cu_20230712_YS_BJSK_287_down_0

Table 1 Crystal data and structure refinement for cu_20230712_YS_BJSK_287_down_0.
Identification code cu_20230712_YS_BJSK_287_down_0
Empirical formula C18H24Cl2N2O2
Formula weight 371.29
Temperature/K 200.00
Crystal system trigonal
Space group R-3
a/Å 25.6161(14)
b/Å 25.6161(14)
c/Å 16.3068(13)
α/° 90
β/° 90
γ/° 120
Volume/Å3 9266.7(13)
Z 18
ρcalcg/cm3 1.198
μ/mm‑1 2.927
F(000) 3528.0
Crystal size/mm3 0.14 × 0.12 × 0.11
Radiation CuKα (λ = 1.54178)
2Θ range for data collection/° 11.562 to 136.792
Index ranges -30 ≤ h ≤ 27, -30 ≤ k ≤ 30, -19 ≤ l ≤ 18
Reflections collected 11974
Independent reflections 3752 [Rint = 0.0841, Rsigma = 0.0645]
Data/restraints/parameters 3752/0/220
Goodness-of-fit on F2 1.034
Final R indexes [I>=2σ (I)] R1 = 0.0741, wR2 = 0.2047
Final R indexes [all data] R1 = 0.1152, wR2 = 0.2383
Largest diff. peak/hole / e Å-3 1.13/-0.46

 

Table 2 Fractional Atomic Coordinates (×104) and Equivalent Isotropic Displacement Parameters (Å2×103) for cu_20230712_YS_BJSK_287_down_0. Ueq is defined as 1/3 of the trace of the orthogonalised UIJ tensor.
AtomxyzU(eq)
Cl(1)6222.3(10)4710.3(11)3531.7(12)129.6(7)
Cl(2)6978.6(9)5394.3(11)4898.2(11)139.0(9)
C(18)6534(3)5373(4)4086(4)109(2)
O(1)6655.4(12)6690.9(13)2733.4(17)60.0(7)
O(2)5802.5(13)5885.3(12)5075.6(18)65.2(8)
N(1)6164.4(14)6578.2(14)1507(2)54.1(8)
N(2)5828.1(13)6860.9(13)4079.6(18)50.0(7)
C(1)5669.4(16)6626.3(16)1230(2)51.6(8)
C(2)5421.2(19)6528.2(17)452(3)59.2(10)
C(3)4926.0(19)6599.5(18)344(3)62.0(10)
C(4)4685.7(18)6765.4(17)987(3)60.0(10)
C(5)4946.4(17)6870.2(16)1763(2)53.3(9)
C(6)5437.9(16)6800.8(15)1879(2)48.4(8)
C(7)5812.3(15)6883.5(15)2628(2)46.7(8)
C(8)6264.4(16)6704.7(16)2319(2)51.3(9)
C(9)6148.1(18)7541.2(15)2975(2)54.1(9)
C(10)5995(2)7483.9(17)3891(3)61.1(10)
C(11)5514.3(19)6653.2(18)4868(2)58.9(10)
C(12)5305.8(18)5989.8(18)4992(3)61.4(10)
C(13)4937.8(18)5613.9(19)4271(2)59.9(10)
C(14)5282.7(16)5849.7(15)3461(2)49.8(8)
C(15)5448.7(15)6505.9(14)3389(2)45.6(8)
C(16)4918.6(17)5464.5(16)2727(2)54.2(9)
C(17)4785(2)4819.3(18)2772(3)71.1(12)

 

Table 3 Anisotropic Displacement Parameters (Å2×103) for cu_20230712_YS_BJSK_287_down_0. The Anisotropic displacement factor exponent takes the form: -2π2[h2a*2U11+2hka*b*U12+…].
AtomU11U22U33U23U13U12
Cl(1)130.6(15)160.3(17)100.1(12)-5.4(11)-15.8(10)74.3(13)
Cl(2)127.5(15)160.1(17)91.3(11)28.9(11)-20.1(9)43.3(13)
C(18)116(5)141(6)91(4)10(4)-3(3)80(4)
O(1)50.6(14)69.7(17)63.7(16)1.3(13)1.6(12)33.2(13)
O(2)67.9(17)52.4(15)65.4(17)-0.1(12)-14.7(13)22.7(13)
N(1)55.0(17)56.5(17)56.7(19)4.3(14)9.1(14)32.3(15)
N(2)53.1(16)42.8(15)49.9(16)1.1(12)5.4(13)20.8(13)
C(1)51(2)48.0(19)56(2)3.9(16)3.7(16)24.9(16)
C(2)68(2)54(2)58(2)-4.5(17)-2.5(18)32.0(19)
C(3)67(2)54(2)60(2)-1.9(18)-5.7(19)26.4(19)
C(4)55(2)52(2)74(3)7.5(18)-1.0(19)27.8(18)
C(5)55(2)49.0(19)58(2)4.1(16)3.2(17)27.1(17)
C(6)51.5(19)40.7(17)52.3(19)5.0(14)5.2(15)22.5(15)
C(7)44.5(17)43.0(17)52.3(19)2.8(14)2.9(15)21.7(15)
C(8)46.5(19)45.2(18)60(2)5.9(16)7.1(16)21.2(15)
C(9)58(2)39.9(17)63(2)2.9(16)2.1(17)23.8(16)
C(10)74(3)48(2)65(2)-2.6(17)0(2)33.0(19)
C(11)63(2)62(2)52(2)-0.3(17)8.0(17)30.9(19)
C(12)53(2)57(2)59(2)10.0(18)4.4(17)16.8(18)
C(13)49(2)58(2)59(2)8.3(18)-2.1(17)16.3(17)
C(14)45.2(18)40.5(18)57(2)4.4(15)-2.8(15)16.5(15)
C(15)43.2(17)41.4(17)52.6(19)0.1(14)1.7(14)21.4(14)
C(16)51(2)43.0(18)57(2)4.0(15)-8.8(16)15.8(16)
C(17)77(3)44(2)84(3)-9.4(19)-26(2)24.3(19)

 

Table 4 Bond Lengths for cu_20230712_YS_BJSK_287_down_0.
AtomAtomLength/Å AtomAtomLength/Å
Cl(1)C(18)1.727(8) C(4)C(5)1.393(6)
Cl(2)C(18)1.730(7) C(5)C(6)1.370(5)
O(1)C(8)1.223(5) C(6)C(7)1.501(5)
O(2)C(12)1.432(5) C(7)C(8)1.528(5)
N(1)C(1)1.409(5) C(7)C(9)1.565(5)
N(1)C(8)1.357(5) C(7)C(15)1.562(5)
N(2)C(10)1.463(5) C(9)C(10)1.532(6)
N(2)C(11)1.468(5) C(11)C(12)1.519(6)
N(2)C(15)1.468(5) C(12)C(13)1.514(6)
C(1)C(2)1.383(6) C(13)C(14)1.535(6)
C(1)C(6)1.392(5) C(14)C(15)1.518(5)
C(2)C(3)1.381(6) C(14)C(16)1.534(5)
C(3)C(4)1.386(6) C(16)C(17)1.513(5)

 

Table 5 Bond Angles for cu_20230712_YS_BJSK_287_down_0.
AtomAtomAtomAngle/˚ AtomAtomAtomAngle/˚
Cl(1)C(18)Cl(2)113.9(4) C(8)C(7)C(15)112.5(3)
C(8)N(1)C(1)111.3(3) C(15)C(7)C(9)102.5(3)
C(10)N(2)C(11)112.9(3) O(1)C(8)N(1)126.3(3)
C(10)N(2)C(15)104.8(3) O(1)C(8)C(7)125.5(3)
C(11)N(2)C(15)112.0(3) N(1)C(8)C(7)108.2(3)
C(2)C(1)N(1)129.1(3) C(10)C(9)C(7)105.8(3)
C(2)C(1)C(6)121.6(3) N(2)C(10)C(9)103.4(3)
C(6)C(1)N(1)109.3(3) N(2)C(11)C(12)110.2(3)
C(3)C(2)C(1)117.6(4) O(2)C(12)C(11)112.0(3)
C(2)C(3)C(4)121.5(4) O(2)C(12)C(13)106.5(4)
C(3)C(4)C(5)120.2(4) C(13)C(12)C(11)111.6(3)
C(6)C(5)C(4)118.9(4) C(12)C(13)C(14)111.4(3)
C(1)C(6)C(7)108.6(3) C(15)C(14)C(13)106.8(3)
C(5)C(6)C(1)120.2(3) C(15)C(14)C(16)113.3(3)
C(5)C(6)C(7)131.1(3) C(16)C(14)C(13)111.9(3)
C(6)C(7)C(8)102.5(3) N(2)C(15)C(7)102.7(3)
C(6)C(7)C(9)114.5(3) N(2)C(15)C(14)111.0(3)
C(6)C(7)C(15)114.7(3) C(14)C(15)C(7)119.8(3)
C(8)C(7)C(9)110.5(3) C(17)C(16)C(14)113.4(3)

 

Table 6 Torsion Angles for cu_20230712_YS_BJSK_287_down_0.
ABCDAngle/˚ ABCDAngle/˚
O(2)C(12)C(13)C(14)-67.7(4) C(8)N(1)C(1)C(6)1.0(4)
N(1)C(1)C(2)C(3)179.2(4) C(8)C(7)C(9)C(10)-115.8(3)
N(1)C(1)C(6)C(5)-179.1(3) C(8)C(7)C(15)N(2)89.2(3)
N(1)C(1)C(6)C(7)1.1(4) C(8)C(7)C(15)C(14)-34.4(4)
N(2)C(11)C(12)O(2)66.0(4) C(9)C(7)C(8)O(1)59.3(4)
N(2)C(11)C(12)C(13)-53.3(5) C(9)C(7)C(8)N(1)-119.4(3)
C(1)N(1)C(8)O(1)178.8(3) C(9)C(7)C(15)N(2)-29.5(3)
C(1)N(1)C(8)C(7)-2.6(4) C(9)C(7)C(15)C(14)-153.1(3)
C(1)C(2)C(3)C(4)0.2(6) C(10)N(2)C(11)C(12)175.1(3)
C(1)C(6)C(7)C(8)-2.4(4) C(10)N(2)C(15)C(7)45.8(3)
C(1)C(6)C(7)C(9)117.3(3) C(10)N(2)C(15)C(14)175.0(3)
C(1)C(6)C(7)C(15)-124.6(3) C(11)N(2)C(10)C(9)-165.0(3)
C(2)C(1)C(6)C(5)1.1(5) C(11)N(2)C(15)C(7)168.5(3)
C(2)C(1)C(6)C(7)-178.7(3) C(11)N(2)C(15)C(14)-62.3(4)
C(2)C(3)C(4)C(5)0.6(6) C(11)C(12)C(13)C(14)54.7(5)
C(3)C(4)C(5)C(6)-0.6(6) C(12)C(13)C(14)C(15)-56.6(4)
C(4)C(5)C(6)C(1)-0.2(5) C(12)C(13)C(14)C(16)178.9(3)
C(4)C(5)C(6)C(7)179.5(4) C(13)C(14)C(15)N(2)59.9(4)
C(5)C(6)C(7)C(8)177.8(4) C(13)C(14)C(15)C(7)179.4(3)
C(5)C(6)C(7)C(9)-62.5(5) C(13)C(14)C(16)C(17)-62.7(5)
C(5)C(6)C(7)C(15)55.6(5) C(15)N(2)C(10)C(9)-42.9(4)
C(6)C(1)C(2)C(3)-1.1(6) C(15)N(2)C(11)C(12)57.0(4)
C(6)C(7)C(8)O(1)-178.3(3) C(15)C(7)C(8)O(1)-54.6(5)
C(6)C(7)C(8)N(1)3.0(3) C(15)C(7)C(8)N(1)126.7(3)
C(6)C(7)C(9)C(10)129.1(3) C(15)C(7)C(9)C(10)4.3(4)
C(6)C(7)C(15)N(2)-154.2(3) C(15)C(14)C(16)C(17)176.5(4)
C(6)C(7)C(15)C(14)82.2(4) C(16)C(14)C(15)N(2)-176.4(3)
C(7)C(9)C(10)N(2)22.5(4) C(16)C(14)C(15)C(7)-56.9(4)
C(8)N(1)C(1)C(2)-179.3(4)      

 

Table 7 Hydrogen Atom Coordinates (Å×104) and Isotropic Displacement Parameters (Å2×103) for cu_20230712_YS_BJSK_287_down_0.
AtomxyzU(eq)
H(18A)6204.435430.644300.31131
H(18B)6781.065713.583712.61131
H(2)6050.786131.065414.4798
H(1)6380.966478.81194.2765
H(2A)5585.66415.849.6471
H(3)4745.856533.33-183.3474
H(4)4342.276807.81897.9772
H(5)4785.846987.822204.7264
H(9A)6588.587727.672893.4365
H(9B)6008.017792.432696.1165
H(10A)6348.487772.074217.9373
H(10B)5655.937555.663997.6373
H(11A)5161.996714.184878.8771
H(11B)5788.926891.865319.1471
H(12)5052.745845.375498.3274
H(13A)4555.925622.014241.7172
H(13B)4836.425190.454352.3772
H(14)5663.835833.143498.1560
H(15)5066.46520.853414.655
H(16A)4532.925465.122697.2665
H(16B)5145.655650.522217.0365
H(17A)4604.944613.842254.05107
H(17B)4503.824611.123222.84107
H(17C)5160.774814.922867.86107

 

Table 8 Solvent masks information for cu_20230712_YS_BJSK_287_down_0.
NumberXYZVolumeElectron countContent
10.0000.000-0.213494.837.6?
20.3330.6670.972494.837.6?
30.6670.3330.638494.837.6?

Experimental

Single crystals of C18H24Cl2N2O2 [cu_20230712_YS_BJSK_287_down_0] were []. A suitable crystal was selected and [] on a Bruker D8 VENTURE diffractometer. The crystal was kept at 200.00 K during data collection. Using Olex2 [1], the structure was solved with the SHELXT [2] structure solution program using Intrinsic Phasing and refined with the SHELXL [3] refinement package using Least Squares minimisation.

  1. Dolomanov, O.V., Bourhis, L.J., Gildea, R.J, Howard, J.A.K. & Puschmann, H. (2009), J. Appl. Cryst. 42, 339-341.
  2. Sheldrick, G.M. (2015). Acta Cryst. A71, 3-8.
  3. Sheldrick, G.M. (2015). Acta Cryst. C71, 3-8.

Crystal structure determination of [cu_20230712_YS_BJSK_287_down_0]

Crystal Data for C18H24Cl2N2O2 (=371.29 g/mol): trigonal, space group R-3 (no. 148), a = 25.6161(14) Å, c = 16.3068(13) Å, = 9266.7(13) Å3, Z = 18, T = 200.00 K, μ(CuKα) = 2.927 mm-1, Dcalc = 1.198 g/cm3, 11974 reflections measured (11.562° ≤ 2Θ ≤ 136.792°), 3752 unique (Rint = 0.0841, Rsigma = 0.0645) which were used in all calculations. The final R1 was 0.0741 (I > 2σ(I)) and wR2 was 0.2383 (all data).

Refinement model description

Number of restraints - 0, number of constraints - unknown.

Details:

1. Fixed Uiso
At 1.2 times of:
All C(H) groups, All C(H,H) groups, All N(H) groups
At 1.5 times of:
All C(H,H,H) groups, All O(H) groups
2.a Ternary CH refined with riding coordinates:
C12(H12), C14(H14), C15(H15)
2.b Secondary CH2 refined with riding coordinates:
C18(H18A,H18B), C9(H9A,H9B), C10(H10A,H10B), C11(H11A,H11B), C13(H13A,H13B),
C16(H16A,H16B)
2.c Aromatic/amide H refined with riding coordinates:
N1(H1), C2(H2A), C3(H3), C4(H4), C5(H5)
2.d Idealised Me refined as rotating group:
C17(H17A,H17B,H17C)
2.e Idealised tetrahedral OH refined as rotating group:
O2(H2)

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