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[]
[{"$nulls":4},"Paired-end (PE) mode",{"$nulls":9},"Single end (SE) mode"]
[{"$nulls":4},"join 0%",{"$nulls":4},"join 8%",{"$nulls":4},"R1",{"$nulls":3},"R2"]
[null,"Sample","Readsa",null,"Joinedb","Totalc","Discardd","Annotatede",null,"Joinedb","Totalc","Discardd","Annotatede",null,"Totalc","Discardd","Annotatede",null,"Totalc","Discardd","Annotatede"]
[null,"GSM4700205",8808562,null,7808346,922476,185011,11295,null,8446361,991206,192284,12722,null,1246893,286426,24946,null,3343138,362269,13602]
[null,"GSM4700206",8056492,null,7334331,658300,124185,11640,null,7813895,704641,128603,13082,null,854877,191584,24075,null,2870521,244821,13783]
[null,"GSM4700207",10776498,null,9730705,850638,165282,12563,null,10378112,901795,170927,14180,null,1117918,253585,26401,null,3804669,346523,15477]
[null,"GSM4700208",12621524,null,11441192,741668,162943,16843,null,12197509,789494,168396,18788,null,994462,256106,34112,null,4103781,330678,20022]
[null,"GSM4700209",8900103,null,8017093,866042,168674,9652,null,8575939,917740,174663,10893,null,1127906,253795,20598,null,3389078,357451,11976]
[null,"GSM4700210",9463717,null,8510577,782572,148962,13530,null,9099929,835073,154552,15261,null,1023918,229346,27907,null,3425490,311872,16300]
[null,"GSM4700211",9436743,null,8605947,703851,150356,13959,null,9158987,750082,155896,15669,null,917042,223444,29318,null,3201522,292640,16911]
[null,"GSM4700212",11760609,null,10428809,1099031,217679,13081,null,11187870,1157166,224829,14739,null,1456164,329200,28809,null,4348619,431154,16708]
[null,"GSM4700213",7872114,null,7104014,527389,98489,10813,null,7552237,564464,102136,12091,null,696089,160872,22282,null,2632131,217805,12747]
[null,"GSM4700214",9642351,null,8532842,875348,179427,11169,null,9106017,927752,185580,12642,null,1136004,266227,24243,null,3380758,357160,14200]
[null,"GSM4700215",6882063,null,6211230,503815,100736,11436,null,6629178,541112,104525,12814,null,658649,157022,23173,null,2429386,212371,13468]
[null,"GSM4700216",7663305,null,6915609,693812,141277,12036,null,7369802,738785,146313,13565,null,891911,205649,25416,null,2734459,277235,14886]
[null,"GSM4700217",10021732,null,9060003,677205,146748,13384,null,9645924,718679,151683,15172,null,896230,225599,28871,null,3305622,310322,16871]
[null,"GSM4700218",7302523,null,6617937,704282,129127,9486,null,7077085,750110,133904,10669,null,915840,195037,19828,null,2753312,259072,11500]
[null,"GSM4700219",7500810,null,6714598,750662,136447,11342,null,7186216,800942,141467,12689,null,964909,203993,23448,null,2792469,261715,13444]
[null,"GSM4700220",12888629,null,11432473,1052964,213267,11137,null,12239874,1103701,220008,12480,null,1424905,327301,23849,null,4672778,476393,14007]
[null,"GSM4700221",9070006,null,8134547,753755,135004,11323,null,8692764,802795,139933,12639,null,999781,217845,22700,null,3388010,287412,13131]
[null,"GSM4700222",8277066,null,7456946,589925,119129,11023,null,7932995,629728,123402,12340,null,779130,188336,23168,null,2766982,255995,13301]
[null,"GSM4700223",10352515,null,9358494,772266,160136,11011,null,9990589,814811,165427,12413,null,1029082,244730,23928,null,3640413,342797,13941]
[null,"GSM4700224",11164605,null,9983899,944808,187296,11651,null,10682686,996230,193779,13296,null,1261144,290099,25905,null,4060131,413931,15373]
[null,"GSM4700225",13510582,null,12197576,955458,216842,10963,null,13029444,999730,223285,12361,null,1298890,328676,24468,null,4745706,490915,14492]
[null,"GSM4700226",8936088,null,8018516,606796,117903,12219,null,8554474,647350,121992,13674,null,804545,188073,24962,null,3043186,254727,14490]
[null,"GSM4700227",29705996,null,26839455,1144047,267378,19233,null,28587226,1192328,275126,21849,null,1668697,460309,43424,null,9015598,723796,26014]
[null,"GSM4700228",7747261,null,6945464,566134,99522,11235,null,7395765,606283,103349,12562,null,744959,161763,22843,null,2722201,220208,13361]
[null,"GSM4700229",6437157,null,5839292,444426,80977,10389,null,6220159,475278,84013,11583,null,595239,135533,21151,null,2247613,180246,12121]
[null,"GSM4700230",25996312,null,23246428,1119605,278788,15088,null,24854357,1158971,285950,17535,null,1691459,466166,37825,null,8357827,766316,22352]
[null,"GSM4700231",3884985,null,3527812,337784,56721,8541,null,3755622,364434,58886,9511,null,432849,86666,16708,null,1404921,109726,9448]
[null,"GSM4700232",5008482,null,4481290,459395,82816,9077,null,4780457,492092,85864,10114,null,595683,127797,18054,null,1859363,170661,10465]
[]
[null,"a) Reads: Number of raw paired-end reads for each sample"]
[null,"b) Joined: Reads joined at a given percentage difference [fastq-join parameter]"]
[null,"c) Total: Sequences collapsed for miraligner analysis by XICRA"]
[null,"d) Discard: Collapsed sequences discarded due size cutoff by miraligner"]
[null,"e) Annotated: Sequences collapsed annotated as isomiRs by miraligner"]