutamate- and glycine-binding site^4-87^E:2.8e-13`PF00497.17^SBP_bac_3^Bacterial extracellular solute-binding proteins, family 3^5-92^E:7.7e-09",".",".","ENOG410XQQV^glutamate receptor","KEGG:ath:AT2G29120","GO:0016021^cellular_component^integral component of membrane`GO:0005886^cellular_component^plasma membrane`GO:0005773^cellular_component^vacuole`GO:0005262^molecular_function^calcium channel activity`GO:0008066^molecular_function^glutamate receptor activity`GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0070588^biological_process^calcium ion transmembrane transport`GO:0006816^biological_process^calcium ion transport`GO:0019722^biological_process^calcium-mediated signaling`GO:0071230^biological_process^cellular response to amino acid stimulus","GO:0004970^molecular_function^ionotropic glutamate receptor activity`GO:0005234^molecular_function^extracellular-glutamate-gated ion channel activity`GO:0016020^cellular_component^membrane",".","."]
["TRINITY_DN9948_c0_g1","leaves S. abrotanoides","leaves S. yangii",-3.22261535841859,0,0,"TRINITY_DN9948_c0_g1_i2","TKPR1_ARATH^TKPR1_ARATH^Q:112-822,H:4-240^52.94%ID^E:3e-71^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN9948_c0_g1_i2.p1","115-774[+]","TKPR1_ARATH^TKPR1_ARATH^Q:4-212,H:8-215^57.42%ID^E:2e-81^RecName: Full=Tetraketide alpha-pyrone reductase 1;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF01370.18^Epimerase^NAD dependent epimerase/dehydratase family^4-203^E:1e-21`PF05368.10^NmrA^NmrA-like family^4-98^E:8e-09`PF01073.16^3Beta_HSD^3-beta hydroxysteroid dehydrogenase/isomerase family^6-172^E:4.5e-15`PF07993.9^NAD_binding_4^Male sterility protein^6-203^E:3.1e-13`PF16363.2^GDP_Man_Dehyd^GDP-mannose 4,6 dehydratase^6-186^E:3.7e-09`PF13460.3^NAD_binding_10^NAD(P)H-binding^8-187^E:8.6e-15",".",".","COG0451^Nad-dependent epimerase dehydratase","KEGG:ath:AT4G35420","GO:0005783^cellular_component^endoplasmic reticulum`GO:0005634^cellular_component^nucleus`GO:0050662^molecular_function^coenzyme binding`GO:0016491^molecular_function^oxidoreductase activity`GO:0009555^biological_process^pollen development`GO:0010584^biological_process^pollen exine formation`GO:0048316^biological_process^seed development`GO:0080110^biological_process^sporopollenin biosynthetic process","GO:0003824^molecular_function^catalytic activity`GO:0050662^molecular_function^coenzyme binding`GO:0003854^molecular_function^3-beta-hydroxy-delta5-steroid dehydrogenase activity`GO:0016616^molecular_function^oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor`GO:0006694^biological_process^steroid biosynthetic process`GO:0055114^biological_process^oxidation-reduction process",".","."]
["TRINITY_DN44559_c0_g3","leaves S. abrotanoides","leaves S. yangii",-3.30441019980392,{"v":3491381702.50008,"d":"3.49E+09"},"0.000127019791462384","TRINITY_DN44559_c0_g3_i1","FLS2_ARATH^FLS2_ARATH^Q:146-2149,H:37-721^32.43%ID^E:3e-56^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:371-1852,H:256-748^31.38%ID^E:3e-47^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:260-1540,H:340-765^29.8%ID^E:5e-28^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:1415-2152,H:98-336^34.55%ID^E:6e-23^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:350-781,H:609-768^37.5%ID^E:3e-16^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN44559_c0_g3_i1.p1","2-2155[+]","FLS2_ARATH^FLS2_ARATH^Q:15-716,H:1-721^32.21%ID^E:1e-70^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:82-617,H:167-748^31.07%ID^E:3e-57^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:87-559,H:340-763^30.82%ID^E:8e-46^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:472-717,H:98-336^34.55%ID^E:5e-25^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis`FLS2_ARATH^FLS2_ARATH^Q:88-260,H:580-768^36.51%ID^E:2e-19^RecName: Full=LRR receptor-like serine/threonine-protein kinase FLS2;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF08263.9^LRRNT_2^Leucine rich repeat N-terminal domain^41-78^E:1.3e-14`PF13516.3^LRR_6^Leucine Rich repeat^107-120^E:1.8`PF00560.30^LRR_1^Leucine Rich Repeat^192-213^E:0.031`PF13516.3^LRR_6^Leucine Rich repeat^405-416^E:2`PF13855.3^LRR_8^Leucine rich repeat^471-530^E:2.8e-07`PF00560.30^LRR_1^Leucine Rich Repeat^495-517^E:0.18`PF00560.30^LRR_1^Leucine Rich Repeat^593-614^E:0.067",".",".","COG0515^Serine Threonine protein kinase`COG4886^leucine Rich Repeat","KEGG:ath:AT5G46330`KO:K13420","GO:0005768^cellular_component^endosome`GO:0010008^cellular_component^endosome membrane`GO:0016021^cellular_component^integral component of membrane`GO:0016020^cellular_component^membrane`GO:0005886^cellular_component^plasma membrane`GO:0005524^molecular_function^ATP binding`GO:0004675^molecular_function^transmembrane receptor protein serine/threonine kinase activity`GO:0052544^biological_process^defense response by callose deposition in cell wall`GO:0042742^biological_process^defense response to bacterium`GO:0016045^biological_process^detection of bacterium`GO:0006898^biological_process^receptor-mediated endocytosis`GO:0010359^biological_process^regulation of anion channel activity`GO:0007178^biological_process^transmembrane receptor protein serine/threonine kinase signaling pathway","GO:0005515^molecular_function^protein binding",".","."]
["TRINITY_DN87031_c0_g1","leaves S. abrotanoides","leaves S. yangii",-3.31361064218543,{"v":3487932417.71872,"d":"3.49E+09"},"0.000126915508795801","TRINITY_DN87031_c0_g1_i1","IP5P8_ARATH^IP5P8_ARATH^Q:1742-396,H:2-420^60.22%ID^E:4e-173^RecName: Full=Type I inositol polyphosphate 5-phosphatase 8 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN87031_c0_g1_i1.p1","369-1754[-]","IP5P8_ARATH^IP5P8_ARATH^Q:5-453,H:2-420^59.47%ID^E:2e-177^RecName: Full=Type I inositol polyphosphate 5-phosphatase 8 {ECO:0000305};^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF03372.20^Exo_endo_phos^Endonuclease/Exonuclease/phosphatase family^96-444^E:1.6e-41",".",".","COG5411^inositol","KEGG:ath:AT2G37440","GO:0016787^molecular_function^hydrolase activity`GO:0046856^biological_process^phosphatidylinositol dephosphorylation",".",".","."]
["TRINITY_DN41549_c0_g2","leaves S. abrotanoides","leaves S. yangii",-3.4369345476263,{"v":8569379669.50957,"d":"8.57E+09"},"0.00029326988638557","TRINITY_DN41549_c0_g2_i1","PTR38_ARATH^PTR38_ARATH^Q:1488-142,H:99-556^47%ID^E:3e-122^RecName: Full=Protein NRT1/ PTR FAMILY 2.6;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis",".","TRINITY_DN41549_c0_g2_i1.p1","139-1293[-]","PTR41_ARATH^PTR41_ARATH^Q:2-381,H:159-542^47.56%ID^E:6e-124^RecName: Full=Protein NRT1/ PTR FAMILY 2.4;^Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis","PF00854.18^PTR2^POT family^1-332^E:1.9e-50",".",".","COG3104^transporter","KEGG:ath:AT3G45700","GO:0016021^cellular_component^integral component of membrane`GO:0005215^molecular_function^transporter activity`GO:0042128^biological_process^nitrate assimilation`GO:0006857^biological_process^oligopeptide transport","GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane",".","."]