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{"sheet":"Table_S2","index":0,"n_rows":18,"n_cols":21,"rows_kept":18,"merged":[[1,4,1,12],[1,14,1,20],[2,4,2,7],[2,9,2,12],[2,14,2,16],[2,18,2,20]]}
[]
[{"$nulls":4},"Paired-end (PE) mode",{"$nulls":9},"Single end (SE) mode"]
[{"$nulls":4},"join 0%",{"$nulls":4},"join 8%",{"$nulls":4},"R1",{"$nulls":3},"R2"]
[null,"Sample","Readsa",null,"Joinedb","Totalc","Discardd","Annotatede",null,"Joinedb","Totalc","Discardd","Annotatede",null,"Totalc","Discardd","Annotatede",null,"Totalc","Discardd","Annotatede"]
[null,"SRR7218579",167858,null,60998,36680,2842,790,null,74004,44913,4398,876,null,104589,14181,1275,null,108717,14415,1075]
[null,"SRR7218581",512508,null,35019,19623,2577,501,null,43616,24746,4026,565,null,58935,11719,902,null,53842,10520,1006]
[null,"SRR7218583",101704,null,148028,59012,3602,1678,null,176612,71888,5679,1905,null,191767,35609,3042,null,173462,30162,3640]
[null,"SRR7218585",142938,null,97775,44836,2259,1482,null,116258,53636,3478,1676,null,142451,23193,2540,null,129287,19926,3195]
[null,"SRR7218580",420361,null,137878,34300,2267,1885,null,164191,41790,3393,2154,null,137593,41154,3520,null,247729,45069,336]
[null,"SRR7218582",68364,null,58430,16891,553,1054,null,66472,20202,881,1193,null,58011,10855,1853,null,51120,9248,2159]
[null,"SRR7218584",327106,null,23010,13551,832,625,null,27166,16198,1237,684,null,40433,7472,990,null,39440,7460,1156]
[null,"SRR7218586",159599,null,52791,28907,2744,876,null,63812,35426,4231,974,null,85418,14723,1441,null,80679,13497,1765]
[]
[null,"a) Reads: Number of raw paired-end reads for each sample"]
[null,"b) Joined: Reads joined at a given percentage difference [fastq-join parameter]"]
[null,"c) Total: Sequences collapsed for miraligner analysis by XICRA"]
[null,"d) Discard: Collapsed sequences discarded due size cutoff by miraligner"]
[null,"e) Annotated: Sequences collapsed annotated as isomiRs by miraligner"]