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["Table S8 Expression levels of 106 candidate genes in Nipponbare under anoxia and aerobic treatments (transcriptome data from Lasanthi-Kudahettige et al. (2007))."]
["SNP","Gene ID","MUS ID","A4d a","AN4d b","Fold Change"]
[]
["S1_ 39674301","Os01g0908800","LOC_Os01g68070",{"v":14.43,"d":"14.4300"},{"v":108.47,"d":"108.4700"},{"v":7.516978516978517,"d":"7.5170"}]
[null,"Os01g0909000","LOC_Os01g68090",{"v":274.46,"d":"274.4600"},{"v":201.24,"d":"201.2400"},{"v":0.733221598775778,"d":"0.7332"}]
[null,"Os01g0909100","LOC_Os01g68104",{"v":144.41,"d":"144.4100"},{"v":195.1,"d":"195.1000"},{"v":1.3510144726819473,"d":"1.3510"}]
[null,"Os01g0909200","LOC_Os01g68120",{"v":561.62,"d":"561.6200"},{"v":328.26,"d":"328.2600"},{"v":0.584487731918379,"d":"0.5845"}]
[null,"Os01g0909300","LOC_Os01g68130",{"v":64.45,"d":"64.4500"},{"v":30.72,"d":"30.7200"},{"v":0.47664856477889833,"d":"0.4766"}]
[null,"Os01g0909400","LOC_Os01g68140",{"v":596.49,"d":"596.4900"},{"v":372.48,"d":"372.4800"},{"v":0.6244530503445155,"d":"0.6245"}]
[null,"Os01g0909500","LOC_Os01g68160",{"v":860.05,"d":"860.0500"},{"v":1091.25,"d":"1091.2500"},{"v":1.2688215801406895,"d":"1.2688"}]
[null,"Os01g0910200","LOC_Os01g68230",{"v":107.36,"d":"107.3600"},{"v":83.8,"d":"83.8000"},{"v":0.7805514157973175,"d":"0.7806"}]
[null,"Os01g0910300","LOC_Os01g68240",{"v":24.77,"d":"24.7700"},{"v":27.34,"d":"27.3400"},{"v":1.1037545417844166,"d":"1.1038"}]
[null,"Os01g0910400","LOC_Os01g68260",{"v":208.89,"d":"208.8900"},{"v":39.65,"d":"39.6500"},{"v":0.1898128201445737,"d":"0.1898"}]
[null,"Os01g0910500","——","N/A","N/A","N/A"]
[null,"Os01g0910800","LOC_Os01g68290",{"v":80.42,"d":"80.4200"},{"v":39.1,"d":"39.1000"},{"v":0.4861974633175827,"d":"0.4862"}]
[null,"Og01g0910900","LOC_Os01g68300",{"v":25.92,"d":"25.9200"},{"v":6.62,"d":"6.6200"},{"v":0.2554012345679012,"d":"0.2554"}]
[null,"Os01g0911000","LOC_Os01g68310",{"v":612.69,"d":"612.6900"},{"v":711.74,"d":"711.7400"},{"v":1.1616641368391845,"d":"1.1617"}]
[null,"Os01g0911100","LOC_Os01g68320",{"v":2207.06,"d":"2207.0600"},{"v":8596.96,"d":"8596.9600"},{"v":3.8952090110826165,"d":"3.8952"}]
[null,"Os01g0911200","LOC_Os01g68324",{"v":2939.75,"d":"2939.7500"},{"v":2523.28,"d":"2523.2800"},{"v":0.858331490773025,"d":"0.8583"}]
[null,"Os01g0911300","LOC_Os01g68330",{"v":327.51,"d":"327.5100"},{"v":498.63,"d":"498.6300"},{"v":1.5224878629660163,"d":"1.5225"}]
[null,"Os01g0911700","LOC_Os01g68370",{"v":283.85,"d":"283.8500"},{"v":1280.43,"d":"1280.4300"},{"v":4.510938876166989,"d":"4.5109"}]
[null,"Os01g0911800","LOC_Os01g68380",{"v":1050.98,"d":"1050.9800"},{"v":1203.03,"d":"1203.0300"},{"v":1.1446744942815277,"d":"1.1447"}]
[null,"Os01g0911900","LOC_Os01g68390",{"v":259.78,"d":"259.7800"},{"v":443.72,"d":"443.7200"},{"v":1.7080606667179925,"d":"1.7081"}]
["S3_ 24689629","Os03g0639700","LOC_Os03g43850",{"v":599.61,"d":"599.6100"},{"v":640.54,"d":"640.5400"},{"v":1.0682610363402878,"d":"1.0683"}]
[null,"Os03g0639800","LOC_Os03g43860",{"v":716.12,"d":"716.1200"},{"v":5884.2,"d":"5884.2000"},{"v":8.216779310730045,"d":"8.2168"}]
[null,"Os03g0640000","LOC_Os03g43880",{"v":907.78,"d":"907.7800"},{"v":201.51,"d":"201.5100"},{"v":0.22198109674150124,"d":"0.2220"}]
[null,"Os03g0640100","LOC_Os03g43890",{"v":2261.23,"d":"2261.2300"},{"v":3801.84,"d":"3801.8400"},{"v":1.68131503650668,"d":"1.6813"}]
[null,"Os03g0640300","LOC_Os03g43900",{"v":98.47,"d":"98.4700"},{"v":67.42,"d":"67.4200"},{"v":0.6846755356961511,"d":"0.6847"}]
[null,"Os03g0640400","LOC_Os03g43910",{"v":945.1,"d":"945.1000"},{"v":1920.88,"d":"1920.8800"},{"v":2.0324621733149932,"d":"2.0325"}]
[null,"Os03g0640800","LOC_Os03g43930",{"v":89.99,"d":"89.9900"},{"v":308.14,"d":"308.1400"},{"v":3.424158239804423,"d":"3.4242"}]
[null,"Os03g0640825","——","N/A","N/A","N/A"]
[null,"Os03g0641200","LOC_Os03g43970","N/A","N/A","N/A"]
[null,"Os03g0641250","——","N/A","N/A","N/A"]
[null,"Os03g0641300","LOC_Os03g43990",{"v":1300.96,"d":"1300.9600"},{"v":2511.85,"d":"2511.8500"},{"v":1.93076651088427,"d":"1.9308"}]
[null,"Os03g0641500","LOC_Os03g44000",{"v":105.3,"d":"105.3000"},{"v":22.56,"d":"22.5600"},{"v":0.21424501424501424,"d":"0.2142"}]
[null,"Os03g0641700","LOC_Os03g44010",{"v":1404.37,"d":"1404.3700"},{"v":1821.96,"d":"1821.9600"},{"v":1.2973504133526066,"d":"1.2974"}]
[null,"Os03g0642300","LOC_Os03g44020","N/A","N/A","N/A"]
[null,"Os03g0642450","——","N/A","N/A","N/A"]
[null,"Os03g0642900","LOC_Os03g44100",{"v":242.69,"d":"242.6900"},{"v":88.09,"d":"88.0900"},{"v":0.3629733404755037,"d":"0.3630"}]
[null,"Os05g0559350","LOC_Os05g48580","N/A","N/A","N/A"]
[null,"Os05g0559400","LOC_Os05g48590",{"v":1730.69,"d":"1730.6900"},{"v":1339.05,"d":"1339.0500"},{"v":0.773708752000647,"d":"0.7737"}]
[null,"Os05g0559600","LOC_Os05g48600",{"v":875.15,"d":"875.1500"},{"v":669.93,"d":"669.9300"},{"v":0.7655030566188653,"d":"0.7655"}]
[null,"Os05g0559800","LOC_Os05g48610",{"v":10.81,"d":"10.8100"},{"v":59.07,"d":"59.0700"},{"v":5.464384828862165,"d":"5.4644"}]
[null,"Os05g0559900","LOC_Os05g48620",{"v":2430.17,"d":"2430.1700"},{"v":3147.13,"d":"3147.1300"},{"v":1.2950246279066897,"d":"1.2950"}]
[null,"Os05g0560000","LOC_Os05g48630",{"v":242.43,"d":"242.4300"},{"v":451.64,"d":"451.6400"},{"v":1.862970754444582,"d":"1.8630"}]
[null,"Os05g0560100","LOC_Os05g48640",{"v":289.38,"d":"289.3800"},{"v":13.61,"d":"13.6100"},{"v":0.047031584767433826,"d":"0.0470"}]
[null,"Os05g0560200","LOC_Os05g48650",{"v":339.82,"d":"339.8200"},{"v":88.69,"d":"88.6900"},{"v":0.26099111294214583,"d":"0.2610"}]
[null,"Os05g0560300","LOC_Os05g48660",{"v":646.82,"d":"646.8200"},{"v":198.86,"d":"198.8600"},{"v":0.3074425651649609,"d":"0.3074"}]
[null,"Os05g0560400","LOC_Os05g48670",{"v":420.85,"d":"420.8500"},{"v":203.24,"d":"203.2400"},{"v":0.48292740881549245,"d":"0.4829"}]
[null,"Os05g0560500","LOC_Os05g48680",{"v":2797.73,"d":"2797.7300"},{"v":1950.42,"d":"1950.4200"},{"v":0.6971437558306198,"d":"0.6971"}]
[null,"Os05g0560600","LOC_Os05g48690",{"v":3288.96,"d":"3288.9600"},{"v":1279.99,"d":"1279.9900"},{"v":0.38917773399494066,"d":"0.3892"}]
[null,"Os05g0560750","——","N/A","N/A","N/A"]
[null,"Os05g0560900","LOC_Os05g48700",{"v":61.81,"d":"61.8100"},{"v":106.99,"d":"106.9900"},{"v":1.7309496845170682,"d":"1.7309"}]
[null,"Os05g0561400","LOC_Os05g48740","N/A","N/A","N/A"]
[null,"Os05g0561500","LOC_Os05g48750",{"v":4508.24,"d":"4508.2400"},{"v":9668.22,"d":"9668.2200"},{"v":2.1445663939807997,"d":"2.1446"}]
[null,"Os05g0561600","LOC_Os05g48760","N/A","N/A","N/A"]
[null,"Os05g0562000","LOC_Os05g48790",{"v":68.43,"d":"68.4300"},{"v":82.99,"d":"82.9900"},{"v":1.2127721759462222,"d":"1.2128"}]
[null,"Os05g0562200","LOC_Os05g48800",{"v":7797.29,"d":"7797.2900"},{"v":23293.65,"d":"23293.6500"},{"v":2.9874033157674016,"d":"2.9874"}]
[null,"Os05g0562300","LOC_Os05g48810",{"v":458.45,"d":"458.4500"},{"v":2769.94,"d":"2769.9400"},{"v":6.041967499182027,"d":"6.0420"}]
[null,"Os05g0562350","——","N/A","N/A","N/A"]
[null,"Os05g0562400","LOC_Os05g48820",{"v":1096.68,"d":"1096.6800"},{"v":937.08,"d":"937.0800"},{"v":0.8544698544698545,"d":"0.8545"}]
[null,"Os05g0562800","LOC_Os05g48840",{"v":499.4,"d":"499.4000"},{"v":44.47,"d":"44.4700"},{"v":0.08904685622747296,"d":"0.0890"}]
[null,"Os05g0563000","LOC_Os05g48850",{"v":155.75,"d":"155.7500"},{"v":12.45,"d":"12.4500"},{"v":0.07993579454253612,"d":"0.0799"}]
[null,"Os05g0563050","LOC_Os05g48855",{"v":1214.9,"d":"1214.9000"},{"v":2206.25,"d":"2206.2500"},{"v":1.8159930858506872,"d":"1.8160"}]
[null,"Os05g0563100","LOC_Os05g48860",{"v":55.12,"d":"55.1200"},{"v":180.43,"d":"180.4300"},{"v":3.273403483309144,"d":"3.2734"}]
["S6_ 20797781","Os06g0547400","LOC_Os06g35520",{"v":22951.45,"d":"22951.4500"},{"v":24965,"d":"24965.0000"},{"v":1.0877308405351296,"d":"1.0877"}]
[null,"Os06g0547900","LOC_Os06g35530",{"v":5771.92,"d":"5771.9200"},{"v":4107.78,"d":"4107.7800"},{"v":0.7116834606162247,"d":"0.7117"}]
[null,"Os06g0548000","LOC_Os06g35540",{"v":2565.97,"d":"2565.9700"},{"v":6006.92,"d":"6006.9200"},{"v":2.340993854176004,"d":"2.3410"}]
[null,"Os06g0548100","LOC_Os06g35550",{"v":2.95,"d":"2.9500"},{"v":39.62,"d":"39.6200"},{"v":13.43050847457627,"d":"13.4305"}]
[null,"Os06g0548150","——","N/A","N/A","N/A"]
[null,"Os06g0548200","LOC_Os06g35560",{"v":254.43,"d":"254.4300"},{"v":1184.76,"d":"1184.7600"},{"v":4.656526353024407,"d":"4.6565"}]
[null,"Os06g0549300","LOC_Os06g35630",{"v":4303.45,"d":"4303.4500"},{"v":396.59,"d":"396.5900"},{"v":0.0921562932066133,"d":"0.0922"}]
[null,"Os06g0549600","LOC_Os06g35650",{"v":259.68,"d":"259.6800"},{"v":330.59,"d":"330.5900"},{"v":1.27306685150955,"d":"1.2731"}]
[null,"Os06g0549633","LOC_Os06g35660",{"v":21.07,"d":"21.0700"},{"v":24.16,"d":"24.1600"},{"v":1.1466540104413858,"d":"1.1467"}]
[null,"Os06g0549700","LOC_Os06g35670",{"v":491,"d":"491.0000"},{"v":539.09,"d":"539.0900"},{"v":1.0979429735234216,"d":"1.0979"}]
[null,"Os06g0549900","LOC_Os06g35700",{"v":599.49,"d":"599.4900"},{"v":115.17,"d":"115.1700"},{"v":0.19211329630185658,"d":"0.1921"}]
[null,"Os06g0550000","LOC_Os06g35730",{"v":1362.69,"d":"1362.6900"},{"v":1827.07,"d":"1827.0700"},{"v":1.3407818359274668,"d":"1.3408"}]
[null,"Os06g0550800","LOC_Os06g35770","N/A","N/A","N/A"]
[null,"Os06g0551000","——","N/A","N/A","N/A"]
[null,"Os06g0551400","LOC_Os06g35814",{"v":3299.45,"d":"3299.4500"},{"v":4087.4,"d":"4087.4000"},{"v":1.2388125293609542,"d":"1.2388"}]
["S7_ 18722403","Os07g0496900","LOC_Os07g31440",{"v":514.02,"d":"514.0200"},{"v":359.5,"d":"359.5000"},{"v":0.6993891288276721,"d":"0.6994"}]
[null,"Os07g0497000","——","N/A","N/A","N/A"]
[null,"Os07g0497100","LOC_Os07g31450",{"v":327.78,"d":"327.7800"},{"v":305.16,"d":"305.1600"},{"v":0.9309902983708587,"d":"0.9310"}]
[null,"Os07g0497400","LOC_Os07g31460",{"v":2252.1,"d":"2252.1000"},{"v":1850.1,"d":"1850.1000"},{"v":0.8214999333954975,"d":"0.8215"}]
[null,"Os07g0497500","LOC_Os07g31470",{"v":10.28,"d":"10.2800"},{"v":35.92,"d":"35.9200"},{"v":3.494163424124514,"d":"3.4942"}]
[null,"Os07g0498300","LOC_Os07g31490",{"v":8626.49,"d":"8626.4900"},{"v":4986.27,"d":"4986.2700"},{"v":0.5780184060956427,"d":"0.5780"}]
[null,"Os07g0498400","LOC_Os07g31500",{"v":380.69,"d":"380.6900"},{"v":81.77,"d":"81.7700"},{"v":0.21479418949801676,"d":"0.2148"}]
[null,"Os07g0498800","LOC_Os07g31540",{"v":1024.64,"d":"1024.6400"},{"v":1174.99,"d":"1174.9900"},{"v":1.1467344628357277,"d":"1.1467"}]
[null,"Os07g0498900","LOC_Os07g31550",{"v":163.2,"d":"163.2000"},{"v":251.73,"d":"251.7300"},{"v":1.5424632352941177,"d":"1.5425"}]
[null,"Os07g0499300","LOC_Os07g31599",{"v":474.14,"d":"474.1400"},{"v":519.62,"d":"519.6200"},{"v":1.095921035980934,"d":"1.0959"}]
[null,"Os07g0499500","LOC_Os07g31610",{"v":13.07,"d":"13.0700"},{"v":51.29,"d":"51.2900"},{"v":3.9242540168324407,"d":"3.9243"}]
[null,"Os07g0499800","LOC_Os07g31650",{"v":338.81,"d":"338.8100"},{"v":472.04,"d":"472.0400"},{"v":1.3932292435288216,"d":"1.3932"}]
["S8_ 9946213","Os08g0262500","LOC_Os08g16260",{"v":73.43,"d":"73.4300"},{"v":29.14,"d":"29.1400"},{"v":0.39684052839438916,"d":"0.3968"}]
["S11_ 19165397","Os11g0525600","LOC_Os11g32260",{"v":3845.61,"d":"3845.6100"},{"v":1175.48,"d":"1175.4800"},{"v":0.3056680214582342,"d":"0.3057"}]
[null,"Os11g0525700","LOC_Os11g32270",{"v":183.58,"d":"183.5800"},{"v":133.28,"d":"133.2800"},{"v":0.7260050114391545,"d":"0.7260"}]
[null,"Os11g0525800","LOC_Os11g32280",{"v":16.18,"d":"16.1800"},{"v":45.47,"d":"45.4700"},{"v":2.810259579728059,"d":"2.8103"}]
[null,"Os11g0525900","LOC_Os11g32290","N/A","N/A","N/A"]
[null,"Os11g0526000","——","N/A","N/A","N/A"]
[null,"Os11g0526200","LOC_Os11g32320",{"v":783.39,"d":"783.3900"},{"v":562.77,"d":"562.7700"},{"v":0.718377819476889,"d":"0.7184"}]
[null,"Os11g0526800","LOC_Os11g32360",{"v":237.5,"d":"237.5000"},{"v":439.27,"d":"439.2700"},{"v":1.849557894736842,"d":"1.8496"}]
[null,"Os11g0527000","LOC_Os11g32380",{"v":34.04,"d":"34.0400"},{"v":58.13,"d":"58.1300"},{"v":1.7076968272620447,"d":"1.7077"}]
[null,"Os11g0527100","LOC_Os11g32390",{"v":194.11,"d":"194.1100"},{"v":345.38,"d":"345.3800"},{"v":1.7793003966822933,"d":"1.7793"}]
[null,"Os11g0527150","——","N/A","N/A","N/A"]
[null,"Os11g0527300","LOC_Os11g32410",{"v":219.75,"d":"219.7500"},{"v":515.37,"d":"515.3700"},{"v":2.3452559726962456,"d":"2.3453"}]
[null,"Os11g0528200","LOC_Os11g32470",{"v":967.93,"d":"967.9300"},{"v":611.37,"d":"611.3700"},{"v":0.6316262539646462,"d":"0.6316"}]
[null,"Os11g0528300","LOC_Os11g32480",{"v":2149.86,"d":"2149.8600"},{"v":1233.61,"d":"1233.6100"},{"v":0.5738094573600141,"d":"0.5738"}]
[null,"Os11g0528400","LOC_Os11g32490",{"v":46.58,"d":"46.5800"},{"v":31.27,"d":"31.2700"},{"v":0.6713181623014169,"d":"0.6713"}]
[null,"Os11g0528500","LOC_Os11g32500",{"v":317.6,"d":"317.6000"},{"v":590.4,"d":"590.4000"},{"v":1.8589420654911837,"d":"1.8589"}]
[null,"Os11g0528700","LOC_Os11g32520",{"v":17.91,"d":"17.9100"},{"v":15.57,"d":"15.5700"},{"v":0.8693467336683417,"d":"0.8693"}]
[null,"Os11g0529550","——","N/A","N/A","N/A"]
[null,"Os11g0529900","LOC_Os11g32620",{"v":5.38,"d":"5.3800"},{"v":16.46,"d":"16.4600"},{"v":3.059479553903346,"d":"3.0595"}]
[]
["Note: a and b indicate the expression levels in aerobic and anaerobic environment respectively. Meanwhile, data derived from the public expression chip of Lasanthi - Kudahettige et al. (2007)"]
["—— Means that there is no MUS ID, and N/A means that there is no data under the processing."]