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["Specimen","姓名","Known Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","Likely Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","Unknown Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","Ambiguous Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","Known CNAs Type Copy_number Number_of_exons","Likely CNAs Type Copy_number Number_of_exons","Unknown CNAs Type Copy_number Number_of_exons","Ambiguous CNAs Type Copy_number Number_of_exons","Known Rearrangements Description Read_pairs","Likely Rearrangements Description Read_pairs","Unknown Rearrangements Description Read_pairs"]
[8888880000817,"patient 1","NF1:NM_001042492:c.6473T>G_p.L2158*(0.485,266), TP53:NM_000546:c.809T>G_p.F270C(0.6019,319)",null,"MAP3K1:NM_005921:c.3068G>A_p.R1023H(0.7791,258), PARP3:NM_005485:c.79G>C_p.D27H(0.2321,224), MST1R:NM_002447:c.301T>G_p.C101G(0.2059,238), FANCG:NM_004629:c.1292T>G_p.M431R(0.7525,396), MLL2:NM_003482:c.7414C>T_p.P2472S(0.5622,233), POLE:NM_006231:c.1282G>A_p.A428T(0.8379,290), GATA3:NM_001002295:c.242G>C_p.G81A(0.2783,442), STAG2:NM_006603:c.940A>G_p.I314V(0.5591,254), ALOX12B:NM_001139:c.1216G>A_p.A406T(0.797,197), PARK2:NM_004562:c.799T>C_p.Y267H(0.4954,218)",null,"MYC_amplification(6,exons 5 of 5), CDKN2A_loss(0,exons 5 of 5)",null,"TEK_loss(0,exons 23 of 23)",{"$nulls":3},"RAD54L_PIK3R3_RAD54L(NM_003579) rearrangement exon 5_60"]
[8888880000810,"patient 2","TP53:NM_000546:c.659A>G_p.Y220C(0.3583,307)","CREBBP:NM_004380:c.2475delT_p.G826fs*23(0.4371,286), EP300:NM_001429:c.3671+1G>A_p.splice site 3671+1G>A(0.3663,374)","RET:NM_020975:c.2488G>A_p.G830R(0.1894,433), STK11:NM_000455:c.1062C>G_p.F354L(0.3211,299), MLL2:NM_003482:c.11580_11582delGCA_p.Q3863del(0.0824,267), TET2:NM_001127208:c.4590_4604delTCTACAGAAGCAGCC_p.L1531_P1535del(0.623,252), CREBBP:NM_004380:c.2936C>T_p.A979V(0.2835,381), TET2:NM_001127208:c.1798A>G_p.M600V(0.6578,301), DIS3:NM_001128226:c.1481C>T_p.A494V(0.6227,387), ROS1:NM_002944:c.6572G>T_p.W2191L(0.4348,391)",null,"MCL1_amplification(32,exons 5 of 5)",null,"H3F3A_amplification(15,exons 3 of 3), BTG2_amplification(11,exons 2 of 2)"]
[8888880000813,"patient 3","TP53:NM_000546:c.731G>A_p.G244D(0.5308,211)",null,"ZNF217:NM_006526:c.1645G>A_p.A549T(0.4064,406), AXIN1:NM_003502:c.213G>T_p.E71D(0.4164,293), ATR:NM_001184:c.1030G>A_p.A344T(0.1736,311), IKBKE:NM_014002:c.146G>T_p.R49L(0.4545,275), SDHB:NM_003000:c.528G>T_p.E176D(0.2007,279), FANCL:NM_018062:c.913A>G_p.M305V(0.5076,264), NTRK1:NM_002529:c.239A>G_p.Q80R(0.5072,278), TBX3:NM_016569:c.1412G>A_p.R471H(0.4138,232), SOX9:NM_000346:c.1405A>G_p.M469V(0.5802,536), NBN:NM_002485:c.80G>C_p.G27A(0.2727,616), BRCA1:NM_007294:c.5068A>C_p.K1690Q(0.7,130)",null,"RAD21_amplification(52,exons 13 of 13), NFKBIA_amplification(23,exons 6 of 6), ERBB2_amplification(147,exons 27 of 27)",null,"CDK12_amplification(75,exons 14 of 14), MAP3K1_amplification(14,exons 20 of 20)"]

{"sheet":"CNV","index":1,"n_rows":12,"n_cols":6,"rows_kept":12,"flags":["formulas_cached_only"]}
["Specimen","Gene","CAN type","Copy number","Number of exons","function"]
[8888880000817,"MYC","amplification",6,"exons 5 of 5","Known"]
[8888880000817,"CDKN2A","loss",0,"exons 5 of 5","Known"]
[8888880000817,"TEK","loss",0,"exons 23 of 23","Unknown"]
[8888880000810,"MCL1","amplification",32,"exons 5 of 5","Known"]
[8888880000810,"H3F3A","amplification",6,"exons 3 of 3","Unknown"]
[8888880000810,"BTG2","amplification",4,"exons 2 of 2","Unknown"]
[8888880000813,"RAD21","amplification",2,"exons 13 of 13","Known"]
[8888880000813,"NFKBIA","amplification",3,"exons 6 of 6","Known"]
[8888880000813,"ERBB2","amplification",7,"exons 27 of 27","Known"]
[8888880000813,"CDK12","amplification",5,"exons 14 of 14","Unknown"]
[8888880000813,"MAP3K1","amplification",4,"exons 20 of 20","Unknown"]

{"sheet":"rearrangement","index":2,"n_rows":2,"n_cols":4,"rows_kept":2,"flags":["formulas_cached_only"]}
["Specimen","Rearrangements Description ","read_pairs","function"]
[8888880000817,"RAD54L_PIK3R3_RAD54L(NM_003579) rearrangement exon 5",60,"Unknown"]

{"sheet":"配置","index":3,"n_rows":23,"n_cols":4,"rows_kept":23,"hidden":true,"flags":["formulas_cached_only"]}
["Field","Scope"]
["Specimen"]
["Known Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","SNVINDEL"]
["Likely Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","SNVINDEL"]
["Unknown Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","SNVINDEL"]
["Ambiguous Short Variants Transcript,CDS Effect, Protein Effect(percent_read, coverage)","SNVINDEL"]
["Known CNAs Type Copy_number Number_of_exons","CNV"]
["Likely CNAs Type Copy_number Number_of_exons","CNV"]
["Unknown CNAs Type Copy_number Number_of_exons","CNV"]
["Ambiguous CNAs Type Copy_number Number_of_exons","CNV"]
["Known Rearrangements Description Read_pairs","rearrangement"]
["Likely Rearrangements Description Read_pairs","rearrangement"]
["Unknown Rearrangements Description Read_pairs","rearrangement"]
[]
[]
[{"$nulls":3},{"$error":"#VALUE!"}]
[{"$nulls":3},{"$error":"#VALUE!"}]
["FANCA_DEF8_DEF8(NM_207514)-FANCA(NM_000135) fusion (D9; F4*)_109",64,null,4]
[]
[]
["MYCL1_ZSWIM5_MYCL1(NM_005376) rearrangement intron 1_22, FGF12_FGF12_FGF12(NM_004113) inv_ersion intron 1 - intron 2_29"]
[56]
["FGF12_FGF12_FGF12(NM_004113) inv_ersion intron 1 - intron 2_29"]